Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0009622

Physical Location & Seq

Genomic Coordinates Reverse (-)

21848245 .. 21853552

Gene Structure 5308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1224000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGCTCTCTCATCCCAATTTTAGACCTCAATAACCTCCCAGAATCCGCCGCCGGCTCTACCCCAAACACTACCATCTCCACCGTATCCATGAAAGTCCCCAAAATCGAACCGAAGCTCGAACCTTTCGACGAACCACTCGATACCCACCTGCCCCAACTGCCTCCAGAACCCTTCATTTCCACTCCTACCCCCAACTCTCTCACCAATTCCCAAATTAACCCCTTCTCCGACCAGAACCACACCCCCGTATCTGATTCCTCCGCCGCACCCTCCGACCAGGAGAATGTATACTCGGAGTTCCATCGAATTTCCGAGCTTTTCCGAACTGCTTTTGCTAAAGGGCTCCAGAGTATCGGCGACGGCGAGGTCGAAGTATTGGACCCGGATGCGCGAGCAATTGTGCCCGTTCCTCAAGAAACCCAGATATCAGAGGCCGTCGTCGCGCGAAGGAAATACCCCAAGCGGTCCTCCGAGCTCGTCCGGGTGACCGATCTCAACATCGAGGACCAGAGGTACTTCCGTGACGTGGTGCGGAAAACCCGAATGCTTTACGACTCGATTCGGATACTGTCAGTGGCGGCGGAGGAGAAGCGGAACCCAGGAAACGGGAAGCGAGTCCGCGGCGACTTGCAGGCCGCCACGGCGCTCAGGGATCGTGGGTTGTGGCTCAATCGCGATAAAAGAATCGTGGGTTCGATTCCTGGGGTGTACGTTGGCGATCTCTTCTTTTTCCGCATGGAGTTGTGTGTGGTGGGTTTACATGGCCAAGTCCAAGCTGGCATCGACTATCTTCCAGCGAGTCAGAGCTCGAATCACGAGCCAATTGCAACCAGCATTATTGTTTCGGGTGGCTATGAGGACGACGAGGATGCTGGCGATGTGATTATCTACACCGGTCATGGAGGACAGGACAAGTTTAATAAACAATGTGCTCATCAGAAGCTGGAAGGTGGGAATTTGGCATTGGAGAGGAGCATGCATTATGGGATTGAAGTGAGAGTCATCCGAGGAATCAAATGCCAAGGTGGTATTTCACATAAGGTTTATGTTTATGATGGCTTGTATAGAATATTTGACTGTTGGTTTGATGTGGGGAAGTCGGGGTTTGGTGTTTATAAGTTTAAACTTCTGAGAATGGAAGGGCAAGGCGAGATGGGTAGCGCCATTCTTAAGTTTGCGGCTAGCCTTAGGGCCAGCCCATTGTCTGTGAGGCAGTCGGGGTATCTCAGTCTGGATATTTCTAATAAGAAGGAGAATGTTCCAGTTTTTCTGTTCAATGACATTGATTCTGACCAGGACCCCATGTATTATGAATACCTTGCGGCAACTGTGTTTCCAACACAAGTATTTCATCAGTCCGGGAAGGGGACCGGGTGTGATTGTGTTGACGGTTGTTTTGGTAACTGCTTTTGTGCTTTGAAAAATGGAGGCGAGTTTGCCTATGATGACAATGGGTGTCTTTTGAGAGGGAAGCCTGTGGTTTTTGAGTGCGGGCCCTTCTGCCATTGTCCCCCGACATGCCGGAATCGTGTCACTCAAAAAGGTATGAGAAATAGATTGGAAGTGTTTAGATCGAGGGAAACAGGTTGGGGAGTTAGGTCCTTGGACCTGATACATGCCGGGGCCTTTATATGTGAGTATACAGGGGTTATTCTCACTAGGGAAATGGCTCAAATATTTGCAATGAATGGTGATACCTTGGTTTATCCACATCGTCCGAATGTGATGGTGCAGTTTGTACTGTATGATCACAATAATTTGATGTTTCCTCATCTCATGCTGTTCGCAATGGAGAACATCCCTCCTATGAGGGAGTTGAGCCTTGACTACGGGGTGGCTACTGTGTCTGAGGCTGATGAATGGACAGGAAAACTTGCTATCTGTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0046483 GO:0048519 GO:0050789 GO:0051276 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080188 GO:0090304 GO:0098687 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

631

Amino Acids

70.08

Weight (kDa)

5.67

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	231 - 383	1.2e-53	SAD/SRA domain
Pre-SET	PF05033	415 - 511	6.1e-21	Pre-SET motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13460 AT4G13460
fragaria_vesca	FvH4_2g20121
malus_domestica	MD13G1224000.v1.1 MD16G1228800.v1.1
prunus_persica	Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1
pyrus_communis	pycom13g19790
rosa_chinensis	RchiOBHm_Chr4g0395951
rosa_laevigata	RLG00000009586
rosa_multiflora	Rmu_sc0001103.1_g000009
rosa_roxburghii	Rroxscaffold_5G00340700
rosa_rugosa	Rorug03G0353200 Rorug03G0353300
rosa_samantha	Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100
rosa_wichuraiana	Rw4G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
AarI	CACCTGC	1 cut(s)	159
AasI	GACNNNNNNGTC	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	159
AccI	GTMKAC	2 cut(s)	291, 1643
AccII	CGCG	5 cut(s)	394, 446, 448, 624, 678
AclWI	GGATC	1 cut(s)	663
AcoI	YGGCCR	1 cut(s)	766
AcsI	RAATTY	2 cut(s)	309, 958
AfaI	GTAC	3 cut(s)	518, 713, 1743
AfiI	CCNNNNNNNGG	3 cut(s)	529, 608, 1368
AflII	CTTAAG	1 cut(s)	1172
AgeI	ACCGGT	1 cut(s)	896
AgsI	TTSAA	3 cut(s)	995, 1279, 1423
AjiI	CACGTC	1 cut(s)	529
AjnI	CCWGG	4 cut(s)	279, 601, 703, 1296
AjuI	GAANNNNNNNTTGG	2 cut(s)	950, 982
AluBI	AGCT	6 cut(s)	118, 319, 478, 779, 810, 946
AluI	AGCT	6 cut(s)	118, 319, 478, 779, 810, 946
Alw21I	GWGCWC	3 cut(s)	480, 812, 937
AlwI	GGATC	1 cut(s)	663
AlwNI	CAGNNNCTG	1 cut(s)	946
AoxI	GGCC	6 cut(s)	435, 636, 766, 1194, 1496, 1626
ApaI	GGGCCC	1 cut(s)	1500
ApoI	RAATTY	2 cut(s)	309, 958
ArsI	GACNNNNNNTTYG	4 cut(s)	1070, 1102, 1382, 1414
AsiGI	ACCGGT	1 cut(s)	896
AspLEI	GCGC	4 cut(s)	394, 448, 649, 1166
AsuC2I	CCSGG	5 cut(s)	386, 485, 1363, 1375, 1624
AsuHPI	GGTGA	3 cut(s)	196, 499, 1706
AsuNHI	GCTAGC	1 cut(s)	1184
AvaII	GGWCC	7 cut(s)	382, 468, 508, 1300, 1371, 1602, 1609
AxyI	CCTNAGG	1 cut(s)	1190
BaeGI	GKGCMC	2 cut(s)	408, 1500
BaeI	ACNNNNGTAYC	6 cut(s)	234, 267, 508, 541, 1689, 1722
BalI	TGGCCA	1 cut(s)	768
BanII	GRGCYC	5 cut(s)	8, 348, 480, 812, 1500
BauI	CACGAG	1 cut(s)	818
Bbv12I	GWGCWC	3 cut(s)	480, 812, 937
BccI	CCATC	5 cut(s)	83, 312, 1052, 1150, 1723
BceAI	ACGGC	3 cut(s)	379, 422, 660
BcgI	CGANNNNNNTGC	4 cut(s)	809, 843, 854, 888
BciT130I	CCWGG	4 cut(s)	281, 603, 705, 1298
BciVI	GTATCC	2 cut(s)	97, 561
BclI	TGATCA	1 cut(s)	1750
BcnI	CCSGG	5 cut(s)	386, 485, 1363, 1375, 1624
BfaI	CTAG	2 cut(s)	1185, 1662
BfoI	RGCGCY	2 cut(s)	650, 1167
BfrI	CTTAAG	1 cut(s)	1172
BfuAI	ACCTGC	1 cut(s)	159
BfuI	GTATCC	2 cut(s)	97, 561
BglI	GCCNNNNNGGC	1 cut(s)	644
BisI	GCNGC	7 cut(s)	51, 267, 582, 625, 639, 1182, 1326
BlsI	GCNGC	7 cut(s)	52, 268, 583, 626, 640, 1183, 1327
Bme1390I	CCNGG	9 cut(s)	281, 386, 485, 603, 705, 1298, 1363, 1375, 1624
Bme18I	GGWCC	7 cut(s)	382, 468, 508, 1300, 1371, 1602, 1609
BmgBI	CACGTC	1 cut(s)	529
BmiI	GGNNCC	7 cut(s)	347, 384, 599, 1302, 1372, 1498, 1627
BmrFI	CCNGG	9 cut(s)	281, 386, 485, 603, 705, 1298, 1363, 1375, 1624
BmsI	GCATC	3 cut(s)	379, 792, 862
BmtI	GCTAGC	1 cut(s)	1188
BpmI	CTGGAG	2 cut(s)	150, 332
Bpu10I	CCTNAGC	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	399
BpuMI	CCSGG	5 cut(s)	386, 485, 1363, 1375, 1624
BsaJI	CCNNGG	9 cut(s)	601, 622, 642, 704, 1009, 1024, 1605, 1623, 1701
BsaWI	WCCGGW	1 cut(s)	896
BsaXI	ACNNNNNCTCC	2 cut(s)	212, 242
Bsc4I	CCNNNNNNNGG	3 cut(s)	529, 608, 1368
Bse118I	RCCGGY	2 cut(s)	53, 896
Bse1I	ACTGG	1 cut(s)	1265
Bse21I	CCTNAGG	1 cut(s)	1190
Bse3DI	GCAATG	2 cut(s)	1692, 1797
BseBI	CCWGG	4 cut(s)	281, 603, 705, 1298
BseDI	CCNNGG	9 cut(s)	601, 622, 642, 704, 1009, 1024, 1605, 1623, 1701
BseGI	GGATG	5 cut(s)	12, 394, 877, 1005, 1800
BseLI	CCNNNNNNNGG	3 cut(s)	529, 608, 1368
BseMI	GCAATG	2 cut(s)	1692, 1797
BseMII	CTCAG	4 cut(s)	664, 1124, 1243, 1842
BseNI	ACTGG	1 cut(s)	1265
BseRI	GAGGAG	2 cut(s)	602, 988
BseSI	GKGCMC	2 cut(s)	408, 1500
BsgI	GTGCAG	1 cut(s)	1754
Bsh1236I	CGCG	5 cut(s)	394, 446, 448, 624, 678
BshFI	GGCC	6 cut(s)	437, 638, 768, 1196, 1498, 1628
BshTI	ACCGGT	1 cut(s)	896
BsiHKAI	GWGCWC	3 cut(s)	480, 812, 937
BsiSI	CCGG	8 cut(s)	54, 386, 484, 897, 1362, 1374, 1525, 1623
BslFI	GGGAC	3 cut(s)	83, 1384, 1497
BslI	CCNNNNNNNGG	3 cut(s)	529, 608, 1368
BsmFI	GGGAC	3 cut(s)	83, 1384, 1497
BsmI	GAATGC	1 cut(s)	552
BsnI	GGCC	6 cut(s)	437, 638, 768, 1196, 1498, 1628
Bsp120I	GGGCCC	1 cut(s)	1496
Bsp1286I	GDGCHC	7 cut(s)	8, 348, 408, 480, 812, 937, 1500
Bsp143I	GATC	5 cut(s)	493, 655, 721, 1574, 1750
Bsp68I	TCGCGA	1 cut(s)	678
BspANI	GGCC	6 cut(s)	437, 638, 768, 1196, 1498, 1628
BspCNI	CTCAG	4 cut(s)	663, 1125, 1242, 1843
BspFNI	CGCG	5 cut(s)	394, 446, 448, 624, 678
BspLI	GGNNCC	7 cut(s)	347, 384, 599, 1302, 1372, 1498, 1627
BspMI	ACCTGC	1 cut(s)	159
BspOI	GCTAGC	1 cut(s)	1188
BspPI	GGATC	1 cut(s)	663
BspTI	CTTAAG	1 cut(s)	1172
BsrDI	GCAATG	2 cut(s)	1692, 1797
BsrFI	RCCGGY	2 cut(s)	53, 896
BsrI	ACTGG	1 cut(s)	1265
BssAI	RCCGGY	2 cut(s)	53, 896
BssECI	CCNNGG	9 cut(s)	601, 622, 642, 704, 1009, 1024, 1605, 1623, 1701
BssMI	GATC	5 cut(s)	493, 655, 721, 1574, 1750
BssNAI	GTATAC	2 cut(s)	292, 1644
BssSI	CACGAG	1 cut(s)	818
BssT1I	CCWWGG	3 cut(s)	1024, 1605, 1701
Bst1107I	GTATAC	2 cut(s)	292, 1644
Bst2BI	CACGAG	1 cut(s)	818
Bst2UI	CCWGG	4 cut(s)	281, 603, 705, 1298
Bst4CI	ACNGT	7 cut(s)	85, 573, 1082, 1333, 1394, 1746, 1846
Bst6I	CTCTTC	1 cut(s)	731
BstAFI	CTTAAG	1 cut(s)	1172
BstC8I	GCNNGC	9 cut(s)	55, 396, 636, 781, 877, 980, 1186, 1198, 1496
BstDEI	CTNAG	5 cut(s)	650, 1133, 1190, 1229, 1851
BstDSI	CCRYGG	2 cut(s)	622, 642
BstEII	GGTNACC	1 cut(s)	487
BstF5I	GGATG	5 cut(s)	12, 394, 877, 1005, 1800
BstFNI	CGCG	5 cut(s)	394, 446, 448, 624, 678
BstH2I	RGCGCY	2 cut(s)	650, 1167
BstHHI	GCGC	4 cut(s)	394, 448, 649, 1166
BstKTI	GATC	5 cut(s)	496, 658, 724, 1577, 1753
BstMBI	GATC	5 cut(s)	493, 655, 721, 1574, 1750
BstMWI	GCNNNNNNNGC	3 cut(s)	160, 443, 644
BstNI	CCWGG	4 cut(s)	281, 603, 705, 1298
BstNSI	RCATGY	3 cut(s)	982, 1524, 1622
BstPI	GGTNACC	1 cut(s)	487
BstSCI	CCNGG	9 cut(s)	279, 384, 483, 601, 703, 1296, 1361, 1373, 1622
BstSLI	GKGCMC	2 cut(s)	408, 1500
BstUI	CGCG	5 cut(s)	394, 446, 448, 624, 678
BstZ17I	GTATAC	2 cut(s)	292, 1644
Bsu36I	CCTNAGG	1 cut(s)	1190
BsuI	GTATCC	2 cut(s)	97, 561
BsuRI	GGCC	6 cut(s)	437, 638, 768, 1196, 1498, 1628
BtgI	CCRYGG	2 cut(s)	622, 642
BtgZI	GCGATG	1 cut(s)	894
BtrI	CACGTC	1 cut(s)	529
BtsCI	GGATG	5 cut(s)	12, 394, 877, 1005, 1800
BtsIMutI	CAGTG	1 cut(s)	582
BtuMI	TCGCGA	1 cut(s)	678
BveI	ACCTGC	1 cut(s)	159
Cac8I	GCNNGC	9 cut(s)	55, 396, 636, 781, 877, 980, 1186, 1198, 1496
CaiI	CAGNNNCTG	1 cut(s)	946
CfoI	GCGC	4 cut(s)	394, 448, 649, 1166
Cfr10I	RCCGGY	2 cut(s)	53, 896
Cfr42I	CCGCGG	1 cut(s)	625
Csp6I	GTAC	3 cut(s)	517, 712, 1742
CspAI	ACCGGT	1 cut(s)	896
CviAII	CATG	9 cut(s)	91, 739, 764, 902, 979, 1306, 1521, 1619, 1780
CviQI	GTAC	3 cut(s)	517, 712, 1742
DdeI	CTNAG	5 cut(s)	650, 1133, 1190, 1229, 1851
DpnI	GATC	5 cut(s)	495, 657, 723, 1576, 1752
DpnII	GATC	5 cut(s)	493, 655, 721, 1574, 1750
DraI	TTTAAA	1 cut(s)	1126
DrdI	GACNNNNNNGTC	1 cut(s)	368
DseDI	GACNNNNNNGTC	1 cut(s)	368
EaeI	YGGCCR	1 cut(s)	766
Eam1104I	CTCTTC	1 cut(s)	731
EarI	CTCTTC	1 cut(s)	731
EciI	GGCGGA	3 cut(s)	37, 253, 599
Ecl136II	GAGCTC	2 cut(s)	478, 810
Eco130I	CCWWGG	3 cut(s)	1024, 1605, 1701
Eco24I	GRGCYC	5 cut(s)	8, 348, 480, 812, 1500
Eco32I	GATATC	1 cut(s)	429
Eco47I	GGWCC	7 cut(s)	382, 468, 508, 1300, 1371, 1602, 1609
Eco53kI	GAGCTC	2 cut(s)	478, 810
Eco81I	CCTNAGG	1 cut(s)	1190
Eco91I	GGTNACC	1 cut(s)	487
EcoICRI	GAGCTC	2 cut(s)	478, 810
EcoO109I	RGGNCCY	4 cut(s)	1300, 1497, 1602, 1626
EcoO65I	GGTNACC	1 cut(s)	487
EcoRII	CCWGG	4 cut(s)	279, 601, 703, 1296
EcoRV	GATATC	1 cut(s)	429
EcoT14I	CCWWGG	3 cut(s)	1024, 1605, 1701
EcoT22I	ATGCAT	1 cut(s)	984
EcoT38I	GRGCYC	5 cut(s)	8, 348, 480, 812, 1500
ErhI	CCWWGG	3 cut(s)	1024, 1605, 1701
FaeI	CATG	9 cut(s)	94, 742, 767, 905, 982, 1309, 1524, 1622, 1783
FaqI	GGGAC	3 cut(s)	83, 1384, 1497
FatI	CATG	9 cut(s)	90, 738, 763, 901, 978, 1305, 1520, 1618, 1779
FauI	CCCGC	1 cut(s)	1487
FbaI	TGATCA	1 cut(s)	1750
FblI	GTMKAC	2 cut(s)	291, 1643
Fnu4HI	GCNGC	7 cut(s)	51, 267, 582, 625, 639, 1182, 1326
FokI	GGATG	4 cut(s)	401, 884, 992, 1787
FriOI	GRGCYC	5 cut(s)	8, 348, 480, 812, 1500
Fsp4HI	GCNGC	7 cut(s)	51, 267, 582, 625, 639, 1182, 1326
FspBI	CTAG	2 cut(s)	1185, 1662
GlaI	GCGC	4 cut(s)	393, 447, 648, 1165
GluI	GCNGC	7 cut(s)	51, 267, 582, 625, 639, 1182, 1326
GsuI	CTGGAG	2 cut(s)	150, 332
HaeII	RGCGCY	2 cut(s)	650, 1167
HaeIII	GGCC	6 cut(s)	437, 638, 768, 1196, 1498, 1628
HapII	CCGG	8 cut(s)	54, 386, 484, 897, 1362, 1374, 1525, 1623
HhaI	GCGC	4 cut(s)	394, 448, 649, 1166
Hin1II	CATG	9 cut(s)	94, 742, 767, 905, 982, 1309, 1524, 1622, 1783
Hin6I	GCGC	4 cut(s)	392, 446, 647, 1164
HinP1I	GCGC	4 cut(s)	392, 446, 647, 1164
HincII	GTYRAC	1 cut(s)	1390
HindII	GTYRAC	1 cut(s)	1390
HpaII	CCGG	8 cut(s)	54, 386, 484, 897, 1362, 1374, 1525, 1623
HphI	GGTGA	3 cut(s)	196, 499, 1706
Hpy166II	GTNNAC	5 cut(s)	292, 712, 761, 1390, 1644
Hpy188III	TCNNGA	6 cut(s)	167, 349, 416, 677, 818, 1235
Hpy8I	GTNNAC	5 cut(s)	292, 712, 761, 1390, 1644
Hpy99I	CGWCG	5 cut(s)	134, 365, 443, 446, 869
HpyAV	CCTTC	8 cut(s)	184, 235, 444, 944, 1136, 1246, 1360, 1510
HpyCH4III	ACNGT	7 cut(s)	85, 573, 1082, 1333, 1394, 1746, 1846
HpyCH4IV	ACGT	2 cut(s)	528, 714
HpyCH4V	TGCA	5 cut(s)	634, 830, 982, 1685, 1735
HpyF10VI	GCNNNNNNNGC	3 cut(s)	160, 443, 644
HpyF3I	CTNAG	5 cut(s)	650, 1133, 1190, 1229, 1851
HpySE526I	ACGT	2 cut(s)	528, 714
Hsp92II	CATG	9 cut(s)	94, 742, 767, 905, 982, 1309, 1524, 1622, 1783
HspAI	GCGC	4 cut(s)	392, 446, 647, 1164
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	1 cut(s)	1750
KspI	CCGCGG	1 cut(s)	625
Kzo9I	GATC	5 cut(s)	493, 655, 721, 1574, 1750
LmnI	GCTCC	2 cut(s)	351, 975
LweI	GCATC	3 cut(s)	379, 792, 862
MaeI	CTAG	2 cut(s)	1185, 1662
MaeII	ACGT	2 cut(s)	528, 714
MaeIII	GTNAC	5 cut(s)	487, 524, 1403, 1534, 1886
MalI	GATC	5 cut(s)	495, 657, 723, 1576, 1752
MboI	GATC	5 cut(s)	493, 655, 721, 1574, 1750
MboII	GAAGA	2 cut(s)	718, 785
MfeI	CAATTG	2 cut(s)	399, 825
MhlI	GDGCHC	7 cut(s)	8, 348, 408, 480, 812, 937, 1500
MlsI	TGGCCA	1 cut(s)	768
MluCI	AATT	8 cut(s)	18, 208, 216, 309, 399, 825, 958, 1759
MluNI	TGGCCA	1 cut(s)	768
MlyI	GAGTC	4 cut(s)	551, 627, 811, 1011
MmeI	TCCRAC	3 cut(s)	255, 300, 1364
Mox20I	TGGCCA	1 cut(s)	768
Mph1103I	ATGCAT	1 cut(s)	984
MroNI	GCCGGC	1 cut(s)	53
MscI	TGGCCA	1 cut(s)	768
MseI	TTAA	4 cut(s)	219, 921, 1125, 1173
Msp20I	TGGCCA	1 cut(s)	768
MspA1I	CMGCKG	1 cut(s)	624
MspCI	CTTAAG	1 cut(s)	1172
MspI	CCGG	8 cut(s)	54, 386, 484, 897, 1362, 1374, 1525, 1623
MspR9I	CCNGG	9 cut(s)	281, 386, 485, 603, 705, 1298, 1363, 1375, 1624
MssI	GTTTAAAC	1 cut(s)	1126
MunI	CAATTG	2 cut(s)	399, 825
Mva1269I	GAATGC	1 cut(s)	552
MvaI	CCWGG	4 cut(s)	281, 603, 705, 1298
MvnI	CGCG	5 cut(s)	394, 446, 448, 624, 678
MwoI	GCNNNNNNNGC	3 cut(s)	160, 443, 644
NaeI	GCCGGC	1 cut(s)	55
NciI	CCSGG	5 cut(s)	386, 485, 1363, 1375, 1624
NdeII	GATC	5 cut(s)	493, 655, 721, 1574, 1750
NgoMIV	GCCGGC	1 cut(s)	53
NheI	GCTAGC	1 cut(s)	1184
NlaIII	CATG	9 cut(s)	94, 742, 767, 905, 982, 1309, 1524, 1622, 1783
NlaIV	GGNNCC	7 cut(s)	347, 384, 599, 1302, 1372, 1498, 1627
NmuCI	GTSAC	3 cut(s)	487, 524, 1534
NruI	TCGCGA	1 cut(s)	678
NsiI	ATGCAT	1 cut(s)	984
NspI	RCATGY	3 cut(s)	982, 1524, 1622
PaeI	GCATGC	1 cut(s)	982
PaqCI	CACCTGC	1 cut(s)	159
PcsI	WCGNNNNNNNCGW	4 cut(s)	126, 138, 363, 369
PctI	GAATGC	1 cut(s)	552
PdiI	GCCGGC	1 cut(s)	55
PfeI	GAWTC	9 cut(s)	44, 257, 562, 687, 700, 814, 1014, 1289, 1528
PfoI	TCCNGGA	1 cut(s)	1361
PinAI	ACCGGT	1 cut(s)	896
PkrI	GCNGC	7 cut(s)	52, 268, 583, 626, 640, 1183, 1327
PleI	GAGTC	4 cut(s)	551, 626, 810, 1010
PmeI	GTTTAAAC	1 cut(s)	1126
PpsI	GAGTC	4 cut(s)	551, 626, 810, 1010
PpuMI	RGGWCCY	2 cut(s)	1300, 1602
PsiI	TTATAA	1 cut(s)	1119
Psp124BI	GAGCTC	2 cut(s)	480, 812
Psp5II	RGGWCCY	2 cut(s)	1300, 1602
Psp6I	CCWGG	4 cut(s)	279, 601, 703, 1296
PspEI	GGTNACC	1 cut(s)	487
PspGI	CCWGG	4 cut(s)	279, 601, 703, 1296
PspN4I	GGNNCC	7 cut(s)	347, 384, 599, 1302, 1372, 1498, 1627
PspOMI	GGGCCC	1 cut(s)	1496
PspPPI	RGGWCCY	2 cut(s)	1300, 1602
PstNI	CAGNNNCTG	1 cut(s)	946
RruI	TCGCGA	1 cut(s)	678
RsaI	GTAC	3 cut(s)	518, 713, 1743
RsaNI	GTAC	3 cut(s)	517, 712, 1742
SacI	GAGCTC	2 cut(s)	480, 812
SacII	CCGCGG	1 cut(s)	625
SaqAI	TTAA	4 cut(s)	219, 921, 1125, 1173
SatI	GCNGC	7 cut(s)	51, 267, 582, 625, 639, 1182, 1326
Sau3AI	GATC	5 cut(s)	493, 655, 721, 1574, 1750
SchI	GAGTC	4 cut(s)	551, 627, 811, 1011
ScrFI	CCNGG	9 cut(s)	281, 386, 485, 603, 705, 1298, 1363, 1375, 1624
SduI	GDGCHC	7 cut(s)	8, 348, 408, 480, 812, 937, 1500
SfaNI	GCATC	3 cut(s)	379, 792, 862
Sfr303I	CCGCGG	1 cut(s)	625
SgrBI	CCGCGG	1 cut(s)	625
SinI	GGWCC	7 cut(s)	382, 468, 508, 1300, 1371, 1602, 1609
SmlI	CTYRAG	2 cut(s)	414, 1172
SmoI	CTYRAG	2 cut(s)	414, 1172
SphI	GCATGC	1 cut(s)	982
Sse9I	AATT	8 cut(s)	18, 208, 216, 309, 399, 825, 958, 1759
SspI	AATATT	2 cut(s)	1074, 1680
SspMI	CTAG	2 cut(s)	1185, 1662
SstI	GAGCTC	2 cut(s)	480, 812
StyD4I	CCNGG	9 cut(s)	279, 384, 483, 601, 703, 1296, 1361, 1373, 1622
StyI	CCWWGG	3 cut(s)	1024, 1605, 1701
TaaI	ACNGT	7 cut(s)	85, 573, 1082, 1333, 1394, 1746, 1846
TaiI	ACGT	2 cut(s)	531, 717
TaqII	GACCGA	1 cut(s)	506
TasI	AATT	8 cut(s)	18, 208, 216, 309, 399, 825, 958, 1759
TatI	WGTACW	1 cut(s)	1741
TauI	GCSGC	7 cut(s)	53, 269, 584, 627, 641, 1184, 1328
TfiI	GAWTC	9 cut(s)	44, 257, 562, 687, 700, 814, 1014, 1289, 1528
Tru1I	TTAA	4 cut(s)	219, 921, 1125, 1173
Tru9I	TTAA	4 cut(s)	219, 921, 1125, 1173
TscAI	CASTG	1 cut(s)	582
TseFI	GTSAC	3 cut(s)	487, 524, 1534
Tsp45I	GTSAC	3 cut(s)	487, 524, 1534
TspDTI	ATGAA	6 cut(s)	107, 166, 1329, 1343, 1703, 1875
TspGWI	ACGGA	1 cut(s)	512
TspRI	CASTG	1 cut(s)	582
Vha464I	CTTAAG	1 cut(s)	1172
VpaK11BI	GGWCC	7 cut(s)	382, 468, 508, 1300, 1371, 1602, 1609
XapI	RAATTY	2 cut(s)	309, 958
XceI	RCATGY	3 cut(s)	982, 1524, 1622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	776
XmiI	GTMKAC	2 cut(s)	291, 1643
XspI	CTAG	2 cut(s)	1185, 1662
Zsp2I	ATGCAT	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.