Prupe.8G216800_v2.0.a1
MYB Family

Protein PHR1-LIKE 1-like isoform

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
19838553 .. 19843705
5153 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G216800.5

Sequence Viewer

Length: 1512 bp
ATGGAGGCACGCCCTGCTTTGTCCATTCAGAGATCAGCTGCAAAACAGTTTACTCACCTGGGGGTCTCTGCAGCAATGTCTTCATCTTTACCAGTCCTTCCAACCTCTATGGAAGAGACATATCCCAAGTTGCCTGACTCCCAACAGGTGTCCATGGAAAGAGAACTTATGACAAGGCCTGTTGTGCATGCAGGTCACTTAACCTCCAACAGTGGAGTAGTTGGTCACATATTTTCATCATCATCAGGATTCTCAACAGATCTTCACTACTCAGCTCTTTCACCTCATGAAAAACAGCCAAAAAACAATCCTTTCATTTCTCAGTCATCGAGTTCTGGGTGTTTGCCATTACCCCATTCTTCTCATTCAGGGTTTCTTCAATCTACATCGTCTTGTCCTTATTCCAAAGGAAACAGTGGTTCCTGGTGTACAGATTCACTGCCAGGTTTCCTTGATTTTCCTGTAAATAACCATATCGAGAATAGTCAAGTAGAGAGCAGTAGTTGTAGCGGGATTTTGCCTGCTGAAGAATTTGTTAAGCGAAATGATTGGCAGGAATGGGCAGACCAGCTAATTACTGATGATGATGCTTTGACTTCTAACTGGAATGAGCTTCTTGTTGACAACAATGTTACAGATCTGGAACCAAAGATAAAATATCAGGTTCCCAAACCATCTTCGAATTTTTCAGCTCAGCAGCCCCAAGTTCATCAGCAACAACCTGCTCCATCTGGGGAAATCATTCCTGCTCCTTCTAGAGAACTCATTCCAGCTCCATCTAGGGAAATCATTTCTGTTACTGCTCCTTCCTCAGCTAATAGTGCCCCCGCCAAGGCGCGCATGCGTTGGACACCAGAACTCCATGAAGCCTTTGTGGAGGCTGTGAACCAACTTGGCGGTAGTGAAAGAGCAACTCCTAAGGGTGTGCTAAAGCTCATGAAAGTTGAAAGCTTGACTATCTATCATGTGAAAAGTCATTTGCAGAAATACAGGACTGCTAGGTACAGACCAGAGTCATCTGAAGGGTCCTCGGAGAAGAAATTAACTCCCATTGAAGAAATGACTTCTCTTGACTTGAAAACGGGTATCGAGATCACTGAAGCTCTGCGGCTGCAGATGGAAGTTCAAAAACGGCTGCATGAACAGCTTGAGATTCAAAGAAATCTACAATTACGGATAGAAGAACAAGGCAAGTATCTTCAAATGATGTTTGAGAAGCAATGCAAGACGGGTATCGACACGCTGAAGGCTTCATCATCGAATTTGGACGACCCCGCTGACCCTTTAGATGCAATGCAAGCTTGTCCTGACAAAAGTGAACTGGAGCCCTCCAAGGTGGACCTTGGTAAGACTGAAACTGATCCAGTTAAAGCCAACACCAAATCTGAAGAAGGCTCACTGGAGCTGTCAGGGAAGCAGAAGGTGCCTGAAACAGAAGCTCCTGAGGATCCTGAGCTAGATGTTTCTGTGTCCAGCTCCCAACCTCCAAAGCGTGCCAAAATAAAAGAATAA

Protein Analysis

504

Amino Acids

55.35

Weight (kDa)

5.44

Isoelectric Point (pI)

66.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 182, 730
AccB1I GGYRCC 1 cut(s) 1423
AccII CGCG 1 cut(s) 838
AciI CCGC 5 cut(s) 510, 828, 897, 1108, 1275
AclWI GGATC 3 cut(s) 1355, 1442, 1455
AcsI RAATTY 3 cut(s) 530, 682, 1261
AcuI CTGAAG 5 cut(s) 546, 1041, 1119, 1265, 1407
AfaI GTAC 2 cut(s) 430, 1004
AfiI CCNNNNNNNGG 1 cut(s) 832
AgsI TTSAA 7 cut(s) 380, 947, 1055, 1078, 1127, 1157, 1202
AjnI CCWGG 3 cut(s) 57, 422, 442
Alw26I GTCTC 2 cut(s) 70, 110
AlwI GGATC 3 cut(s) 1355, 1442, 1455
AoxI GGCC 1 cut(s) 176
ApeKI GCWGC 5 cut(s) 38, 71, 697, 1111, 1135
ApoI RAATTY 3 cut(s) 530, 682, 1261
Asp700I GAANNNNTTC 2 cut(s) 741, 765
AspLEI GCGC 2 cut(s) 838, 840
AspS9I GGNCC 2 cut(s) 1026, 1339
AsuHPI GGTGA 2 cut(s) 47, 273
AsuII TTCGAA 1 cut(s) 680
AvaII GGWCC 2 cut(s) 1026, 1339
AxyI CCTNAGG 2 cut(s) 918, 1443
BaeGI GKGCMC 1 cut(s) 826
BamHI GGATCC 1 cut(s) 1447
BanI GGYRCC 1 cut(s) 1423
BanII GRGCYC 1 cut(s) 1329
BbsI GAAGAC 1 cut(s) 72
BbvCI CCTCAGC 1 cut(s) 811
BbvI GCAGC 5 cut(s) 25, 83, 709, 1098, 1122
BccI CCATC 4 cut(s) 682, 736, 784, 1111
BceAI ACGGC 1 cut(s) 1148
BciT130I CCWGG 3 cut(s) 59, 424, 444
BcoDI GTCTC 2 cut(s) 70, 110
BfaI CTAG 4 cut(s) 756, 780, 999, 1457
BfmI CTRYAG 2 cut(s) 69, 1112
BfuAI ACCTGC 2 cut(s) 182, 730
BglII AGATCT 2 cut(s) 259, 637
BisI GCNGC 6 cut(s) 39, 72, 698, 1109, 1112, 1136
BlpI GCTNAGC 1 cut(s) 693
BlsI GCNGC 6 cut(s) 40, 73, 699, 1110, 1113, 1137
Bme1390I CCNGG 3 cut(s) 59, 424, 444
Bme18I GGWCC 2 cut(s) 1026, 1339
BmgT120I GGNCC 2 cut(s) 1026, 1339
BmiI GGNNCC 7 cut(s) 421, 645, 666, 1027, 1326, 1425, 1449
BmrFI CCNGG 3 cut(s) 59, 424, 444
BmsI GCATC 2 cut(s) 577, 1279
BoxI GACNNNNGTC 1 cut(s) 1012
BpiI GAAGAC 1 cut(s) 72
BpmI CTGGAG 2 cut(s) 1343, 1421
Bpu10I CCTNAGC 2 cut(s) 811, 1452
Bpu1102I GCTNAGC 1 cut(s) 693
Bpu14I TTCGAA 1 cut(s) 680
BpuEI CTTGAG 1 cut(s) 1169
BsaI GGTCTC 1 cut(s) 70
BsaJI CCNNGG 6 cut(s) 58, 153, 831, 1029, 1332, 1342
BsaXI ACNNNNNCTCC 6 cut(s) 188, 218, 843, 873, 1423, 1453
Bsc4I CCNNNNNNNGG 1 cut(s) 832
Bse1I ACTGG 5 cut(s) 92, 608, 1326, 1364, 1404
Bse21I CCTNAGG 2 cut(s) 918, 1443
Bse3DI GCAATG 3 cut(s) 81, 1226, 1299
BseBI CCWGG 3 cut(s) 59, 424, 444
BseDI CCNNGG 6 cut(s) 58, 153, 831, 1029, 1332, 1342
BseLI CCNNNNNNNGG 1 cut(s) 832
BseMI GCAATG 3 cut(s) 81, 1226, 1299
BseMII CTCAG 6 cut(s) 285, 335, 707, 825, 1434, 1443
BseNI ACTGG 5 cut(s) 92, 608, 1326, 1364, 1404
BsePI GCGCGC 1 cut(s) 836
BseSI GKGCMC 1 cut(s) 826
BseXI GCAGC 5 cut(s) 25, 83, 709, 1098, 1122
Bsh1236I CGCG 1 cut(s) 838
BshFI GGCC 1 cut(s) 178
BshNI GGYRCC 1 cut(s) 1423
BslI CCNNNNNNNGG 1 cut(s) 832
BsmAI GTCTC 2 cut(s) 70, 110
BsnI GGCC 1 cut(s) 178
Bso31I GGTCTC 1 cut(s) 70
Bsp119I TTCGAA 1 cut(s) 680
Bsp1286I GDGCHC 2 cut(s) 826, 1329
Bsp1407I TGTACA 1 cut(s) 428
Bsp143I GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
Bsp1720I GCTNAGC 1 cut(s) 693
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 5 cut(s) 510, 828, 897, 1108, 1275
BspANI GGCC 1 cut(s) 178
BspCNI CTCAG 6 cut(s) 284, 334, 706, 824, 1435, 1444
BspFNI CGCG 1 cut(s) 838
BspHI TCATGA 2 cut(s) 286, 936
BspLI GGNNCC 7 cut(s) 421, 645, 666, 1027, 1326, 1425, 1449
BspMAI CTGCAG 2 cut(s) 73, 1116
BspMI ACCTGC 2 cut(s) 182, 730
BspPI GGATC 3 cut(s) 1355, 1442, 1455
BspT104I TTCGAA 1 cut(s) 680
BspT107I GGYRCC 1 cut(s) 1423
BspTNI GGTCTC 1 cut(s) 70
BsrDI GCAATG 3 cut(s) 81, 1226, 1299
BsrGI TGTACA 1 cut(s) 428
BsrI ACTGG 5 cut(s) 92, 608, 1326, 1364, 1404
BssECI CCNNGG 6 cut(s) 58, 153, 831, 1029, 1332, 1342
BssHII GCGCGC 1 cut(s) 836
BssMI GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
BssT1I CCWWGG 4 cut(s) 153, 831, 1332, 1342
Bst2UI CCWGG 3 cut(s) 59, 424, 444
Bst4CI ACNGT 3 cut(s) 48, 212, 416
Bst6I CTCTTC 1 cut(s) 108
BstAPI GCANNNNNTGC 2 cut(s) 14, 1423
BstAUI TGTACA 1 cut(s) 428
BstBI TTCGAA 1 cut(s) 680
BstC8I GCNNGC 7 cut(s) 10, 189, 522, 838, 842, 1299, 1494
BstDEI CTNAG 7 cut(s) 271, 321, 693, 811, 918, 1443, 1452
BstDSI CCRYGG 1 cut(s) 153
BstFNI CGCG 1 cut(s) 838
BstHHI GCGC 2 cut(s) 838, 840
BstKTI GATC 6 cut(s) 35, 262, 640, 1095, 1363, 1450
BstMAI GTCTC 2 cut(s) 70, 110
BstMBI GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
BstMWI GCNNNNNNNGC 6 cut(s) 14, 184, 821, 1144, 1298, 1423
BstNI CCWGG 3 cut(s) 59, 424, 444
BstNSI RCATGY 2 cut(s) 191, 844
BstPAI GACNNNNGTC 1 cut(s) 1012
BstSCI CCNGG 3 cut(s) 57, 422, 442
BstSFI CTRYAG 2 cut(s) 69, 1112
BstSLI GKGCMC 1 cut(s) 826
BstUI CGCG 1 cut(s) 838
BstV1I GCAGC 5 cut(s) 25, 83, 709, 1098, 1122
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 3 cut(s) 259, 637, 1447
BstYI RGATCY 3 cut(s) 259, 637, 1447
Bsu36I CCTNAGG 2 cut(s) 918, 1443
BsuRI GGCC 1 cut(s) 178
BtgI CCRYGG 1 cut(s) 153
BtsI GCAGTG 1 cut(s) 437
BtsIMutI CAGTG 5 cut(s) 217, 421, 437, 1095, 1397
BveI ACCTGC 2 cut(s) 182, 730
Cac8I GCNNGC 7 cut(s) 10, 189, 522, 838, 842, 1299, 1494
CciI TCATGA 2 cut(s) 286, 936
CfoI GCGC 2 cut(s) 838, 840
Cfr13I GGNCC 2 cut(s) 1026, 1339
Csp6I GTAC 2 cut(s) 429, 1003
CviAII CATG 8 cut(s) 154, 188, 287, 841, 863, 937, 965, 1139
CviQI GTAC 2 cut(s) 429, 1003
DdeI CTNAG 7 cut(s) 271, 321, 693, 811, 918, 1443, 1452
DpnI GATC 6 cut(s) 34, 261, 639, 1094, 1362, 1449
DpnII GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
Eco130I CCWWGG 4 cut(s) 153, 831, 1332, 1342
Eco147I AGGCCT 1 cut(s) 178
Eco24I GRGCYC 1 cut(s) 1329
Eco31I GGTCTC 1 cut(s) 70
Eco47I GGWCC 2 cut(s) 1026, 1339
Eco57I CTGAAG 5 cut(s) 546, 1041, 1119, 1265, 1407
Eco81I CCTNAGG 2 cut(s) 918, 1443
EcoO109I RGGNCCY 1 cut(s) 1026
EcoRII CCWGG 3 cut(s) 57, 422, 442
EcoT14I CCWWGG 4 cut(s) 153, 831, 1332, 1342
EcoT38I GRGCYC 1 cut(s) 1329
ErhI CCWWGG 4 cut(s) 153, 831, 1332, 1342
FaeI CATG 8 cut(s) 157, 191, 290, 844, 866, 940, 968, 1142
FatI CATG 8 cut(s) 153, 187, 286, 840, 862, 936, 964, 1138
FauI CCCGC 3 cut(s) 503, 835, 1282
Fnu4HI GCNGC 6 cut(s) 39, 72, 698, 1109, 1112, 1136
FriOI GRGCYC 1 cut(s) 1329
Fsp4HI GCNGC 6 cut(s) 39, 72, 698, 1109, 1112, 1136
FspBI CTAG 4 cut(s) 756, 780, 999, 1457
GlaI GCGC 2 cut(s) 837, 839
GluI GCNGC 6 cut(s) 39, 72, 698, 1109, 1112, 1136
GsuI CTGGAG 2 cut(s) 1343, 1421
HaeIII GGCC 1 cut(s) 178
HhaI GCGC 2 cut(s) 838, 840
Hin1II CATG 8 cut(s) 157, 191, 290, 844, 866, 940, 968, 1142
Hin6I GCGC 2 cut(s) 836, 838
HinP1I GCGC 2 cut(s) 836, 838
HincII GTYRAC 1 cut(s) 622
HindII GTYRAC 1 cut(s) 622
HindIII AAGCTT 2 cut(s) 949, 1299
HinfI GANTC 5 cut(s) 137, 249, 434, 1013, 1153
HphI GGTGA 2 cut(s) 47, 273
Hpy166II GTNNAC 6 cut(s) 51, 429, 622, 886, 1319, 1339
Hpy188I TCNGA 4 cut(s) 30, 1021, 1033, 1387
Hpy8I GTNNAC 6 cut(s) 51, 429, 622, 886, 1319, 1339
HpyAV CCTTC 7 cut(s) 107, 762, 816, 1016, 1240, 1385, 1414
HpyCH4III ACNGT 3 cut(s) 48, 212, 416
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 184, 821, 1144, 1298, 1423
HpyF3I CTNAG 7 cut(s) 271, 321, 693, 811, 918, 1443, 1452
Hsp92II CATG 8 cut(s) 157, 191, 290, 844, 866, 940, 968, 1142
HspAI GCGC 2 cut(s) 836, 838
Kzo9I GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
LmnI GCTCC 8 cut(s) 730, 754, 778, 808, 1324, 1402, 1444, 1481
Lsp1109I GCAGC 5 cut(s) 25, 83, 709, 1098, 1122
LweI GCATC 2 cut(s) 577, 1279
MaeI CTAG 4 cut(s) 756, 780, 999, 1457
MaeIII GTNAC 4 cut(s) 194, 224, 631, 796
MalI GATC 6 cut(s) 34, 261, 639, 1094, 1362, 1449
MboI GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
MflI RGATCY 3 cut(s) 259, 637, 1447
MhlI GDGCHC 2 cut(s) 826, 1329
MluCI AATT 6 cut(s) 530, 573, 682, 1040, 1169, 1261
MlyI GAGTC 2 cut(s) 131, 1022
MmeI TCCRAC 3 cut(s) 125, 231, 827
MnlI CCTC 9 cut(s) 115, 214, 294, 820, 871, 1039, 1339, 1438, 1494
MroXI GAANNNNTTC 2 cut(s) 741, 765
MseI TTAA 4 cut(s) 200, 537, 1043, 1368
MspA1I CMGCKG 2 cut(s) 38, 1277
MspR9I CCNGG 3 cut(s) 59, 424, 444
MvaI CCWGG 3 cut(s) 59, 424, 444
MvnI CGCG 1 cut(s) 838
MwoI GCNNNNNNNGC 6 cut(s) 14, 184, 821, 1144, 1298, 1423
NcoI CCATGG 1 cut(s) 153
NdeII GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
NlaIII CATG 8 cut(s) 157, 191, 290, 844, 866, 940, 968, 1142
NlaIV GGNNCC 7 cut(s) 421, 645, 666, 1027, 1326, 1425, 1449
NmuCI GTSAC 2 cut(s) 194, 224
NspI RCATGY 2 cut(s) 191, 844
NspV TTCGAA 1 cut(s) 680
PaeI GCATGC 2 cut(s) 191, 844
PagI TCATGA 2 cut(s) 286, 936
PauI GCGCGC 1 cut(s) 836
PceI AGGCCT 1 cut(s) 178
PdmI GAANNNNTTC 2 cut(s) 741, 765
PfeI GAWTC 3 cut(s) 249, 434, 1153
PkrI GCNGC 6 cut(s) 40, 73, 699, 1110, 1113, 1137
PleI GAGTC 2 cut(s) 131, 1021
PpsI GAGTC 2 cut(s) 131, 1021
PpuMI RGGWCCY 1 cut(s) 1026
PshAI GACNNNNGTC 1 cut(s) 1012
Psp5II RGGWCCY 1 cut(s) 1026
Psp6I CCWGG 3 cut(s) 57, 422, 442
PspGI CCWGG 3 cut(s) 57, 422, 442
PspN4I GGNNCC 7 cut(s) 421, 645, 666, 1027, 1326, 1425, 1449
PspPI GGNCC 2 cut(s) 1026, 1339
PspPPI RGGWCCY 1 cut(s) 1026
PstI CTGCAG 2 cut(s) 73, 1116
PsuI RGATCY 3 cut(s) 259, 637, 1447
PteI GCGCGC 1 cut(s) 836
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 2 cut(s) 430, 1004
RsaNI GTAC 2 cut(s) 429, 1003
SaqAI TTAA 4 cut(s) 200, 537, 1043, 1368
SatI GCNGC 6 cut(s) 39, 72, 698, 1109, 1112, 1136
Sau3AI GATC 6 cut(s) 32, 259, 637, 1092, 1360, 1447
Sau96I GGNCC 2 cut(s) 1026, 1339
SchI GAGTC 2 cut(s) 131, 1022
ScrFI CCNGG 3 cut(s) 59, 424, 444
SduI GDGCHC 2 cut(s) 826, 1329
SfaNI GCATC 2 cut(s) 577, 1279
SfcI CTRYAG 2 cut(s) 69, 1112
SfuI TTCGAA 1 cut(s) 680
SinI GGWCC 2 cut(s) 1026, 1339
SmlI CTYRAG 1 cut(s) 1148
SmoI CTYRAG 1 cut(s) 1148
SphI GCATGC 2 cut(s) 191, 844
Sse9I AATT 6 cut(s) 530, 573, 682, 1040, 1169, 1261
SseBI AGGCCT 1 cut(s) 178
SsiI CCGC 5 cut(s) 510, 828, 897, 1108, 1275
SspMI CTAG 4 cut(s) 756, 780, 999, 1457
StuI AGGCCT 1 cut(s) 178
StyD4I CCNGG 3 cut(s) 57, 422, 442
StyI CCWWGG 4 cut(s) 153, 831, 1332, 1342
TaaI ACNGT 3 cut(s) 48, 212, 416
TaqI TCGA 6 cut(s) 329, 477, 680, 1089, 1236, 1259
TasI AATT 6 cut(s) 530, 573, 682, 1040, 1169, 1261
TatI WGTACW 1 cut(s) 428
TauI GCSGC 1 cut(s) 1111
TfiI GAWTC 3 cut(s) 249, 434, 1153
Tru1I TTAA 4 cut(s) 200, 537, 1043, 1368
Tru9I TTAA 4 cut(s) 200, 537, 1043, 1368
TscAI CASTG 5 cut(s) 217, 421, 444, 1102, 1404
TseFI GTSAC 2 cut(s) 194, 224
TseI GCWGC 5 cut(s) 38, 71, 697, 1111, 1135
Tsp45I GTSAC 2 cut(s) 194, 224
TspDTI ATGAA 9 cut(s) 72, 225, 303, 304, 698, 879, 953, 1155, 1242
TspGWI ACGGA 1 cut(s) 1189
TspRI CASTG 5 cut(s) 217, 421, 444, 1102, 1404
VpaK11BI GGWCC 2 cut(s) 1026, 1339
XapI RAATTY 3 cut(s) 530, 682, 1261
XbaI TCTAGA 1 cut(s) 755
XceI RCATGY 2 cut(s) 191, 844
XmnI GAANNNNTTC 2 cut(s) 741, 765
XspI CTAG 4 cut(s) 756, 780, 999, 1457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.