FvH4_2g30021

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
23270899 .. 23272453
1555 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g30021.t1

Sequence Viewer

Length: 1026 bp
ATGACGTCTACTCCTGACGAAGCCTACATTAAGCGTCTCGTTCCTCTTGATTTTGGCTCAGCCAAGTCAGTTCCAGACTCTTTCGTGTGGCCTCAAGCATCCGATGAGGTCCACTCCGGTGACGGGTTAACCATACCGGTTATCGACCTCACGGATCCGAATGCCCCGCAACTCATAACCGAGGCATGTAAGACATGGGGTATTCTCCAAGTGAAAGGACATGGAATTCCAACTAAGCTTCTGGAGGACATGGAGTCTGAGTGTGAAAGACTGTTTAGTCTCCCAACTGACCAGAAAATGAAGGCCGTGAGATCTCCAGGCAGGATTACAGGATATGGTATCGCCCATATCCAGTCCTTGTTTTCCACCACTATGTGGCATGAAGGGTTTACCATCGTCGGGTCTGCAATTGATCATGCTAGGCTGCTTTGGCCTAATGATTATCAAGGTTTTTGTGACACAATAGATGATTATCAGAAGCAGATGAAGGCCTTGGCAGAGCAACTGATGCGCATCCTCTTCAAAGCCTTGAGCATTTCTGTAGAAGAACTCAATTGGCTCGATGATCCAACTAACAGCAGTGGCTGCAGTCTGTCTTTACAGCTGAACTCTTACCCTCCATGCCCCGAACCGTCCCGGACCTTAGGTCTAGCCCCCCACACAGACACCTCCATTGTAACCATACTCCAAGCTAAAACCAGCGGTCTCCAAGTCTTCAAAGACGGAGTTGGGTGGATTCTGGTGGAACTGGAACCCGATGCACTCTTCGTGAACCTTGGTGATTTCAGTCGTATTCTATCCAATGGTCAATTCATCAGTGTTCTGCATCGTGTTGTGGTGAAACCGATCCAACGCTACTCAATGGCATACTTCTTTAGGCCTCCGACGGATTTTGTTGCGTCACCACTTTTGTCGAAGGATTTGGGTCCGGGAGAAGTTCCTCGGTATCGTTCAGTCACAGTAAAGGAGTATCTTGATCTCAAGGGGAAACATCTTGAAAATGCATTATCTTTCATTGAAAATTAA

Protein Analysis

342

Amino Acids

37.91

Weight (kDa)

5.21

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 45 - 135 1.3e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 199 - 294 4.1e-27 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 276
AatII GACGTC 1 cut(s) 8
Acc16I TGCGCA 1 cut(s) 512
AccB7I CCANNNNNTGG 1 cut(s) 375
AccI GTMKAC 1 cut(s) 8
AciI CCGC 2 cut(s) 167, 702
AclWI GGATC 4 cut(s) 149, 162, 560, 841
AcsI RAATTY 1 cut(s) 225
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 375
AfiI CCNNNNNNNGG 3 cut(s) 123, 375, 399
AgeI ACCGGT 1 cut(s) 136
AgsI TTSAA 4 cut(s) 523, 718, 998, 1019
AhdI GACNNNNNGTC 2 cut(s) 253, 645
AjnI CCWGG 1 cut(s) 316
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
AleI CACNNNNGTG 1 cut(s) 117
AluBI AGCT 3 cut(s) 238, 604, 692
AluI AGCT 3 cut(s) 238, 604, 692
Alw26I GTCTC 3 cut(s) 41, 284, 710
AlwI GGATC 4 cut(s) 149, 162, 560, 841
AlwNI CAGNNNCTG 1 cut(s) 585
AoxI GGCC 5 cut(s) 89, 303, 431, 489, 878
ApeKI GCWGC 2 cut(s) 424, 585
ApoI RAATTY 1 cut(s) 225
AsiGI ACCGGT 1 cut(s) 136
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 3 cut(s) 109, 639, 926
AsuC2I CCSGG 2 cut(s) 637, 930
AsuHPI GGTGA 4 cut(s) 131, 791, 850, 894
AvaII GGWCC 3 cut(s) 109, 639, 926
AxyI CCTNAGG 1 cut(s) 643
BamHI GGATCC 1 cut(s) 154
BbsI GAAGAC 1 cut(s) 706
BbvI GCAGC 2 cut(s) 411, 572
BccI CCATC 1 cut(s) 401
BceAI ACGGC 1 cut(s) 290
BciT130I CCWGG 1 cut(s) 318
BclI TGATCA 1 cut(s) 412
BcnI CCSGG 2 cut(s) 637, 930
BcoDI GTCTC 3 cut(s) 41, 284, 710
BfaI CTAG 2 cut(s) 420, 650
BfmI CTRYAG 2 cut(s) 540, 586
BglII AGATCT 1 cut(s) 311
BisI GCNGC 2 cut(s) 425, 586
BlpI GCTNAGC 1 cut(s) 58
BlsI GCNGC 2 cut(s) 426, 587
Bme1390I CCNGG 3 cut(s) 318, 637, 930
Bme18I GGWCC 3 cut(s) 109, 639, 926
BmeRI GACNNNNNGTC 2 cut(s) 253, 645
BmgT120I GGNCC 3 cut(s) 109, 639, 926
BmiI GGNNCC 3 cut(s) 156, 753, 927
BmrFI CCNGG 3 cut(s) 318, 637, 930
BmsI GCATC 5 cut(s) 107, 498, 522, 748, 835
BpiI GAAGAC 1 cut(s) 706
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 2 cut(s) 263, 300
Bpu1102I GCTNAGC 1 cut(s) 58
BpuEI CTTGAG 3 cut(s) 78, 550, 965
BpuMI CCSGG 2 cut(s) 637, 930
BsaBI GATNNNNATC 2 cut(s) 471, 512
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 710
BsaJI CCNNGG 4 cut(s) 180, 492, 775, 941
BsaWI WCCGGW 2 cut(s) 116, 136
BsaXI ACNNNNNCTCC 3 cut(s) 25, 245, 275
Bsc4I CCNNNNNNNGG 3 cut(s) 123, 375, 399
Bse118I RCCGGY 1 cut(s) 136
Bse1I ACTGG 2 cut(s) 352, 753
Bse21I CCTNAGG 1 cut(s) 643
Bse8I GATNNNNATC 2 cut(s) 471, 512
BseBI CCWGG 1 cut(s) 318
BseDI CCNNGG 4 cut(s) 180, 492, 775, 941
BseGI GGATG 2 cut(s) 98, 513
BseJI GATNNNNATC 2 cut(s) 471, 512
BseLI CCNNNNNNNGG 3 cut(s) 123, 375, 399
BseMII CTCAG 2 cut(s) 72, 249
BseNI ACTGG 2 cut(s) 352, 753
BseXI GCAGC 2 cut(s) 411, 572
BshFI GGCC 5 cut(s) 91, 305, 433, 491, 880
BshTI ACCGGT 1 cut(s) 136
BsiSI CCGG 4 cut(s) 117, 137, 637, 929
BslFI GGGAC 1 cut(s) 619
BslI CCNNNNNNNGG 3 cut(s) 123, 375, 399
BsmAI GTCTC 3 cut(s) 41, 284, 710
BsmBI CGTCTC 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 619
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 5 cut(s) 91, 305, 433, 491, 880
Bso31I GGTCTC 1 cut(s) 710
Bsp143I GATC 6 cut(s) 154, 311, 412, 565, 846, 976
Bsp1720I GCTNAGC 1 cut(s) 58
BspACI CCGC 2 cut(s) 167, 702
BspANI GGCC 5 cut(s) 91, 305, 433, 491, 880
BspCNI CTCAG 2 cut(s) 71, 250
BspLI GGNNCC 3 cut(s) 156, 753, 927
BspMAI CTGCAG 1 cut(s) 590
BspPI GGATC 4 cut(s) 149, 162, 560, 841
BspTNI GGTCTC 1 cut(s) 710
BsrFI RCCGGY 1 cut(s) 136
BsrI ACTGG 2 cut(s) 352, 753
BssAI RCCGGY 1 cut(s) 136
BssECI CCNNGG 4 cut(s) 180, 492, 775, 941
BssMI GATC 6 cut(s) 154, 311, 412, 565, 846, 976
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 492, 775
Bst2UI CCWGG 1 cut(s) 318
Bst4CI ACNGT 3 cut(s) 273, 633, 961
Bst6I CTCTTC 2 cut(s) 524, 770
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 508, 585
BstDEI CTNAG 4 cut(s) 58, 234, 258, 643
BstF5I GGATG 2 cut(s) 98, 513
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 6 cut(s) 157, 314, 415, 568, 849, 979
BstMAI GTCTC 3 cut(s) 41, 284, 710
BstMBI GATC 6 cut(s) 154, 311, 412, 565, 846, 976
BstMWI GCNNNNNNNGC 3 cut(s) 430, 508, 585
BstNI CCWGG 1 cut(s) 318
BstNSI RCATGY 1 cut(s) 189
BstSCI CCNGG 3 cut(s) 316, 635, 928
BstSFI CTRYAG 2 cut(s) 540, 586
BstV1I GCAGC 2 cut(s) 411, 572
BstV2I GAAGAC 1 cut(s) 706
BstX2I RGATCY 2 cut(s) 154, 311
BstYI RGATCY 2 cut(s) 154, 311
Bsu36I CCTNAGG 1 cut(s) 643
BsuRI GGCC 5 cut(s) 91, 305, 433, 491, 880
BtsCI GGATG 2 cut(s) 98, 513
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 2 cut(s) 586, 823
CaiI CAGNNNCTG 1 cut(s) 585
CfoI GCGC 1 cut(s) 513
Cfr10I RCCGGY 1 cut(s) 136
Cfr13I GGNCC 3 cut(s) 109, 639, 926
CseI GACGC 2 cut(s) 23, 888
CspAI ACCGGT 1 cut(s) 136
CviAII CATG 7 cut(s) 186, 195, 221, 250, 380, 416, 621
DdeI CTNAG 4 cut(s) 58, 234, 258, 643
DpnI GATC 6 cut(s) 156, 313, 414, 567, 848, 978
DpnII GATC 6 cut(s) 154, 311, 412, 565, 846, 976
DraIII CACNNNGTG 1 cut(s) 375
DrdI GACNNNNNNGTC 1 cut(s) 276
DriI GACNNNNNGTC 2 cut(s) 253, 645
DseDI GACNNNNNNGTC 1 cut(s) 276
Eam1104I CTCTTC 2 cut(s) 524, 770
Eam1105I GACNNNNNGTC 2 cut(s) 253, 645
EarI CTCTTC 2 cut(s) 524, 770
Eco130I CCWWGG 2 cut(s) 492, 775
Eco147I AGGCCT 2 cut(s) 491, 880
Eco31I GGTCTC 1 cut(s) 710
Eco47I GGWCC 3 cut(s) 109, 639, 926
Eco81I CCTNAGG 1 cut(s) 643
EcoRI GAATTC 1 cut(s) 225
EcoRII CCWGG 1 cut(s) 316
EcoT14I CCWWGG 2 cut(s) 492, 775
EcoT22I ATGCAT 1 cut(s) 1006
ErhI CCWWGG 2 cut(s) 492, 775
Esp3I CGTCTC 1 cut(s) 41
FaeI CATG 7 cut(s) 189, 198, 224, 253, 383, 419, 624
FaqI GGGAC 1 cut(s) 619
FatI CATG 7 cut(s) 185, 194, 220, 249, 379, 415, 620
FauI CCCGC 1 cut(s) 174
FbaI TGATCA 1 cut(s) 412
FblI GTMKAC 1 cut(s) 8
Fnu4HI GCNGC 2 cut(s) 425, 586
FokI GGATG 2 cut(s) 85, 500
Fsp4HI GCNGC 2 cut(s) 425, 586
FspAI RTGCGCAY 1 cut(s) 512
FspBI CTAG 2 cut(s) 420, 650
FspI TGCGCA 1 cut(s) 512
GlaI GCGC 1 cut(s) 512
GluI GCNGC 2 cut(s) 425, 586
GsuI CTGGAG 2 cut(s) 263, 300
HaeIII GGCC 5 cut(s) 91, 305, 433, 491, 880
HapII CCGG 4 cut(s) 117, 137, 637, 929
HgaI GACGC 2 cut(s) 23, 888
HhaI GCGC 1 cut(s) 513
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 7 cut(s) 189, 198, 224, 253, 383, 419, 624
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 1 cut(s) 129
HindII GTYRAC 1 cut(s) 129
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 3 cut(s) 77, 254, 736
HpaI GTTAAC 1 cut(s) 129
HpaII CCGG 4 cut(s) 117, 137, 637, 929
HphI GGTGA 4 cut(s) 131, 791, 850, 894
Hpy166II GTNNAC 5 cut(s) 9, 112, 129, 390, 772
Hpy188I TCNGA 5 cut(s) 103, 159, 259, 477, 885
Hpy188III TCNNGA 7 cut(s) 14, 47, 74, 242, 769, 974, 995
Hpy8I GTNNAC 5 cut(s) 9, 112, 129, 390, 772
Hpy99I CGWCG 2 cut(s) 401, 889
HpyAV CCTTC 4 cut(s) 295, 377, 481, 910
HpyCH4III ACNGT 3 cut(s) 273, 633, 961
HpyCH4IV ACGT 1 cut(s) 5
HpyCH4V TGCA 5 cut(s) 407, 588, 761, 826, 1004
HpyF10VI GCNNNNNNNGC 3 cut(s) 430, 508, 585
HpyF3I CTNAG 4 cut(s) 58, 234, 258, 643
HpySE526I ACGT 1 cut(s) 5
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 7 cut(s) 189, 198, 224, 253, 383, 419, 624
HspAI GCGC 1 cut(s) 511
Ksp22I TGATCA 1 cut(s) 412
KspAI GTTAAC 1 cut(s) 129
Kzo9I GATC 6 cut(s) 154, 311, 412, 565, 846, 976
Lsp1109I GCAGC 2 cut(s) 411, 572
LweI GCATC 5 cut(s) 107, 498, 522, 748, 835
MaeI CTAG 2 cut(s) 420, 650
MaeII ACGT 1 cut(s) 5
MaeIII GTNAC 5 cut(s) 119, 455, 676, 900, 955
MalI GATC 6 cut(s) 156, 313, 414, 567, 848, 978
MboI GATC 6 cut(s) 154, 311, 412, 565, 846, 976
MboII GAAGA 4 cut(s) 511, 557, 706, 757
MfeI CAATTG 2 cut(s) 408, 553
MflI RGATCY 2 cut(s) 154, 311
MluCI AATT 5 cut(s) 225, 408, 553, 809, 1021
MlyI GAGTC 2 cut(s) 71, 263
MmeI TCCRAC 4 cut(s) 254, 593, 874, 908
Mph1103I ATGCAT 1 cut(s) 1006
MseI TTAA 3 cut(s) 30, 128, 1024
MslI CAYNNNNRTG 2 cut(s) 117, 371
MspA1I CMGCKG 2 cut(s) 604, 702
MspI CCGG 4 cut(s) 117, 137, 637, 929
MspR9I CCNGG 3 cut(s) 318, 637, 930
MunI CAATTG 2 cut(s) 408, 553
Mva1269I GAATGC 1 cut(s) 166
MvaI CCWGG 1 cut(s) 318
MwoI GCNNNNNNNGC 3 cut(s) 430, 508, 585
NciI CCSGG 2 cut(s) 637, 930
NdeII GATC 6 cut(s) 154, 311, 412, 565, 846, 976
NlaIII CATG 7 cut(s) 189, 198, 224, 253, 383, 419, 624
NlaIV GGNNCC 3 cut(s) 156, 753, 927
NmuCI GTSAC 4 cut(s) 119, 455, 900, 955
NsbI TGCGCA 1 cut(s) 512
NsiI ATGCAT 1 cut(s) 1006
NspI RCATGY 1 cut(s) 189
OliI CACNNNNGTG 1 cut(s) 117
PceI AGGCCT 2 cut(s) 491, 880
PctI GAATGC 1 cut(s) 166
PfeI GAWTC 1 cut(s) 736
PflMI CCANNNNNTGG 1 cut(s) 375
PfoI TCCNGGA 2 cut(s) 635, 928
PinAI ACCGGT 1 cut(s) 136
PkrI GCNGC 2 cut(s) 426, 587
PleI GAGTC 2 cut(s) 71, 262
PpsI GAGTC 2 cut(s) 71, 262
Psp6I CCWGG 1 cut(s) 316
PspGI CCWGG 1 cut(s) 316
PspN4I GGNNCC 3 cut(s) 156, 753, 927
PspPI GGNCC 3 cut(s) 109, 639, 926
PstI CTGCAG 1 cut(s) 590
PstNI CAGNNNCTG 1 cut(s) 585
PsuI RGATCY 2 cut(s) 154, 311
PvuII CAGCTG 1 cut(s) 604
RseI CAYNNNNRTG 2 cut(s) 117, 371
SaqAI TTAA 3 cut(s) 30, 128, 1024
SatI GCNGC 2 cut(s) 425, 586
Sau3AI GATC 6 cut(s) 154, 311, 412, 565, 846, 976
Sau96I GGNCC 3 cut(s) 109, 639, 926
SchI GAGTC 2 cut(s) 71, 263
ScrFI CCNGG 3 cut(s) 318, 637, 930
SfaNI GCATC 5 cut(s) 107, 498, 522, 748, 835
SfcI CTRYAG 2 cut(s) 540, 586
SinI GGWCC 3 cut(s) 109, 639, 926
SmiMI CAYNNNNRTG 2 cut(s) 117, 371
SmlI CTYRAG 3 cut(s) 93, 529, 980
SmoI CTYRAG 3 cut(s) 93, 529, 980
Sse9I AATT 5 cut(s) 225, 408, 553, 809, 1021
SseBI AGGCCT 2 cut(s) 491, 880
SsiI CCGC 2 cut(s) 167, 702
SspMI CTAG 2 cut(s) 420, 650
StuI AGGCCT 2 cut(s) 491, 880
StyD4I CCNGG 3 cut(s) 316, 635, 928
StyI CCWWGG 2 cut(s) 492, 775
TaaI ACNGT 3 cut(s) 273, 633, 961
TaiI ACGT 1 cut(s) 8
TaqI TCGA 3 cut(s) 144, 561, 914
TasI AATT 5 cut(s) 225, 408, 553, 809, 1021
TfiI GAWTC 1 cut(s) 736
Tru1I TTAA 3 cut(s) 30, 128, 1024
Tru9I TTAA 3 cut(s) 30, 128, 1024
TscAI CASTG 2 cut(s) 586, 823
TseFI GTSAC 4 cut(s) 119, 455, 900, 955
TseI GCWGC 2 cut(s) 424, 585
Tsp45I GTSAC 4 cut(s) 119, 455, 900, 955
TspDTI ATGAA 5 cut(s) 314, 396, 500, 802, 1003
TspGWI ACGGA 3 cut(s) 167, 738, 902
TspRI CASTG 2 cut(s) 586, 823
Van91I CCANNNNNTGG 1 cut(s) 375
VpaK11BI GGWCC 3 cut(s) 109, 639, 926
XapI RAATTY 1 cut(s) 225
XceI RCATGY 1 cut(s) 189
XmiI GTMKAC 1 cut(s) 8
XspI CTAG 2 cut(s) 420, 650
ZraI GACGTC 1 cut(s) 6
Zsp2I ATGCAT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.