Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0007621

Physical Location & Seq

Genomic Coordinates Forward (+)

31834231 .. 31839016

Gene Structure 4786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1189400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGTCCATCCGGAGATCGGCTGCAAATCAGCTTGCTCATATGGGGGTCCCTGCAGCAATGTCTTCATCCTTACCAGTCCTTCCAACTTCTTTGGAAGAGACACATCCCAATTTACCAGACTCCCAACAGGTTTCCATGGAAAGAGAACTTATGACAAGGCCTGTTGTGCATGCTGGTCACTTAACCTCCAACAGTGGAGTAGTTGGTCACATATTTTCATCATCGTCGGGATTTTCAACAGATCTTCACTACTCAACTCATTCACCTCATGAAAAACAGCAAAAAAACTCTCCTTTCATTTCTCAGTCTCCTCATTCGGGATTTCTTCAGTCAACAGAATCTTGTCCTTATCCCAAAGAAAACAGTGGTTCCTGGTGTACAGATCCACTGCCAGGTTTCCTTGATTTTCCTGTAAATAACCATATCGAGAATAGTCAAATAGAGAGCAGTAGTTGTAGCGGCATAATGGCTGCTGATGAATTTGCTAAGCGACATGATTGGCAGGAATGGGCAGATCAGCTAATTACTGATGACGATGCTTTAACTTCTAACTGGAATGAGCTTCTTGTTGACAACGTTACAGATCTGGAACAAAAGATGAAATACCAGGCTCCCAAACCGTCTCCAAATTTTTCGGTCCAGCAGTCCCAAGTTCATCAGCAACAACCTGCTTCATCTGGGGAAATCATTCCTGCTCCATCTAGGGAAATCATTTCTGTTACTGCTCCTTCTTCAGCTAATAGTGCCACTGCCAAGGCACGCATGCGTTGGACGCCTGAACTTCATGAGTCCTTTGTGGAGGCTGTTAACCAACTTGGCGGTAGTGAAAGAGCAACTCCTAAGGGTGTGCTAAAGCTCATGAAAGTTGAACACTTGACTATCTATCATGTGAAAAGTCACTTGCAGAAATATAGGACTGCTAGATACAGACCAGAATCATCCGAAGGCGCCTCAGAGAAGAAATTGACTCCAATTGAAGAAATGACGTCTCTTGACTTGAAAACTGGTATCGAGATCACTGAAGCTCTGCGACTGCAGATGGAAGTTCAGAAGCGACTGCATGAACAGCTTGAGATTCAAAGAAATCTGCAGTTACGAATAGAAGAACAAGGGAAGTATCTTCAAATGATGTTTGAGAAGCAATGCAAGTCAGGCATCGACACGCTGAACCCATCATCATCCAATTTGGACGACCCCTCCGCTCAGCCTTCAGATGCAACGCAAGTTTGTCTCGACAAAAGTGAACCGGAGTCTTCCAAGTTGGGCCAAGGCGAGACTCAAACTGATCCAGTTAAAGCCAACTCCACATCATCAGGTGGTTCACAGGAACCGGAAGGGAAGCAGAAGGCACCTGAAACGGAAACTGTTCCCCAGAATCCCGAGCCAGATGTCGGTGAGGCCAGTTCCCAACCTCCAAGGCGTGCCAAAATCAAAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007275 GO:0007623 GO:0008150 GO:0009267 GO:0009314 GO:0009416 GO:0009555 GO:0009605 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0016036 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048229 GO:0048511 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055063 GO:0055081 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071484 GO:0071486 GO:0071496 GO:0072505 GO:0080090 GO:0098771 GO:0104004 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_CC_LHEQLE Myb_DNA-binding

Protein Analysis

480

Amino Acids

52.88

Weight (kDa)

5.45

Isoelectric Point (pI)

70.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	254 - 305	1.4e-08	Myb-like DNA-binding domain
Myb_CC_LHEQLE	PF14379	337 - 383	4.3e-25	MYB-CC type transfactor, LHEQLE motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007621)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28610
fragaria_vesca	FvH4_2g20730 FvH4_2g20730
malus_domestica	MD00G1060900.v1.1 MD05G1189400.v1.1
prunus_persica	Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1 Prupe.8G216800_v2.0.a1
pyrus_communis	pycom05g17450 pycom10g15330
rosa_chinensis	RchiOBHm_Chr6g0286911
rosa_laevigata	RLG00000012527
rosa_multiflora	Rmu_sc0002520.1_g000011
rosa_roxburghii	Rroxscaffold_7G00181810
rosa_rugosa	Rorug06G0184800 Rorug06G0184900 Rorug06G0185000
rosa_samantha	Rh6AG296700 Rh6BG301300 Rh6CG308800 Rh6DG292600
rosa_wichuraiana	Rw6G025600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	989
Acc36I	ACCTGC	1 cut(s)	676
AccB1I	GGYRCC	2 cut(s)	947, 1348
AccBSI	CCGCTC	1 cut(s)	1202
AccIII	TCCGGA	1 cut(s)	9
AciI	CCGC	3 cut(s)	459, 819, 1200
AclI	AACGTT	1 cut(s)	576
AclWI	GGATC	2 cut(s)	377, 1280
AcsI	RAATTY	2 cut(s)	479, 628
AcuI	CTGAAG	4 cut(s)	311, 717, 1041, 1194
AcyI	GRCGYC	3 cut(s)	773, 948, 986
AfaI	GTAC	1 cut(s)	379
AfiI	CCNNNNNNNGG	4 cut(s)	16, 317, 392, 1391
AgsI	TTSAA	6 cut(s)	237, 869, 977, 1000, 1079, 1124
AjnI	CCWGG	3 cut(s)	371, 391, 606
AluBI	AGCT	7 cut(s)	31, 520, 562, 737, 856, 1025, 1069
AluI	AGCT	7 cut(s)	31, 520, 562, 737, 856, 1025, 1069
Alw26I	GTCTC	6 cut(s)	92, 312, 627, 993, 1235, 1268
AlwI	GGATC	2 cut(s)	377, 1280
Ama87I	CYCGRG	1 cut(s)	1379
Aor13HI	TCCGGA	1 cut(s)	9
AoxI	GGCC	3 cut(s)	158, 1264, 1398
ApeKI	GCWGC	3 cut(s)	20, 53, 470
ApoI	RAATTY	2 cut(s)	479, 628
Asp700I	GAANNNNTTC	2 cut(s)	687, 1365
AspLEI	GCGC	1 cut(s)	950
AspS9I	GGNCC	3 cut(s)	46, 637, 1264
AsuHPI	GGTGA	2 cut(s)	255, 1406
AvaI	CYCGRG	1 cut(s)	1379
AvaII	GGWCC	2 cut(s)	46, 637
AxyI	CCTNAGG	1 cut(s)	840
BanI	GGYRCC	2 cut(s)	947, 1348
BbsI	GAAGAC	2 cut(s)	54, 1245
BbvI	GCAGC	3 cut(s)	7, 65, 457
BccI	CCATC	4 cut(s)	14, 706, 1033, 1180
BciT130I	CCWGG	3 cut(s)	373, 393, 608
BcoDI	GTCTC	6 cut(s)	92, 312, 627, 993, 1235, 1268
BfaI	CTAG	2 cut(s)	702, 921
BfmI	CTRYAG	3 cut(s)	51, 1034, 1088
BfoI	RGCGCY	1 cut(s)	951
BfuAI	ACCTGC	1 cut(s)	676
BglII	AGATCT	2 cut(s)	241, 583
BisI	GCNGC	4 cut(s)	21, 54, 460, 471
BlpI	GCTNAGC	2 cut(s)	486, 1203
BlsI	GCNGC	4 cut(s)	22, 55, 461, 472
Bme1390I	CCNGG	3 cut(s)	373, 393, 608
Bme18I	GGWCC	2 cut(s)	46, 637
BmeT110I	CYCGRG	1 cut(s)	1379
BmgT120I	GGNCC	3 cut(s)	46, 637, 1264
BmiI	GGNNCC	7 cut(s)	47, 48, 370, 612, 949, 1329, 1350
BmrFI	CCNGG	3 cut(s)	373, 393, 608
BmsI	GCATC	3 cut(s)	526, 1164, 1204
BpiI	GAAGAC	2 cut(s)	54, 1245
Bpu1102I	GCTNAGC	2 cut(s)	486, 1203
BpuEI	CTTGAG	1 cut(s)	1091
BsaHI	GRCGYC	3 cut(s)	773, 948, 986
BsaJI	CCNNGG	4 cut(s)	135, 753, 1267, 1415
BsaWI	WCCGGW	3 cut(s)	9, 1246, 1330
BsaXI	ACNNNNNCTCC	4 cut(s)	170, 200, 1181, 1211
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 317, 392, 1391
Bse1I	ACTGG	5 cut(s)	74, 557, 1009, 1289, 1401
Bse21I	CCTNAGG	1 cut(s)	840
Bse3DI	GCAATG	2 cut(s)	63, 1148
BseAI	TCCGGA	1 cut(s)	9
BseBI	CCWGG	3 cut(s)	373, 393, 608
BseDI	CCNNGG	4 cut(s)	135, 753, 1267, 1415
BseGI	GGATG	5 cut(s)	6, 65, 103, 938, 1178
BseLI	CCNNNNNNNGG	4 cut(s)	16, 317, 392, 1391
BseMI	GCAATG	2 cut(s)	63, 1148
BseMII	CTCAG	3 cut(s)	317, 966, 1217
BseNI	ACTGG	5 cut(s)	74, 557, 1009, 1289, 1401
BseRI	GAGGAG	1 cut(s)	300
BseXI	GCAGC	3 cut(s)	7, 65, 457
BshFI	GGCC	3 cut(s)	160, 1266, 1400
BshNI	GGYRCC	2 cut(s)	947, 1348
BsiHKCI	CYCGRG	1 cut(s)	1379
BsiSI	CCGG	3 cut(s)	10, 1247, 1331
BslFI	GGGAC	2 cut(s)	32, 631
BslI	CCNNNNNNNGG	4 cut(s)	16, 317, 392, 1391
BsmAI	GTCTC	6 cut(s)	92, 312, 627, 993, 1235, 1268
BsmBI	CGTCTC	2 cut(s)	627, 993
BsmFI	GGGAC	2 cut(s)	32, 631
BsnI	GGCC	3 cut(s)	160, 1266, 1400
BsoBI	CYCGRG	1 cut(s)	1379
Bsp13I	TCCGGA	1 cut(s)	9
Bsp1407I	TGTACA	1 cut(s)	377
Bsp143I	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
Bsp1720I	GCTNAGC	2 cut(s)	486, 1203
Bsp19I	CCATGG	1 cut(s)	135
BspACI	CCGC	3 cut(s)	459, 819, 1200
BspANI	GGCC	3 cut(s)	160, 1266, 1400
BspCNI	CTCAG	3 cut(s)	316, 965, 1216
BspEI	TCCGGA	1 cut(s)	9
BspHI	TCATGA	3 cut(s)	268, 784, 858
BspLI	GGNNCC	7 cut(s)	47, 48, 370, 612, 949, 1329, 1350
BspMAI	CTGCAG	3 cut(s)	55, 1038, 1092
BspMI	ACCTGC	1 cut(s)	676
BspPI	GGATC	2 cut(s)	377, 1280
BspT107I	GGYRCC	2 cut(s)	947, 1348
BsrBI	CCGCTC	1 cut(s)	1202
BsrDI	GCAATG	2 cut(s)	63, 1148
BsrGI	TGTACA	1 cut(s)	377
BsrI	ACTGG	5 cut(s)	74, 557, 1009, 1289, 1401
BssECI	CCNNGG	4 cut(s)	135, 753, 1267, 1415
BssMI	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
BssNI	GRCGYC	3 cut(s)	773, 948, 986
BssT1I	CCWWGG	4 cut(s)	135, 753, 1267, 1415
Bst2UI	CCWGG	3 cut(s)	373, 393, 608
Bst4CI	ACNGT	4 cut(s)	194, 365, 621, 1366
Bst6I	CTCTTC	1 cut(s)	90
BstACI	GRCGYC	3 cut(s)	773, 948, 986
BstAUI	TGTACA	1 cut(s)	377
BstC8I	GCNNGC	5 cut(s)	33, 171, 760, 764, 1422
BstDEI	CTNAG	5 cut(s)	303, 486, 840, 952, 1203
BstDSI	CCRYGG	1 cut(s)	135
BstF5I	GGATG	5 cut(s)	6, 65, 103, 938, 1178
BstH2I	RGCGCY	1 cut(s)	951
BstHHI	GCGC	1 cut(s)	950
BstKTI	GATC	7 cut(s)	17, 244, 385, 517, 586, 1017, 1288
BstMAI	GTCTC	6 cut(s)	92, 312, 627, 993, 1235, 1268
BstMBI	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
BstMWI	GCNNNNNNNGC	5 cut(s)	166, 743, 772, 1066, 1152
BstNI	CCWGG	3 cut(s)	373, 393, 608
BstNSI	RCATGY	2 cut(s)	173, 766
BstSCI	CCNGG	3 cut(s)	371, 391, 606
BstSFI	CTRYAG	3 cut(s)	51, 1034, 1088
BstV1I	GCAGC	3 cut(s)	7, 65, 457
BstV2I	GAAGAC	2 cut(s)	54, 1245
BstX2I	RGATCY	3 cut(s)	241, 382, 583
BstYI	RGATCY	3 cut(s)	241, 382, 583
Bsu36I	CCTNAGG	1 cut(s)	840
BsuRI	GGCC	3 cut(s)	160, 1266, 1400
BtgI	CCRYGG	1 cut(s)	135
BtsCI	GGATG	5 cut(s)	6, 65, 103, 938, 1178
BtsI	GCAGTG	2 cut(s)	386, 747
BtsIMutI	CAGTG	5 cut(s)	199, 370, 386, 747, 1017
BveI	ACCTGC	1 cut(s)	676
Cac8I	GCNNGC	5 cut(s)	33, 171, 760, 764, 1422
CciI	TCATGA	3 cut(s)	268, 784, 858
CfoI	GCGC	1 cut(s)	950
Cfr13I	GGNCC	3 cut(s)	46, 637, 1264
CseI	GACGC	1 cut(s)	781
Csp6I	GTAC	1 cut(s)	378
CviAII	CATG	9 cut(s)	136, 170, 269, 494, 763, 785, 859, 887, 1061
CviQI	GTAC	1 cut(s)	378
DdeI	CTNAG	5 cut(s)	303, 486, 840, 952, 1203
DinI	GGCGCC	1 cut(s)	949
DpnI	GATC	7 cut(s)	16, 243, 384, 516, 585, 1016, 1287
DpnII	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
Eam1104I	CTCTTC	1 cut(s)	90
EarI	CTCTTC	1 cut(s)	90
Eco130I	CCWWGG	4 cut(s)	135, 753, 1267, 1415
Eco147I	AGGCCT	1 cut(s)	160
Eco47I	GGWCC	2 cut(s)	46, 637
Eco57I	CTGAAG	4 cut(s)	311, 717, 1041, 1194
Eco81I	CCTNAGG	1 cut(s)	840
Eco88I	CYCGRG	1 cut(s)	1379
EcoO109I	RGGNCCY	1 cut(s)	46
EcoRII	CCWGG	3 cut(s)	371, 391, 606
EcoT14I	CCWWGG	4 cut(s)	135, 753, 1267, 1415
EgeI	GGCGCC	1 cut(s)	949
EheI	GGCGCC	1 cut(s)	949
ErhI	CCWWGG	4 cut(s)	135, 753, 1267, 1415
Esp3I	CGTCTC	2 cut(s)	627, 993
FaeI	CATG	9 cut(s)	139, 173, 272, 497, 766, 788, 862, 890, 1064
FaqI	GGGAC	2 cut(s)	32, 631
FatI	CATG	9 cut(s)	135, 169, 268, 493, 762, 784, 858, 886, 1060
FauNDI	CATATG	1 cut(s)	39
Fnu4HI	GCNGC	4 cut(s)	21, 54, 460, 471
FokI	GGATG	4 cut(s)	52, 90, 925, 1165
Fsp4HI	GCNGC	4 cut(s)	21, 54, 460, 471
FspBI	CTAG	2 cut(s)	702, 921
GlaI	GCGC	1 cut(s)	949
GluI	GCNGC	4 cut(s)	21, 54, 460, 471
HaeII	RGCGCY	1 cut(s)	951
HaeIII	GGCC	3 cut(s)	160, 1266, 1400
HapII	CCGG	3 cut(s)	10, 1247, 1331
HgaI	GACGC	1 cut(s)	781
HhaI	GCGC	1 cut(s)	950
Hin1I	GRCGYC	3 cut(s)	773, 948, 986
Hin1II	CATG	9 cut(s)	139, 173, 272, 497, 766, 788, 862, 890, 1064
Hin6I	GCGC	1 cut(s)	948
HinP1I	GCGC	1 cut(s)	948
HincII	GTYRAC	3 cut(s)	333, 571, 808
HindII	GTYRAC	3 cut(s)	333, 571, 808
HinfI	GANTC	9 cut(s)	119, 338, 788, 935, 967, 1075, 1250, 1276, 1375
HpaI	GTTAAC	1 cut(s)	808
HpaII	CCGG	3 cut(s)	10, 1247, 1331
HphI	GGTGA	2 cut(s)	255, 1406
Hpy166II	GTNNAC	6 cut(s)	333, 378, 571, 808, 1244, 1322
Hpy188I	TCNGA	4 cut(s)	943, 955, 1050, 1213
Hpy8I	GTNNAC	6 cut(s)	333, 378, 571, 808, 1244, 1322
Hpy99I	CGWCG	1 cut(s)	229
HpyAV	CCTTC	6 cut(s)	89, 738, 938, 1218, 1328, 1339
HpyCH4III	ACNGT	4 cut(s)	194, 365, 621, 1366
HpyCH4IV	ACGT	2 cut(s)	576, 986
HpyCH4V	TGCA	9 cut(s)	23, 53, 169, 904, 1036, 1060, 1090, 1146, 1217
HpyF10VI	GCNNNNNNNGC	5 cut(s)	166, 743, 772, 1066, 1152
HpyF3I	CTNAG	5 cut(s)	303, 486, 840, 952, 1203
HpySE526I	ACGT	2 cut(s)	576, 986
Hsp92I	GRCGYC	3 cut(s)	773, 948, 986
Hsp92II	CATG	9 cut(s)	139, 173, 272, 497, 766, 788, 862, 890, 1064
HspAI	GCGC	1 cut(s)	948
KasI	GGCGCC	1 cut(s)	947
KflI	GGGWCCC	1 cut(s)	46
Kpn2I	TCCGGA	1 cut(s)	9
KspAI	GTTAAC	1 cut(s)	808
Kzo9I	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
LmnI	GCTCC	3 cut(s)	616, 700, 730
Lsp1109I	GCAGC	3 cut(s)	7, 65, 457
LweI	GCATC	3 cut(s)	526, 1164, 1204
MaeI	CTAG	2 cut(s)	702, 921
MaeII	ACGT	2 cut(s)	576, 986
MaeIII	GTNAC	6 cut(s)	176, 206, 577, 718, 896, 1092
MalI	GATC	7 cut(s)	16, 243, 384, 516, 585, 1016, 1287
MbiI	CCGCTC	1 cut(s)	1202
MboI	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	3 cut(s)	241, 382, 583
MluCI	AATT	7 cut(s)	109, 479, 522, 628, 962, 972, 1183
Mly113I	GGCGCC	1 cut(s)	948
MlyI	GAGTC	5 cut(s)	113, 797, 961, 1259, 1270
MmeI	TCCRAC	3 cut(s)	107, 213, 749
MnlI	CCTC	8 cut(s)	196, 276, 321, 793, 961, 1207, 1390, 1422
MroI	TCCGGA	1 cut(s)	9
MroXI	GAANNNNTTC	2 cut(s)	687, 1365
MseI	TTAA	4 cut(s)	182, 542, 807, 1293
MspI	CCGG	3 cut(s)	10, 1247, 1331
MspR9I	CCNGG	3 cut(s)	373, 393, 608
MunI	CAATTG	1 cut(s)	972
MvaI	CCWGG	3 cut(s)	373, 393, 608
MwoI	GCNNNNNNNGC	5 cut(s)	166, 743, 772, 1066, 1152
NarI	GGCGCC	1 cut(s)	948
NcoI	CCATGG	1 cut(s)	135
NdeI	CATATG	1 cut(s)	39
NdeII	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
NlaIII	CATG	9 cut(s)	139, 173, 272, 497, 766, 788, 862, 890, 1064
NlaIV	GGNNCC	7 cut(s)	47, 48, 370, 612, 949, 1329, 1350
NmuCI	GTSAC	3 cut(s)	176, 206, 896
NspI	RCATGY	2 cut(s)	173, 766
PaeI	GCATGC	2 cut(s)	173, 766
PagI	TCATGA	3 cut(s)	268, 784, 858
PceI	AGGCCT	1 cut(s)	160
PdmI	GAANNNNTTC	2 cut(s)	687, 1365
PfeI	GAWTC	4 cut(s)	338, 935, 1075, 1375
PkrI	GCNGC	4 cut(s)	22, 55, 461, 472
PleI	GAGTC	5 cut(s)	113, 796, 961, 1258, 1270
PluTI	GGCGCC	1 cut(s)	951
PpsI	GAGTC	5 cut(s)	113, 796, 961, 1258, 1270
PpuMI	RGGWCCY	1 cut(s)	46
Psp1406I	AACGTT	1 cut(s)	576
Psp5II	RGGWCCY	1 cut(s)	46
Psp6I	CCWGG	3 cut(s)	371, 391, 606
PspGI	CCWGG	3 cut(s)	371, 391, 606
PspN4I	GGNNCC	7 cut(s)	47, 48, 370, 612, 949, 1329, 1350
PspPI	GGNCC	3 cut(s)	46, 637, 1264
PspPPI	RGGWCCY	1 cut(s)	46
PstI	CTGCAG	3 cut(s)	55, 1038, 1092
PsuI	RGATCY	3 cut(s)	241, 382, 583
RsaI	GTAC	1 cut(s)	379
RsaNI	GTAC	1 cut(s)	378
SaqAI	TTAA	4 cut(s)	182, 542, 807, 1293
SatI	GCNGC	4 cut(s)	21, 54, 460, 471
Sau3AI	GATC	7 cut(s)	14, 241, 382, 514, 583, 1014, 1285
Sau96I	GGNCC	3 cut(s)	46, 637, 1264
SchI	GAGTC	5 cut(s)	113, 797, 961, 1259, 1270
ScrFI	CCNGG	3 cut(s)	373, 393, 608
SfaNI	GCATC	3 cut(s)	526, 1164, 1204
SfcI	CTRYAG	3 cut(s)	51, 1034, 1088
SfoI	GGCGCC	1 cut(s)	949
SinI	GGWCC	2 cut(s)	46, 637
SmlI	CTYRAG	1 cut(s)	1070
SmoI	CTYRAG	1 cut(s)	1070
SphI	GCATGC	2 cut(s)	173, 766
Sse9I	AATT	7 cut(s)	109, 479, 522, 628, 962, 972, 1183
SseBI	AGGCCT	1 cut(s)	160
SsiI	CCGC	3 cut(s)	459, 819, 1200
SspDI	GGCGCC	1 cut(s)	947
SspMI	CTAG	2 cut(s)	702, 921
StuI	AGGCCT	1 cut(s)	160
StyD4I	CCNGG	3 cut(s)	371, 391, 606
StyI	CCWWGG	4 cut(s)	135, 753, 1267, 1415
TaaI	ACNGT	4 cut(s)	194, 365, 621, 1366
TaiI	ACGT	2 cut(s)	579, 989
TaqI	TCGA	4 cut(s)	426, 1011, 1158, 1233
TaqII	GACCGA	1 cut(s)	625
TasI	AATT	7 cut(s)	109, 479, 522, 628, 962, 972, 1183
TatI	WGTACW	1 cut(s)	377
TauI	GCSGC	1 cut(s)	462
TfiI	GAWTC	4 cut(s)	338, 935, 1075, 1375
Tru1I	TTAA	4 cut(s)	182, 542, 807, 1293
Tru9I	TTAA	4 cut(s)	182, 542, 807, 1293
TscAI	CASTG	5 cut(s)	199, 370, 393, 754, 1024
TseFI	GTSAC	3 cut(s)	176, 206, 896
TseI	GCWGC	3 cut(s)	20, 53, 470
Tsp45I	GTSAC	3 cut(s)	176, 206, 896
TspGWI	ACGGA	1 cut(s)	1373
TspRI	CASTG	5 cut(s)	199, 370, 393, 754, 1024
VpaK11BI	GGWCC	2 cut(s)	46, 637
XapI	RAATTY	2 cut(s)	479, 628
XceI	RCATGY	2 cut(s)	173, 766
XmnI	GAANNNNTTC	2 cut(s)	687, 1365
XspI	CTAG	2 cut(s)	702, 921
ZraI	GACGTC	1 cut(s)	987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.