Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0009622

Physical Location & Seq

Genomic Coordinates Reverse (-)

9181324 .. 9183328

Gene Structure 2005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00340700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGGCTCTCTCCTCCCAATTCTTGACCTCAATGCCTCCCCTCAATCCGCCCCCAATTCAACCCTAGCCACCGCCACCATATCCCTCAAGACCTCGATCGTGGCCGCCGCGCCGGACCACGTCTACTCCGAGTTCCACCGCATTTCGGAGCTCTTCCACACCGCGTTCGCCAAAGGGATTCAGAACTGCGGCGGCGGCGGCGGTGGAGACGAGGACGGCGTCGTTCTGGACCCGGAGTCCGGCGCGATTGTTCCGGTGGAGGACAAAAACCAGCAGCAGCAGCTGGCGGAGGTGGTGCAGCGGAAGAAGTACCCGCAGCGGTCGAACGAGCTCGTCCGGGTCACCGATCTCAGCGACGAGGACCACCGCTACTTCCGTGAGGTCGTCAGGAAGACCCGGATGCTCTACGATTCGATTCGGATCATTTCGGTGGCGGAGGAGGACAAGAAGAATCCGGGTCAGGGGAAACGGACCCGGGGCGACTTGCGGGCCGCCTCGGTGCTCCGGGACCGTGGGCTCTGGCTCAACCGTGATAAGCGGATTGTGGGGTCCATTCCGGGAGTCTATGTTGGTGACCTCTTCTTCTTTCGCATGGAGCTATGTGTGGTTGGGATACATGGTCAAGTCCAAGCTGGAATTGACTATCTTCCGGGCAGCCAGAGCTCGAACAGGGAGCCGATTGCGACGAGCATTATCGTCTCCGGCGGGTACGAGGATGATGAGGATGCTGGGGATATTATTATCTACACAGGACATGGAGGGCAGGACAAGTTTAATAGGCAATGTGCACACCAGAAGCTGGAGGGTGGGAACTTGGCGTTGGAGAGGAGTATGCATTACGGGATTGAAGTGAGAGTTATTAGGGGGAGGAAGATTCATGGTGCTGTTTCGAGTAAGGTGTATGTCTATGATGGGTTGTATAGGATTCTTGAAACTTGGCTTGATGTTGGGAAGTCGGGGTTTGGTGTTTATAAGTTTAAGCTTTTGAGAATCGAGGGGCAGCCTGAGATGGGGAGCTCCATTCTTAAGTTTGCCGAGAGTCTTAGGAGTAGGCCGTTGAGTGTGAGGCCGAGGGGTTATCTTAGTTTGGATCTTTCGCAGCAGAGGGAGAAGATTCCGGTGTTGCTTTTCAATGACATTGATGCTGATCAGGACCCCTTGTATTATGAGTATCTTAGGACACCTGCATTTCCAACTCATGTGTATCATCAGTCGGCAAACGAATGGGTTTCTTTTGAGGGGAAGCCTGTGGTATTTGAGTGTGGGACCTTCTGCCGTTGCCCCCCGCAGTGTCGGAATCGTGTCACCCAACATGGATTGAGAAATAGACTGGAAGTGTTTAGATCAAGGGAAACAGGTTGGGGGGTTAGGTCTTTGGACTTGATACATGCCGGCGCTTTTATATGTGAGTATACTGGAGTTATTCTCACGAGGGAGCAGGCTCAAATTTTTTCCATGGATGGTGATAGCTTGATCTATCCCCATCGATTTTCTGATAAATGGGCAGAATGGGGAGATTTATCTCAGATCTATCCTGATTATGCGCGTCCAACTTATCCGCCAATCCCACCTCTGGATTTTGCAATGGATGTGTCAAAAATGAGGAATGTTGCTTGTTATATGAGCCAGAGTACCACTCCAAATGTGATGGTGCAGTTCGTTCTTTATGATCACAACAACTTGATGTTTCCTCATCTTATGCTATTTGCAATGGAGAACATTCCTCCTCTGAGGGAGTTAAGCCTTGACTATGGGGTGGCAGTGGCTGATGAATGGACAGGGAAACTTGCTATCTGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000775 GO:0000785 GO:0000790 GO:0000792 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005720 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0009292 GO:0009294 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016458 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0031047 GO:0031974 GO:0031981 GO:0032259 GO:0034641 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044728 GO:0044764 GO:0046483 GO:0048519 GO:0050789 GO:0051276 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080188 GO:0090304 GO:0098687 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00310 ko04211 map00310 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

600

Amino Acids

67.54

Weight (kDa)

6.18

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	182 - 334	2.9e-52	SAD/SRA domain
SET	PF00856	453 - 585	3.5e-11	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13460 AT4G13460
fragaria_vesca	FvH4_2g20121
malus_domestica	MD13G1224000.v1.1 MD16G1228800.v1.1
prunus_persica	Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1 Prupe.1G050800_v2.0.a1
pyrus_communis	pycom13g19790
rosa_chinensis	RchiOBHm_Chr4g0395951
rosa_laevigata	RLG00000009586
rosa_multiflora	Rmu_sc0001103.1_g000009
rosa_roxburghii	Rroxscaffold_5G00340700
rosa_rugosa	Rorug03G0353200 Rorug03G0353300
rosa_samantha	Rh4AG063100 Rh4AG064100 Rh4BG062900 Rh4CG069200 Rh4DG059100
rosa_wichuraiana	Rw4G005180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	972
AarI	CACCTGC	1 cut(s)	1192
Acc36I	ACCTGC	1 cut(s)	1192
AccB7I	CCANNNNNTGG	1 cut(s)	799
AccI	GTMKAC	2 cut(s)	123, 1412
AccII	CGCG	4 cut(s)	110, 164, 245, 1546
AclWI	GGATC	2 cut(s)	428, 1098
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	1 cut(s)	1446
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	3 cut(s)	311, 710, 1633
AfiI	CCNNNNNNNGG	6 cut(s)	145, 239, 461, 799, 1010, 1573
AflII	CTTAAG	1 cut(s)	1025
AgsI	TTSAA	4 cut(s)	60, 848, 932, 1132
AhdI	GACNNNNNGTC	1 cut(s)	235
AjiI	CACGTC	1 cut(s)	121
AjuI	GAANNNNNNNTTGG	2 cut(s)	803, 835
Alw21I	GWGCWC	6 cut(s)	153, 333, 504, 665, 790, 1019
Alw26I	GTCTC	2 cut(s)	201, 703
Alw44I	GTGCAC	1 cut(s)	786
AlwI	GGATC	2 cut(s)	428, 1098
AlwNI	CAGNNNCTG	3 cut(s)	283, 799, 1766
Ama87I	CYCGRG	1 cut(s)	474
AoxI	GGCC	4 cut(s)	102, 489, 1052, 1067
ApaLI	GTGCAC	1 cut(s)	786
ApeKI	GCWGC	8 cut(s)	274, 277, 280, 298, 316, 654, 1000, 1099
ApoI	RAATTY	1 cut(s)	1446
AspLEI	GCGC	4 cut(s)	112, 245, 1397, 1546
AspS9I	GGNCC	9 cut(s)	115, 229, 361, 471, 489, 508, 549, 1153, 1266
AsuC2I	CCSGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
AsuHPI	GGTGA	4 cut(s)	334, 584, 1297, 1475
AvaI	CYCGRG	1 cut(s)	474
AvaII	GGWCC	8 cut(s)	115, 229, 361, 471, 508, 549, 1153, 1266
BaeGI	GKGCMC	1 cut(s)	790
BanII	GRGCYC	6 cut(s)	8, 153, 333, 519, 665, 1019
BauI	CACGAG	1 cut(s)	1429
BbsI	GAAGAC	1 cut(s)	398
Bbv12I	GWGCWC	6 cut(s)	153, 333, 504, 665, 790, 1019
BbvI	GCAGC	8 cut(s)	286, 289, 292, 310, 328, 666, 1012, 1111
BccI	CCATC	5 cut(s)	905, 1003, 1454, 1491, 1642
BceAI	ACGGC	3 cut(s)	232, 1039, 1260
BciVI	GTATCC	1 cut(s)	606
BclI	TGATCA	2 cut(s)	1147, 1669
BcnI	CCSGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
BcoDI	GTCTC	2 cut(s)	201, 703
BfaI	CTAG	1 cut(s)	65
BfoI	RGCGCY	1 cut(s)	1398
BfrI	CTTAAG	1 cut(s)	1025
BfuAI	ACCTGC	1 cut(s)	1192
BfuI	GTATCC	1 cut(s)	606
BglII	AGATCT	1 cut(s)	1527
Bme1390I	CCNGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
Bme18I	GGWCC	8 cut(s)	115, 229, 361, 471, 508, 549, 1153, 1266
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmeT110I	CYCGRG	1 cut(s)	474
BmgBI	CACGTC	1 cut(s)	121
BmgT120I	GGNCC	9 cut(s)	115, 229, 361, 471, 489, 508, 549, 1153, 1266
BmiI	GGNNCC	7 cut(s)	231, 473, 509, 550, 675, 1155, 1267
BmrFI	CCNGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
BmsI	GCATC	3 cut(s)	390, 715, 1132
BpiI	GAAGAC	1 cut(s)	398
BplI	GAGNNNNNCTC	4 cut(s)	1410, 1442, 1621, 1653
BpmI	CTGGAG	2 cut(s)	821, 1437
BpuEI	CTTGAG	1 cut(s)	71
BpuMI	CCSGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
Bsa29I	ATCGAT	1 cut(s)	1486
BsaBI	GATNNNNATC	2 cut(s)	419, 1146
BsaHI	GRCGYC	1 cut(s)	219
BsaJI	CCNNGG	6 cut(s)	474, 475, 495, 511, 1070, 1455
BsaWI	WCCGGW	2 cut(s)	253, 1117
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 140, 552, 582
Bsc4I	CCNNNNNNNGG	6 cut(s)	145, 239, 461, 799, 1010, 1573
Bse118I	RCCGGY	1 cut(s)	1391
Bse1I	ACTGG	2 cut(s)	1335, 1420
Bse3DI	GCAATG	3 cut(s)	788, 1590, 1716
Bse8I	GATNNNNATC	2 cut(s)	419, 1146
BseCI	ATCGAT	1 cut(s)	1486
BseDI	CCNNGG	6 cut(s)	474, 475, 495, 511, 1070, 1455
BseGI	GGATG	5 cut(s)	405, 721, 730, 1465, 1594
BseJI	GATNNNNATC	2 cut(s)	419, 1146
BseLI	CCNNNNNNNGG	6 cut(s)	145, 239, 461, 799, 1010, 1573
BseMI	GCAATG	3 cut(s)	788, 1590, 1716
BseMII	CTCAG	4 cut(s)	364, 996, 1538, 1721
BseNI	ACTGG	2 cut(s)	1335, 1420
BseRI	GAGGAG	3 cut(s)	452, 841, 1716
BseSI	GKGCMC	1 cut(s)	790
BseXI	GCAGC	8 cut(s)	286, 289, 292, 310, 328, 666, 1012, 1111
BseYI	CCCAGC	1 cut(s)	728
BsgI	GTGCAG	2 cut(s)	317, 1673
Bsh1236I	CGCG	4 cut(s)	110, 164, 245, 1546
Bsh1285I	CGRYCG	2 cut(s)	99, 323
BshFI	GGCC	4 cut(s)	104, 491, 1054, 1069
BshVI	ATCGAT	1 cut(s)	1486
BsiEI	CGRYCG	2 cut(s)	99, 323
BsiHKAI	GWGCWC	6 cut(s)	153, 333, 504, 665, 790, 1019
BsiHKCI	CYCGRG	1 cut(s)	474
BslFI	GGGAC	2 cut(s)	521, 1279
BslI	CCNNNNNNNGG	6 cut(s)	145, 239, 461, 799, 1010, 1573
BsmAI	GTCTC	2 cut(s)	201, 703
BsmBI	CGTCTC	2 cut(s)	201, 703
BsmFI	GGGAC	2 cut(s)	521, 1279
BsnI	GGCC	4 cut(s)	104, 491, 1054, 1069
BsoBI	CYCGRG	1 cut(s)	474
Bsp1286I	GDGCHC	8 cut(s)	8, 153, 333, 504, 519, 665, 790, 1019
Bsp143I	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
Bsp19I	CCATGG	1 cut(s)	1455
BspANI	GGCC	4 cut(s)	104, 491, 1054, 1069
BspCNI	CTCAG	4 cut(s)	363, 997, 1537, 1722
BspDI	ATCGAT	1 cut(s)	1486
BspFNI	CGCG	4 cut(s)	110, 164, 245, 1546
BspLI	GGNNCC	7 cut(s)	231, 473, 509, 550, 675, 1155, 1267
BspMI	ACCTGC	1 cut(s)	1192
BspPI	GGATC	2 cut(s)	428, 1098
BspQI	GCTCTTC	1 cut(s)	158
BspTI	CTTAAG	1 cut(s)	1025
BsrDI	GCAATG	3 cut(s)	788, 1590, 1716
BsrFI	RCCGGY	1 cut(s)	1391
BsrI	ACTGG	2 cut(s)	1335, 1420
BssAI	RCCGGY	1 cut(s)	1391
BssECI	CCNNGG	6 cut(s)	474, 475, 495, 511, 1070, 1455
BssMI	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
BssNAI	GTATAC	1 cut(s)	1413
BssNI	GRCGYC	1 cut(s)	219
BssSI	CACGAG	1 cut(s)	1429
BssT1I	CCWWGG	1 cut(s)	1455
Bst1107I	GTATAC	1 cut(s)	1413
Bst2BI	CACGAG	1 cut(s)	1429
Bst4CI	ACNGT	2 cut(s)	512, 530
Bst6I	CTCTTC	2 cut(s)	158, 584
BstACI	GRCGYC	1 cut(s)	219
BstAFI	CTTAAG	1 cut(s)	1025
BstC8I	GCNNGC	4 cut(s)	285, 489, 1393, 1440
BstDEI	CTNAG	7 cut(s)	350, 1005, 1043, 1082, 1175, 1524, 1730
BstDSI	CCRYGG	2 cut(s)	511, 1455
BstEII	GGTNACC	2 cut(s)	340, 572
BstF5I	GGATG	5 cut(s)	405, 721, 730, 1465, 1594
BstFNI	CGCG	4 cut(s)	110, 164, 245, 1546
BstH2I	RGCGCY	1 cut(s)	1398
BstHHI	GCGC	4 cut(s)	112, 245, 1397, 1546
BstKTI	GATC	9 cut(s)	99, 349, 423, 1093, 1150, 1346, 1476, 1530, 1672
BstMAI	GTCTC	2 cut(s)	201, 703
BstMBI	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
BstMCI	CGRYCG	2 cut(s)	99, 323
BstMWI	GCNNNNNNNGC	4 cut(s)	195, 198, 280, 660
BstNSI	RCATGY	1 cut(s)	1391
BstPI	GGTNACC	2 cut(s)	340, 572
BstSCI	CCNGG	9 cut(s)	231, 336, 395, 454, 473, 474, 504, 556, 649
BstSLI	GKGCMC	1 cut(s)	790
BstUI	CGCG	4 cut(s)	110, 164, 245, 1546
BstV1I	GCAGC	8 cut(s)	286, 289, 292, 310, 328, 666, 1012, 1111
BstV2I	GAAGAC	1 cut(s)	398
BstX2I	RGATCY	2 cut(s)	1090, 1527
BstYI	RGATCY	2 cut(s)	1090, 1527
BstZ17I	GTATAC	1 cut(s)	1413
Bsu15I	ATCGAT	1 cut(s)	1486
BsuI	GTATCC	1 cut(s)	606
BsuRI	GGCC	4 cut(s)	104, 491, 1054, 1069
BsuTUI	ATCGAT	1 cut(s)	1486
BtgI	CCRYGG	2 cut(s)	511, 1455
BtrI	CACGTC	1 cut(s)	121
BtsCI	GGATG	5 cut(s)	405, 721, 730, 1465, 1594
BtsI	GCAGTG	2 cut(s)	1295, 1767
BtsIMutI	CAGTG	2 cut(s)	1295, 1767
BveI	ACCTGC	1 cut(s)	1192
Cac8I	GCNNGC	4 cut(s)	285, 489, 1393, 1440
CaiI	CAGNNNCTG	3 cut(s)	283, 799, 1766
CfoI	GCGC	4 cut(s)	112, 245, 1397, 1546
Cfr10I	RCCGGY	1 cut(s)	1391
Cfr13I	GGNCC	9 cut(s)	115, 229, 361, 471, 489, 508, 549, 1153, 1266
Cfr9I	CCCGGG	1 cut(s)	474
ClaI	ATCGAT	1 cut(s)	1486
CseI	GACGC	2 cut(s)	208, 1535
Csp6I	GTAC	3 cut(s)	310, 709, 1632
CviAII	CATG	8 cut(s)	592, 617, 755, 878, 1199, 1313, 1388, 1456
CviQI	GTAC	3 cut(s)	310, 709, 1632
DdeI	CTNAG	7 cut(s)	350, 1005, 1043, 1082, 1175, 1524, 1730
DpnI	GATC	9 cut(s)	98, 348, 422, 1092, 1149, 1345, 1475, 1529, 1671
DpnII	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
DriI	GACNNNNNGTC	1 cut(s)	235
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	2 cut(s)	158, 584
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	2 cut(s)	158, 584
EciI	GGCGGA	4 cut(s)	37, 302, 449, 1548
Ecl136II	GAGCTC	4 cut(s)	151, 331, 663, 1017
Eco130I	CCWWGG	1 cut(s)	1455
Eco24I	GRGCYC	6 cut(s)	8, 153, 333, 519, 665, 1019
Eco47I	GGWCC	8 cut(s)	115, 229, 361, 471, 508, 549, 1153, 1266
Eco53kI	GAGCTC	4 cut(s)	151, 331, 663, 1017
Eco88I	CYCGRG	1 cut(s)	474
Eco91I	GGTNACC	2 cut(s)	340, 572
EcoICRI	GAGCTC	4 cut(s)	151, 331, 663, 1017
EcoO109I	RGGNCCY	2 cut(s)	1153, 1266
EcoO65I	GGTNACC	2 cut(s)	340, 572
EcoT14I	CCWWGG	1 cut(s)	1455
EcoT22I	ATGCAT	1 cut(s)	837
EcoT38I	GRGCYC	6 cut(s)	8, 153, 333, 519, 665, 1019
ErhI	CCWWGG	1 cut(s)	1455
Esp3I	CGTCTC	2 cut(s)	201, 703
FaeI	CATG	8 cut(s)	595, 620, 758, 881, 1202, 1316, 1391, 1459
FaqI	GGGAC	2 cut(s)	521, 1279
FatI	CATG	8 cut(s)	591, 616, 754, 877, 1198, 1312, 1387, 1455
FauI	CCCGC	4 cut(s)	321, 480, 698, 1293
FbaI	TGATCA	2 cut(s)	1147, 1669
FblI	GTMKAC	2 cut(s)	123, 1412
FokI	GGATG	5 cut(s)	412, 728, 737, 1472, 1601
FriOI	GRGCYC	6 cut(s)	8, 153, 333, 519, 665, 1019
FspBI	CTAG	1 cut(s)	65
GlaI	GCGC	4 cut(s)	111, 244, 1396, 1545
GsaI	CCCAGC	1 cut(s)	732
GsuI	CTGGAG	2 cut(s)	821, 1437
HaeII	RGCGCY	1 cut(s)	1398
HaeIII	GGCC	4 cut(s)	104, 491, 1054, 1069
HgaI	GACGC	2 cut(s)	208, 1535
HhaI	GCGC	4 cut(s)	112, 245, 1397, 1546
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	8 cut(s)	595, 620, 758, 881, 1202, 1316, 1391, 1459
Hin6I	GCGC	4 cut(s)	110, 243, 1395, 1544
HinP1I	GCGC	4 cut(s)	110, 243, 1395, 1544
HindIII	AAGCTT	1 cut(s)	980
HphI	GGTGA	4 cut(s)	334, 584, 1297, 1475
Hpy166II	GTNNAC	3 cut(s)	124, 788, 1413
Hpy188I	TCNGA	8 cut(s)	130, 148, 183, 420, 1296, 1495, 1527, 1731
Hpy188III	TCNNGA	9 cut(s)	23, 88, 227, 388, 929, 1151, 1429, 1535, 1574
Hpy8I	GTNNAC	3 cut(s)	124, 788, 1413
Hpy99I	CGWCG	3 cut(s)	224, 359, 688
HpyAV	CCTTC	1 cut(s)	1279
HpyCH4III	ACNGT	2 cut(s)	512, 530
HpyCH4IV	ACGT	1 cut(s)	120
HpyCH4V	TGCA	7 cut(s)	298, 788, 835, 1187, 1583, 1654, 1709
HpyF10VI	GCNNNNNNNGC	4 cut(s)	195, 198, 280, 660
HpyF3I	CTNAG	7 cut(s)	350, 1005, 1043, 1082, 1175, 1524, 1730
HpySE526I	ACGT	1 cut(s)	120
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	8 cut(s)	595, 620, 758, 881, 1202, 1316, 1391, 1459
HspAI	GCGC	4 cut(s)	110, 243, 1395, 1544
KroI	GCCGGC	1 cut(s)	1391
KroNI	GCCGGC	1 cut(s)	1393
Ksp22I	TGATCA	2 cut(s)	1147, 1669
Kzo9I	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
LguI	GCTCTTC	1 cut(s)	158
LmnI	GCTCC	7 cut(s)	148, 507, 595, 673, 1014, 1022, 1435
Lsp1109I	GCAGC	8 cut(s)	286, 289, 292, 310, 328, 666, 1012, 1111
LweI	GCATC	3 cut(s)	390, 715, 1132
MaeI	CTAG	1 cut(s)	65
MaeII	ACGT	1 cut(s)	120
MaeIII	GTNAC	4 cut(s)	340, 572, 1303, 1796
MalI	GATC	9 cut(s)	98, 348, 422, 1092, 1149, 1345, 1475, 1529, 1671
MboI	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
MboII	GAAGA	9 cut(s)	145, 316, 403, 460, 571, 574, 638, 883, 1123
MflI	RGATCY	2 cut(s)	1090, 1527
MhlI	GDGCHC	8 cut(s)	8, 153, 333, 504, 519, 665, 790, 1019
MluCI	AATT	4 cut(s)	18, 55, 636, 1446
MlyI	GAGTC	3 cut(s)	245, 570, 1048
MmeI	TCCRAC	4 cut(s)	801, 1217, 1274, 1574
Mph1103I	ATGCAT	1 cut(s)	837
MroNI	GCCGGC	1 cut(s)	1391
MseI	TTAA	4 cut(s)	774, 978, 1026, 1739
MslI	CAYNNNNRTG	1 cut(s)	428
MspA1I	CMGCKG	3 cut(s)	283, 301, 319
MspCI	CTTAAG	1 cut(s)	1025
MspR9I	CCNGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
MvnI	CGCG	4 cut(s)	110, 164, 245, 1546
MwoI	GCNNNNNNNGC	4 cut(s)	195, 198, 280, 660
NaeI	GCCGGC	1 cut(s)	1393
NciI	CCSGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
NcoI	CCATGG	1 cut(s)	1455
NdeII	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
NgoMIV	GCCGGC	1 cut(s)	1391
NlaIII	CATG	8 cut(s)	595, 620, 758, 881, 1202, 1316, 1391, 1459
NlaIV	GGNNCC	7 cut(s)	231, 473, 509, 550, 675, 1155, 1267
NmeAIII	GCCGAG	2 cut(s)	1060, 1095
NmuCI	GTSAC	3 cut(s)	340, 572, 1303
NsiI	ATGCAT	1 cut(s)	837
NspI	RCATGY	1 cut(s)	1391
PaqCI	CACCTGC	1 cut(s)	1192
PciSI	GCTCTTC	1 cut(s)	158
PcsI	WCGNNNNNNNCGW	2 cut(s)	126, 216
PdiI	GCCGGC	1 cut(s)	1393
PfeI	GAWTC	9 cut(s)	178, 410, 415, 451, 874, 925, 990, 1114, 1297
PflFI	GACNNNGTC	2 cut(s)	119, 218
PflMI	CCANNNNNTGG	1 cut(s)	799
PfoI	TCCNGGA	2 cut(s)	504, 556
Ple19I	CGATCG	1 cut(s)	99
PleI	GAGTC	3 cut(s)	244, 569, 1047
PpsI	GAGTC	3 cut(s)	244, 569, 1047
PpuMI	RGGWCCY	2 cut(s)	1153, 1266
PsiI	TTATAA	1 cut(s)	972
Psp124BI	GAGCTC	4 cut(s)	153, 333, 665, 1019
Psp5II	RGGWCCY	2 cut(s)	1153, 1266
PspEI	GGTNACC	2 cut(s)	340, 572
PspFI	CCCAGC	1 cut(s)	728
PspN4I	GGNNCC	7 cut(s)	231, 473, 509, 550, 675, 1155, 1267
PspPI	GGNCC	9 cut(s)	115, 229, 361, 471, 489, 508, 549, 1153, 1266
PspPPI	RGGWCCY	2 cut(s)	1153, 1266
PstNI	CAGNNNCTG	3 cut(s)	283, 799, 1766
PsuI	RGATCY	2 cut(s)	1090, 1527
PsyI	GACNNNGTC	2 cut(s)	119, 218
PvuI	CGATCG	1 cut(s)	99
PvuII	CAGCTG	1 cut(s)	283
RsaI	GTAC	3 cut(s)	311, 710, 1633
RsaNI	GTAC	3 cut(s)	310, 709, 1632
RseI	CAYNNNNRTG	1 cut(s)	428
SacI	GAGCTC	4 cut(s)	153, 333, 665, 1019
SapI	GCTCTTC	1 cut(s)	158
SaqAI	TTAA	4 cut(s)	774, 978, 1026, 1739
Sau3AI	GATC	9 cut(s)	96, 346, 420, 1090, 1147, 1343, 1473, 1527, 1669
Sau96I	GGNCC	9 cut(s)	115, 229, 361, 471, 489, 508, 549, 1153, 1266
SchI	GAGTC	3 cut(s)	245, 570, 1048
ScrFI	CCNGG	9 cut(s)	233, 338, 397, 456, 475, 476, 506, 558, 651
SduI	GDGCHC	8 cut(s)	8, 153, 333, 504, 519, 665, 790, 1019
SfaNI	GCATC	3 cut(s)	390, 715, 1132
SinI	GGWCC	8 cut(s)	115, 229, 361, 471, 508, 549, 1153, 1266
SmaI	CCCGGG	1 cut(s)	476
SmiMI	CAYNNNNRTG	1 cut(s)	428
SmlI	CTYRAG	2 cut(s)	86, 1025
SmoI	CTYRAG	2 cut(s)	86, 1025
Sse9I	AATT	4 cut(s)	18, 55, 636, 1446
SspMI	CTAG	1 cut(s)	65
SstI	GAGCTC	4 cut(s)	153, 333, 665, 1019
StyD4I	CCNGG	9 cut(s)	231, 336, 395, 454, 473, 474, 504, 556, 649
StyI	CCWWGG	1 cut(s)	1455
TaaI	ACNGT	2 cut(s)	512, 530
TaiI	ACGT	1 cut(s)	123
TaqI	TCGA	7 cut(s)	95, 323, 413, 665, 890, 993, 1486
TasI	AATT	4 cut(s)	18, 55, 636, 1446
TauI	GCSGC	7 cut(s)	107, 110, 192, 195, 198, 201, 494
TfiI	GAWTC	9 cut(s)	178, 410, 415, 451, 874, 925, 990, 1114, 1297
Tru1I	TTAA	4 cut(s)	774, 978, 1026, 1739
Tru9I	TTAA	4 cut(s)	774, 978, 1026, 1739
TscAI	CASTG	2 cut(s)	1295, 1767
TseFI	GTSAC	3 cut(s)	340, 572, 1303
TseI	GCWGC	8 cut(s)	274, 277, 280, 298, 316, 654, 1000, 1099
Tsp45I	GTSAC	3 cut(s)	340, 572, 1303
TspDTI	ATGAA	2 cut(s)	866, 1785
TspGWI	ACGGA	2 cut(s)	365, 484
TspMI	CCCGGG	1 cut(s)	474
TspRI	CASTG	2 cut(s)	1295, 1767
Tth111I	GACNNNGTC	2 cut(s)	119, 218
Van91I	CCANNNNNTGG	1 cut(s)	799
Vha464I	CTTAAG	1 cut(s)	1025
VneI	GTGCAC	1 cut(s)	786
VpaK11BI	GGWCC	8 cut(s)	115, 229, 361, 471, 508, 549, 1153, 1266
XapI	RAATTY	1 cut(s)	1446
XceI	RCATGY	1 cut(s)	1391
XmaI	CCCGGG	1 cut(s)	474
XmiI	GTMKAC	2 cut(s)	123, 1412
XspI	CTAG	1 cut(s)	65
Zsp2I	ATGCAT	1 cut(s)	837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.