Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002540

Physical Location & Seq

Genomic Coordinates Reverse (-)

268119 .. 270352

Gene Structure 2234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00156400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGGTGCTCTACAAGACTCCTCCAGAAATCACATCATCCCCCTTGACTTCGCTTCAGTCCAAACAGTGCCTGAATCCCATGTATGGTCGGAATCCGATGATGAATACCGGTGTCCTCCCGGCGTCCGCTCCGGTACAGCTGACCCATATTTATCCGTACCCGTCATCGATCTCTGGGATCCGAATGCCCGGGAGCTCATTTTCGAGGCATGTGAGAAATGGGGTGTTTTTCAGTTGACGGGTCATGGCATTCCGGCAAAGCTTATGGAGGAGGTGGAGTCTAAGACTCAAAGGTTATTTTCTCTCCCCGTTGACCAGAAATTGAAGGTCTTAAGATCCCCGGGTGGCGGCACCGGATACGGCCGGGCTGTGATCTCGCCGTTCTTCCCGAAGCATATGTGGCACGAGGGGTTTACTATCAGGGGTCCTGCAGCAGATCATGCCAAGCAGCTTTGGCCCCATGATTTTGAAGAGTTTTGTGAGACAATGGATGATTATCAGAAGCAAATGAAGGCACTAATCGAGCAACTAATCCACATTATCTTGAAGTCCTTGAACATTAATCCCCAACAATTGAATTGGCTTAAGAGTCACTGCTCTGGTCACGAAACTAGTACAACTCCCGGCACTGCTTTGCAGCTAAATTCTTACCCTCCCTGCCCCAACCCTAACCGAACCATGGGTCTAGCACAACATACGGACACTTCCCTCATAACCATACTCCAAGCTCAGACCAGCGGCCTTCAAATCTTCCGGGACGATGTGGGATGGATTTCAGTGCAACCCGTACGCGGTGCACTCACCGTTAATATTGGTGACTTCCTCCACGTTCTATCCAACGGCCGAATTGTTAGCGTTCTTCATCGTGTGGTGGTGAACCCGGTCCAACGATTCTCAGTGGCCTACTTCTATGCTCCGCCTGCAGATTTTGTTGTCTCGCCTCTTCTCTCCAAGGCTTTGGGTGATTCGGGACAAGGCACCGTTGCACGGTATCGCACTGTTACCGCCAAGGAGTTTATTGATATGAAGGGCAAGCATCTTGACCGAGCTCTTTCCATGATTAAAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009987 GO:0010033 GO:0010114 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01110 map00904 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

356

Amino Acids

39.65

Weight (kDa)

6.53

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	53 - 154	1.7e-19	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	211 - 306	2.1e-28	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g30020 FvH4_2g30021 FvH4_2g30040
malus_domestica	MD08G1138400.v1.1 MD15G1116300.v1.1
prunus_persica	Prupe.1G467600_v2.0.a1 Prupe.1G467600_v2.0.a1 Prupe.1G467800_v2.0.a1
pyrus_communis	pycom08g11660 pycom15g10480
rosa_chinensis	RchiOBHm_Chr1g0337611 RchiOBHm_Chr6g0312151 RchiOBHm_Chr6g0312861
rosa_laevigata	RLG00000010291 RLG00000010350 RLG00000029265
rosa_multiflora	Rmu_co8006886.1_g000001 Rmu_co8436821.1_g000001 Rmu_sc0001215.1_g000020 Rmu_sc0008049.1_g000012
rosa_roxburghii	Rroxscaffold_4G00314130 Rroxscaffold_7G00156400 Rroxscaffold_7G00157010
rosa_rugosa	Rorug01G0136200.1 Rorug06G0393100 Rorug06G0400200
rosa_samantha	Rh1BG124500 Rh1CG145700 Rh1DG163600 Rh6AG510200 Rh6AG517400 Rh6BG521000 Rh6BG528900 Rh6CG527000 Rh6CG533500 Rh6DG512400 Rh6DG520000 Rh6DG520100
rosa_wichuraiana	Rw1G012780 Rw6G044380 Rw6G044950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	350, 977
AccBSI	CCGCTC	1 cut(s)	129
AccII	CGCG	1 cut(s)	792
AciI	CCGC	6 cut(s)	127, 348, 738, 792, 917, 1005
AclWI	GGATC	3 cut(s)	173, 186, 330
AcoI	YGGCCR	2 cut(s)	361, 841
AcsI	RAATTY	1 cut(s)	643
AcuI	CTGAAG	1 cut(s)	39
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	4 cut(s)	136, 159, 616, 789
AfiI	CCNNNNNNNGG	5 cut(s)	84, 347, 679, 791, 987
AflII	CTTAAG	2 cut(s)	331, 584
AgeI	ACCGGT	1 cut(s)	108
AgsI	TTSAA	6 cut(s)	325, 470, 547, 556, 577, 746
AhlI	ACTAGT	1 cut(s)	611
AluBI	AGCT	7 cut(s)	140, 196, 262, 451, 640, 728, 1049
AluI	AGCT	7 cut(s)	140, 196, 262, 451, 640, 728, 1049
Alw21I	GWGCWC	4 cut(s)	10, 198, 799, 1051
Alw26I	GTCTC	2 cut(s)	476, 940
Alw44I	GTGCAC	1 cut(s)	795
AlwI	GGATC	3 cut(s)	173, 186, 330
AlwNI	CAGNNNCTG	1 cut(s)	71
Ama87I	CYCGRG	2 cut(s)	189, 340
AoxI	GGCC	5 cut(s)	361, 455, 739, 841, 900
ApaLI	GTGCAC	1 cut(s)	795
ApeKI	GCWGC	3 cut(s)	431, 448, 637
ApoI	RAATTY	1 cut(s)	643
ArsI	GACNNNNNNTTYG	2 cut(s)	667, 699
AseI	ATTAAT	1 cut(s)	561
AsiGI	ACCGGT	1 cut(s)	108
AspS9I	GGNCC	3 cut(s)	425, 456, 883
AsuC2I	CCSGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
AsuHPI	GGTGA	4 cut(s)	793, 827, 886, 974
AvaI	CYCGRG	2 cut(s)	189, 340
AvaII	GGWCC	2 cut(s)	425, 883
BaeGI	GKGCMC	1 cut(s)	799
BamHI	GGATCC	1 cut(s)	178
BanI	GGYRCC	2 cut(s)	350, 977
BanII	GRGCYC	2 cut(s)	198, 1051
BauI	CACGAG	1 cut(s)	404
Bbv12I	GWGCWC	4 cut(s)	10, 198, 799, 1051
BbvI	GCAGC	3 cut(s)	443, 460, 649
BccI	CCATC	1 cut(s)	762
BceAI	ACGGC	3 cut(s)	364, 376, 856
BciVI	GTATCC	1 cut(s)	350
BcnI	CCSGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
BcoDI	GTCTC	2 cut(s)	476, 940
BcuI	ACTAGT	1 cut(s)	611
BfaI	CTAG	2 cut(s)	612, 686
BfmI	CTRYAG	2 cut(s)	429, 921
BfrI	CTTAAG	2 cut(s)	331, 584
BfuI	GTATCC	1 cut(s)	350
BisI	GCNGC	5 cut(s)	349, 432, 449, 638, 739
BlsI	GCNGC	5 cut(s)	350, 433, 450, 639, 740
Bme1390I	CCNGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
Bme18I	GGWCC	2 cut(s)	425, 883
BmeT110I	CYCGRG	2 cut(s)	189, 340
BmgT120I	GGNCC	3 cut(s)	425, 456, 883
BmiI	GGNNCC	5 cut(s)	180, 352, 426, 458, 979
BmrFI	CCNGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
BmsI	GCATC	1 cut(s)	1045
BpmI	CTGGAG	1 cut(s)	7
BpuMI	CCSGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
Bsa29I	ATCGAT	1 cut(s)	168
BsaBI	GATNNNNATC	1 cut(s)	495
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	6 cut(s)	189, 339, 340, 678, 951, 1008
BsaWI	WCCGGW	3 cut(s)	108, 131, 353
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	5 cut(s)	84, 347, 679, 791, 987
Bse118I	RCCGGY	1 cut(s)	108
Bse8I	GATNNNNATC	1 cut(s)	495
BseCI	ATCGAT	1 cut(s)	168
BseDI	CCNNGG	6 cut(s)	189, 339, 340, 678, 951, 1008
BseGI	GGATG	3 cut(s)	36, 496, 773
BseJI	GATNNNNATC	1 cut(s)	495
BseLI	CCNNNNNNNGG	5 cut(s)	84, 347, 679, 791, 987
BseMII	CTCAG	2 cut(s)	743, 909
BseRI	GAGGAG	2 cut(s)	10, 284
BseSI	GKGCMC	1 cut(s)	799
BseX3I	CGGCCG	2 cut(s)	361, 841
BseXI	GCAGC	3 cut(s)	443, 460, 649
Bsh1236I	CGCG	1 cut(s)	792
Bsh1285I	CGRYCG	2 cut(s)	364, 844
BshFI	GGCC	5 cut(s)	363, 457, 741, 843, 902
BshNI	GGYRCC	2 cut(s)	350, 977
BshTI	ACCGGT	1 cut(s)	108
BshVI	ATCGAT	1 cut(s)	168
BsiEI	CGRYCG	2 cut(s)	364, 844
BsiHKAI	GWGCWC	4 cut(s)	10, 198, 799, 1051
BsiHKCI	CYCGRG	2 cut(s)	189, 340
BsiWI	CGTACG	1 cut(s)	787
BslFI	GGGAC	2 cut(s)	770, 984
BslI	CCNNNNNNNGG	5 cut(s)	84, 347, 679, 791, 987
BsmAI	GTCTC	2 cut(s)	476, 940
BsmFI	GGGAC	2 cut(s)	770, 984
BsmI	GAATGC	2 cut(s)	190, 249
BsnI	GGCC	5 cut(s)	363, 457, 741, 843, 902
BsoBI	CYCGRG	2 cut(s)	189, 340
Bsp1286I	GDGCHC	4 cut(s)	10, 198, 799, 1051
Bsp143I	GATC	5 cut(s)	169, 178, 335, 372, 436
Bsp19I	CCATGG	1 cut(s)	678
BspACI	CCGC	6 cut(s)	127, 348, 738, 792, 917, 1005
BspANI	GGCC	5 cut(s)	363, 457, 741, 843, 902
BspCNI	CTCAG	2 cut(s)	742, 908
BspDI	ATCGAT	1 cut(s)	168
BspFNI	CGCG	1 cut(s)	792
BspLI	GGNNCC	5 cut(s)	180, 352, 426, 458, 979
BspMAI	CTGCAG	2 cut(s)	433, 925
BspPI	GGATC	3 cut(s)	173, 186, 330
BspT107I	GGYRCC	2 cut(s)	350, 977
BspTI	CTTAAG	2 cut(s)	331, 584
BsrBI	CCGCTC	1 cut(s)	129
BsrFI	RCCGGY	1 cut(s)	108
BssAI	RCCGGY	1 cut(s)	108
BssECI	CCNNGG	6 cut(s)	189, 339, 340, 678, 951, 1008
BssMI	GATC	5 cut(s)	169, 178, 335, 372, 436
BssNI	GRCGYC	1 cut(s)	123
BssSI	CACGAG	1 cut(s)	404
BssT1I	CCWWGG	3 cut(s)	678, 951, 1008
Bst2BI	CACGAG	1 cut(s)	404
Bst4CI	ACNGT	5 cut(s)	67, 805, 982, 990, 1000
Bst6I	CTCTTC	2 cut(s)	465, 948
BstACI	GRCGYC	1 cut(s)	123
BstAFI	CTTAAG	2 cut(s)	331, 584
BstAPI	GCANNNNNTGC	1 cut(s)	440
BstC8I	GCNNGC	2 cut(s)	921, 1034
BstDEI	CTNAG	3 cut(s)	282, 729, 895
BstDSI	CCRYGG	1 cut(s)	678
BstF5I	GGATG	3 cut(s)	36, 496, 773
BstFNI	CGCG	1 cut(s)	792
BstKTI	GATC	5 cut(s)	172, 181, 338, 375, 439
BstMAI	GTCTC	2 cut(s)	476, 940
BstMBI	GATC	5 cut(s)	169, 178, 335, 372, 436
BstMCI	CGRYCG	2 cut(s)	364, 844
BstMWI	GCNNNNNNNGC	4 cut(s)	400, 440, 454, 920
BstNSI	RCATGY	1 cut(s)	213
BstSCI	CCNGG	9 cut(s)	118, 188, 189, 339, 340, 363, 622, 753, 879
BstSFI	CTRYAG	2 cut(s)	429, 921
BstSLI	GKGCMC	1 cut(s)	799
BstUI	CGCG	1 cut(s)	792
BstV1I	GCAGC	3 cut(s)	443, 460, 649
BstX2I	RGATCY	2 cut(s)	178, 335
BstXI	CCANNNNNNTGG	1 cut(s)	958
BstYI	RGATCY	2 cut(s)	178, 335
BstZI	CGGCCG	2 cut(s)	361, 841
Bsu15I	ATCGAT	1 cut(s)	168
BsuI	GTATCC	1 cut(s)	350
BsuRI	GGCC	5 cut(s)	363, 457, 741, 843, 902
BsuTUI	ATCGAT	1 cut(s)	168
BtgI	CCRYGG	1 cut(s)	678
BtsCI	GGATG	3 cut(s)	36, 496, 773
BtsI	GCAGTG	2 cut(s)	592, 627
BtsIMutI	CAGTG	6 cut(s)	72, 592, 627, 783, 903, 996
Cac8I	GCNNGC	2 cut(s)	921, 1034
CaiI	CAGNNNCTG	1 cut(s)	71
Cfr10I	RCCGGY	1 cut(s)	108
Cfr13I	GGNCC	3 cut(s)	425, 456, 883
Cfr9I	CCCGGG	2 cut(s)	189, 340
ClaI	ATCGAT	1 cut(s)	168
CseI	GACGC	1 cut(s)	112
Csp6I	GTAC	4 cut(s)	135, 158, 615, 788
CspAI	ACCGGT	1 cut(s)	108
CviAII	CATG	7 cut(s)	80, 210, 245, 440, 461, 679, 1057
CviQI	GTAC	4 cut(s)	135, 158, 615, 788
DdeI	CTNAG	3 cut(s)	282, 729, 895
DpnI	GATC	5 cut(s)	171, 180, 337, 374, 438
DpnII	GATC	5 cut(s)	169, 178, 335, 372, 436
EaeI	YGGCCR	2 cut(s)	361, 841
EagI	CGGCCG	2 cut(s)	361, 841
Eam1104I	CTCTTC	2 cut(s)	465, 948
EarI	CTCTTC	2 cut(s)	465, 948
EciI	GGCGGA	1 cut(s)	906
Ecl136II	GAGCTC	2 cut(s)	196, 1049
EclXI	CGGCCG	2 cut(s)	361, 841
Eco130I	CCWWGG	3 cut(s)	678, 951, 1008
Eco24I	GRGCYC	2 cut(s)	198, 1051
Eco47I	GGWCC	2 cut(s)	425, 883
Eco52I	CGGCCG	2 cut(s)	361, 841
Eco53kI	GAGCTC	2 cut(s)	196, 1049
Eco57I	CTGAAG	1 cut(s)	39
Eco88I	CYCGRG	2 cut(s)	189, 340
EcoICRI	GAGCTC	2 cut(s)	196, 1049
EcoO109I	RGGNCCY	1 cut(s)	425
EcoT14I	CCWWGG	3 cut(s)	678, 951, 1008
EcoT38I	GRGCYC	2 cut(s)	198, 1051
ErhI	CCWWGG	3 cut(s)	678, 951, 1008
FaeI	CATG	7 cut(s)	83, 213, 248, 443, 464, 682, 1060
FaqI	GGGAC	2 cut(s)	770, 984
FatI	CATG	7 cut(s)	79, 209, 244, 439, 460, 678, 1056
FauNDI	CATATG	1 cut(s)	396
Fnu4HI	GCNGC	5 cut(s)	349, 432, 449, 638, 739
FokI	GGATG	3 cut(s)	23, 503, 780
FriOI	GRGCYC	2 cut(s)	198, 1051
Fsp4HI	GCNGC	5 cut(s)	349, 432, 449, 638, 739
FspBI	CTAG	2 cut(s)	612, 686
GluI	GCNGC	5 cut(s)	349, 432, 449, 638, 739
GsuI	CTGGAG	1 cut(s)	7
HaeIII	GGCC	5 cut(s)	363, 457, 741, 843, 902
HgaI	GACGC	1 cut(s)	112
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	7 cut(s)	83, 213, 248, 443, 464, 682, 1060
HincII	GTYRAC	2 cut(s)	237, 313
HindII	GTYRAC	2 cut(s)	237, 313
HindIII	AAGCTT	1 cut(s)	260
HinfI	GANTC	8 cut(s)	17, 74, 92, 278, 286, 589, 891, 965
HphI	GGTGA	4 cut(s)	793, 827, 886, 974
Hpy166II	GTNNAC	5 cut(s)	237, 313, 414, 797, 877
Hpy188I	TCNGA	5 cut(s)	91, 97, 183, 501, 732
Hpy188III	TCNNGA	6 cut(s)	24, 388, 544, 605, 969, 1040
Hpy8I	GTNNAC	5 cut(s)	237, 313, 414, 797, 877
HpyAV	CCTTC	4 cut(s)	319, 505, 752, 1021
HpyCH4III	ACNGT	5 cut(s)	67, 805, 982, 990, 1000
HpyCH4IV	ACGT	1 cut(s)	828
HpyCH4V	TGCA	6 cut(s)	431, 637, 781, 797, 923, 986
HpyF10VI	GCNNNNNNNGC	4 cut(s)	400, 440, 454, 920
HpyF3I	CTNAG	3 cut(s)	282, 729, 895
HpySE526I	ACGT	1 cut(s)	828
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	7 cut(s)	83, 213, 248, 443, 464, 682, 1060
Kzo9I	GATC	5 cut(s)	169, 178, 335, 372, 436
LmnI	GCTCC	3 cut(s)	134, 193, 919
Lsp1109I	GCAGC	3 cut(s)	443, 460, 649
LweI	GCATC	1 cut(s)	1045
MaeI	CTAG	2 cut(s)	612, 686
MaeII	ACGT	1 cut(s)	828
MaeIII	GTNAC	4 cut(s)	590, 602, 815, 1000
MalI	GATC	5 cut(s)	171, 180, 337, 374, 438
MbiI	CCGCTC	1 cut(s)	129
MboI	GATC	5 cut(s)	169, 178, 335, 372, 436
MboII	GAAGA	5 cut(s)	376, 482, 742, 851, 935
MfeI	CAATTG	1 cut(s)	572
MflI	RGATCY	2 cut(s)	178, 335
MhlI	GDGCHC	4 cut(s)	10, 198, 799, 1051
MluCI	AATT	5 cut(s)	320, 572, 577, 643, 846
MlyI	GAGTC	4 cut(s)	11, 280, 287, 598
MmeI	TCCRAC	3 cut(s)	69, 861, 910
MseI	TTAA	6 cut(s)	332, 561, 585, 807, 1062, 1069
MspA1I	CMGCKG	2 cut(s)	140, 738
MspCI	CTTAAG	2 cut(s)	331, 584
MspR9I	CCNGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
MunI	CAATTG	1 cut(s)	572
Mva1269I	GAATGC	2 cut(s)	190, 249
MvnI	CGCG	1 cut(s)	792
MwoI	GCNNNNNNNGC	4 cut(s)	400, 440, 454, 920
NciI	CCSGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
NcoI	CCATGG	1 cut(s)	678
NdeI	CATATG	1 cut(s)	396
NdeII	GATC	5 cut(s)	169, 178, 335, 372, 436
NlaIII	CATG	7 cut(s)	83, 213, 248, 443, 464, 682, 1060
NlaIV	GGNNCC	5 cut(s)	180, 352, 426, 458, 979
NmuCI	GTSAC	3 cut(s)	590, 602, 815
NspI	RCATGY	1 cut(s)	213
PctI	GAATGC	2 cut(s)	190, 249
PfeI	GAWTC	4 cut(s)	74, 92, 891, 965
Pfl23II	CGTACG	1 cut(s)	787
PfoI	TCCNGGA	1 cut(s)	753
PinAI	ACCGGT	1 cut(s)	108
PkrI	GCNGC	5 cut(s)	350, 433, 450, 639, 740
PleI	GAGTC	4 cut(s)	11, 280, 286, 597
PpsI	GAGTC	4 cut(s)	11, 280, 286, 597
PpuMI	RGGWCCY	1 cut(s)	425
PshBI	ATTAAT	1 cut(s)	561
Psp124BI	GAGCTC	2 cut(s)	198, 1051
Psp5II	RGGWCCY	1 cut(s)	425
PspLI	CGTACG	1 cut(s)	787
PspN4I	GGNNCC	5 cut(s)	180, 352, 426, 458, 979
PspPI	GGNCC	3 cut(s)	425, 456, 883
PspPPI	RGGWCCY	1 cut(s)	425
PstI	CTGCAG	2 cut(s)	433, 925
PstNI	CAGNNNCTG	1 cut(s)	71
PsuI	RGATCY	2 cut(s)	178, 335
PvuII	CAGCTG	1 cut(s)	140
RsaI	GTAC	4 cut(s)	136, 159, 616, 789
RsaNI	GTAC	4 cut(s)	135, 158, 615, 788
SacI	GAGCTC	2 cut(s)	198, 1051
SaqAI	TTAA	6 cut(s)	332, 561, 585, 807, 1062, 1069
SatI	GCNGC	5 cut(s)	349, 432, 449, 638, 739
Sau3AI	GATC	5 cut(s)	169, 178, 335, 372, 436
Sau96I	GGNCC	3 cut(s)	425, 456, 883
SchI	GAGTC	4 cut(s)	11, 280, 287, 598
ScrFI	CCNGG	9 cut(s)	120, 190, 191, 341, 342, 365, 624, 755, 881
SduI	GDGCHC	4 cut(s)	10, 198, 799, 1051
SfaNI	GCATC	1 cut(s)	1045
SfcI	CTRYAG	2 cut(s)	429, 921
SinI	GGWCC	2 cut(s)	425, 883
SmaI	CCCGGG	2 cut(s)	191, 342
SmlI	CTYRAG	2 cut(s)	331, 584
SmoI	CTYRAG	2 cut(s)	331, 584
SpeI	ACTAGT	1 cut(s)	611
Sse9I	AATT	5 cut(s)	320, 572, 577, 643, 846
SsiI	CCGC	6 cut(s)	127, 348, 738, 792, 917, 1005
SspI	AATATT	1 cut(s)	811
SspMI	CTAG	2 cut(s)	612, 686
SstI	GAGCTC	2 cut(s)	198, 1051
StyD4I	CCNGG	9 cut(s)	118, 188, 189, 339, 340, 363, 622, 753, 879
StyI	CCWWGG	3 cut(s)	678, 951, 1008
TaaI	ACNGT	5 cut(s)	67, 805, 982, 990, 1000
TaiI	ACGT	1 cut(s)	831
TaqI	TCGA	3 cut(s)	168, 204, 522
TaqII	GACCGA	1 cut(s)	1059
TasI	AATT	5 cut(s)	320, 572, 577, 643, 846
TatI	WGTACW	1 cut(s)	614
TauI	GCSGC	2 cut(s)	351, 741
TfiI	GAWTC	4 cut(s)	74, 92, 891, 965
Tru1I	TTAA	6 cut(s)	332, 561, 585, 807, 1062, 1069
Tru9I	TTAA	6 cut(s)	332, 561, 585, 807, 1062, 1069
TscAI	CASTG	6 cut(s)	72, 599, 634, 783, 903, 1003
TseFI	GTSAC	3 cut(s)	590, 602, 815
TseI	GCWGC	3 cut(s)	431, 448, 637
Tsp45I	GTSAC	3 cut(s)	590, 602, 815
TspDTI	ATGAA	4 cut(s)	117, 524, 851, 1040
TspGWI	ACGGA	2 cut(s)	145, 713
TspMI	CCCGGG	2 cut(s)	189, 340
TspRI	CASTG	6 cut(s)	72, 599, 634, 783, 903, 1003
Vha464I	CTTAAG	2 cut(s)	331, 584
VneI	GTGCAC	1 cut(s)	795
VpaK11BI	GGWCC	2 cut(s)	425, 883
VspI	ATTAAT	1 cut(s)	561
XapI	RAATTY	1 cut(s)	643
XceI	RCATGY	1 cut(s)	213
XmaI	CCCGGG	2 cut(s)	189, 340
XspI	CTAG	2 cut(s)	612, 686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.