Histone-lysine n-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13460 AT4G13460 |
| fragaria_vesca | FvH4_2g20121 |
| malus_domestica | MD13G1224000.v1.1 MD16G1228800.v1.1 |
| prunus_persica | Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 |
| pyrus_communis | pycom13g19790 |
| rosa_chinensis | RchiOBHm_Chr4g0395951 |
| rosa_laevigata | RLG00000009586 |
| rosa_multiflora | Rmu_sc0001103.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00340700 |
| rosa_rugosa | Rorug03G0353200 Rorug03G0353300 |
| rosa_samantha | Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100 |
| rosa_wichuraiana | Rw4G005180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1327 |
| Acc36I | ACCTGC | 1 cut(s) | 1327 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 934 |
| AccI | GTMKAC | 1 cut(s) | 252 |
| AccII | CGCG | 3 cut(s) | 380, 474, 629 |
| AclWI | GGATC | 2 cut(s) | 174, 563 |
| AcoI | YGGCCR | 1 cut(s) | 754 |
| AcyI | GRCGYC | 2 cut(s) | 354, 399 |
| AfaI | GTAC | 3 cut(s) | 446, 845, 1360 |
| AflII | CTTAAG | 2 cut(s) | 619, 1160 |
| AgsI | TTSAA | 2 cut(s) | 910, 1267 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 370 |
| AjnI | CCWGG | 2 cut(s) | 240, 756 |
| AluBI | AGCT | 9 cut(s) | 280, 418, 466, 733, 798, 934, 1152, 1488, 1689 |
| AluI | AGCT | 9 cut(s) | 280, 418, 466, 733, 798, 934, 1152, 1488, 1689 |
| Alw21I | GWGCWC | 7 cut(s) | 282, 468, 639, 800, 925, 1154, 1318 |
| Alw26I | GTCTC | 2 cut(s) | 838, 1061 |
| AlwI | GGATC | 2 cut(s) | 174, 563 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 418, 934 |
| Ama87I | CYCGRG | 2 cut(s) | 609, 1064 |
| AoxI | GGCC | 6 cut(s) | 201, 624, 649, 754, 765, 1202 |
| ApeKI | GCWGC | 5 cut(s) | 412, 415, 433, 451, 1135 |
| AspLEI | GCGC | 2 cut(s) | 380, 1406 |
| AsuHPI | GGTGA | 5 cut(s) | 469, 719, 917, 997, 1694 |
| AvaI | CYCGRG | 2 cut(s) | 609, 1064 |
| AvaII | GGWCC | 9 cut(s) | 88, 226, 364, 496, 606, 643, 684, 1225, 1288 |
| BaeGI | GKGCMC | 1 cut(s) | 891 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1148, 1181 |
| BanII | GRGCYC | 5 cut(s) | 8, 282, 468, 800, 1154 |
| BbsI | GAAGAC | 1 cut(s) | 582 |
| Bbv12I | GWGCWC | 7 cut(s) | 282, 468, 639, 800, 925, 1154, 1318 |
| BbvI | GCAGC | 5 cut(s) | 424, 427, 445, 463, 1147 |
| BccI | CCATC | 7 cut(s) | 721, 1040, 1138, 1513, 1673, 1710, 1924 |
| BceAI | ACGGC | 6 cut(s) | 59, 145, 306, 367, 769, 1479 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 842, 876 |
| BciT130I | CCWGG | 2 cut(s) | 242, 758 |
| BciVI | GTATCC | 1 cut(s) | 741 |
| BclI | TGATCA | 3 cut(s) | 1282, 1435, 1888 |
| BcoDI | GTCTC | 2 cut(s) | 838, 1061 |
| BfaI | CTAG | 1 cut(s) | 1650 |
| BfrI | CTTAAG | 2 cut(s) | 619, 1160 |
| BfuAI | ACCTGC | 1 cut(s) | 1327 |
| BfuI | GTATCC | 1 cut(s) | 741 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 77 |
| BglII | AGATCT | 2 cut(s) | 1589, 1746 |
| Bme18I | GGWCC | 9 cut(s) | 88, 226, 364, 496, 606, 643, 684, 1225, 1288 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 370 |
| BmeT110I | CYCGRG | 2 cut(s) | 609, 1064 |
| BmsI | GCATC | 4 cut(s) | 329, 525, 850, 1267 |
| BpiI | GAAGAC | 1 cut(s) | 582 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1629, 1661, 1840, 1872 |
| BpmI | CTGGAG | 1 cut(s) | 956 |
| BpuEI | CTTGAG | 1 cut(s) | 68 |
| BsaBI | GATNNNNATC | 2 cut(s) | 554, 1281 |
| BsaHI | GRCGYC | 2 cut(s) | 354, 399 |
| BsaJI | CCNNGG | 8 cut(s) | 75, 300, 609, 610, 646, 785, 1205, 1674 |
| BsaWI | WCCGGW | 2 cut(s) | 196, 220 |
| Bse1I | ACTGG | 2 cut(s) | 1366, 1554 |
| Bse3DI | GCAATG | 2 cut(s) | 923, 1809 |
| Bse8I | GATNNNNATC | 2 cut(s) | 554, 1281 |
| BseBI | CCWGG | 2 cut(s) | 242, 758 |
| BseDI | CCNNGG | 8 cut(s) | 75, 300, 609, 610, 646, 785, 1205, 1674 |
| BseGI | GGATG | 7 cut(s) | 344, 540, 732, 865, 874, 1684, 1813 |
| BseJI | GATNNNNATC | 2 cut(s) | 554, 1281 |
| BseMI | GCAATG | 2 cut(s) | 923, 1809 |
| BseMII | CTCAG | 4 cut(s) | 499, 1112, 1131, 1757 |
| BseNI | ACTGG | 2 cut(s) | 1366, 1554 |
| BseRI | GAGGAG | 2 cut(s) | 207, 976 |
| BseSI | GKGCMC | 1 cut(s) | 891 |
| BseXI | GCAGC | 5 cut(s) | 424, 427, 445, 463, 1147 |
| BsgI | GTGCAG | 2 cut(s) | 452, 1892 |
| Bsh1236I | CGCG | 3 cut(s) | 380, 474, 629 |
| Bsh1285I | CGRYCG | 1 cut(s) | 458 |
| BshFI | GGCC | 6 cut(s) | 203, 626, 651, 756, 767, 1204 |
| BsiEI | CGRYCG | 1 cut(s) | 458 |
| BsiHKAI | GWGCWC | 7 cut(s) | 282, 468, 639, 800, 925, 1154, 1318 |
| BsiHKCI | CYCGRG | 2 cut(s) | 609, 1064 |
| BslFI | GGGAC | 4 cut(s) | 74, 212, 371, 656 |
| BsmAI | GTCTC | 2 cut(s) | 838, 1061 |
| BsmFI | GGGAC | 4 cut(s) | 74, 212, 371, 656 |
| BsmI | GAATGC | 2 cut(s) | 270, 293 |
| BsnI | GGCC | 6 cut(s) | 203, 626, 651, 756, 767, 1204 |
| BsoBI | CYCGRG | 2 cut(s) | 609, 1064 |
| Bsp1286I | GDGCHC | 9 cut(s) | 8, 282, 468, 639, 800, 891, 925, 1154, 1318 |
| Bsp143I | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| Bsp19I | CCATGG | 1 cut(s) | 1674 |
| BspANI | GGCC | 6 cut(s) | 203, 626, 651, 756, 767, 1204 |
| BspCNI | CTCAG | 4 cut(s) | 498, 1113, 1132, 1756 |
| BspFNI | CGCG | 3 cut(s) | 380, 474, 629 |
| BspMI | ACCTGC | 1 cut(s) | 1327 |
| BspPI | GGATC | 2 cut(s) | 174, 563 |
| BspQI | GCTCTTC | 1 cut(s) | 287 |
| BspTI | CTTAAG | 2 cut(s) | 619, 1160 |
| BsrDI | GCAATG | 2 cut(s) | 923, 1809 |
| BsrI | ACTGG | 2 cut(s) | 1366, 1554 |
| BssECI | CCNNGG | 8 cut(s) | 75, 300, 609, 610, 646, 785, 1205, 1674 |
| BssMI | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| BssNI | GRCGYC | 2 cut(s) | 354, 399 |
| BssT1I | CCWWGG | 2 cut(s) | 300, 1674 |
| Bst2UI | CCWGG | 2 cut(s) | 242, 758 |
| Bst4CI | ACNGT | 3 cut(s) | 250, 665, 1198 |
| Bst6I | CTCTTC | 3 cut(s) | 287, 486, 719 |
| BstACI | GRCGYC | 2 cut(s) | 354, 399 |
| BstAFI | CTTAAG | 2 cut(s) | 619, 1160 |
| BstC8I | GCNNGC | 4 cut(s) | 403, 420, 968, 1659 |
| BstDEI | CTNAG | 8 cut(s) | 485, 1121, 1140, 1178, 1185, 1217, 1310, 1743 |
| BstDSI | CCRYGG | 2 cut(s) | 75, 1674 |
| BstEII | GGTNACC | 1 cut(s) | 707 |
| BstF5I | GGATG | 7 cut(s) | 344, 540, 732, 865, 874, 1684, 1813 |
| BstFNI | CGCG | 3 cut(s) | 380, 474, 629 |
| BstHHI | GCGC | 2 cut(s) | 380, 1406 |
| BstKTI | GATC | 9 cut(s) | 169, 484, 558, 1285, 1438, 1565, 1592, 1749, 1891 |
| BstMAI | GTCTC | 2 cut(s) | 838, 1061 |
| BstMBI | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| BstMCI | CGRYCG | 1 cut(s) | 458 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 65, 71, 77, 139, 324, 333, 895 |
| BstNI | CCWGG | 2 cut(s) | 242, 758 |
| BstNSI | RCATGY | 2 cut(s) | 970, 1610 |
| BstPI | GGTNACC | 1 cut(s) | 707 |
| BstSLI | GKGCMC | 1 cut(s) | 891 |
| BstUI | CGCG | 3 cut(s) | 380, 474, 629 |
| BstV1I | GCAGC | 5 cut(s) | 424, 427, 445, 463, 1147 |
| BstV2I | GAAGAC | 1 cut(s) | 582 |
| BstX2I | RGATCY | 3 cut(s) | 166, 1589, 1746 |
| BstYI | RGATCY | 3 cut(s) | 166, 1589, 1746 |
| BsuI | GTATCC | 1 cut(s) | 741 |
| BsuRI | GGCC | 6 cut(s) | 203, 626, 651, 756, 767, 1204 |
| BtgI | CCRYGG | 2 cut(s) | 75, 1674 |
| BtgZI | GCGATG | 1 cut(s) | 1943 |
| BtsCI | GGATG | 7 cut(s) | 344, 540, 732, 865, 874, 1684, 1813 |
| BveI | ACCTGC | 1 cut(s) | 1327 |
| Cac8I | GCNNGC | 4 cut(s) | 403, 420, 968, 1659 |
| CaiI | CAGNNNCTG | 2 cut(s) | 418, 934 |
| CfoI | GCGC | 2 cut(s) | 380, 1406 |
| Cfr9I | CCCGGG | 1 cut(s) | 609 |
| CseI | GACGC | 5 cut(s) | 343, 407, 463, 618, 1754 |
| Csp6I | GTAC | 3 cut(s) | 445, 844, 1359 |
| CviAII | CATG | 4 cut(s) | 967, 1334, 1607, 1675 |
| CviQI | GTAC | 3 cut(s) | 445, 844, 1359 |
| DdeI | CTNAG | 8 cut(s) | 485, 1121, 1140, 1178, 1185, 1217, 1310, 1743 |
| DpnI | GATC | 9 cut(s) | 168, 483, 557, 1284, 1437, 1564, 1591, 1748, 1890 |
| DpnII | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| DriI | GACNNNNNGTC | 1 cut(s) | 370 |
| EaeI | YGGCCR | 1 cut(s) | 754 |
| Eam1104I | CTCTTC | 3 cut(s) | 287, 486, 719 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 370 |
| EarI | CTCTTC | 3 cut(s) | 287, 486, 719 |
| EciI | GGCGGA | 3 cut(s) | 345, 351, 437 |
| Ecl136II | GAGCTC | 4 cut(s) | 280, 466, 798, 1152 |
| Eco130I | CCWWGG | 2 cut(s) | 300, 1674 |
| Eco24I | GRGCYC | 5 cut(s) | 8, 282, 468, 800, 1154 |
| Eco47I | GGWCC | 9 cut(s) | 88, 226, 364, 496, 606, 643, 684, 1225, 1288 |
| Eco53kI | GAGCTC | 4 cut(s) | 280, 466, 798, 1152 |
| Eco88I | CYCGRG | 2 cut(s) | 609, 1064 |
| Eco91I | GGTNACC | 1 cut(s) | 707 |
| EcoICRI | GAGCTC | 4 cut(s) | 280, 466, 798, 1152 |
| EcoO109I | RGGNCCY | 3 cut(s) | 88, 649, 1288 |
| EcoO65I | GGTNACC | 1 cut(s) | 707 |
| EcoRII | CCWGG | 2 cut(s) | 240, 756 |
| EcoT14I | CCWWGG | 2 cut(s) | 300, 1674 |
| EcoT22I | ATGCAT | 1 cut(s) | 972 |
| EcoT38I | GRGCYC | 5 cut(s) | 8, 282, 468, 800, 1154 |
| ErhI | CCWWGG | 2 cut(s) | 300, 1674 |
| FaeI | CATG | 4 cut(s) | 970, 1337, 1610, 1678 |
| FaqI | GGGAC | 4 cut(s) | 74, 212, 371, 656 |
| FatI | CATG | 4 cut(s) | 966, 1333, 1606, 1674 |
| FauI | CCCGC | 4 cut(s) | 64, 238, 456, 833 |
| FbaI | TGATCA | 3 cut(s) | 1282, 1435, 1888 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| FokI | GGATG | 7 cut(s) | 351, 547, 739, 872, 881, 1691, 1820 |
| FriOI | GRGCYC | 5 cut(s) | 8, 282, 468, 800, 1154 |
| FspBI | CTAG | 1 cut(s) | 1650 |
| GlaI | GCGC | 2 cut(s) | 379, 1405 |
| GsuI | CTGGAG | 1 cut(s) | 956 |
| HaeIII | GGCC | 6 cut(s) | 203, 626, 651, 756, 767, 1204 |
| HgaI | GACGC | 5 cut(s) | 343, 407, 463, 618, 1754 |
| HhaI | GCGC | 2 cut(s) | 380, 1406 |
| Hin1I | GRCGYC | 2 cut(s) | 354, 399 |
| Hin1II | CATG | 4 cut(s) | 970, 1337, 1610, 1678 |
| Hin6I | GCGC | 2 cut(s) | 378, 1404 |
| HinP1I | GCGC | 2 cut(s) | 378, 1404 |
| HphI | GGTGA | 5 cut(s) | 469, 719, 917, 997, 1694 |
| Hpy166II | GTNNAC | 1 cut(s) | 253 |
| Hpy188I | TCNGA | 9 cut(s) | 259, 312, 524, 555, 1329, 1440, 1515, 1746, 1860 |
| Hpy188III | TCNNGA | 7 cut(s) | 23, 275, 724, 1064, 1066, 1286, 1754 |
| Hpy8I | GTNNAC | 1 cut(s) | 253 |
| Hpy99I | CGWCG | 4 cut(s) | 323, 347, 359, 634 |
| HpyAV | CCTTC | 1 cut(s) | 1024 |
| HpyCH4III | ACNGT | 3 cut(s) | 250, 665, 1198 |
| HpyCH4V | TGCA | 8 cut(s) | 433, 863, 970, 1322, 1398, 1634, 1802, 1873 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 65, 71, 77, 139, 324, 333, 895 |
| HpyF3I | CTNAG | 8 cut(s) | 485, 1121, 1140, 1178, 1185, 1217, 1310, 1743 |
| Hsp92I | GRCGYC | 2 cut(s) | 354, 399 |
| Hsp92II | CATG | 4 cut(s) | 970, 1337, 1610, 1678 |
| HspAI | GCGC | 2 cut(s) | 378, 1404 |
| Ksp22I | TGATCA | 3 cut(s) | 1282, 1435, 1888 |
| Kzo9I | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| LguI | GCTCTTC | 1 cut(s) | 287 |
| Lsp1109I | GCAGC | 5 cut(s) | 424, 427, 445, 463, 1147 |
| LweI | GCATC | 4 cut(s) | 329, 525, 850, 1267 |
| MaeI | CTAG | 1 cut(s) | 1650 |
| MaeIII | GTNAC | 5 cut(s) | 475, 665, 707, 1522, 2015 |
| MalI | GATC | 9 cut(s) | 168, 483, 557, 1284, 1437, 1564, 1591, 1748, 1890 |
| MboI | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| MflI | RGATCY | 3 cut(s) | 166, 1589, 1746 |
| MhlI | GDGCHC | 9 cut(s) | 8, 282, 468, 639, 800, 891, 925, 1154, 1318 |
| MluCI | AATT | 6 cut(s) | 186, 210, 559, 675, 771, 1393 |
| MlyI | GAGTC | 3 cut(s) | 380, 1183, 1324 |
| MmeI | TCCRAC | 5 cut(s) | 144, 936, 1352, 1493, 1793 |
| Mph1103I | ATGCAT | 1 cut(s) | 972 |
| MseI | TTAA | 4 cut(s) | 620, 1113, 1161, 1377 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1611 |
| MspA1I | CMGCKG | 4 cut(s) | 418, 436, 454, 1792 |
| MspCI | CTTAAG | 2 cut(s) | 619, 1160 |
| Mva1269I | GAATGC | 2 cut(s) | 270, 293 |
| MvaI | CCWGG | 2 cut(s) | 242, 758 |
| MvnI | CGCG | 3 cut(s) | 380, 474, 629 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 65, 71, 77, 139, 324, 333, 895 |
| NcoI | CCATGG | 1 cut(s) | 1674 |
| NdeII | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| NlaIII | CATG | 4 cut(s) | 970, 1337, 1610, 1678 |
| NmeAIII | GCCGAG | 2 cut(s) | 136, 1230 |
| NmuCI | GTSAC | 4 cut(s) | 475, 665, 707, 1522 |
| NsiI | ATGCAT | 1 cut(s) | 972 |
| NspI | RCATGY | 2 cut(s) | 970, 1610 |
| PaeI | GCATGC | 1 cut(s) | 970 |
| PaeR7I | CTCGAG | 1 cut(s) | 1064 |
| PaqCI | CACCTGC | 1 cut(s) | 1327 |
| PciSI | GCTCTTC | 1 cut(s) | 287 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 351 |
| PctI | GAATGC | 2 cut(s) | 270, 293 |
| PfeI | GAWTC | 7 cut(s) | 307, 545, 550, 586, 1060, 1125, 1516 |
| PflFI | GACNNNGTC | 2 cut(s) | 248, 353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 934 |
| PfoI | TCCNGGA | 1 cut(s) | 639 |
| PleI | GAGTC | 3 cut(s) | 379, 1182, 1324 |
| PpsI | GAGTC | 3 cut(s) | 379, 1182, 1324 |
| PpuMI | RGGWCCY | 2 cut(s) | 88, 1288 |
| Psp124BI | GAGCTC | 4 cut(s) | 282, 468, 800, 1154 |
| Psp5II | RGGWCCY | 2 cut(s) | 88, 1288 |
| Psp6I | CCWGG | 2 cut(s) | 240, 756 |
| PspEI | GGTNACC | 1 cut(s) | 707 |
| PspGI | CCWGG | 2 cut(s) | 240, 756 |
| PspPPI | RGGWCCY | 2 cut(s) | 88, 1288 |
| PstNI | CAGNNNCTG | 2 cut(s) | 418, 934 |
| PsuI | RGATCY | 3 cut(s) | 166, 1589, 1746 |
| PsyI | GACNNNGTC | 2 cut(s) | 248, 353 |
| PvuII | CAGCTG | 1 cut(s) | 418 |
| RsaI | GTAC | 3 cut(s) | 446, 845, 1360 |
| RsaNI | GTAC | 3 cut(s) | 445, 844, 1359 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1611 |
| SacI | GAGCTC | 4 cut(s) | 282, 468, 800, 1154 |
| SapI | GCTCTTC | 1 cut(s) | 287 |
| SaqAI | TTAA | 4 cut(s) | 620, 1113, 1161, 1377 |
| Sau3AI | GATC | 9 cut(s) | 166, 481, 555, 1282, 1435, 1562, 1589, 1746, 1888 |
| SchI | GAGTC | 3 cut(s) | 380, 1183, 1324 |
| SduI | GDGCHC | 9 cut(s) | 8, 282, 468, 639, 800, 891, 925, 1154, 1318 |
| SfaNI | GCATC | 4 cut(s) | 329, 525, 850, 1267 |
| Sfr274I | CTCGAG | 1 cut(s) | 1064 |
| SinI | GGWCC | 9 cut(s) | 88, 226, 364, 496, 606, 643, 684, 1225, 1288 |
| SlaI | CTCGAG | 1 cut(s) | 1064 |
| SmaI | CCCGGG | 1 cut(s) | 611 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1611 |
| SmlI | CTYRAG | 4 cut(s) | 83, 619, 1064, 1160 |
| SmoI | CTYRAG | 4 cut(s) | 83, 619, 1064, 1160 |
| SphI | GCATGC | 1 cut(s) | 970 |
| Sse9I | AATT | 6 cut(s) | 186, 210, 559, 675, 771, 1393 |
| SspMI | CTAG | 1 cut(s) | 1650 |
| SstI | GAGCTC | 4 cut(s) | 282, 468, 800, 1154 |
| StyI | CCWWGG | 2 cut(s) | 300, 1674 |
| TaaI | ACNGT | 3 cut(s) | 250, 665, 1198 |
| TaqI | TCGA | 7 cut(s) | 99, 458, 548, 563, 1065, 1128, 1154 |
| TasI | AATT | 6 cut(s) | 186, 210, 559, 675, 771, 1393 |
| TauI | GCSGC | 9 cut(s) | 68, 71, 74, 136, 139, 142, 236, 330, 629 |
| TfiI | GAWTC | 7 cut(s) | 307, 545, 550, 586, 1060, 1125, 1516 |
| Tru1I | TTAA | 4 cut(s) | 620, 1113, 1161, 1377 |
| Tru9I | TTAA | 4 cut(s) | 620, 1113, 1161, 1377 |
| TseFI | GTSAC | 4 cut(s) | 475, 665, 707, 1522 |
| TseI | GCWGC | 5 cut(s) | 412, 415, 433, 451, 1135 |
| Tsp45I | GTSAC | 4 cut(s) | 475, 665, 707, 1522 |
| TspDTI | ATGAA | 3 cut(s) | 1424, 1553, 2004 |
| TspGWI | ACGGA | 3 cut(s) | 500, 619, 906 |
| TspMI | CCCGGG | 1 cut(s) | 609 |
| Tth111I | GACNNNGTC | 2 cut(s) | 248, 353 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 934 |
| Vha464I | CTTAAG | 2 cut(s) | 619, 1160 |
| VpaK11BI | GGWCC | 9 cut(s) | 88, 226, 364, 496, 606, 643, 684, 1225, 1288 |
| XceI | RCATGY | 2 cut(s) | 970, 1610 |
| XhoI | CTCGAG | 1 cut(s) | 1064 |
| XmaI | CCCGGG | 1 cut(s) | 609 |
| XmiI | GTMKAC | 1 cut(s) | 252 |
| XspI | CTAG | 1 cut(s) | 1650 |
| Zsp2I | ATGCAT | 1 cut(s) | 972 |