Protein PHR1-LIKE 1-like isoform
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28610 |
| fragaria_vesca | FvH4_2g20730 FvH4_2g20730 |
| malus_domestica | MD00G1060900.v1.1 MD05G1189400.v1.1 |
| prunus_persica | Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 |
| pyrus_communis | pycom05g17450 pycom10g15330 |
| rosa_chinensis | RchiOBHm_Chr6g0286911 |
| rosa_laevigata | RLG00000012527 |
| rosa_multiflora | Rmu_sc0002520.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00181810 |
| rosa_rugosa | Rorug06G0184800 Rorug06G0184900 Rorug06G0185000 |
| rosa_samantha | Rh6AG296700 Rh6BG301300 Rh6CG308800 Rh6DG292600 |
| rosa_wichuraiana | Rw6G025600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 155 |
| AccII | CGCG | 1 cut(s) | 362 |
| AciI | CCGC | 4 cut(s) | 360, 852, 1023, 1159 |
| AclWI | GGATC | 3 cut(s) | 671, 1060, 1385 |
| AcsI | RAATTY | 2 cut(s) | 640, 706 |
| AcuI | CTGAAG | 4 cut(s) | 324, 977, 1146, 1485 |
| AfaI | GTAC | 2 cut(s) | 403, 1223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 100 |
| AgsI | TTSAA | 8 cut(s) | 89, 353, 640, 706, 1105, 1208, 1229, 1241 |
| AjnI | CCWGG | 3 cut(s) | 415, 618, 793 |
| Alw21I | GWGCWC | 1 cut(s) | 64 |
| Alw26I | GTCTC | 4 cut(s) | 58, 98, 736, 1349 |
| AlwI | GGATC | 3 cut(s) | 671, 1060, 1385 |
| ApeKI | GCWGC | 4 cut(s) | 494, 497, 854, 1162 |
| ApoI | RAATTY | 2 cut(s) | 640, 706 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 348, 765, 789 |
| AspS9I | GGNCC | 1 cut(s) | 1020 |
| AsuHPI | GGTGA | 1 cut(s) | 204 |
| AvaII | GGWCC | 1 cut(s) | 1020 |
| AxyI | CCTNAGG | 1 cut(s) | 945 |
| BauI | CACGAG | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 64 |
| BbvCI | CCTCAGC | 2 cut(s) | 838, 1428 |
| BbvI | GCAGC | 4 cut(s) | 481, 484, 866, 1149 |
| BccI | CCATC | 6 cut(s) | 136, 223, 640, 706, 784, 1138 |
| BciT130I | CCWGG | 3 cut(s) | 417, 620, 795 |
| BcoDI | GTCTC | 4 cut(s) | 58, 98, 736, 1349 |
| BfaI | CTAG | 5 cut(s) | 530, 662, 690, 780, 1026 |
| BfmI | CTRYAG | 5 cut(s) | 498, 756, 1139, 1193, 1437 |
| BfuAI | ACCTGC | 1 cut(s) | 155 |
| BglII | AGATCT | 2 cut(s) | 149, 232 |
| BisI | GCNGC | 6 cut(s) | 495, 498, 852, 855, 1160, 1163 |
| BlpI | GCTNAGC | 3 cut(s) | 651, 717, 1308 |
| BlsI | GCNGC | 6 cut(s) | 496, 499, 853, 856, 1161, 1164 |
| Bme1390I | CCNGG | 3 cut(s) | 417, 620, 795 |
| Bme18I | GGWCC | 1 cut(s) | 1020 |
| BmgT120I | GGNCC | 1 cut(s) | 1020 |
| BmiI | GGNNCC | 4 cut(s) | 422, 603, 624, 1434 |
| BmrFI | CCNGG | 3 cut(s) | 417, 620, 795 |
| BmsI | GCATC | 2 cut(s) | 535, 1421 |
| BpmI | CTGGAG | 2 cut(s) | 78, 583 |
| Bpu10I | CCTNAGC | 3 cut(s) | 838, 1428, 1518 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 651, 717, 1308 |
| BpuEI | CTTGAG | 2 cut(s) | 286, 1196 |
| BsaAI | YACGTR | 1 cut(s) | 866 |
| BsaI | GGTCTC | 1 cut(s) | 1349 |
| BsaJI | CCNNGG | 3 cut(s) | 416, 1362, 1473 |
| BsaWI | WCCGGW | 1 cut(s) | 1286 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 814, 844, 1453, 1483 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 100 |
| Bse1I | ACTGG | 4 cut(s) | 80, 566, 1257, 1503 |
| Bse21I | CCTNAGG | 1 cut(s) | 945 |
| Bse3DI | GCAATG | 2 cut(s) | 1253, 1329 |
| BseBI | CCWGG | 3 cut(s) | 417, 620, 795 |
| BseDI | CCNNGG | 3 cut(s) | 416, 1362, 1473 |
| BseGI | GGATG | 3 cut(s) | 742, 1283, 1495 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BseMI | GCAATG | 2 cut(s) | 1253, 1329 |
| BseMII | CTCAG | 9 cut(s) | 665, 683, 731, 749, 852, 1308, 1322, 1419, 1473 |
| BseNI | ACTGG | 4 cut(s) | 80, 566, 1257, 1503 |
| BseRI | GAGGAG | 2 cut(s) | 1065, 1445 |
| BseXI | GCAGC | 4 cut(s) | 481, 484, 866, 1149 |
| Bsh1236I | CGCG | 1 cut(s) | 362 |
| BsiHKAI | GWGCWC | 1 cut(s) | 64 |
| BsiSI | CCGG | 2 cut(s) | 1287, 1487 |
| BslFI | GGGAC | 4 cut(s) | 643, 709, 1438, 1509 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BsmAI | GTCTC | 4 cut(s) | 58, 98, 736, 1349 |
| BsmFI | GGGAC | 4 cut(s) | 643, 709, 1438, 1509 |
| BsmI | GAATGC | 1 cut(s) | 1279 |
| Bso31I | GGTCTC | 1 cut(s) | 1349 |
| Bsp1286I | GDGCHC | 1 cut(s) | 64 |
| Bsp143I | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 651, 717, 1308 |
| BspACI | CCGC | 4 cut(s) | 360, 852, 1023, 1159 |
| BspCNI | CTCAG | 9 cut(s) | 664, 682, 730, 748, 851, 1309, 1321, 1420, 1474 |
| BspFNI | CGCG | 1 cut(s) | 362 |
| BspHI | TCATGA | 1 cut(s) | 889 |
| BspLI | GGNNCC | 4 cut(s) | 422, 603, 624, 1434 |
| BspMAI | CTGCAG | 2 cut(s) | 502, 1143 |
| BspMI | ACCTGC | 1 cut(s) | 155 |
| BspPI | GGATC | 3 cut(s) | 671, 1060, 1385 |
| BspTNI | GGTCTC | 1 cut(s) | 1349 |
| BsrDI | GCAATG | 2 cut(s) | 1253, 1329 |
| BsrI | ACTGG | 4 cut(s) | 80, 566, 1257, 1503 |
| BssECI | CCNNGG | 3 cut(s) | 416, 1362, 1473 |
| BssMI | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| BssSI | CACGAG | 1 cut(s) | 258 |
| BssT1I | CCWWGG | 1 cut(s) | 1362 |
| Bst2BI | CACGAG | 1 cut(s) | 258 |
| Bst2UI | CCWGG | 3 cut(s) | 417, 620, 795 |
| Bst4CI | ACNGT | 5 cut(s) | 185, 297, 389, 848, 1197 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 14, 1424 |
| BstBAI | YACGTR | 1 cut(s) | 866 |
| BstC8I | GCNNGC | 3 cut(s) | 10, 523, 527 |
| BstDSI | CCRYGG | 1 cut(s) | 1473 |
| BstF5I | GGATG | 3 cut(s) | 742, 1283, 1495 |
| BstFNI | CGCG | 1 cut(s) | 362 |
| BstKTI | GATC | 8 cut(s) | 29, 152, 235, 571, 679, 1055, 1122, 1393 |
| BstMAI | GTCTC | 4 cut(s) | 58, 98, 736, 1349 |
| BstMBI | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 14, 368, 848, 868, 1171, 1424 |
| BstNI | CCWGG | 3 cut(s) | 417, 620, 795 |
| BstSCI | CCNGG | 3 cut(s) | 415, 618, 793 |
| BstSFI | CTRYAG | 5 cut(s) | 498, 756, 1139, 1193, 1437 |
| BstUI | CGCG | 1 cut(s) | 362 |
| BstV1I | GCAGC | 4 cut(s) | 481, 484, 866, 1149 |
| BstX2I | RGATCY | 3 cut(s) | 149, 232, 676 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 923 |
| BstYI | RGATCY | 3 cut(s) | 149, 232, 676 |
| Bsu36I | CCTNAGG | 1 cut(s) | 945 |
| BtgI | CCRYGG | 1 cut(s) | 1473 |
| BtsCI | GGATG | 3 cut(s) | 742, 1283, 1495 |
| BtsIMutI | CAGTG | 3 cut(s) | 190, 853, 1122 |
| BveI | ACCTGC | 1 cut(s) | 155 |
| Cac8I | GCNNGC | 3 cut(s) | 10, 523, 527 |
| CciI | TCATGA | 1 cut(s) | 889 |
| Cfr13I | GGNCC | 1 cut(s) | 1020 |
| CseI | GACGC | 4 cut(s) | 300, 351, 1266, 1511 |
| CsiI | ACCWGGT | 1 cut(s) | 618 |
| Csp6I | GTAC | 2 cut(s) | 402, 1222 |
| CviAII | CATG | 8 cut(s) | 46, 161, 396, 890, 992, 1166, 1373, 1388 |
| CviQI | GTAC | 2 cut(s) | 402, 1222 |
| DpnI | GATC | 8 cut(s) | 28, 151, 234, 570, 678, 1054, 1121, 1392 |
| DpnII | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| Eco130I | CCWWGG | 1 cut(s) | 1362 |
| Eco31I | GGTCTC | 1 cut(s) | 1349 |
| Eco47I | GGWCC | 1 cut(s) | 1020 |
| Eco57I | CTGAAG | 4 cut(s) | 324, 977, 1146, 1485 |
| Eco81I | CCTNAGG | 1 cut(s) | 945 |
| EcoRII | CCWGG | 3 cut(s) | 415, 618, 793 |
| EcoT14I | CCWWGG | 1 cut(s) | 1362 |
| ErhI | CCWWGG | 1 cut(s) | 1362 |
| FaeI | CATG | 8 cut(s) | 49, 164, 399, 893, 995, 1169, 1376, 1391 |
| FaqI | GGGAC | 4 cut(s) | 643, 709, 1438, 1509 |
| FatI | CATG | 8 cut(s) | 45, 160, 395, 889, 991, 1165, 1372, 1387 |
| Fnu4HI | GCNGC | 6 cut(s) | 495, 498, 852, 855, 1160, 1163 |
| FokI | GGATG | 3 cut(s) | 729, 1270, 1502 |
| Fsp4HI | GCNGC | 6 cut(s) | 495, 498, 852, 855, 1160, 1163 |
| FspBI | CTAG | 5 cut(s) | 530, 662, 690, 780, 1026 |
| GluI | GCNGC | 6 cut(s) | 495, 498, 852, 855, 1160, 1163 |
| GsuI | CTGGAG | 2 cut(s) | 78, 583 |
| HapII | CCGG | 2 cut(s) | 1287, 1487 |
| HgaI | GACGC | 4 cut(s) | 300, 351, 1266, 1511 |
| Hin1II | CATG | 8 cut(s) | 49, 164, 399, 893, 995, 1169, 1376, 1391 |
| HincII | GTYRAC | 2 cut(s) | 580, 913 |
| HindII | GTYRAC | 2 cut(s) | 580, 913 |
| HindIII | AAGCTT | 2 cut(s) | 345, 976 |
| HinfI | GANTC | 9 cut(s) | 51, 125, 222, 280, 407, 893, 1040, 1180, 1478 |
| HpaI | GTTAAC | 1 cut(s) | 913 |
| HpaII | CCGG | 2 cut(s) | 1287, 1487 |
| HphI | GGTGA | 1 cut(s) | 204 |
| Hpy166II | GTNNAC | 2 cut(s) | 580, 913 |
| Hpy188I | TCNGA | 8 cut(s) | 24, 343, 453, 1048, 1155, 1185, 1318, 1483 |
| Hpy8I | GTNNAC | 2 cut(s) | 580, 913 |
| Hpy99I | CGWCG | 1 cut(s) | 1282 |
| HpyAV | CCTTC | 9 cut(s) | 95, 105, 348, 800, 843, 1043, 1235, 1311, 1323 |
| HpyCH4III | ACNGT | 5 cut(s) | 185, 297, 389, 848, 1197 |
| HpyCH4IV | ACGT | 1 cut(s) | 865 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 14, 368, 848, 868, 1171, 1424 |
| HpySE526I | ACGT | 1 cut(s) | 865 |
| Hsp92II | CATG | 8 cut(s) | 49, 164, 399, 893, 995, 1169, 1376, 1391 |
| KspAI | GTTAAC | 1 cut(s) | 913 |
| Kzo9I | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| LmnI | GCTCC | 5 cut(s) | 59, 778, 1369, 1432, 1474 |
| Lsp1109I | GCAGC | 4 cut(s) | 481, 484, 866, 1149 |
| LweI | GCATC | 2 cut(s) | 535, 1421 |
| MabI | ACCWGGT | 1 cut(s) | 618 |
| MaeI | CTAG | 5 cut(s) | 530, 662, 690, 780, 1026 |
| MaeII | ACGT | 1 cut(s) | 865 |
| MaeIII | GTNAC | 8 cut(s) | 41, 167, 197, 532, 589, 820, 1001, 1197 |
| MalI | GATC | 8 cut(s) | 28, 151, 234, 570, 678, 1054, 1121, 1392 |
| MboI | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| MboII | GAAGA | 6 cut(s) | 60, 227, 324, 563, 1094, 1220 |
| MflI | RGATCY | 3 cut(s) | 149, 232, 676 |
| MhlI | GDGCHC | 1 cut(s) | 64 |
| MluCI | AATT | 9 cut(s) | 192, 204, 640, 706, 813, 1067, 1203, 1349, 1530 |
| MlyI | GAGTC | 5 cut(s) | 60, 119, 289, 902, 1034 |
| MmeI | TCCRAC | 1 cut(s) | 854 |
| MnlI | CCTC | 8 cut(s) | 267, 310, 847, 1086, 1312, 1369, 1423, 1524 |
| MroXI | GAANNNNTTC | 3 cut(s) | 348, 765, 789 |
| MseI | TTAA | 3 cut(s) | 912, 1070, 1533 |
| MspI | CCGG | 2 cut(s) | 1287, 1487 |
| MspR9I | CCNGG | 3 cut(s) | 417, 620, 795 |
| Mva1269I | GAATGC | 1 cut(s) | 1279 |
| MvaI | CCWGG | 3 cut(s) | 417, 620, 795 |
| MvnI | CGCG | 1 cut(s) | 362 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 14, 368, 848, 868, 1171, 1424 |
| NdeII | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| NlaIII | CATG | 8 cut(s) | 49, 164, 399, 893, 995, 1169, 1376, 1391 |
| NlaIV | GGNNCC | 4 cut(s) | 422, 603, 624, 1434 |
| NmuCI | GTSAC | 4 cut(s) | 41, 167, 197, 1001 |
| PagI | TCATGA | 1 cut(s) | 889 |
| PctI | GAATGC | 1 cut(s) | 1279 |
| PdmI | GAANNNNTTC | 3 cut(s) | 348, 765, 789 |
| PfeI | GAWTC | 4 cut(s) | 222, 407, 1180, 1478 |
| PkrI | GCNGC | 6 cut(s) | 496, 499, 853, 856, 1161, 1164 |
| PleI | GAGTC | 5 cut(s) | 59, 119, 288, 901, 1034 |
| PpsI | GAGTC | 5 cut(s) | 59, 119, 288, 901, 1034 |
| Ppu21I | YACGTR | 1 cut(s) | 866 |
| Psp6I | CCWGG | 3 cut(s) | 415, 618, 793 |
| PspGI | CCWGG | 3 cut(s) | 415, 618, 793 |
| PspN4I | GGNNCC | 4 cut(s) | 422, 603, 624, 1434 |
| PspPI | GGNCC | 1 cut(s) | 1020 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1489, 1521 |
| PstI | CTGCAG | 2 cut(s) | 502, 1143 |
| PsuI | RGATCY | 3 cut(s) | 149, 232, 676 |
| RsaI | GTAC | 2 cut(s) | 403, 1223 |
| RsaNI | GTAC | 2 cut(s) | 402, 1222 |
| SaqAI | TTAA | 3 cut(s) | 912, 1070, 1533 |
| SatI | GCNGC | 6 cut(s) | 495, 498, 852, 855, 1160, 1163 |
| Sau3AI | GATC | 8 cut(s) | 26, 149, 232, 568, 676, 1052, 1119, 1390 |
| Sau96I | GGNCC | 1 cut(s) | 1020 |
| SchI | GAGTC | 5 cut(s) | 60, 119, 289, 902, 1034 |
| ScrFI | CCNGG | 3 cut(s) | 417, 620, 795 |
| SduI | GDGCHC | 1 cut(s) | 64 |
| SexAI | ACCWGGT | 1 cut(s) | 618 |
| SfaNI | GCATC | 2 cut(s) | 535, 1421 |
| SfcI | CTRYAG | 5 cut(s) | 498, 756, 1139, 1193, 1437 |
| SinI | GGWCC | 1 cut(s) | 1020 |
| SmlI | CTYRAG | 2 cut(s) | 301, 1175 |
| SmoI | CTYRAG | 2 cut(s) | 301, 1175 |
| Sse9I | AATT | 9 cut(s) | 192, 204, 640, 706, 813, 1067, 1203, 1349, 1530 |
| SsiI | CCGC | 4 cut(s) | 360, 852, 1023, 1159 |
| SspMI | CTAG | 5 cut(s) | 530, 662, 690, 780, 1026 |
| StyD4I | CCNGG | 3 cut(s) | 415, 618, 793 |
| StyI | CCWWGG | 1 cut(s) | 1362 |
| TaaI | ACNGT | 5 cut(s) | 185, 297, 389, 848, 1197 |
| TaiI | ACGT | 1 cut(s) | 868 |
| TaqI | TCGA | 4 cut(s) | 140, 903, 1080, 1116 |
| TasI | AATT | 9 cut(s) | 192, 204, 640, 706, 813, 1067, 1203, 1349, 1530 |
| TauI | GCSGC | 2 cut(s) | 854, 1162 |
| TfiI | GAWTC | 4 cut(s) | 222, 407, 1180, 1478 |
| Tru1I | TTAA | 3 cut(s) | 912, 1070, 1533 |
| Tru9I | TTAA | 3 cut(s) | 912, 1070, 1533 |
| TscAI | CASTG | 3 cut(s) | 190, 853, 1129 |
| TseFI | GTSAC | 4 cut(s) | 41, 167, 197, 1001 |
| TseI | GCWGC | 4 cut(s) | 494, 497, 854, 1162 |
| Tsp45I | GTSAC | 4 cut(s) | 41, 167, 197, 1001 |
| TspGWI | ACGGA | 1 cut(s) | 1490 |
| TspRI | CASTG | 3 cut(s) | 190, 853, 1129 |
| VpaK11BI | GGWCC | 1 cut(s) | 1020 |
| XapI | RAATTY | 2 cut(s) | 640, 706 |
| XbaI | TCTAGA | 2 cut(s) | 689, 779 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 870 |
| XmnI | GAANNNNTTC | 3 cut(s) | 348, 765, 789 |
| XspI | CTAG | 5 cut(s) | 530, 662, 690, 780, 1026 |