Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0009622

Physical Location & Seq

Genomic Coordinates Reverse (-)

10543105 .. 10545124

Gene Structure 2020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G005180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGGGCTCTCTCCTCCCAATTCTTGACCTCAATGCCTCCCCTCAATCCGTCCCCAATTCAACCCTAGCCACCGCCACCATATCCCTCAAGGTCCCCAAAATCGAGCCCAAGCCCGAGCCTTGCGACGACCCAGCTCCCCAACCCCCCTTCGATCCCAGCCCCAGCTCCGACATTTTCCCCAATCCCCAAACTGCCCCTCTCCCTCTCCCCCACCAGACCTCGATCGACGGCGTCGTTCTGGACCCGGAGTCCGGCGCGATTGTTCCCGTGGAGGACAACAACCAGCAGCAGCAGCTGGCGGAGGTCGTGCAGCGGAAGAAGTACCCGCAGCGGTCGAACGAGCTCGTCCGGGTCACCGATCTCAGCGACGAGGACCACCGCTACTTCCGTGAGGTCGTCAGGAAGACCCGGATGCTCTACGATTCGATTCGGATCCTCTCGGTGGCGGAGGAGGACAAGAAGAATCCGGGTCAGGGGAAACGGACCCGGGGCGACCTGCGGGCCGCCTCCGTGCTCCGGGACCGTGGGCTCTGGCTCAACCTCTATGTTGGTGACCTCTTCTTCTTTCGCATGGAGCTATGTGTGGTTGGGATACACGGACAAGTCCAAGCTGGAATTGACTATCTTCCGGGGAGCCAGAGCTCGAATAGGGAGCCGATTGCGACGAGCATTATCGTCTCTGGCGGGTACGAGGATGATGAGGATGCTGGGGATATTATTATCTACACAGGACATGGAGGGCAGGACAAGTTTAATAGGCAATGTGCGCACCAGAAGCTGGAGGGTGGGAACTTGGCGTTGGAGAGGAGTATGCATTACGGGATTGAAGTGAGGGTTATTAGGGGGAGGAAGATTCATGGAGCTGTTTCGAGTAAGGTGTATGTTTATGATGGTTTGTATAGGATTCTTGAAACTTGGCTTGATGTTGGGAAGTCGGGGTTTGGTGTTTATAAGTTTAAGCTTTTGAGAATCGAGGGGCAGCCTGAGATGGGGAGCTCCATTCTTAAGTTTGCTGAGAGTCTTAGGAGTAGGCCGTTGAGTGTGAGGCCGAGGGGTTATCTTAGTTTGGATCTTTCGCAGCAGAGGGAGAAGATTCCGGTGTTGCTTTTCAATGACATTGATGCTGATCAGGACCCCTTGTATTATGAGTATCTTAGGACACCTGCATTTCCAACTCATGTGTATCATCAGTCGGCAAATGGAACTGGCTGTGAATGTGTTAACGGTTGTAATGAAAATTGCTTTTGTGCTATGAAAAATGGAGGGGAGTTTCCTTATGATCAGAATGGGTTTCTTCTGAGGGGGAAGCCTGTGGTATTTGAGTGTGGGACCTTCTGCCGTTGCCCCCCGCAGTGTCGGAATCGTGTCACCCAACATGGATTGAGAAATAGACTGGAAGTGTTTAGATCAAGGGAAACAGGTTGGGGGGTTAGGTCTTTGGACTTGATACATGCTGGCGCTTTTATATGTGAGTATACAGGAGTTATTCTCACGAGGGAGCAGGCTCAAATTTTTTCCATGGATGGTGATAGCTTGATCTATCCCCATCGGTTTTCTGATAAATGGGCAGAATGGGGAGATTTATCTCAGATCTATCCTGATTATGCGCGTCCAACTTATCCGGCAATCCCACCGCTGGATTTTGCAATGGATGTGTCAAAAATGAGGAATGTTGCTTGTTATATGAGCCAGAGTACCACTCCAAATGTGATGGTGCAGTTCGTTCTATTTGATCACAACAACTTGATGTTTCCTCATCTTATGCTATTTGCAATGGAGAACATTCCTCCTCTGAGGGAGTTAAGCCTTGACTATGGGGTGGCGGTGGCTGATGAATGGACAGGGAAACTTGCTATCTGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0046483 GO:0048519 GO:0050789 GO:0051276 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080188 GO:0090304 GO:0098687 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

621

Amino Acids

69.84

Weight (kDa)

5.77

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	181 - 327	9e-49	SAD/SRA domain
Pre-SET	PF05033	359 - 455	2.1e-20	Pre-SET motif
SET	PF00856	474 - 606	3.6e-11	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13460 AT4G13460
fragaria_vesca	FvH4_2g20121
malus_domestica	MD13G1224000.v1.1 MD16G1228800.v1.1
prunus_persica	Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1
pyrus_communis	pycom13g19790
rosa_chinensis	RchiOBHm_Chr4g0395951
rosa_laevigata	RLG00000009586
rosa_multiflora	Rmu_sc0001103.1_g000009
rosa_roxburghii	Rroxscaffold_5G00340700
rosa_rugosa	Rorug03G0353200 Rorug03G0353300
rosa_samantha	Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100
rosa_wichuraiana	Rw4G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	951
AarI	CACCTGC	1 cut(s)	1171
Acc16I	TGCGCA	1 cut(s)	768
Acc36I	ACCTGC	2 cut(s)	504, 1171
AccB7I	CCANNNNNTGG	1 cut(s)	778
AccI	GTMKAC	1 cut(s)	1475
AccII	CGCG	2 cut(s)	257, 1609
AclWI	GGATC	4 cut(s)	146, 427, 440, 1077
AcsI	RAATTY	1 cut(s)	1509
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	3 cut(s)	323, 689, 1696
AfiI	CCNNNNNNNGG	7 cut(s)	251, 442, 473, 516, 778, 989, 1636
AflII	CTTAAG	1 cut(s)	1004
AgsI	TTSAA	4 cut(s)	60, 827, 911, 1111
AhdI	GACNNNNNGTC	1 cut(s)	247
AjuI	GAANNNNNNNTTGG	2 cut(s)	782, 814
Alw21I	GWGCWC	4 cut(s)	345, 516, 644, 998
Alw26I	GTCTC	1 cut(s)	682
AlwI	GGATC	4 cut(s)	146, 427, 440, 1077
AlwNI	CAGNNNCTG	2 cut(s)	295, 778
Ama87I	CYCGRG	2 cut(s)	113, 486
AoxI	GGCC	3 cut(s)	501, 1031, 1046
ApeKI	GCWGC	7 cut(s)	286, 289, 292, 310, 328, 979, 1078
ApoI	RAATTY	1 cut(s)	1509
AspLEI	GCGC	4 cut(s)	257, 769, 1460, 1609
AspS9I	GGNCC	8 cut(s)	91, 241, 373, 483, 501, 520, 1132, 1329
AsuC2I	CCSGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
AsuHPI	GGTGA	4 cut(s)	346, 563, 1360, 1538
AvaI	CYCGRG	2 cut(s)	113, 486
AvaII	GGWCC	7 cut(s)	91, 241, 373, 483, 520, 1132, 1329
BamHI	GGATCC	1 cut(s)	432
BanII	GRGCYC	6 cut(s)	8, 108, 345, 531, 644, 998
BauI	CACGAG	1 cut(s)	1492
BbsI	GAAGAC	1 cut(s)	410
Bbv12I	GWGCWC	4 cut(s)	345, 516, 644, 998
BbvI	GCAGC	7 cut(s)	298, 301, 304, 322, 340, 991, 1090
BccI	CCATC	5 cut(s)	884, 982, 1517, 1554, 1705
BceAI	ACGGC	3 cut(s)	244, 1018, 1323
BciVI	GTATCC	1 cut(s)	585
BclI	TGATCA	3 cut(s)	1126, 1279, 1732
BcnI	CCSGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
BcoDI	GTCTC	1 cut(s)	682
BfaI	CTAG	1 cut(s)	65
BfoI	RGCGCY	1 cut(s)	1461
BfrI	CTTAAG	1 cut(s)	1004
BfuAI	ACCTGC	2 cut(s)	504, 1171
BfuI	GTATCC	1 cut(s)	585
BglII	AGATCT	1 cut(s)	1590
BisI	GCNGC	8 cut(s)	287, 290, 293, 311, 329, 504, 980, 1079
BlsI	GCNGC	8 cut(s)	288, 291, 294, 312, 330, 505, 981, 1080
Bme1390I	CCNGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
Bme18I	GGWCC	7 cut(s)	91, 241, 373, 483, 520, 1132, 1329
BmeRI	GACNNNNNGTC	1 cut(s)	247
BmeT110I	CYCGRG	2 cut(s)	113, 486
BmgT120I	GGNCC	8 cut(s)	91, 241, 373, 483, 501, 520, 1132, 1329
BmiI	GGNNCC	9 cut(s)	93, 243, 434, 485, 521, 635, 654, 1134, 1330
BmrFI	CCNGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
BmsI	GCATC	3 cut(s)	402, 694, 1111
BpiI	GAAGAC	1 cut(s)	410
BplI	GAGNNNNNCTC	4 cut(s)	1473, 1505, 1684, 1716
BpmI	CTGGAG	1 cut(s)	800
BpuEI	CTTGAG	1 cut(s)	71
BpuMI	CCSGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
BsaBI	GATNNNNATC	2 cut(s)	431, 1125
BsaHI	GRCGYC	1 cut(s)	231
BsaJI	CCNNGG	7 cut(s)	267, 486, 487, 523, 629, 1049, 1518
BsaWI	WCCGGW	1 cut(s)	1096
Bsc4I	CCNNNNNNNGG	7 cut(s)	251, 442, 473, 516, 778, 989, 1636
Bse1I	ACTGG	2 cut(s)	1210, 1398
Bse3DI	GCAATG	3 cut(s)	767, 1653, 1779
Bse8I	GATNNNNATC	2 cut(s)	431, 1125
BseDI	CCNNGG	7 cut(s)	267, 486, 487, 523, 629, 1049, 1518
BseGI	GGATG	5 cut(s)	417, 700, 709, 1528, 1657
BseJI	GATNNNNATC	2 cut(s)	431, 1125
BseLI	CCNNNNNNNGG	7 cut(s)	251, 442, 473, 516, 778, 989, 1636
BseMI	GCAATG	3 cut(s)	767, 1653, 1779
BseMII	CTCAG	6 cut(s)	376, 975, 1005, 1289, 1601, 1784
BseNI	ACTGG	2 cut(s)	1210, 1398
BseRI	GAGGAG	3 cut(s)	464, 820, 1779
BseXI	GCAGC	7 cut(s)	298, 301, 304, 322, 340, 991, 1090
BseYI	CCCAGC	4 cut(s)	130, 155, 161, 707
BsgI	GTGCAG	2 cut(s)	329, 1736
Bsh1236I	CGCG	2 cut(s)	257, 1609
Bsh1285I	CGRYCG	2 cut(s)	225, 335
BshFI	GGCC	3 cut(s)	503, 1033, 1048
BsiEI	CGRYCG	2 cut(s)	225, 335
BsiHKAI	GWGCWC	4 cut(s)	345, 516, 644, 998
BsiHKCI	CYCGRG	2 cut(s)	113, 486
BslFI	GGGAC	4 cut(s)	35, 77, 533, 1342
BslI	CCNNNNNNNGG	7 cut(s)	251, 442, 473, 516, 778, 989, 1636
BsmAI	GTCTC	1 cut(s)	682
BsmBI	CGTCTC	1 cut(s)	682
BsmFI	GGGAC	4 cut(s)	35, 77, 533, 1342
BsnI	GGCC	3 cut(s)	503, 1033, 1048
BsoBI	CYCGRG	2 cut(s)	113, 486
Bsp1286I	GDGCHC	7 cut(s)	8, 108, 345, 516, 531, 644, 998
Bsp19I	CCATGG	1 cut(s)	1518
BspANI	GGCC	3 cut(s)	503, 1033, 1048
BspCNI	CTCAG	6 cut(s)	375, 976, 1006, 1290, 1600, 1785
BspFNI	CGCG	2 cut(s)	257, 1609
BspLI	GGNNCC	9 cut(s)	93, 243, 434, 485, 521, 635, 654, 1134, 1330
BspMI	ACCTGC	2 cut(s)	504, 1171
BspPI	GGATC	4 cut(s)	146, 427, 440, 1077
BspTI	CTTAAG	1 cut(s)	1004
BsrDI	GCAATG	3 cut(s)	767, 1653, 1779
BsrI	ACTGG	2 cut(s)	1210, 1398
BssECI	CCNNGG	7 cut(s)	267, 486, 487, 523, 629, 1049, 1518
BssNAI	GTATAC	1 cut(s)	1476
BssNI	GRCGYC	1 cut(s)	231
BssSI	CACGAG	1 cut(s)	1492
BssT1I	CCWWGG	1 cut(s)	1518
Bst1107I	GTATAC	1 cut(s)	1476
Bst2BI	CACGAG	1 cut(s)	1492
Bst4CI	ACNGT	2 cut(s)	524, 1226
Bst6I	CTCTTC	1 cut(s)	563
BstACI	GRCGYC	1 cut(s)	231
BstAFI	CTTAAG	1 cut(s)	1004
BstC8I	GCNNGC	4 cut(s)	297, 501, 1456, 1503
BstDEI	CTNAG	9 cut(s)	362, 984, 1014, 1022, 1061, 1154, 1298, 1587, 1793
BstDSI	CCRYGG	3 cut(s)	267, 523, 1518
BstEII	GGTNACC	2 cut(s)	352, 551
BstF5I	GGATG	5 cut(s)	417, 700, 709, 1528, 1657
BstFNI	CGCG	2 cut(s)	257, 1609
BstH2I	RGCGCY	1 cut(s)	1461
BstHHI	GCGC	4 cut(s)	257, 769, 1460, 1609
BstMAI	GTCTC	1 cut(s)	682
BstMCI	CGRYCG	2 cut(s)	225, 335
BstMWI	GCNNNNNNNGC	3 cut(s)	292, 766, 775
BstNSI	RCATGY	1 cut(s)	1454
BstPI	GGTNACC	2 cut(s)	352, 551
BstSCI	CCNGG	8 cut(s)	243, 348, 407, 466, 485, 486, 516, 628
BstUI	CGCG	2 cut(s)	257, 1609
BstV1I	GCAGC	7 cut(s)	298, 301, 304, 322, 340, 991, 1090
BstV2I	GAAGAC	1 cut(s)	410
BstX2I	RGATCY	3 cut(s)	432, 1069, 1590
BstYI	RGATCY	3 cut(s)	432, 1069, 1590
BstZ17I	GTATAC	1 cut(s)	1476
BsuI	GTATCC	1 cut(s)	585
BsuRI	GGCC	3 cut(s)	503, 1033, 1048
BtgI	CCRYGG	3 cut(s)	267, 523, 1518
BtsCI	GGATG	5 cut(s)	417, 700, 709, 1528, 1657
BtsI	GCAGTG	1 cut(s)	1358
BtsIMutI	CAGTG	1 cut(s)	1358
BveI	ACCTGC	2 cut(s)	504, 1171
Cac8I	GCNNGC	4 cut(s)	297, 501, 1456, 1503
CaiI	CAGNNNCTG	2 cut(s)	295, 778
CfoI	GCGC	4 cut(s)	257, 769, 1460, 1609
Cfr13I	GGNCC	8 cut(s)	91, 241, 373, 483, 501, 520, 1132, 1329
Cfr9I	CCCGGG	1 cut(s)	486
CseI	GACGC	2 cut(s)	220, 1598
Csp6I	GTAC	3 cut(s)	322, 688, 1695
CviAII	CATG	7 cut(s)	571, 734, 857, 1178, 1376, 1451, 1519
CviQI	GTAC	3 cut(s)	322, 688, 1695
DdeI	CTNAG	9 cut(s)	362, 984, 1014, 1022, 1061, 1154, 1298, 1587, 1793
DriI	GACNNNNNGTC	1 cut(s)	247
Eam1104I	CTCTTC	1 cut(s)	563
Eam1105I	GACNNNNNGTC	1 cut(s)	247
EarI	CTCTTC	1 cut(s)	563
EciI	GGCGGA	2 cut(s)	314, 461
Ecl136II	GAGCTC	3 cut(s)	343, 642, 996
Eco130I	CCWWGG	1 cut(s)	1518
Eco24I	GRGCYC	6 cut(s)	8, 108, 345, 531, 644, 998
Eco47I	GGWCC	7 cut(s)	91, 241, 373, 483, 520, 1132, 1329
Eco53kI	GAGCTC	3 cut(s)	343, 642, 996
Eco88I	CYCGRG	2 cut(s)	113, 486
Eco91I	GGTNACC	2 cut(s)	352, 551
EcoICRI	GAGCTC	3 cut(s)	343, 642, 996
EcoO109I	RGGNCCY	3 cut(s)	91, 1132, 1329
EcoO65I	GGTNACC	2 cut(s)	352, 551
EcoT14I	CCWWGG	1 cut(s)	1518
EcoT22I	ATGCAT	1 cut(s)	816
EcoT38I	GRGCYC	6 cut(s)	8, 108, 345, 531, 644, 998
ErhI	CCWWGG	1 cut(s)	1518
Esp3I	CGTCTC	1 cut(s)	682
FaeI	CATG	7 cut(s)	574, 737, 860, 1181, 1379, 1454, 1522
FaqI	GGGAC	4 cut(s)	35, 77, 533, 1342
FatI	CATG	7 cut(s)	570, 733, 856, 1177, 1375, 1450, 1518
FauI	CCCGC	4 cut(s)	333, 492, 677, 1356
FbaI	TGATCA	3 cut(s)	1126, 1279, 1732
FblI	GTMKAC	1 cut(s)	1475
Fnu4HI	GCNGC	8 cut(s)	287, 290, 293, 311, 329, 504, 980, 1079
FokI	GGATG	5 cut(s)	424, 707, 716, 1535, 1664
FriOI	GRGCYC	6 cut(s)	8, 108, 345, 531, 644, 998
Fsp4HI	GCNGC	8 cut(s)	287, 290, 293, 311, 329, 504, 980, 1079
FspAI	RTGCGCAY	1 cut(s)	768
FspBI	CTAG	1 cut(s)	65
FspI	TGCGCA	1 cut(s)	768
GlaI	GCGC	4 cut(s)	256, 768, 1459, 1608
GluI	GCNGC	8 cut(s)	287, 290, 293, 311, 329, 504, 980, 1079
GsaI	CCCAGC	4 cut(s)	134, 159, 165, 711
GsuI	CTGGAG	1 cut(s)	800
HaeII	RGCGCY	1 cut(s)	1461
HaeIII	GGCC	3 cut(s)	503, 1033, 1048
HgaI	GACGC	2 cut(s)	220, 1598
HhaI	GCGC	4 cut(s)	257, 769, 1460, 1609
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	7 cut(s)	574, 737, 860, 1181, 1379, 1454, 1522
Hin6I	GCGC	4 cut(s)	255, 767, 1458, 1607
HinP1I	GCGC	4 cut(s)	255, 767, 1458, 1607
HincII	GTYRAC	1 cut(s)	1222
HindII	GTYRAC	1 cut(s)	1222
HindIII	AAGCTT	1 cut(s)	959
HpaI	GTTAAC	1 cut(s)	1222
HphI	GGTGA	4 cut(s)	346, 563, 1360, 1538
Hpy166II	GTNNAC	2 cut(s)	1222, 1476
Hpy188I	TCNGA	8 cut(s)	169, 432, 1284, 1299, 1359, 1558, 1590, 1794
Hpy188III	TCNNGA	7 cut(s)	23, 239, 400, 908, 1130, 1492, 1598
Hpy8I	GTNNAC	2 cut(s)	1222, 1476
Hpy99I	CGWCG	5 cut(s)	128, 230, 236, 371, 667
HpyAV	CCTTC	2 cut(s)	157, 1342
HpyCH4III	ACNGT	2 cut(s)	524, 1226
HpyCH4V	TGCA	6 cut(s)	310, 814, 1166, 1646, 1717, 1772
HpyF10VI	GCNNNNNNNGC	3 cut(s)	292, 766, 775
HpyF3I	CTNAG	9 cut(s)	362, 984, 1014, 1022, 1061, 1154, 1298, 1587, 1793
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	7 cut(s)	574, 737, 860, 1181, 1379, 1454, 1522
HspAI	GCGC	4 cut(s)	255, 767, 1458, 1607
Ksp22I	TGATCA	3 cut(s)	1126, 1279, 1732
KspAI	GTTAAC	1 cut(s)	1222
Lsp1109I	GCAGC	7 cut(s)	298, 301, 304, 322, 340, 991, 1090
LweI	GCATC	3 cut(s)	402, 694, 1111
MaeI	CTAG	1 cut(s)	65
MaeIII	GTNAC	4 cut(s)	352, 551, 1366, 1859
MboII	GAAGA	9 cut(s)	328, 415, 472, 550, 553, 617, 862, 1102, 1286
MflI	RGATCY	3 cut(s)	432, 1069, 1590
MhlI	GDGCHC	7 cut(s)	8, 108, 345, 516, 531, 644, 998
MluCI	AATT	5 cut(s)	18, 55, 615, 1237, 1509
MlyI	GAGTC	2 cut(s)	257, 1027
MmeI	TCCRAC	5 cut(s)	192, 780, 1196, 1337, 1637
Mph1103I	ATGCAT	1 cut(s)	816
MseI	TTAA	5 cut(s)	753, 957, 1005, 1221, 1802
MspA1I	CMGCKG	4 cut(s)	295, 313, 331, 1636
MspCI	CTTAAG	1 cut(s)	1004
MspR9I	CCNGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
MvnI	CGCG	2 cut(s)	257, 1609
MwoI	GCNNNNNNNGC	3 cut(s)	292, 766, 775
NciI	CCSGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
NcoI	CCATGG	1 cut(s)	1518
NlaIII	CATG	7 cut(s)	574, 737, 860, 1181, 1379, 1454, 1522
NlaIV	GGNNCC	9 cut(s)	93, 243, 434, 485, 521, 635, 654, 1134, 1330
NmeAIII	GCCGAG	1 cut(s)	1074
NmuCI	GTSAC	3 cut(s)	352, 551, 1366
NsbI	TGCGCA	1 cut(s)	768
NsiI	ATGCAT	1 cut(s)	816
NspI	RCATGY	1 cut(s)	1454
PaqCI	CACCTGC	1 cut(s)	1171
PcsI	WCGNNNNNNNCGW	1 cut(s)	231
PfeI	GAWTC	8 cut(s)	422, 427, 463, 853, 904, 969, 1093, 1360
PflFI	GACNNNGTC	1 cut(s)	230
PflMI	CCANNNNNTGG	1 cut(s)	778
PfoI	TCCNGGA	1 cut(s)	516
PkrI	GCNGC	8 cut(s)	288, 291, 294, 312, 330, 505, 981, 1080
Ple19I	CGATCG	1 cut(s)	225
PleI	GAGTC	2 cut(s)	256, 1026
PpsI	GAGTC	2 cut(s)	256, 1026
PpuMI	RGGWCCY	3 cut(s)	91, 1132, 1329
PsiI	TTATAA	1 cut(s)	951
Psp124BI	GAGCTC	3 cut(s)	345, 644, 998
Psp5II	RGGWCCY	3 cut(s)	91, 1132, 1329
PspEI	GGTNACC	2 cut(s)	352, 551
PspFI	CCCAGC	4 cut(s)	130, 155, 161, 707
PspN4I	GGNNCC	9 cut(s)	93, 243, 434, 485, 521, 635, 654, 1134, 1330
PspPI	GGNCC	8 cut(s)	91, 241, 373, 483, 501, 520, 1132, 1329
PspPPI	RGGWCCY	3 cut(s)	91, 1132, 1329
PstNI	CAGNNNCTG	2 cut(s)	295, 778
PsuI	RGATCY	3 cut(s)	432, 1069, 1590
PsyI	GACNNNGTC	1 cut(s)	230
PvuI	CGATCG	1 cut(s)	225
PvuII	CAGCTG	1 cut(s)	295
RsaI	GTAC	3 cut(s)	323, 689, 1696
RsaNI	GTAC	3 cut(s)	322, 688, 1695
SacI	GAGCTC	3 cut(s)	345, 644, 998
SaqAI	TTAA	5 cut(s)	753, 957, 1005, 1221, 1802
SatI	GCNGC	8 cut(s)	287, 290, 293, 311, 329, 504, 980, 1079
Sau96I	GGNCC	8 cut(s)	91, 241, 373, 483, 501, 520, 1132, 1329
SchI	GAGTC	2 cut(s)	257, 1027
ScrFI	CCNGG	8 cut(s)	245, 350, 409, 468, 487, 488, 518, 630
SduI	GDGCHC	7 cut(s)	8, 108, 345, 516, 531, 644, 998
SfaNI	GCATC	3 cut(s)	402, 694, 1111
SinI	GGWCC	7 cut(s)	91, 241, 373, 483, 520, 1132, 1329
SmaI	CCCGGG	1 cut(s)	488
SmlI	CTYRAG	2 cut(s)	86, 1004
SmoI	CTYRAG	2 cut(s)	86, 1004
Sse9I	AATT	5 cut(s)	18, 55, 615, 1237, 1509
SspMI	CTAG	1 cut(s)	65
SstI	GAGCTC	3 cut(s)	345, 644, 998
StyD4I	CCNGG	8 cut(s)	243, 348, 407, 466, 485, 486, 516, 628
StyI	CCWWGG	1 cut(s)	1518
TaaI	ACNGT	2 cut(s)	524, 1226
TaqI	TCGA	9 cut(s)	102, 150, 221, 225, 335, 425, 644, 869, 972
TasI	AATT	5 cut(s)	18, 55, 615, 1237, 1509
TauI	GCSGC	1 cut(s)	506
TfiI	GAWTC	8 cut(s)	422, 427, 463, 853, 904, 969, 1093, 1360
Tru1I	TTAA	5 cut(s)	753, 957, 1005, 1221, 1802
Tru9I	TTAA	5 cut(s)	753, 957, 1005, 1221, 1802
TscAI	CASTG	1 cut(s)	1358
TseFI	GTSAC	3 cut(s)	352, 551, 1366
TseI	GCWGC	7 cut(s)	286, 289, 292, 310, 328, 979, 1078
Tsp45I	GTSAC	3 cut(s)	352, 551, 1366
TspDTI	ATGAA	4 cut(s)	845, 1248, 1268, 1848
TspGWI	ACGGA	5 cut(s)	37, 377, 496, 499, 612
TspMI	CCCGGG	1 cut(s)	486
TspRI	CASTG	1 cut(s)	1358
Tth111I	GACNNNGTC	1 cut(s)	230
Van91I	CCANNNNNTGG	1 cut(s)	778
Vha464I	CTTAAG	1 cut(s)	1004
VpaK11BI	GGWCC	7 cut(s)	91, 241, 373, 483, 520, 1132, 1329
XapI	RAATTY	1 cut(s)	1509
XceI	RCATGY	1 cut(s)	1454
XmaI	CCCGGG	1 cut(s)	486
XmiI	GTMKAC	1 cut(s)	1475
XspI	CTAG	1 cut(s)	65
Zsp2I	ATGCAT	1 cut(s)	816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.