Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0009622

Physical Location & Seq

Genomic Coordinates Reverse (-)

12882860 .. 12885305

Gene Structure 2446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG069200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGCCCATCTCTCTTTCTACTCAAACCCACTTCTTTCCTTTGACCATGGGCTCTCTCCTCCCAATTCTTGACCTCAATGCCTCCCCTCAATCCGTCCCCAATTCAACCCTAGCCACCGCCACCATATCCCTCAAGGTCCCCAAAATCGAGCCCAAGCCCGAACCTTGCGACGACCCAGCTCCCCAACCCCCCTTCGATCCCAGCCCCAGCTCCGACATTTTCCCCAATCCCCAAACTGCCCCTCTCCCCCTCCCCCACCAGACCTCGATCGTCGCCGCCGCGCCGGACCACGTCTACTCCGAGTTCCACCGCATTTCGGAGCTCTTCCACACCGCCTTCGCGAAAGGGATTCAGAACTGCGACGGCGGCGGCGGCGGCGGCGGCCGTGGAGACGAGGACGGCGTCGTTCTGGACCCGGAGTCCGGCGCGATTGTTCCCGTGGAGGAGAACAACCAGCAGCAGCAGCTGGCGGAGGTCGTGCAGCGGAAGAAGTACCCGCAGCGGTCGAACGAGCTGGTCCGGGTCACCGATCTCAGCGACGAGGACCACCGCTACTTCCGTGAGGTCGTCAGGAAGACCCGGATGCTCTACGATTCGATTCGGATCCTCTCGGTGGCGGAGGAGGACAAGAAGAATCCGGGTCAGGGGAAACGGACCCGGGGCGACCTGCGGGCCGCCTCCGTGCTCCGGGACCGTGGGCTCTGGCTCAACCGTGATAAGCGGATTGTGGGGTCCATTCCGGGAGTCTATGTTGGTGACCTCTTCTTCTTTCGCATGGAGCTATGTGTGGTTGGGATACACGGACAAGTCCAAGCTGGAATTGACTATCTTCCGGGGAGCCAGAGCTCGAATAGGGAGCCGATTGCGACGAGCATTATCGTCTCCGGCGGGTACGAGGACGATGAGGATGCTGGGGATATTATTATCTACACAGGACATGGAGGGCAGGACAAGTTTAATAGGCAATGTGCACACCAGAAGCTGGAGGGTGGGAACTTGGCGTTGGAGAGGAGTATGCATTACGGGATTGAAGTGAGGGTTATTAGGGGGAGGAAGATTCATGGAGCTGTTTCGAGTAAGGTGTATGTTTATGATGGTTTGTATAGGATTCTTGAAACTTGGCTTGATGTTGGGAAGTCGGGGTTTGGTGTTTATAAGTTTAAGCTTTTGAGAATCGAGGGGCAGCCTGAGATGGGGAGCTCCGTTCTTAAGTTTGCTGAGAGTCTTAGGAGTAGGCCGTTGAGTGTGAGGCCGAGGGGTTATCTTAGTTTGGATCTTTCGCAGCAGAGGGAGAAGATTCCGGTGTTGCTTTTCAATGACATTGATGCTGATCAGGACCCCTTGTATTATGAGTATCTTAGGACACCTGCATTTCCAACTCATGTGTATCATCAGTCGGCAAATGGAACTGGCTGTGAATGTGTTAACGGTTGTAATGAAAATTGCTTTTGTGCTATGAAAAATGGAGGGGAGTTTCCTTATGATCAGAATGGGTTTCTTCTGAGGGGGAAGCCTGTGGTATTTGAGTGTGGGACCTTCTGCCGTTGCCCCCCGCAGTGTCGAAATCGTGTCACCCAACATGGATTGAGAAATAGACTGGAAGTGTTTAGATCAAGGGAAACAGGTTGGGGGGTTAGGTCTTTGGACTTGATACATGCCGGCGCTTTTATATGTGAGTATACAGGAGTTATTCTCACGAGGGAGCAGGCTCAAATTTTTTCCATGGATGGTGATAGCTTGATCTATCCCCATCGGTTTTCTGATAAATGGGCAGAATGGGGAGATTTATCTCAGATCTATCCTGATTATGCGCGTCCAACTTATCCGGCAATCCCACCGCTGGATTTTGCAATGGATGTGTCAAAAATGAGGAATGTTGCTTGTTATATGAGCCAGAGTACCACTCCAAATGTGATGGTGCAGTTCGTTCTATTTGATCACAACAACTTGATGTTTCCTCATCTTATGCTATTTGCAATGGAGAACATTCCTCCTCTGAGGGAGTTAAGCCTTGACTATGGGGTGGCGGTGGCTGATGAATGGACAGGGAAACTTGCTATCTGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0046483 GO:0048519 GO:0050789 GO:0051276 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080188 GO:0090304 GO:0098687 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

689

Amino Acids

77.02

Weight (kDa)

5.88

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	243 - 395	3.7e-52	SAD/SRA domain
Pre-SET	PF05033	427 - 523	2.5e-20	Pre-SET motif
SET	PF00856	542 - 674	4.2e-11	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13460 AT4G13460
fragaria_vesca	FvH4_2g20121
malus_domestica	MD13G1224000.v1.1 MD16G1228800.v1.1
prunus_persica	Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1
pyrus_communis	pycom13g19790
rosa_chinensis	RchiOBHm_Chr4g0395951
rosa_laevigata	RLG00000009586
rosa_multiflora	Rmu_sc0001103.1_g000009
rosa_roxburghii	Rroxscaffold_5G00340700
rosa_rugosa	Rorug03G0353200 Rorug03G0353300
rosa_samantha	Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100
rosa_wichuraiana	Rw4G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1155
AarI	CACCTGC	1 cut(s)	1375
Acc36I	ACCTGC	2 cut(s)	675, 1375
AccB7I	CCANNNNNTGG	1 cut(s)	982
AccI	GTMKAC	2 cut(s)	294, 1679
AccII	CGCG	4 cut(s)	281, 341, 428, 1813
AclWI	GGATC	4 cut(s)	191, 598, 611, 1281
AcoI	YGGCCR	1 cut(s)	382
AcsI	RAATTY	1 cut(s)	1713
AcyI	GRCGYC	1 cut(s)	402
AfaI	GTAC	3 cut(s)	494, 893, 1900
AfiI	CCNNNNNNNGG	8 cut(s)	316, 422, 613, 644, 687, 982, 1193, 1840
AflII	CTTAAG	1 cut(s)	1208
AgsI	TTSAA	4 cut(s)	105, 1031, 1115, 1315
AhdI	GACNNNNNGTC	1 cut(s)	418
AjiI	CACGTC	1 cut(s)	292
AjuI	GAANNNNNNNTTGG	2 cut(s)	986, 1018
Alw21I	GWGCWC	5 cut(s)	324, 687, 848, 973, 1202
Alw26I	GTCTC	2 cut(s)	384, 886
Alw44I	GTGCAC	1 cut(s)	969
AlwI	GGATC	4 cut(s)	191, 598, 611, 1281
AlwNI	CAGNNNCTG	2 cut(s)	466, 982
Ama87I	CYCGRG	1 cut(s)	657
AoxI	GGCC	4 cut(s)	382, 672, 1235, 1250
ApaLI	GTGCAC	1 cut(s)	969
ApeKI	GCWGC	7 cut(s)	457, 460, 463, 481, 499, 1183, 1282
ApoI	RAATTY	1 cut(s)	1713
AspLEI	GCGC	4 cut(s)	283, 428, 1664, 1813
AsuC2I	CCSGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
AsuHPI	GGTGA	4 cut(s)	517, 767, 1564, 1742
AvaI	CYCGRG	1 cut(s)	657
BaeGI	GKGCMC	1 cut(s)	973
BamHI	GGATCC	1 cut(s)	603
BanII	GRGCYC	6 cut(s)	53, 153, 324, 702, 848, 1202
BauI	CACGAG	1 cut(s)	1696
BbsI	GAAGAC	1 cut(s)	581
Bbv12I	GWGCWC	5 cut(s)	324, 687, 848, 973, 1202
BbvI	GCAGC	7 cut(s)	469, 472, 475, 493, 511, 1195, 1294
BccI	CCATC	6 cut(s)	14, 1088, 1186, 1721, 1758, 1909
BceAI	ACGGC	5 cut(s)	369, 379, 415, 1222, 1527
BcgI	CGANNNNNNTGC	2 cut(s)	890, 924
BciVI	GTATCC	1 cut(s)	789
BclI	TGATCA	3 cut(s)	1330, 1483, 1936
BcnI	CCSGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
BcoDI	GTCTC	2 cut(s)	384, 886
BfaI	CTAG	1 cut(s)	110
BfoI	RGCGCY	1 cut(s)	1665
BfrI	CTTAAG	1 cut(s)	1208
BfuAI	ACCTGC	2 cut(s)	675, 1375
BfuI	GTATCC	1 cut(s)	789
BglII	AGATCT	1 cut(s)	1794
Bme1390I	CCNGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
BmeRI	GACNNNNNGTC	1 cut(s)	418
BmeT110I	CYCGRG	1 cut(s)	657
BmgBI	CACGTC	1 cut(s)	292
BmrFI	CCNGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
BmsI	GCATC	3 cut(s)	573, 898, 1315
BpiI	GAAGAC	1 cut(s)	581
BplI	GAGNNNNNCTC	4 cut(s)	1677, 1709, 1888, 1920
BpmI	CTGGAG	1 cut(s)	1004
BpuEI	CTTGAG	1 cut(s)	116
BpuMI	CCSGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
BsaBI	GATNNNNATC	2 cut(s)	602, 1329
BsaHI	GRCGYC	1 cut(s)	402
BsaJI	CCNNGG	9 cut(s)	45, 385, 438, 657, 658, 694, 833, 1253, 1722
BsaWI	WCCGGW	1 cut(s)	1300
BsaXI	ACNNNNNCTCC	4 cut(s)	281, 311, 735, 765
Bsc4I	CCNNNNNNNGG	8 cut(s)	316, 422, 613, 644, 687, 982, 1193, 1840
Bse118I	RCCGGY	1 cut(s)	1658
Bse1I	ACTGG	2 cut(s)	1414, 1602
Bse3DI	GCAATG	3 cut(s)	971, 1857, 1983
Bse8I	GATNNNNATC	2 cut(s)	602, 1329
BseDI	CCNNGG	9 cut(s)	45, 385, 438, 657, 658, 694, 833, 1253, 1722
BseGI	GGATG	4 cut(s)	588, 913, 1732, 1861
BseJI	GATNNNNATC	2 cut(s)	602, 1329
BseLI	CCNNNNNNNGG	8 cut(s)	316, 422, 613, 644, 687, 982, 1193, 1840
BseMI	GCAATG	3 cut(s)	971, 1857, 1983
BseMII	CTCAG	6 cut(s)	547, 1179, 1209, 1493, 1805, 1988
BseNI	ACTGG	2 cut(s)	1414, 1602
BseRI	GAGGAG	5 cut(s)	47, 458, 635, 1024, 1983
BseSI	GKGCMC	1 cut(s)	973
BseX3I	CGGCCG	1 cut(s)	382
BseXI	GCAGC	7 cut(s)	469, 472, 475, 493, 511, 1195, 1294
BseYI	CCCAGC	4 cut(s)	175, 200, 206, 911
BsgI	GTGCAG	2 cut(s)	500, 1940
Bsh1236I	CGCG	4 cut(s)	281, 341, 428, 1813
Bsh1285I	CGRYCG	3 cut(s)	270, 385, 506
BshFI	GGCC	4 cut(s)	384, 674, 1237, 1252
BsiEI	CGRYCG	3 cut(s)	270, 385, 506
BsiHKAI	GWGCWC	5 cut(s)	324, 687, 848, 973, 1202
BsiHKCI	CYCGRG	1 cut(s)	657
BslFI	GGGAC	4 cut(s)	80, 122, 704, 1546
BslI	CCNNNNNNNGG	8 cut(s)	316, 422, 613, 644, 687, 982, 1193, 1840
BsmAI	GTCTC	2 cut(s)	384, 886
BsmBI	CGTCTC	2 cut(s)	384, 886
BsmFI	GGGAC	4 cut(s)	80, 122, 704, 1546
BsnI	GGCC	4 cut(s)	384, 674, 1237, 1252
BsoBI	CYCGRG	1 cut(s)	657
Bsp1286I	GDGCHC	8 cut(s)	53, 153, 324, 687, 702, 848, 973, 1202
Bsp19I	CCATGG	2 cut(s)	45, 1722
Bsp68I	TCGCGA	1 cut(s)	341
BspANI	GGCC	4 cut(s)	384, 674, 1237, 1252
BspCNI	CTCAG	6 cut(s)	546, 1180, 1210, 1494, 1804, 1989
BspFNI	CGCG	4 cut(s)	281, 341, 428, 1813
BspMI	ACCTGC	2 cut(s)	675, 1375
BspPI	GGATC	4 cut(s)	191, 598, 611, 1281
BspQI	GCTCTTC	1 cut(s)	329
BspTI	CTTAAG	1 cut(s)	1208
BsrDI	GCAATG	3 cut(s)	971, 1857, 1983
BsrFI	RCCGGY	1 cut(s)	1658
BsrI	ACTGG	2 cut(s)	1414, 1602
BssAI	RCCGGY	1 cut(s)	1658
BssECI	CCNNGG	9 cut(s)	45, 385, 438, 657, 658, 694, 833, 1253, 1722
BssNAI	GTATAC	1 cut(s)	1680
BssNI	GRCGYC	1 cut(s)	402
BssSI	CACGAG	1 cut(s)	1696
BssT1I	CCWWGG	2 cut(s)	45, 1722
Bst1107I	GTATAC	1 cut(s)	1680
Bst2BI	CACGAG	1 cut(s)	1696
Bst4CI	ACNGT	3 cut(s)	695, 713, 1430
Bst6I	CTCTTC	2 cut(s)	329, 767
BstACI	GRCGYC	1 cut(s)	402
BstAFI	CTTAAG	1 cut(s)	1208
BstC8I	GCNNGC	4 cut(s)	468, 672, 1660, 1707
BstDEI	CTNAG	9 cut(s)	533, 1188, 1218, 1226, 1265, 1358, 1502, 1791, 1997
BstDSI	CCRYGG	5 cut(s)	45, 385, 438, 694, 1722
BstEII	GGTNACC	2 cut(s)	523, 755
BstF5I	GGATG	4 cut(s)	588, 913, 1732, 1861
BstFNI	CGCG	4 cut(s)	281, 341, 428, 1813
BstH2I	RGCGCY	1 cut(s)	1665
BstHHI	GCGC	4 cut(s)	283, 428, 1664, 1813
BstMAI	GTCTC	2 cut(s)	384, 886
BstMCI	CGRYCG	3 cut(s)	270, 385, 506
BstMWI	GCNNNNNNNGC	6 cut(s)	366, 372, 375, 378, 381, 463
BstNSI	RCATGY	1 cut(s)	1658
BstPI	GGTNACC	2 cut(s)	523, 755
BstSCI	CCNGG	9 cut(s)	414, 519, 578, 637, 656, 657, 687, 739, 832
BstSLI	GKGCMC	1 cut(s)	973
BstUI	CGCG	4 cut(s)	281, 341, 428, 1813
BstV1I	GCAGC	7 cut(s)	469, 472, 475, 493, 511, 1195, 1294
BstV2I	GAAGAC	1 cut(s)	581
BstX2I	RGATCY	3 cut(s)	603, 1273, 1794
BstYI	RGATCY	3 cut(s)	603, 1273, 1794
BstZ17I	GTATAC	1 cut(s)	1680
BstZI	CGGCCG	1 cut(s)	382
BsuI	GTATCC	1 cut(s)	789
BsuRI	GGCC	4 cut(s)	384, 674, 1237, 1252
BtgI	CCRYGG	5 cut(s)	45, 385, 438, 694, 1722
BtrI	CACGTC	1 cut(s)	292
BtsCI	GGATG	4 cut(s)	588, 913, 1732, 1861
BtsI	GCAGTG	1 cut(s)	1562
BtsIMutI	CAGTG	1 cut(s)	1562
BtuMI	TCGCGA	1 cut(s)	341
BveI	ACCTGC	2 cut(s)	675, 1375
Cac8I	GCNNGC	4 cut(s)	468, 672, 1660, 1707
CaiI	CAGNNNCTG	2 cut(s)	466, 982
CfoI	GCGC	4 cut(s)	283, 428, 1664, 1813
Cfr10I	RCCGGY	1 cut(s)	1658
Cfr9I	CCCGGG	1 cut(s)	657
CseI	GACGC	2 cut(s)	391, 1802
Csp6I	GTAC	3 cut(s)	493, 892, 1899
CviAII	CATG	8 cut(s)	46, 775, 938, 1061, 1382, 1580, 1655, 1723
CviQI	GTAC	3 cut(s)	493, 892, 1899
DdeI	CTNAG	9 cut(s)	533, 1188, 1218, 1226, 1265, 1358, 1502, 1791, 1997
DriI	GACNNNNNGTC	1 cut(s)	418
EaeI	YGGCCR	1 cut(s)	382
EagI	CGGCCG	1 cut(s)	382
Eam1104I	CTCTTC	2 cut(s)	329, 767
Eam1105I	GACNNNNNGTC	1 cut(s)	418
EarI	CTCTTC	2 cut(s)	329, 767
EciI	GGCGGA	2 cut(s)	485, 632
Ecl136II	GAGCTC	3 cut(s)	322, 846, 1200
EclXI	CGGCCG	1 cut(s)	382
Eco130I	CCWWGG	2 cut(s)	45, 1722
Eco24I	GRGCYC	6 cut(s)	53, 153, 324, 702, 848, 1202
Eco52I	CGGCCG	1 cut(s)	382
Eco53kI	GAGCTC	3 cut(s)	322, 846, 1200
Eco88I	CYCGRG	1 cut(s)	657
Eco91I	GGTNACC	2 cut(s)	523, 755
EcoICRI	GAGCTC	3 cut(s)	322, 846, 1200
EcoO109I	RGGNCCY	3 cut(s)	136, 1336, 1533
EcoO65I	GGTNACC	2 cut(s)	523, 755
EcoT14I	CCWWGG	2 cut(s)	45, 1722
EcoT22I	ATGCAT	1 cut(s)	1020
EcoT38I	GRGCYC	6 cut(s)	53, 153, 324, 702, 848, 1202
ErhI	CCWWGG	2 cut(s)	45, 1722
Esp3I	CGTCTC	2 cut(s)	384, 886
FaeI	CATG	8 cut(s)	49, 778, 941, 1064, 1385, 1583, 1658, 1726
FaqI	GGGAC	4 cut(s)	80, 122, 704, 1546
FatI	CATG	8 cut(s)	45, 774, 937, 1060, 1381, 1579, 1654, 1722
FauI	CCCGC	4 cut(s)	504, 663, 881, 1560
FbaI	TGATCA	3 cut(s)	1330, 1483, 1936
FblI	GTMKAC	2 cut(s)	294, 1679
FokI	GGATG	4 cut(s)	595, 920, 1739, 1868
FriOI	GRGCYC	6 cut(s)	53, 153, 324, 702, 848, 1202
FspBI	CTAG	1 cut(s)	110
GlaI	GCGC	4 cut(s)	282, 427, 1663, 1812
GsaI	CCCAGC	4 cut(s)	179, 204, 210, 915
GsuI	CTGGAG	1 cut(s)	1004
HaeII	RGCGCY	1 cut(s)	1665
HaeIII	GGCC	4 cut(s)	384, 674, 1237, 1252
HgaI	GACGC	2 cut(s)	391, 1802
HhaI	GCGC	4 cut(s)	283, 428, 1664, 1813
Hin1I	GRCGYC	1 cut(s)	402
Hin1II	CATG	8 cut(s)	49, 778, 941, 1064, 1385, 1583, 1658, 1726
Hin6I	GCGC	4 cut(s)	281, 426, 1662, 1811
HinP1I	GCGC	4 cut(s)	281, 426, 1662, 1811
HincII	GTYRAC	1 cut(s)	1426
HindII	GTYRAC	1 cut(s)	1426
HindIII	AAGCTT	1 cut(s)	1163
HpaI	GTTAAC	1 cut(s)	1426
HphI	GGTGA	4 cut(s)	517, 767, 1564, 1742
Hpy166II	GTNNAC	4 cut(s)	295, 971, 1426, 1680
Hpy188III	TCNNGA	8 cut(s)	68, 340, 410, 571, 1112, 1334, 1696, 1802
Hpy8I	GTNNAC	4 cut(s)	295, 971, 1426, 1680
Hpy99I	CGWCG	6 cut(s)	173, 275, 365, 407, 542, 871
HpyAV	CCTTC	3 cut(s)	202, 346, 1546
HpyCH4III	ACNGT	3 cut(s)	695, 713, 1430
HpyCH4IV	ACGT	1 cut(s)	291
HpyCH4V	TGCA	7 cut(s)	481, 971, 1018, 1370, 1850, 1921, 1976
HpyF10VI	GCNNNNNNNGC	6 cut(s)	366, 372, 375, 378, 381, 463
HpyF3I	CTNAG	9 cut(s)	533, 1188, 1218, 1226, 1265, 1358, 1502, 1791, 1997
HpySE526I	ACGT	1 cut(s)	291
Hsp92I	GRCGYC	1 cut(s)	402
Hsp92II	CATG	8 cut(s)	49, 778, 941, 1064, 1385, 1583, 1658, 1726
HspAI	GCGC	4 cut(s)	281, 426, 1662, 1811
KroI	GCCGGC	1 cut(s)	1658
KroNI	GCCGGC	1 cut(s)	1660
Ksp22I	TGATCA	3 cut(s)	1330, 1483, 1936
KspAI	GTTAAC	1 cut(s)	1426
LguI	GCTCTTC	1 cut(s)	329
Lsp1109I	GCAGC	7 cut(s)	469, 472, 475, 493, 511, 1195, 1294
LweI	GCATC	3 cut(s)	573, 898, 1315
MaeI	CTAG	1 cut(s)	110
MaeII	ACGT	1 cut(s)	291
MaeIII	GTNAC	4 cut(s)	523, 755, 1570, 2063
MflI	RGATCY	3 cut(s)	603, 1273, 1794
MhlI	GDGCHC	8 cut(s)	53, 153, 324, 687, 702, 848, 973, 1202
MluCI	AATT	5 cut(s)	63, 100, 819, 1441, 1713
MlyI	GAGTC	3 cut(s)	428, 753, 1231
MmeI	TCCRAC	4 cut(s)	237, 984, 1400, 1841
Mph1103I	ATGCAT	1 cut(s)	1020
MroNI	GCCGGC	1 cut(s)	1658
MseI	TTAA	5 cut(s)	957, 1161, 1209, 1425, 2006
MspA1I	CMGCKG	4 cut(s)	466, 484, 502, 1840
MspCI	CTTAAG	1 cut(s)	1208
MspR9I	CCNGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
MvnI	CGCG	4 cut(s)	281, 341, 428, 1813
MwoI	GCNNNNNNNGC	6 cut(s)	366, 372, 375, 378, 381, 463
NaeI	GCCGGC	1 cut(s)	1660
NciI	CCSGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
NcoI	CCATGG	2 cut(s)	45, 1722
NgoMIV	GCCGGC	1 cut(s)	1658
NlaIII	CATG	8 cut(s)	49, 778, 941, 1064, 1385, 1583, 1658, 1726
NmeAIII	GCCGAG	1 cut(s)	1278
NmuCI	GTSAC	3 cut(s)	523, 755, 1570
NruI	TCGCGA	1 cut(s)	341
NsiI	ATGCAT	1 cut(s)	1020
NspI	RCATGY	1 cut(s)	1658
PaqCI	CACCTGC	1 cut(s)	1375
PciSI	GCTCTTC	1 cut(s)	329
PcsI	WCGNNNNNNNCGW	2 cut(s)	297, 399
PdiI	GCCGGC	1 cut(s)	1660
PfeI	GAWTC	8 cut(s)	349, 593, 598, 634, 1057, 1108, 1173, 1297
PflFI	GACNNNGTC	2 cut(s)	290, 401
PflMI	CCANNNNNTGG	1 cut(s)	982
PfoI	TCCNGGA	2 cut(s)	687, 739
Ple19I	CGATCG	1 cut(s)	270
PleI	GAGTC	3 cut(s)	427, 752, 1230
PpsI	GAGTC	3 cut(s)	427, 752, 1230
PpuMI	RGGWCCY	3 cut(s)	136, 1336, 1533
PsiI	TTATAA	1 cut(s)	1155
Psp124BI	GAGCTC	3 cut(s)	324, 848, 1202
Psp5II	RGGWCCY	3 cut(s)	136, 1336, 1533
PspEI	GGTNACC	2 cut(s)	523, 755
PspFI	CCCAGC	4 cut(s)	175, 200, 206, 911
PspPPI	RGGWCCY	3 cut(s)	136, 1336, 1533
PstNI	CAGNNNCTG	2 cut(s)	466, 982
PsuI	RGATCY	3 cut(s)	603, 1273, 1794
PsyI	GACNNNGTC	2 cut(s)	290, 401
PvuI	CGATCG	1 cut(s)	270
PvuII	CAGCTG	1 cut(s)	466
RruI	TCGCGA	1 cut(s)	341
RsaI	GTAC	3 cut(s)	494, 893, 1900
RsaNI	GTAC	3 cut(s)	493, 892, 1899
SacI	GAGCTC	3 cut(s)	324, 848, 1202
SapI	GCTCTTC	1 cut(s)	329
SaqAI	TTAA	5 cut(s)	957, 1161, 1209, 1425, 2006
SchI	GAGTC	3 cut(s)	428, 753, 1231
ScrFI	CCNGG	9 cut(s)	416, 521, 580, 639, 658, 659, 689, 741, 834
SduI	GDGCHC	8 cut(s)	53, 153, 324, 687, 702, 848, 973, 1202
SfaNI	GCATC	3 cut(s)	573, 898, 1315
SmaI	CCCGGG	1 cut(s)	659
SmlI	CTYRAG	2 cut(s)	131, 1208
SmoI	CTYRAG	2 cut(s)	131, 1208
Sse9I	AATT	5 cut(s)	63, 100, 819, 1441, 1713
SspMI	CTAG	1 cut(s)	110
SstI	GAGCTC	3 cut(s)	324, 848, 1202
StyD4I	CCNGG	9 cut(s)	414, 519, 578, 637, 656, 657, 687, 739, 832
StyI	CCWWGG	2 cut(s)	45, 1722
TaaI	ACNGT	3 cut(s)	695, 713, 1430
TaiI	ACGT	1 cut(s)	294
TaqI	TCGA	9 cut(s)	147, 195, 266, 506, 596, 848, 1073, 1176, 1561
TasI	AATT	5 cut(s)	63, 100, 819, 1441, 1713
TauI	GCSGC	9 cut(s)	278, 281, 369, 372, 375, 378, 381, 384, 677
TfiI	GAWTC	8 cut(s)	349, 593, 598, 634, 1057, 1108, 1173, 1297
Tru1I	TTAA	5 cut(s)	957, 1161, 1209, 1425, 2006
Tru9I	TTAA	5 cut(s)	957, 1161, 1209, 1425, 2006
TscAI	CASTG	1 cut(s)	1562
TseFI	GTSAC	3 cut(s)	523, 755, 1570
TseI	GCWGC	7 cut(s)	457, 460, 463, 481, 499, 1183, 1282
Tsp45I	GTSAC	3 cut(s)	523, 755, 1570
TspDTI	ATGAA	4 cut(s)	1049, 1452, 1472, 2052
TspGWI	ACGGA	6 cut(s)	82, 548, 667, 670, 816, 1192
TspMI	CCCGGG	1 cut(s)	657
TspRI	CASTG	1 cut(s)	1562
Tth111I	GACNNNGTC	2 cut(s)	290, 401
Van91I	CCANNNNNTGG	1 cut(s)	982
Vha464I	CTTAAG	1 cut(s)	1208
VneI	GTGCAC	1 cut(s)	969
XapI	RAATTY	1 cut(s)	1713
XceI	RCATGY	1 cut(s)	1658
XmaI	CCCGGG	1 cut(s)	657
XmiI	GTMKAC	2 cut(s)	294, 1679
XspI	CTAG	1 cut(s)	110
Zsp2I	ATGCAT	1 cut(s)	1020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.