Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005883

Physical Location & Seq

Genomic Coordinates Reverse (-)

15973751 .. 15982387

Gene Structure 8637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0117200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGCAGTCTCTGAAAGAGGCTCTCATCCCCCAAGTTCAATCCATAAAATCTGGTTTAACACTGGGTATTTTCACCTCCAACCAACTCATCCACCTGTACTCCAGACATGGTCTCATTCAAGACGCCCAGAAGCTGTTCTACGAAATGCCCCACCGAAACGTCTACTCTTGGAACGCCATAATCTCCACCCACATCAGATCACGCAACTTGGAACGAGCCCGGCAGCTATTCGACTCTGCTTCTTTCAAAGATTTGGTCACTTACAACTCTATGCTCTCTGGCTACACAAGCACAGAAGGGTACGAGGCTTGTGCGCTTGGGTTGTTTGCCGAAATGCAGTCGCGGGATGATCGGATTAGAGTTGATGAGGTTACTCTAACTACCATGCTTAACTTGAGTGCCAAGTTAGAGGTGGTTTGTTATGGAAAGCAGTTGCATTCGTGTATGGTGAGAACTGCCAATGATGTGAGTGGGTTCGCGGTGAGCTCGTTAATTGATATGTACTCTAAGTGCGGGTGTTTTCGTGATGCGTGGCGCGTGTTTAGTGGATATAGAGGGATGGTTGACTCGGTTTCAAAGAATGCAATGGTGGCAGCTTGTTGTAGAGAAGGAAATTTGGATATGGCGGTTGATCTTTTTTGGAGAGAACCGGAGATTAACGATACTGTGTCTTGGAACACAATGATTTCAGGGTATGTGCAGAATGGTTTTGTAGAGGAGGGACTGAATTTGTTTGTTCGCATGGCGGAAGATGGATTTCGATGGAATGAGCATACTTTTGCTAGTGTTTTGAGTGCTTGCTCTGGTTTGAGGAACTTCAGACTAGGAAAGGAAGTCCATGGTTGGGTGTTGAAGAATGCGATGAGTTCTAATCCGTTTATAAGTAGCGGCATTGTTGATGTCTATTGCAAGTGTGGAAATATGAGTTATGCAAAGTCAGTTCATGCAGCAATGGGAATTAGAAATTCGTTTTCAATCACTTCATTGATCTCGGGTCATGCCTCTCAAGGTAACCTAGTAGAAGCAAGGTTGCTTTTTGATTCATTGGCTGAAAGGAGTATGGTTGTATGGACAGCTTTGTTTTCTGGATATCTCAAATCACAACAATTTGAAGCTGTATTTAAGCTTTTGAGCGAGTTCAGGGAAAAGGAAGTAATTGTTCCTGATGCTTTGATTCTCATTAGTGTGCTTGCTGCCTGTGCAATTCAAGCTGCCCTGGACCCTGGGAAGCAGATTCATGCTTACATCTTGAGGAATAACATTGAAGTAGACAAGAAATTGTTCAGTGCTTTGATTGATATGTACTCAAAATCTGGGAATATTACTTATGCGGAAAAGATTTTTAAAAGTGTTTTTGACAGAGATATAATCGTTTACAATGTGATATTAGCTGGTTACGCTCACCATGGTTGTGAAACTAAAGCTATCCAAATCTTCAAAGAACTGTTGAAGAGAGGTATTAGGCCTGATGCAGTCACATTTTTAGCACTTCTTTCAGCTTGTCGTCACTCTTGTTTGGTGGAATTGGGTGAGCAATTTTTCTGGTCCATGACAAAAGATTATAACCTATTGCCTGAACTGGATCACTATGCATGTATGATTGACTTGTATGGCAGGGCTGATCAACTTGAGAAGGCAAAAGCATTGATAAGAAATATCCGTATAGAATTGGATACCAGTGTATGGGGGGCATTCCTGAATGCTTGTCGGGTAAATGGAAATACAATACTTGCTAGAGAGGCAGAGGAGAGACTTCTAGAACTTGGAGGAGGTACTGGTGATCGGTATGTGCAGTTGGCTAATTTCTATGCTGCTGAGGGAAACTGGAAGGAGGTTGGGAGATTAAGGAAGAAGATGAAAGGGAAAGAGGTCAAGAAGACTGCTGGTTGCAGTTGGTTATATGTGGATAATGGAGTTCATATATTTATTTCTGGTGATAAAAGTCACCCAAAAACAGAGAATATATATTTTACCTTAGCATCCTTGACTGAAGAGCTATATCAGATATCTGGGGAATCTATTGAGGTCATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

678

Amino Acids

76.23

Weight (kDa)

6.96

Isoelectric Point (pI)

36.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	221 - 267	4.8e-10	PPR repeat family
PPR	PF01535	223 - 253	5.9e-09	PPR repeat
PPR_2	PF13041	455 - 501	2.3e-10	PPR repeat family
PPR_3	PF13812	455 - 501	2.9e-06	Pentatricopeptide repeat domain
E_motif	PF20431	577 - 633	1.2e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005883)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16920 AT2G16920
fragaria_vesca	FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490 FvH4_2g15490
malus_domestica	MD05G1123200.v1.1 MD10G1126200.v1.1
prunus_persica	Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1 Prupe.8G167100_v2.0.a1
pyrus_communis	pycom05g11760 pycom10g10840
rosa_chinensis	RchiOBHm_Chr6g0278491
rosa_laevigata	RLG00000013224
rosa_multiflora	Rmu_sc0000258.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189850 Rroxscaffold_7G00190340
rosa_rugosa	Rorug06G0117200 Rorug06G0117200
rosa_samantha	Rh6AG226500 Rh6BG230700 Rh6CG233800 Rh6DG225100
rosa_wichuraiana	Rw6G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	881, 1563
AccB7I	CCANNNNNTGG	1 cut(s)	1683
AccI	GTMKAC	2 cut(s)	162, 1269
AccII	CGCG	3 cut(s)	343, 479, 537
AciI	CCGC	7 cut(s)	343, 479, 513, 626, 746, 888, 1331
AclWI	GGATC	1 cut(s)	1590
AcsI	RAATTY	3 cut(s)	613, 727, 964
AcuI	CTGAAG	2 cut(s)	802, 2010
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	5 cut(s)	98, 302, 503, 1304, 1774
AfiI	CCNNNNNNNGG	2 cut(s)	844, 1683
AjnI	CCWGG	2 cut(s)	1215, 1222
Alw21I	GWGCWC	1 cut(s)	488
Alw26I	GTCTC	3 cut(s)	12, 116, 1744
AlwI	GGATC	1 cut(s)	1590
AlwNI	CAGNNNCTG	2 cut(s)	10, 133
Ama87I	CYCGRG	1 cut(s)	991
AoxI	GGCC	1 cut(s)	1463
ApeKI	GCWGC	6 cut(s)	223, 593, 947, 1193, 1211, 1811
ApoI	RAATTY	3 cut(s)	613, 727, 964
ArsI	GACNNNNNNTTYG	2 cut(s)	240, 272
Asp700I	GAANNNNTTC	2 cut(s)	134, 1280
AspLEI	GCGC	2 cut(s)	316, 537
AspS9I	GGNCC	2 cut(s)	1219, 1545
AsuC2I	CCSGG	1 cut(s)	220
AsuHPI	GGTGA	8 cut(s)	64, 460, 493, 1394, 1541, 1790, 1937, 1946
AvaI	CYCGRG	1 cut(s)	991
AvaII	GGWCC	2 cut(s)	1219, 1545
BaeI	ACNNNNGTAYC	2 cut(s)	1665, 1698
BanII	GRGCYC	2 cut(s)	220, 488
BarI	GAAGNNNNNNTAC	2 cut(s)	122, 154
BbsI	GAAGAC	1 cut(s)	1883
Bbv12I	GWGCWC	1 cut(s)	488
BbvCI	CCTCAGC	1 cut(s)	1815
BbvI	GCAGC	6 cut(s)	235, 605, 959, 1180, 1198, 1798
BccI	CCATC	3 cut(s)	553, 746, 756
BcgI	CGANNNNNNTGC	2 cut(s)	293, 327
BciT130I	CCWGG	2 cut(s)	1217, 1224
BciVI	GTATCC	1 cut(s)	1666
BclI	TGATCA	1 cut(s)	1621
BcnI	CCSGG	1 cut(s)	220
BcoDI	GTCTC	3 cut(s)	12, 116, 1744
BfaI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
BfuI	GTATCC	1 cut(s)	1666
BisI	GCNGC	7 cut(s)	224, 594, 889, 948, 1194, 1212, 1812
BlsI	GCNGC	7 cut(s)	225, 595, 890, 949, 1195, 1213, 1813
Bme1390I	CCNGG	3 cut(s)	220, 1217, 1224
Bme18I	GGWCC	2 cut(s)	1219, 1545
BmeT110I	CYCGRG	1 cut(s)	991
BmgT120I	GGNCC	2 cut(s)	1219, 1545
BmiI	GGNNCC	1 cut(s)	1221
BmrFI	CCNGG	3 cut(s)	220, 1217, 1224
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	4 cut(s)	517, 1156, 1459, 1988
BmuI	ACTGGG	1 cut(s)	71
BpiI	GAAGAC	1 cut(s)	1883
BpmI	CTGGAG	1 cut(s)	85
Bpu10I	CCTNAGC	2 cut(s)	1815, 1975
BpuEI	CTTGAG	4 cut(s)	415, 990, 1270, 1649
BpuMI	CCSGG	1 cut(s)	220
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	116
BsaJI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BsaWI	WCCGGW	1 cut(s)	649
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	2 cut(s)	844, 1683
Bse1I	ACTGG	5 cut(s)	66, 1584, 1677, 1780, 1829
Bse3DI	GCAATG	2 cut(s)	591, 957
BseBI	CCWGG	2 cut(s)	1217, 1224
BseDI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BseGI	GGATG	5 cut(s)	24, 87, 352, 564, 1979
BseLI	CCNNNNNNNGG	2 cut(s)	844, 1683
BseMI	GCAATG	2 cut(s)	591, 957
BseMII	CTCAG	1 cut(s)	1806
BseNI	ACTGG	5 cut(s)	66, 1584, 1677, 1780, 1829
BseRI	GAGGAG	3 cut(s)	731, 1760, 1782
BseXI	GCAGC	6 cut(s)	235, 605, 959, 1180, 1198, 1798
BsgI	GTGCAG	2 cut(s)	719, 1811
Bsh1236I	CGCG	3 cut(s)	343, 479, 537
BshFI	GGCC	1 cut(s)	1465
BsiHKAI	GWGCWC	1 cut(s)	488
BsiHKCI	CYCGRG	1 cut(s)	991
BsiSI	CCGG	2 cut(s)	220, 650
BslFI	GGGAC	1 cut(s)	735
BslI	CCNNNNNNNGG	2 cut(s)	844, 1683
BsmAI	GTCTC	3 cut(s)	12, 116, 1744
BsmFI	GGGAC	1 cut(s)	735
BsmI	GAATGC	5 cut(s)	436, 586, 862, 1691, 1705
BsnI	GGCC	1 cut(s)	1465
Bso31I	GGTCTC	1 cut(s)	116
BsoBI	CYCGRG	1 cut(s)	991
Bsp1286I	GDGCHC	2 cut(s)	220, 488
Bsp143I	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
Bsp19I	CCATGG	2 cut(s)	838, 1405
BspACI	CCGC	7 cut(s)	343, 479, 513, 626, 746, 888, 1331
BspANI	GGCC	1 cut(s)	1465
BspCNI	CTCAG	1 cut(s)	1807
BspFNI	CGCG	3 cut(s)	343, 479, 537
BspLI	GGNNCC	1 cut(s)	1221
BspPI	GGATC	1 cut(s)	1590
BspQI	GCTCTTC	1 cut(s)	1986
BspTNI	GGTCTC	1 cut(s)	116
BsrDI	GCAATG	2 cut(s)	591, 957
BsrI	ACTGG	5 cut(s)	66, 1584, 1677, 1780, 1829
BssECI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BssMI	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	838, 1405
Bst2UI	CCWGG	2 cut(s)	1217, 1224
Bst4CI	ACNGT	2 cut(s)	667, 1446
Bst6I	CTCTTC	2 cut(s)	1445, 1986
BstACI	GRCGYC	1 cut(s)	123
BstC8I	GCNNGC	2 cut(s)	799, 1191
BstDEI	CTNAG	3 cut(s)	507, 1815, 1975
BstDSI	CCRYGG	2 cut(s)	838, 1405
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	5 cut(s)	24, 87, 352, 564, 1979
BstFNI	CGCG	3 cut(s)	343, 479, 537
BstHHI	GCGC	2 cut(s)	316, 537
BstKTI	GATC	7 cut(s)	200, 352, 634, 990, 1585, 1624, 1783
BstMAI	GTCTC	3 cut(s)	12, 116, 1744
BstMBI	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
BstMWI	GCNNNNNNNGC	6 cut(s)	288, 590, 1199, 1208, 1397, 1739
BstNI	CCWGG	2 cut(s)	1217, 1224
BstNSI	RCATGY	1 cut(s)	1596
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	218, 1215, 1222
BstUI	CGCG	3 cut(s)	343, 479, 537
BstV1I	GCAGC	6 cut(s)	235, 605, 959, 1180, 1198, 1798
BstV2I	GAAGAC	1 cut(s)	1883
BsuI	GTATCC	1 cut(s)	1666
BsuRI	GGCC	1 cut(s)	1465
BtgI	CCRYGG	2 cut(s)	838, 1405
BtgZI	GCGATG	1 cut(s)	875
BtsCI	GGATG	5 cut(s)	24, 87, 352, 564, 1979
BtsIMutI	CAGTG	3 cut(s)	59, 1291, 1684
Cac8I	GCNNGC	2 cut(s)	799, 1191
CaiI	CAGNNNCTG	2 cut(s)	10, 133
CfoI	GCGC	2 cut(s)	316, 537
Cfr13I	GGNCC	2 cut(s)	1219, 1545
CseI	GACGC	1 cut(s)	131
Csp6I	GTAC	5 cut(s)	97, 301, 502, 1303, 1773
CviQI	GTAC	5 cut(s)	97, 301, 502, 1303, 1773
DdeI	CTNAG	3 cut(s)	507, 1815, 1975
DpnI	GATC	7 cut(s)	199, 351, 633, 989, 1584, 1623, 1782
DpnII	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
DraI	TTTAAA	1 cut(s)	1345
Eam1104I	CTCTTC	2 cut(s)	1445, 1986
EarI	CTCTTC	2 cut(s)	1445, 1986
EciI	GGCGGA	1 cut(s)	761
Ecl136II	GAGCTC	1 cut(s)	486
Eco130I	CCWWGG	2 cut(s)	838, 1405
Eco147I	AGGCCT	1 cut(s)	1465
Eco24I	GRGCYC	2 cut(s)	220, 488
Eco31I	GGTCTC	1 cut(s)	116
Eco32I	GATATC	2 cut(s)	1091, 2007
Eco47I	GGWCC	2 cut(s)	1219, 1545
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	2 cut(s)	802, 2010
Eco88I	CYCGRG	1 cut(s)	991
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	486
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRII	CCWGG	2 cut(s)	1215, 1222
EcoRV	GATATC	2 cut(s)	1091, 2007
EcoT14I	CCWWGG	2 cut(s)	838, 1405
EcoT22I	ATGCAT	1 cut(s)	1594
EcoT38I	GRGCYC	2 cut(s)	220, 488
ErhI	CCWWGG	2 cut(s)	838, 1405
FaqI	GGGAC	1 cut(s)	735
FauI	CCCGC	2 cut(s)	336, 506
FbaI	TGATCA	1 cut(s)	1621
FblI	GTMKAC	2 cut(s)	162, 1269
Fnu4HI	GCNGC	7 cut(s)	224, 594, 889, 948, 1194, 1212, 1812
FokI	GGATG	5 cut(s)	11, 74, 359, 571, 1966
FriOI	GRGCYC	2 cut(s)	220, 488
Fsp4HI	GCNGC	7 cut(s)	224, 594, 889, 948, 1194, 1212, 1812
FspBI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
GlaI	GCGC	2 cut(s)	315, 536
GluI	GCNGC	7 cut(s)	224, 594, 889, 948, 1194, 1212, 1812
GsuI	CTGGAG	1 cut(s)	85
HaeIII	GGCC	1 cut(s)	1465
HapII	CCGG	2 cut(s)	220, 650
HgaI	GACGC	1 cut(s)	131
HhaI	GCGC	2 cut(s)	316, 537
Hin1I	GRCGYC	1 cut(s)	123
Hin6I	GCGC	2 cut(s)	314, 535
HinP1I	GCGC	2 cut(s)	314, 535
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	1124
HinfI	GANTC	6 cut(s)	233, 566, 1040, 1174, 1234, 2015
HpaII	CCGG	2 cut(s)	220, 650
HphI	GGTGA	8 cut(s)	64, 460, 493, 1394, 1541, 1790, 1937, 1946
Hpy166II	GTNNAC	4 cut(s)	163, 565, 1270, 1375
Hpy188I	TCNGA	5 cut(s)	12, 197, 354, 821, 2004
Hpy188III	TCNNGA	9 cut(s)	102, 119, 524, 1086, 1163, 1249, 1696, 1757, 1873
Hpy8I	GTNNAC	4 cut(s)	163, 565, 1270, 1375
HpyAV	CCTTC	4 cut(s)	290, 602, 1627, 1822
HpyCH4III	ACNGT	2 cut(s)	667, 1446
HpyCH4IV	ACGT	1 cut(s)	159
HpyF10VI	GCNNNNNNNGC	6 cut(s)	288, 590, 1199, 1208, 1397, 1739
HpyF3I	CTNAG	3 cut(s)	507, 1815, 1975
HpySE526I	ACGT	1 cut(s)	159
Hsp92I	GRCGYC	1 cut(s)	123
HspAI	GCGC	2 cut(s)	314, 535
Ksp22I	TGATCA	1 cut(s)	1621
Kzo9I	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
LguI	GCTCTTC	1 cut(s)	1986
Lsp1109I	GCAGC	6 cut(s)	235, 605, 959, 1180, 1198, 1798
LweI	GCATC	4 cut(s)	517, 1156, 1459, 1988
MaeI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
MaeII	ACGT	1 cut(s)	159
MaeIII	GTNAC	7 cut(s)	256, 370, 1010, 1394, 1474, 1505, 1943
MalI	GATC	7 cut(s)	199, 351, 633, 989, 1584, 1623, 1782
MboI	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
MboII	GAAGA	8 cut(s)	761, 865, 1426, 1462, 1861, 1864, 1888, 2003
MhlI	GDGCHC	2 cut(s)	220, 488
MlyI	GAGTC	2 cut(s)	227, 560
MmeI	TCCRAC	1 cut(s)	102
Mph1103I	ATGCAT	1 cut(s)	1594
MroXI	GAANNNNTTC	2 cut(s)	134, 1280
MseI	TTAA	7 cut(s)	56, 390, 491, 657, 1122, 1344, 1844
MslI	CAYNNNNRTG	2 cut(s)	1184, 1410
MspI	CCGG	2 cut(s)	220, 650
MspR9I	CCNGG	3 cut(s)	220, 1217, 1224
Mva1269I	GAATGC	5 cut(s)	436, 586, 862, 1691, 1705
MvaI	CCWGG	2 cut(s)	1217, 1224
MvnI	CGCG	3 cut(s)	343, 479, 537
MwoI	GCNNNNNNNGC	6 cut(s)	288, 590, 1199, 1208, 1397, 1739
NciI	CCSGG	1 cut(s)	220
NcoI	CCATGG	2 cut(s)	838, 1405
NdeII	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
NlaIV	GGNNCC	1 cut(s)	1221
NmuCI	GTSAC	4 cut(s)	256, 1474, 1505, 1943
NsiI	ATGCAT	1 cut(s)	1594
NspI	RCATGY	1 cut(s)	1596
PasI	CCCWGGG	1 cut(s)	1223
PceI	AGGCCT	1 cut(s)	1465
PciSI	GCTCTTC	1 cut(s)	1986
PctI	GAATGC	5 cut(s)	436, 586, 862, 1691, 1705
PdmI	GAANNNNTTC	2 cut(s)	134, 1280
PfeI	GAWTC	4 cut(s)	1040, 1174, 1234, 2015
PflFI	GACNNNGTC	1 cut(s)	108
PflMI	CCANNNNNTGG	1 cut(s)	1683
PkrI	GCNGC	7 cut(s)	225, 595, 890, 949, 1195, 1213, 1813
PleI	GAGTC	2 cut(s)	227, 560
PpsI	GAGTC	2 cut(s)	227, 560
PsiI	TTATAA	2 cut(s)	881, 1563
Psp124BI	GAGCTC	1 cut(s)	488
Psp6I	CCWGG	2 cut(s)	1215, 1222
PspEI	GGTNACC	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	1215, 1222
PspN4I	GGNNCC	1 cut(s)	1221
PspPI	GGNCC	2 cut(s)	1219, 1545
PstNI	CAGNNNCTG	2 cut(s)	10, 133
PsyI	GACNNNGTC	1 cut(s)	108
RsaI	GTAC	5 cut(s)	98, 302, 503, 1304, 1774
RsaNI	GTAC	5 cut(s)	97, 301, 502, 1303, 1773
RseI	CAYNNNNRTG	2 cut(s)	1184, 1410
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	1986
SaqAI	TTAA	7 cut(s)	56, 390, 491, 657, 1122, 1344, 1844
SatI	GCNGC	7 cut(s)	224, 594, 889, 948, 1194, 1212, 1812
Sau3AI	GATC	7 cut(s)	197, 349, 631, 987, 1582, 1621, 1780
Sau96I	GGNCC	2 cut(s)	1219, 1545
SchI	GAGTC	2 cut(s)	227, 560
ScrFI	CCNGG	3 cut(s)	220, 1217, 1224
SduI	GDGCHC	2 cut(s)	220, 488
SfaNI	GCATC	4 cut(s)	517, 1156, 1459, 1988
SinI	GGWCC	2 cut(s)	1219, 1545
SmiMI	CAYNNNNRTG	2 cut(s)	1184, 1410
SmlI	CTYRAG	4 cut(s)	394, 1005, 1249, 1628
SmoI	CTYRAG	4 cut(s)	394, 1005, 1249, 1628
SseBI	AGGCCT	1 cut(s)	1465
SsiI	CCGC	7 cut(s)	343, 479, 513, 626, 746, 888, 1331
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
SstI	GAGCTC	1 cut(s)	488
StuI	AGGCCT	1 cut(s)	1465
StyD4I	CCNGG	3 cut(s)	218, 1215, 1222
StyI	CCWWGG	2 cut(s)	838, 1405
TaaI	ACNGT	2 cut(s)	667, 1446
TaiI	ACGT	1 cut(s)	162
TaqI	TCGA	2 cut(s)	231, 760
TatI	WGTACW	3 cut(s)	96, 501, 1302
TauI	GCSGC	1 cut(s)	891
TfiI	GAWTC	4 cut(s)	1040, 1174, 1234, 2015
Tru1I	TTAA	7 cut(s)	56, 390, 491, 657, 1122, 1344, 1844
Tru9I	TTAA	7 cut(s)	56, 390, 491, 657, 1122, 1344, 1844
TscAI	CASTG	3 cut(s)	66, 1291, 1684
TseFI	GTSAC	4 cut(s)	256, 1474, 1505, 1943
TseI	GCWGC	6 cut(s)	223, 593, 947, 1193, 1211, 1811
Tsp45I	GTSAC	4 cut(s)	256, 1474, 1505, 1943
TspDTI	ATGAA	6 cut(s)	932, 972, 1032, 1226, 1871, 1907
TspGWI	ACGGA	2 cut(s)	864, 1649
TspRI	CASTG	3 cut(s)	66, 1291, 1684
Tth111I	GACNNNGTC	1 cut(s)	108
Van91I	CCANNNNNTGG	1 cut(s)	1683
VpaK11BI	GGWCC	2 cut(s)	1219, 1545
XapI	RAATTY	3 cut(s)	613, 727, 964
XbaI	TCTAGA	1 cut(s)	1756
XceI	RCATGY	1 cut(s)	1596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XmiI	GTMKAC	2 cut(s)	162, 1269
XmnI	GAANNNNTTC	2 cut(s)	134, 1280
XspI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
Zsp2I	ATGCAT	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.