Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0009622

Physical Location & Seq

Genomic Coordinates Forward (+)

54951425 .. 54953437

Gene Structure 2013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009586

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGGCTCTCTCCTCCCAATTCTTGACCTCAATGCCTCCCCTCAATCCGCCCCCAATTCAACCCTAGCCACCGCCACCATATCCCTCAAGGTCCCCAAAATCGAACCCAAGCCCGAACCTTGCGACGACCCAGCTCCTCAACCCCCCTTCGATCCCAGCCCCAGCTCCGACATTTTCCCCAATCCCCAAACTACCCCTCTCCCCCACCAGGCCTCGATCGTCGCCGCCGCGCCGGACCACGTCTACTCCGAGTTCCACCGCATTTCCGAGCTCTTCCACACCGCCTTCGCGAAAGGGATTCAGAACTGCGACGGCGGCGGTGGCGGTGGAGACGAGGACGGCGTCGTTCTGGACCCGGAGTCCGGGGCGATTGTTCCGGTGGAGGACAACAACCAGCAGCAGCAGCAGCTGGCGGAGGTGGTGCAGCGTAAGAAGTACCCGCAGCGGTCGAACGAGCTCGTCCGGGTCACCGATCTCAGCGACGAGGACCACCGCTACTTCCGTGAGGTCGTCAGGAAGACCCGGATGCTCTACGATTCGATTCGGATCATTTCGGTGGCGGAGGAGGACAAGAAGAATCCGGGTCAGGGGAAGCGGACCCGGGGCGACTTGCGGGCCGCCTCCGTGCTCCGGGACCGTGGGCTCTGGCTCAACCGTGATAAGCGGATTGTGGGGTCCATTCCTGGAGTCTATGTTGGTGACCTCTTCTTCTTTCGCATGGAGCTATGTGTGGTTGGGATACATGGGCAAGTCCAAGCTGGAATTGACTACCTTCCGGGGAGCCAGAGCTCGAATAGGGAGCCGATTGCGACGAGCATTATCGTCTCTGGTGGGTATGAGGATGATGAGGATGCTGGGGATATTATTATCTACACAGGACATGGAGGGCAGGACAAGTTTAATAGGCAATGTGCACACCAGAAGCTGGAGGGTGGCAACTTGGCGTTGGAGAGGAGTATGCATTACGGGATTGAAGTGAGGGTTATTAGGGGGAGGAAGATTCATGGAGCTGTTTCGAGTAAGGTGTATGTTTATGATGGGTTGTATAGGATTCTCGAGACTTGGCTTGATGTTGGGAAGTCGGGGTTTGGTGTTTATAAGTTTAAGCTTTTGAGAATCGAGGGGCAGCCTGAGATGGGGAGCTCCATTCTTAAGTTTGCCGAGAGTCTTAGGAGTAGGCCATTGAGTGTGAGGCCGAGGGGTTATCTTAGTTTGGATCTTTCGCAGCAGAGGGAGAAGATTCCGGTGTTGCTTTTCAATGACATTGATGCTGATCAGGACCCCTTGTATTATGAGTATCTTAGGACACCTGCATTTCCAGCTCATGTGTATCATCAGTCGGCAAATGGTACTGGCTGTGAATGTGTCAACGGTTGTAATGAAAATTGCTTTTGTGCTATGAAAAATGGAGGGGAGTTTCCTTATGATCAGAATGGGTTTCTTTTGAGGGGGAAGCCTGTGGTATTTGAGTGTGGGACCTTCTGCCGCTGCCCCCCGCAGTGTCGGAATCGTGTCACCCAACATGGATTGAGAAATAGACTGGAAGTGTTTAGATCAAGGGAAACAGGTTGGGGGGTTAGGTGTTTGGACTTGATACATGCCGGCGCTTTTATATGTGAGTATACAGGAGTTATTCTCACGAGGGAGCAGGCTCAAATTTTTTCCATGGATGGTGATAGCTTGATCTATCCCCATCGGTTTTCTGATAAATGGGCAGAATGGGGAGATTTATCTCAGATCTATCCTGATTATGTGCGTCCAACTTATCCGGCAATCCCACCGCTGGATTTTGCAATGGATGTGTCAAAAATGAGGAATGTTGCTTGTTATATGAGCCAGAGTACCACTCCAAATGTGATGGTGCAGTTCGTTCTCTATGATCACAACAACTTGATGTTTCCTCATCTTATGCTATTTGCAATGGAGAACATTCCTCCTCTGAGGGAGTTAAGCCTTGACTATGGGGTGGCGGTGGCTGATGAATGGACAGGGAAACTTGCTATCTGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0046483 GO:0048519 GO:0050789 GO:0051276 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080188 GO:0090304 GO:0098687 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

671

Amino Acids

74.97

Weight (kDa)

5.77

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	224 - 376	3.5e-52	SAD/SRA domain
Pre-SET	PF05033	408 - 504	2.6e-20	Pre-SET motif
SET	PF00856	523 - 655	2.8e-11	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13460 AT4G13460
fragaria_vesca	FvH4_2g20121
malus_domestica	MD13G1224000.v1.1 MD16G1228800.v1.1
prunus_persica	Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1
pyrus_communis	pycom13g19790
rosa_chinensis	RchiOBHm_Chr4g0395951
rosa_laevigata	RLG00000009586
rosa_multiflora	Rmu_sc0001103.1_g000009
rosa_roxburghii	Rroxscaffold_5G00340700
rosa_rugosa	Rorug03G0353200 Rorug03G0353300
rosa_samantha	Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100
rosa_wichuraiana	Rw4G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1098
AarI	CACCTGC	1 cut(s)	1318
Acc36I	ACCTGC	1 cut(s)	1318
AccB7I	CCANNNNNTGG	1 cut(s)	925
AccI	GTMKAC	2 cut(s)	243, 1622
AccII	CGCG	2 cut(s)	230, 290
AclWI	GGATC	3 cut(s)	146, 554, 1224
AcsI	RAATTY	1 cut(s)	1656
AcyI	GRCGYC	1 cut(s)	342
AfaI	GTAC	3 cut(s)	437, 1351, 1843
AfiI	CCNNNNNNNGG	7 cut(s)	208, 362, 587, 630, 925, 1136, 1783
AflII	CTTAAG	1 cut(s)	1151
AgsI	TTSAA	3 cut(s)	60, 974, 1258
AhdI	GACNNNNNGTC	1 cut(s)	358
AjiI	CACGTC	1 cut(s)	241
AjnI	CCWGG	2 cut(s)	207, 682
Alw21I	GWGCWC	6 cut(s)	273, 459, 630, 791, 916, 1145
Alw26I	GTCTC	3 cut(s)	324, 829, 1052
Alw44I	GTGCAC	1 cut(s)	912
AlwI	GGATC	3 cut(s)	146, 554, 1224
AlwNI	CAGNNNCTG	2 cut(s)	409, 925
Ama87I	CYCGRG	2 cut(s)	600, 1055
AoxI	GGCC	4 cut(s)	210, 615, 1178, 1193
ApaLI	GTGCAC	1 cut(s)	912
ApeKI	GCWGC	9 cut(s)	397, 400, 403, 406, 424, 442, 1126, 1225, 1488
ApoI	RAATTY	1 cut(s)	1656
AspLEI	GCGC	2 cut(s)	232, 1607
AsuC2I	CCSGG	9 cut(s)	356, 364, 464, 523, 582, 601, 602, 632, 777
AsuHPI	GGTGA	4 cut(s)	460, 710, 1507, 1685
AvaI	CYCGRG	2 cut(s)	600, 1055
AvaII	GGWCC	9 cut(s)	91, 235, 352, 487, 597, 634, 675, 1279, 1476
BaeGI	GKGCMC	1 cut(s)	916
BanII	GRGCYC	6 cut(s)	8, 273, 459, 645, 791, 1145
BauI	CACGAG	1 cut(s)	1639
BbsI	GAAGAC	1 cut(s)	524
Bbv12I	GWGCWC	6 cut(s)	273, 459, 630, 791, 916, 1145
BbvI	GCAGC	9 cut(s)	409, 412, 415, 418, 436, 454, 1138, 1237, 1475
BccI	CCATC	5 cut(s)	1031, 1129, 1664, 1701, 1852
BceAI	ACGGC	2 cut(s)	328, 355
BciT130I	CCWGG	2 cut(s)	209, 684
BciVI	GTATCC	1 cut(s)	732
BclI	TGATCA	3 cut(s)	1273, 1426, 1879
BcnI	CCSGG	9 cut(s)	356, 364, 464, 523, 582, 601, 602, 632, 777
BcoDI	GTCTC	3 cut(s)	324, 829, 1052
BfaI	CTAG	1 cut(s)	65
BfoI	RGCGCY	1 cut(s)	1608
BfrI	CTTAAG	1 cut(s)	1151
BfuAI	ACCTGC	1 cut(s)	1318
BfuI	GTATCC	1 cut(s)	732
BglII	AGATCT	1 cut(s)	1737
Bme18I	GGWCC	9 cut(s)	91, 235, 352, 487, 597, 634, 675, 1279, 1476
BmeRI	GACNNNNNGTC	1 cut(s)	358
BmeT110I	CYCGRG	2 cut(s)	600, 1055
BmgBI	CACGTC	1 cut(s)	241
BmiI	GGNNCC	9 cut(s)	93, 354, 599, 635, 676, 782, 801, 1281, 1477
BmsI	GCATC	3 cut(s)	516, 841, 1258
BpiI	GAAGAC	1 cut(s)	524
BplI	GAGNNNNNCTC	4 cut(s)	1620, 1652, 1831, 1863
BpmI	CTGGAG	2 cut(s)	705, 947
BpuEI	CTTGAG	1 cut(s)	71
BpuMI	CCSGG	9 cut(s)	356, 364, 464, 523, 582, 601, 602, 632, 777
BsaBI	GATNNNNATC	2 cut(s)	545, 1272
BsaHI	GRCGYC	1 cut(s)	342
BsaJI	CCNNGG	7 cut(s)	363, 600, 601, 637, 776, 1196, 1665
BsaWI	WCCGGW	2 cut(s)	376, 1243
BsaXI	ACNNNNNCTCC	4 cut(s)	230, 260, 678, 708
Bsc4I	CCNNNNNNNGG	7 cut(s)	208, 362, 587, 630, 925, 1136, 1783
Bse118I	RCCGGY	1 cut(s)	1601
Bse1I	ACTGG	2 cut(s)	1357, 1545
Bse3DI	GCAATG	3 cut(s)	914, 1800, 1926
Bse8I	GATNNNNATC	2 cut(s)	545, 1272
BseBI	CCWGG	2 cut(s)	209, 684
BseDI	CCNNGG	7 cut(s)	363, 600, 601, 637, 776, 1196, 1665
BseGI	GGATG	5 cut(s)	531, 847, 856, 1675, 1804
BseJI	GATNNNNATC	2 cut(s)	545, 1272
BseLI	CCNNNNNNNGG	7 cut(s)	208, 362, 587, 630, 925, 1136, 1783
BseMI	GCAATG	3 cut(s)	914, 1800, 1926
BseMII	CTCAG	4 cut(s)	490, 1122, 1748, 1931
BseNI	ACTGG	2 cut(s)	1357, 1545
BseRI	GAGGAG	4 cut(s)	126, 578, 967, 1926
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	9 cut(s)	409, 412, 415, 418, 436, 454, 1138, 1237, 1475
BseYI	CCCAGC	4 cut(s)	130, 155, 161, 854
BsgI	GTGCAG	2 cut(s)	443, 1883
Bsh1236I	CGCG	2 cut(s)	230, 290
Bsh1285I	CGRYCG	2 cut(s)	219, 449
BshFI	GGCC	4 cut(s)	212, 617, 1180, 1195
BsiEI	CGRYCG	2 cut(s)	219, 449
BsiHKAI	GWGCWC	6 cut(s)	273, 459, 630, 791, 916, 1145
BsiHKCI	CYCGRG	2 cut(s)	600, 1055
BslFI	GGGAC	3 cut(s)	77, 647, 1489
BslI	CCNNNNNNNGG	7 cut(s)	208, 362, 587, 630, 925, 1136, 1783
BsmAI	GTCTC	3 cut(s)	324, 829, 1052
BsmBI	CGTCTC	2 cut(s)	324, 829
BsmFI	GGGAC	3 cut(s)	77, 647, 1489
BsnI	GGCC	4 cut(s)	212, 617, 1180, 1195
BsoBI	CYCGRG	2 cut(s)	600, 1055
Bsp1286I	GDGCHC	8 cut(s)	8, 273, 459, 630, 645, 791, 916, 1145
Bsp19I	CCATGG	1 cut(s)	1665
Bsp68I	TCGCGA	1 cut(s)	290
BspANI	GGCC	4 cut(s)	212, 617, 1180, 1195
BspCNI	CTCAG	4 cut(s)	489, 1123, 1747, 1932
BspFNI	CGCG	2 cut(s)	230, 290
BspLI	GGNNCC	9 cut(s)	93, 354, 599, 635, 676, 782, 801, 1281, 1477
BspMI	ACCTGC	1 cut(s)	1318
BspPI	GGATC	3 cut(s)	146, 554, 1224
BspQI	GCTCTTC	1 cut(s)	278
BspTI	CTTAAG	1 cut(s)	1151
BsrDI	GCAATG	3 cut(s)	914, 1800, 1926
BsrFI	RCCGGY	1 cut(s)	1601
BsrI	ACTGG	2 cut(s)	1357, 1545
BssAI	RCCGGY	1 cut(s)	1601
BssECI	CCNNGG	7 cut(s)	363, 600, 601, 637, 776, 1196, 1665
BssNAI	GTATAC	1 cut(s)	1623
BssNI	GRCGYC	1 cut(s)	342
BssSI	CACGAG	1 cut(s)	1639
BssT1I	CCWWGG	1 cut(s)	1665
Bst1107I	GTATAC	1 cut(s)	1623
Bst2BI	CACGAG	1 cut(s)	1639
Bst2UI	CCWGG	2 cut(s)	209, 684
Bst4CI	ACNGT	3 cut(s)	638, 656, 1373
Bst6I	CTCTTC	2 cut(s)	278, 710
BstACI	GRCGYC	1 cut(s)	342
BstAFI	CTTAAG	1 cut(s)	1151
BstC8I	GCNNGC	4 cut(s)	411, 615, 1603, 1650
BstDEI	CTNAG	7 cut(s)	476, 1131, 1169, 1208, 1301, 1734, 1940
BstDSI	CCRYGG	2 cut(s)	637, 1665
BstEII	GGTNACC	2 cut(s)	466, 698
BstF5I	GGATG	5 cut(s)	531, 847, 856, 1675, 1804
BstFNI	CGCG	2 cut(s)	230, 290
BstH2I	RGCGCY	1 cut(s)	1608
BstHHI	GCGC	2 cut(s)	232, 1607
BstMAI	GTCTC	3 cut(s)	324, 829, 1052
BstMCI	CGRYCG	2 cut(s)	219, 449
BstMWI	GCNNNNNNNGC	5 cut(s)	315, 321, 403, 406, 1319
BstNI	CCWGG	2 cut(s)	209, 684
BstNSI	RCATGY	1 cut(s)	1601
BstPI	GGTNACC	2 cut(s)	466, 698
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	2 cut(s)	230, 290
BstV1I	GCAGC	9 cut(s)	409, 412, 415, 418, 436, 454, 1138, 1237, 1475
BstV2I	GAAGAC	1 cut(s)	524
BstX2I	RGATCY	2 cut(s)	1216, 1737
BstYI	RGATCY	2 cut(s)	1216, 1737
BstZ17I	GTATAC	1 cut(s)	1623
BsuI	GTATCC	1 cut(s)	732
BsuRI	GGCC	4 cut(s)	212, 617, 1180, 1195
BtgI	CCRYGG	2 cut(s)	637, 1665
BtrI	CACGTC	1 cut(s)	241
BtsCI	GGATG	5 cut(s)	531, 847, 856, 1675, 1804
BtsI	GCAGTG	1 cut(s)	1505
BtsIMutI	CAGTG	1 cut(s)	1505
BtuMI	TCGCGA	1 cut(s)	290
BveI	ACCTGC	1 cut(s)	1318
Cac8I	GCNNGC	4 cut(s)	411, 615, 1603, 1650
CaiI	CAGNNNCTG	2 cut(s)	409, 925
CfoI	GCGC	2 cut(s)	232, 1607
Cfr10I	RCCGGY	1 cut(s)	1601
Cfr9I	CCCGGG	1 cut(s)	600
CseI	GACGC	2 cut(s)	331, 1745
Csp6I	GTAC	3 cut(s)	436, 1350, 1842
CviAII	CATG	8 cut(s)	718, 743, 881, 1004, 1325, 1523, 1598, 1666
CviQI	GTAC	3 cut(s)	436, 1350, 1842
DdeI	CTNAG	7 cut(s)	476, 1131, 1169, 1208, 1301, 1734, 1940
DriI	GACNNNNNGTC	1 cut(s)	358
Eam1104I	CTCTTC	2 cut(s)	278, 710
Eam1105I	GACNNNNNGTC	1 cut(s)	358
EarI	CTCTTC	2 cut(s)	278, 710
EciI	GGCGGA	3 cut(s)	37, 428, 575
Ecl136II	GAGCTC	4 cut(s)	271, 457, 789, 1143
Eco130I	CCWWGG	1 cut(s)	1665
Eco147I	AGGCCT	1 cut(s)	212
Eco24I	GRGCYC	6 cut(s)	8, 273, 459, 645, 791, 1145
Eco47I	GGWCC	9 cut(s)	91, 235, 352, 487, 597, 634, 675, 1279, 1476
Eco53kI	GAGCTC	4 cut(s)	271, 457, 789, 1143
Eco88I	CYCGRG	2 cut(s)	600, 1055
Eco91I	GGTNACC	2 cut(s)	466, 698
EcoICRI	GAGCTC	4 cut(s)	271, 457, 789, 1143
EcoO109I	RGGNCCY	3 cut(s)	91, 1279, 1476
EcoO65I	GGTNACC	2 cut(s)	466, 698
EcoRII	CCWGG	2 cut(s)	207, 682
EcoT14I	CCWWGG	1 cut(s)	1665
EcoT22I	ATGCAT	1 cut(s)	963
EcoT38I	GRGCYC	6 cut(s)	8, 273, 459, 645, 791, 1145
ErhI	CCWWGG	1 cut(s)	1665
Esp3I	CGTCTC	2 cut(s)	324, 829
FaeI	CATG	8 cut(s)	721, 746, 884, 1007, 1328, 1526, 1601, 1669
FaqI	GGGAC	3 cut(s)	77, 647, 1489
FatI	CATG	8 cut(s)	717, 742, 880, 1003, 1324, 1522, 1597, 1665
FauI	CCCGC	3 cut(s)	447, 606, 1503
FbaI	TGATCA	3 cut(s)	1273, 1426, 1879
FblI	GTMKAC	2 cut(s)	243, 1622
FokI	GGATG	5 cut(s)	538, 854, 863, 1682, 1811
FriOI	GRGCYC	6 cut(s)	8, 273, 459, 645, 791, 1145
FspBI	CTAG	1 cut(s)	65
GlaI	GCGC	2 cut(s)	231, 1606
GsaI	CCCAGC	4 cut(s)	134, 159, 165, 858
GsuI	CTGGAG	2 cut(s)	705, 947
HaeII	RGCGCY	1 cut(s)	1608
HaeIII	GGCC	4 cut(s)	212, 617, 1180, 1195
HgaI	GACGC	2 cut(s)	331, 1745
HhaI	GCGC	2 cut(s)	232, 1607
Hin1I	GRCGYC	1 cut(s)	342
Hin1II	CATG	8 cut(s)	721, 746, 884, 1007, 1328, 1526, 1601, 1669
Hin6I	GCGC	2 cut(s)	230, 1605
HinP1I	GCGC	2 cut(s)	230, 1605
HincII	GTYRAC	1 cut(s)	1369
HindII	GTYRAC	1 cut(s)	1369
HindIII	AAGCTT	1 cut(s)	1106
HphI	GGTGA	4 cut(s)	460, 710, 1507, 1685
Hpy166II	GTNNAC	4 cut(s)	244, 914, 1369, 1623
Hpy188III	TCNNGA	9 cut(s)	23, 289, 350, 514, 1055, 1057, 1277, 1639, 1745
Hpy8I	GTNNAC	4 cut(s)	244, 914, 1369, 1623
Hpy99I	CGWCG	6 cut(s)	128, 224, 314, 347, 485, 814
HpyAV	CCTTC	4 cut(s)	157, 295, 782, 1489
HpyCH4III	ACNGT	3 cut(s)	638, 656, 1373
HpyCH4IV	ACGT	1 cut(s)	240
HpyCH4V	TGCA	7 cut(s)	424, 914, 961, 1313, 1793, 1864, 1919
HpyF10VI	GCNNNNNNNGC	5 cut(s)	315, 321, 403, 406, 1319
HpyF3I	CTNAG	7 cut(s)	476, 1131, 1169, 1208, 1301, 1734, 1940
HpySE526I	ACGT	1 cut(s)	240
Hsp92I	GRCGYC	1 cut(s)	342
Hsp92II	CATG	8 cut(s)	721, 746, 884, 1007, 1328, 1526, 1601, 1669
HspAI	GCGC	2 cut(s)	230, 1605
KroI	GCCGGC	1 cut(s)	1601
KroNI	GCCGGC	1 cut(s)	1603
Ksp22I	TGATCA	3 cut(s)	1273, 1426, 1879
LguI	GCTCTTC	1 cut(s)	278
Lsp1109I	GCAGC	9 cut(s)	409, 412, 415, 418, 436, 454, 1138, 1237, 1475
LweI	GCATC	3 cut(s)	516, 841, 1258
MaeI	CTAG	1 cut(s)	65
MaeII	ACGT	1 cut(s)	240
MaeIII	GTNAC	4 cut(s)	466, 698, 1513, 2006
MboII	GAAGA	7 cut(s)	265, 529, 586, 697, 700, 1009, 1249
MflI	RGATCY	2 cut(s)	1216, 1737
MhlI	GDGCHC	8 cut(s)	8, 273, 459, 630, 645, 791, 916, 1145
MluCI	AATT	5 cut(s)	18, 55, 762, 1384, 1656
MlyI	GAGTC	3 cut(s)	368, 696, 1174
MmeI	TCCRAC	4 cut(s)	192, 927, 1484, 1784
Mph1103I	ATGCAT	1 cut(s)	963
MroNI	GCCGGC	1 cut(s)	1601
MseI	TTAA	4 cut(s)	900, 1104, 1152, 1949
MslI	CAYNNNNRTG	1 cut(s)	554
MspA1I	CMGCKG	4 cut(s)	409, 445, 1488, 1783
MspCI	CTTAAG	1 cut(s)	1151
MvaI	CCWGG	2 cut(s)	209, 684
MvnI	CGCG	2 cut(s)	230, 290
MwoI	GCNNNNNNNGC	5 cut(s)	315, 321, 403, 406, 1319
NaeI	GCCGGC	1 cut(s)	1603
NciI	CCSGG	9 cut(s)	356, 364, 464, 523, 582, 601, 602, 632, 777
NcoI	CCATGG	1 cut(s)	1665
NgoMIV	GCCGGC	1 cut(s)	1601
NlaIII	CATG	8 cut(s)	721, 746, 884, 1007, 1328, 1526, 1601, 1669
NlaIV	GGNNCC	9 cut(s)	93, 354, 599, 635, 676, 782, 801, 1281, 1477
NmeAIII	GCCGAG	2 cut(s)	1186, 1221
NmuCI	GTSAC	3 cut(s)	466, 698, 1513
NruI	TCGCGA	1 cut(s)	290
NsiI	ATGCAT	1 cut(s)	963
NspI	RCATGY	1 cut(s)	1601
PaeR7I	CTCGAG	1 cut(s)	1055
PaqCI	CACCTGC	1 cut(s)	1318
PceI	AGGCCT	1 cut(s)	212
PciSI	GCTCTTC	1 cut(s)	278
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 339
PdiI	GCCGGC	1 cut(s)	1603
PfeI	GAWTC	9 cut(s)	298, 536, 541, 577, 1000, 1051, 1116, 1240, 1507
PflFI	GACNNNGTC	2 cut(s)	239, 341
PflMI	CCANNNNNTGG	1 cut(s)	925
PfoI	TCCNGGA	2 cut(s)	630, 682
Ple19I	CGATCG	1 cut(s)	219
PleI	GAGTC	3 cut(s)	367, 695, 1173
PpsI	GAGTC	3 cut(s)	367, 695, 1173
PpuMI	RGGWCCY	3 cut(s)	91, 1279, 1476
PsiI	TTATAA	1 cut(s)	1098
Psp124BI	GAGCTC	4 cut(s)	273, 459, 791, 1145
Psp5II	RGGWCCY	3 cut(s)	91, 1279, 1476
Psp6I	CCWGG	2 cut(s)	207, 682
PspEI	GGTNACC	2 cut(s)	466, 698
PspFI	CCCAGC	4 cut(s)	130, 155, 161, 854
PspGI	CCWGG	2 cut(s)	207, 682
PspN4I	GGNNCC	9 cut(s)	93, 354, 599, 635, 676, 782, 801, 1281, 1477
PspPPI	RGGWCCY	3 cut(s)	91, 1279, 1476
PstNI	CAGNNNCTG	2 cut(s)	409, 925
PsuI	RGATCY	2 cut(s)	1216, 1737
PsyI	GACNNNGTC	2 cut(s)	239, 341
PvuI	CGATCG	1 cut(s)	219
PvuII	CAGCTG	1 cut(s)	409
RruI	TCGCGA	1 cut(s)	290
RsaI	GTAC	3 cut(s)	437, 1351, 1843
RsaNI	GTAC	3 cut(s)	436, 1350, 1842
RseI	CAYNNNNRTG	1 cut(s)	554
SacI	GAGCTC	4 cut(s)	273, 459, 791, 1145
SapI	GCTCTTC	1 cut(s)	278
SaqAI	TTAA	4 cut(s)	900, 1104, 1152, 1949
SchI	GAGTC	3 cut(s)	368, 696, 1174
SduI	GDGCHC	8 cut(s)	8, 273, 459, 630, 645, 791, 916, 1145
SfaNI	GCATC	3 cut(s)	516, 841, 1258
Sfr274I	CTCGAG	1 cut(s)	1055
SinI	GGWCC	9 cut(s)	91, 235, 352, 487, 597, 634, 675, 1279, 1476
SlaI	CTCGAG	1 cut(s)	1055
SmaI	CCCGGG	1 cut(s)	602
SmiMI	CAYNNNNRTG	1 cut(s)	554
SmlI	CTYRAG	3 cut(s)	86, 1055, 1151
SmoI	CTYRAG	3 cut(s)	86, 1055, 1151
Sse9I	AATT	5 cut(s)	18, 55, 762, 1384, 1656
SseBI	AGGCCT	1 cut(s)	212
SspMI	CTAG	1 cut(s)	65
SstI	GAGCTC	4 cut(s)	273, 459, 791, 1145
StuI	AGGCCT	1 cut(s)	212
StyI	CCWWGG	1 cut(s)	1665
TaaI	ACNGT	3 cut(s)	638, 656, 1373
TaiI	ACGT	1 cut(s)	243
TaqI	TCGA	9 cut(s)	102, 150, 215, 449, 539, 791, 1016, 1056, 1119
TasI	AATT	5 cut(s)	18, 55, 762, 1384, 1656
TauI	GCSGC	5 cut(s)	227, 230, 318, 620, 1488
TfiI	GAWTC	9 cut(s)	298, 536, 541, 577, 1000, 1051, 1116, 1240, 1507
Tru1I	TTAA	4 cut(s)	900, 1104, 1152, 1949
Tru9I	TTAA	4 cut(s)	900, 1104, 1152, 1949
TscAI	CASTG	1 cut(s)	1505
TseFI	GTSAC	3 cut(s)	466, 698, 1513
TseI	GCWGC	9 cut(s)	397, 400, 403, 406, 424, 442, 1126, 1225, 1488
Tsp45I	GTSAC	3 cut(s)	466, 698, 1513
TspDTI	ATGAA	4 cut(s)	992, 1395, 1415, 1995
TspGWI	ACGGA	2 cut(s)	491, 613
TspMI	CCCGGG	1 cut(s)	600
TspRI	CASTG	1 cut(s)	1505
Tth111I	GACNNNGTC	2 cut(s)	239, 341
Van91I	CCANNNNNTGG	1 cut(s)	925
Vha464I	CTTAAG	1 cut(s)	1151
VneI	GTGCAC	1 cut(s)	912
VpaK11BI	GGWCC	9 cut(s)	91, 235, 352, 487, 597, 634, 675, 1279, 1476
XapI	RAATTY	1 cut(s)	1656
XceI	RCATGY	1 cut(s)	1601
XhoI	CTCGAG	1 cut(s)	1055
XmaI	CCCGGG	1 cut(s)	600
XmiI	GTMKAC	2 cut(s)	243, 1622
XspI	CTAG	1 cut(s)	65
Zsp2I	ATGCAT	1 cut(s)	963

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.