RLG00000010350

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
860975 .. 862485
1511 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010350

Sequence Viewer

Length: 1020 bp
ATGGCTGCTCCTGAGGAAGCCTACATGCATATCATCCCCCTTGATTTTGGCTCAGCCAAGTCAGTTCCAGATTCCTTCGTGTGGCCCCAAGCATCCGATGAGGTCCACTCCAGCAACGGGTTAACCATACCCGTTATTGACCTCACAGATCTGAATGCCCCGCAACTCATAACGGAGGCATGTCAGACATGGGGTATTCTCCAATTGAAAGGACATGGAATTCCAACTAAGCTTATGGAGGACATGGAGTCTGAGTGTGAAAGATTGTTTAGTCTCCCAACTCACCAAAAAATGAAGGCCTTAAGATCTCCAGGCGGGAGTACAGGATACGGTATCGTCCCGATGCAGTCCTTGTTTTCCACCACCATGTGGCACGAAGGGCTTACCATCATGGGGTCTGCAATTGATCATGCTAGGCTGCTTTGGCCTAGTGATTATCAAGGATTTTGTGATAAAATAGGTGATTATCAGAAGCAAATGAAGGCCTTGGCGGAGAAGCTGATGCGCATCCTCTTCAAAGCTATGAGCATTCCTGTAAAAGAAGTCAACTGGTTTGATGATCCAACAAACAGTAGCGGCTGCAATCTGGCTTTACAGCTGAATTCTTACCCTCCATGCCCTGACCCAACCCGAACCTTGGGCCTTGCACCACACACTGACACTTCCATAGTAACCCTACTCCAAGCTAAAACCAGCGGCCTCCAAGTCTTCAAAGACGGAGTTGGGTGGGTTGCGGTGAAACCCTTACCCGATGCCCTCATTGTACACCTTGGTGATTTCACCCGCATTCTATCCAATGGTCGATTCATCAGTGTTCTTCATCGTGTGGTGGTGAAACCGATCCAACGCTACTCAGTTGGATACTTCTTTAGGCCGCCAATGGATTTTGCTGTGTCACCACTTCTGTCAAAGGATTTAGGTCCGGAACAAGTTCCGCGGTATCGTTCAGTCACAGTAAAGGAGTATCTTGATCTGAAGGCCAAGCATCTTGAGAAAGCATTTTCTCTTATCGAAAATTAG

Protein Analysis

340

Amino Acids

37.68

Weight (kDa)

6.36

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 43 - 133 2.9e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 195 - 292 1.1e-28 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 506
AccB7I CCANNNNNTGG 1 cut(s) 369
AccII CGCG 1 cut(s) 937
AccIII TCCGGA 1 cut(s) 922
AclWI GGATC 2 cut(s) 554, 835
AcsI RAATTY 2 cut(s) 219, 601
AcuI CTGAAG 1 cut(s) 995
AdeI CACNNNGTG 1 cut(s) 369
AfaI GTAC 2 cut(s) 322, 765
AfiI CCNNNNNNNGG 5 cut(s) 81, 117, 369, 393, 637
AflII CTTAAG 1 cut(s) 301
AgsI TTSAA 3 cut(s) 208, 517, 712
AhdI GACNNNNNGTC 1 cut(s) 247
AjnI CCWGG 1 cut(s) 310
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
AleI CACNNNNGTG 1 cut(s) 771
AluBI AGCT 5 cut(s) 232, 499, 521, 598, 686
AluI AGCT 5 cut(s) 232, 499, 521, 598, 686
Alw26I GTCTC 1 cut(s) 278
AlwI GGATC 2 cut(s) 554, 835
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 8 cut(s) 83, 297, 425, 483, 640, 697, 872, 978
ApeKI GCWGC 3 cut(s) 5, 418, 579
ApoI RAATTY 2 cut(s) 219, 601
Asp700I GAANNNNTTC 1 cut(s) 930
AspLEI GCGC 1 cut(s) 507
AspS9I GGNCC 4 cut(s) 84, 103, 640, 920
AsuHPI GGTGA 7 cut(s) 275, 473, 748, 772, 785, 844, 888
AvaII GGWCC 2 cut(s) 103, 920
AxyI CCTNAGG 1 cut(s) 12
BbsI GAAGAC 1 cut(s) 700
BbvI GCAGC 2 cut(s) 405, 566
BccI CCATC 1 cut(s) 395
BciT130I CCWGG 1 cut(s) 312
BciVI GTATCC 2 cut(s) 320, 854
BclI TGATCA 1 cut(s) 406
BcoDI GTCTC 1 cut(s) 278
BfaI CTAG 2 cut(s) 414, 429
BfrI CTTAAG 1 cut(s) 301
BfuI GTATCC 2 cut(s) 320, 854
BglII AGATCT 2 cut(s) 148, 305
BisI GCNGC 6 cut(s) 6, 419, 577, 580, 697, 875
BlpI GCTNAGC 1 cut(s) 52
BlsI GCNGC 6 cut(s) 7, 420, 578, 581, 698, 876
Bme1390I CCNGG 1 cut(s) 312
Bme18I GGWCC 2 cut(s) 103, 920
BmeRI GACNNNNNGTC 1 cut(s) 247
BmgT120I GGNCC 4 cut(s) 84, 103, 640, 920
BmiI GGNNCC 1 cut(s) 86
BmrFI CCNGG 1 cut(s) 312
BmsI GCATC 6 cut(s) 101, 333, 492, 516, 742, 994
BpiI GAAGAC 1 cut(s) 700
BplI GAGNNNNNCTC 2 cut(s) 92, 124
BpmI CTGGAG 2 cut(s) 94, 294
Bpu1102I GCTNAGC 1 cut(s) 52
BpuEI CTTGAG 1 cut(s) 1010
BsaBI GATNNNNATC 1 cut(s) 506
BsaJI CCNNGG 4 cut(s) 486, 636, 769, 935
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bsc4I CCNNNNNNNGG 5 cut(s) 81, 117, 369, 393, 637
Bse1I ACTGG 1 cut(s) 554
Bse21I CCTNAGG 1 cut(s) 12
Bse8I GATNNNNATC 1 cut(s) 506
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 1 cut(s) 312
BseDI CCNNGG 4 cut(s) 486, 636, 769, 935
BseGI GGATG 3 cut(s) 33, 92, 507
BseJI GATNNNNATC 1 cut(s) 506
BseLI CCNNNNNNNGG 5 cut(s) 81, 117, 369, 393, 637
BseMII CTCAG 3 cut(s) 66, 243, 867
BseNI ACTGG 1 cut(s) 554
BseXI GCAGC 2 cut(s) 405, 566
Bsh1236I CGCG 1 cut(s) 937
BshFI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 5 cut(s) 81, 117, 369, 393, 637
BsmAI GTCTC 1 cut(s) 278
BsmFI GGGAC 1 cut(s) 323
BsmI GAATGC 3 cut(s) 160, 528, 786
BsnI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
Bsp13I TCCGGA 1 cut(s) 922
Bsp1407I TGTACA 1 cut(s) 763
Bsp143I GATC 6 cut(s) 148, 305, 406, 559, 840, 970
Bsp1720I GCTNAGC 1 cut(s) 52
BspANI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BspCNI CTCAG 4 cut(s) 4, 65, 244, 866
BspEI TCCGGA 1 cut(s) 922
BspFNI CGCG 1 cut(s) 937
BspLI GGNNCC 1 cut(s) 86
BspPI GGATC 2 cut(s) 554, 835
BspTI CTTAAG 1 cut(s) 301
BsrGI TGTACA 1 cut(s) 763
BsrI ACTGG 1 cut(s) 554
BssECI CCNNGG 4 cut(s) 486, 636, 769, 935
BssMI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
BssT1I CCWWGG 3 cut(s) 486, 636, 769
Bst2UI CCWGG 1 cut(s) 312
Bst4CI ACNGT 3 cut(s) 332, 572, 955
Bst6I CTCTTC 1 cut(s) 518
BstAFI CTTAAG 1 cut(s) 301
BstAUI TGTACA 1 cut(s) 763
BstDEI CTNAG 5 cut(s) 12, 52, 228, 252, 853
BstDSI CCRYGG 1 cut(s) 935
BstF5I GGATG 3 cut(s) 33, 92, 507
BstFNI CGCG 1 cut(s) 937
BstHHI GCGC 1 cut(s) 507
BstKTI GATC 6 cut(s) 151, 308, 409, 562, 843, 973
BstMAI GTCTC 1 cut(s) 278
BstMBI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
BstMWI GCNNNNNNNGC 2 cut(s) 379, 424
BstNI CCWGG 1 cut(s) 312
BstNSI RCATGY 2 cut(s) 28, 183
BstSCI CCNGG 1 cut(s) 310
BstUI CGCG 1 cut(s) 937
BstV1I GCAGC 2 cut(s) 405, 566
BstV2I GAAGAC 1 cut(s) 700
BstX2I RGATCY 2 cut(s) 148, 305
BstYI RGATCY 2 cut(s) 148, 305
Bsu36I CCTNAGG 1 cut(s) 12
BsuI GTATCC 2 cut(s) 320, 854
BsuRI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BtgI CCRYGG 1 cut(s) 935
BtsCI GGATG 3 cut(s) 33, 92, 507
BtsIMutI CAGTG 2 cut(s) 654, 817
CfoI GCGC 1 cut(s) 507
Cfr13I GGNCC 4 cut(s) 84, 103, 640, 920
Cfr42I CCGCGG 1 cut(s) 938
Csp6I GTAC 2 cut(s) 321, 764
CviAII CATG 9 cut(s) 25, 180, 189, 215, 244, 367, 391, 410, 615
CviQI GTAC 2 cut(s) 321, 764
DdeI CTNAG 5 cut(s) 12, 52, 228, 252, 853
DpnI GATC 6 cut(s) 150, 307, 408, 561, 842, 972
DpnII GATC 6 cut(s) 148, 305, 406, 559, 840, 970
DraIII CACNNNGTG 1 cut(s) 369
DriI GACNNNNNGTC 1 cut(s) 247
Eam1104I CTCTTC 1 cut(s) 518
Eam1105I GACNNNNNGTC 1 cut(s) 247
EarI CTCTTC 1 cut(s) 518
EciI GGCGGA 1 cut(s) 506
Eco130I CCWWGG 3 cut(s) 486, 636, 769
Eco147I AGGCCT 2 cut(s) 299, 485
Eco47I GGWCC 2 cut(s) 103, 920
Eco57I CTGAAG 1 cut(s) 995
Eco81I CCTNAGG 1 cut(s) 12
EcoRI GAATTC 2 cut(s) 219, 601
EcoRII CCWGG 1 cut(s) 310
EcoT14I CCWWGG 3 cut(s) 486, 636, 769
EcoT22I ATGCAT 1 cut(s) 30
ErhI CCWWGG 3 cut(s) 486, 636, 769
FaeI CATG 9 cut(s) 28, 183, 192, 218, 247, 370, 394, 413, 618
FaqI GGGAC 1 cut(s) 323
FatI CATG 9 cut(s) 24, 179, 188, 214, 243, 366, 390, 409, 614
FauI CCCGC 3 cut(s) 168, 308, 791
FbaI TGATCA 1 cut(s) 406
Fnu4HI GCNGC 6 cut(s) 6, 419, 577, 580, 697, 875
FokI GGATG 3 cut(s) 20, 79, 494
Fsp4HI GCNGC 6 cut(s) 6, 419, 577, 580, 697, 875
FspAI RTGCGCAY 1 cut(s) 506
FspBI CTAG 2 cut(s) 414, 429
FspI TGCGCA 1 cut(s) 506
GlaI GCGC 1 cut(s) 506
GluI GCNGC 6 cut(s) 6, 419, 577, 580, 697, 875
GsuI CTGGAG 2 cut(s) 94, 294
HaeIII GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
HapII CCGG 1 cut(s) 923
HhaI GCGC 1 cut(s) 507
Hin1II CATG 9 cut(s) 28, 183, 192, 218, 247, 370, 394, 413, 618
Hin6I GCGC 1 cut(s) 505
HinP1I GCGC 1 cut(s) 505
HincII GTYRAC 2 cut(s) 123, 547
HindII GTYRAC 2 cut(s) 123, 547
HindIII AAGCTT 1 cut(s) 230
HinfI GANTC 3 cut(s) 71, 248, 804
HpaI GTTAAC 1 cut(s) 123
HpaII CCGG 1 cut(s) 923
HphI GGTGA 7 cut(s) 275, 473, 748, 772, 785, 844, 888
Hpy166II GTNNAC 4 cut(s) 106, 123, 547, 766
Hpy188I TCNGA 6 cut(s) 97, 153, 186, 253, 471, 975
Hpy188III TCNNGA 6 cut(s) 11, 68, 340, 923, 968, 989
Hpy8I GTNNAC 4 cut(s) 106, 123, 547, 766
HpyAV CCTTC 5 cut(s) 85, 289, 371, 475, 970
HpyCH4III ACNGT 3 cut(s) 332, 572, 955
HpyCH4V TGCA 5 cut(s) 28, 346, 401, 582, 647
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 424
HpyF3I CTNAG 5 cut(s) 12, 52, 228, 252, 853
Hsp92II CATG 9 cut(s) 28, 183, 192, 218, 247, 370, 394, 413, 618
HspAI GCGC 1 cut(s) 505
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 1 cut(s) 406
KspAI GTTAAC 1 cut(s) 123
KspI CCGCGG 1 cut(s) 938
Kzo9I GATC 6 cut(s) 148, 305, 406, 559, 840, 970
LmnI GCTCC 1 cut(s) 13
Lsp1109I GCAGC 2 cut(s) 405, 566
LweI GCATC 6 cut(s) 101, 333, 492, 516, 742, 994
MaeI CTAG 2 cut(s) 414, 429
MaeIII GTNAC 3 cut(s) 670, 894, 949
MalI GATC 6 cut(s) 150, 307, 408, 561, 842, 972
MboI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
MboII GAAGA 3 cut(s) 505, 700, 809
MfeI CAATTG 2 cut(s) 203, 402
MflI RGATCY 2 cut(s) 148, 305
MluCI AATT 5 cut(s) 203, 219, 402, 601, 1015
MlyI GAGTC 1 cut(s) 257
MmeI TCCRAC 4 cut(s) 248, 587, 838, 868
MnlI CCTC 9 cut(s) 7, 94, 152, 169, 232, 521, 621, 710, 767
Mph1103I ATGCAT 1 cut(s) 30
MroI TCCGGA 1 cut(s) 922
MroXI GAANNNNTTC 1 cut(s) 930
MseI TTAA 2 cut(s) 122, 302
MslI CAYNNNNRTG 2 cut(s) 365, 771
MspA1I CMGCKG 3 cut(s) 598, 696, 937
MspCI CTTAAG 1 cut(s) 301
MspI CCGG 1 cut(s) 923
MspR9I CCNGG 1 cut(s) 312
MunI CAATTG 2 cut(s) 203, 402
Mva1269I GAATGC 3 cut(s) 160, 528, 786
MvaI CCWGG 1 cut(s) 312
MvnI CGCG 1 cut(s) 937
MwoI GCNNNNNNNGC 2 cut(s) 379, 424
NdeII GATC 6 cut(s) 148, 305, 406, 559, 840, 970
NlaIII CATG 9 cut(s) 28, 183, 192, 218, 247, 370, 394, 413, 618
NlaIV GGNNCC 1 cut(s) 86
NmuCI GTSAC 2 cut(s) 894, 949
NsbI TGCGCA 1 cut(s) 506
NsiI ATGCAT 1 cut(s) 30
NspI RCATGY 2 cut(s) 28, 183
OliI CACNNNNGTG 1 cut(s) 771
PceI AGGCCT 2 cut(s) 299, 485
PctI GAATGC 3 cut(s) 160, 528, 786
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 2 cut(s) 71, 804
PflMI CCANNNNNTGG 1 cut(s) 369
PkrI GCNGC 6 cut(s) 7, 420, 578, 581, 698, 876
PleI GAGTC 1 cut(s) 256
PpsI GAGTC 1 cut(s) 256
Psp6I CCWGG 1 cut(s) 310
PspGI CCWGG 1 cut(s) 310
PspN4I GGNNCC 1 cut(s) 86
PspPI GGNCC 4 cut(s) 84, 103, 640, 920
PsuI RGATCY 2 cut(s) 148, 305
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 2 cut(s) 322, 765
RsaNI GTAC 2 cut(s) 321, 764
RseI CAYNNNNRTG 2 cut(s) 365, 771
SacII CCGCGG 1 cut(s) 938
SaqAI TTAA 2 cut(s) 122, 302
SatI GCNGC 6 cut(s) 6, 419, 577, 580, 697, 875
Sau3AI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
Sau96I GGNCC 4 cut(s) 84, 103, 640, 920
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 1 cut(s) 312
SfaNI GCATC 6 cut(s) 101, 333, 492, 516, 742, 994
Sfr303I CCGCGG 1 cut(s) 938
SgrBI CCGCGG 1 cut(s) 938
SinI GGWCC 2 cut(s) 103, 920
SmiMI CAYNNNNRTG 2 cut(s) 365, 771
SmlI CTYRAG 2 cut(s) 301, 989
SmoI CTYRAG 2 cut(s) 301, 989
Sse9I AATT 5 cut(s) 203, 219, 402, 601, 1015
SseBI AGGCCT 2 cut(s) 299, 485
SspMI CTAG 2 cut(s) 414, 429
StuI AGGCCT 2 cut(s) 299, 485
StyD4I CCNGG 1 cut(s) 310
StyI CCWWGG 3 cut(s) 486, 636, 769
TaaI ACNGT 3 cut(s) 332, 572, 955
TaqI TCGA 2 cut(s) 802, 1011
TasI AATT 5 cut(s) 203, 219, 402, 601, 1015
TatI WGTACW 2 cut(s) 320, 763
TauI GCSGC 3 cut(s) 579, 699, 877
TfiI GAWTC 2 cut(s) 71, 804
Tru1I TTAA 2 cut(s) 122, 302
Tru9I TTAA 2 cut(s) 122, 302
TscAI CASTG 2 cut(s) 661, 817
TseFI GTSAC 2 cut(s) 894, 949
TseI GCWGC 3 cut(s) 5, 418, 579
Tsp45I GTSAC 2 cut(s) 894, 949
TspDTI ATGAA 4 cut(s) 308, 494, 796, 809
TspGWI ACGGA 2 cut(s) 188, 732
TspRI CASTG 2 cut(s) 661, 817
Van91I CCANNNNNTGG 1 cut(s) 369
Vha464I CTTAAG 1 cut(s) 301
VpaK11BI GGWCC 2 cut(s) 103, 920
XapI RAATTY 2 cut(s) 219, 601
XceI RCATGY 2 cut(s) 28, 183
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 2 cut(s) 414, 429
Zsp2I ATGCAT 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.