Rh6AG510200

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
68138428 .. 68139940
1513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG510200.1

Sequence Viewer

Length: 1020 bp
ATGGCTACTCCTGAGGAAGCCTACATGCGTATCATCCCCCTTGATTTTGGCTCAGCCAAATCAGTTCCAGATTCCTTCGTGTGGCCCCAAGCATCCGATGAGGTCCACTCTAGCGACGGGTTAACCATACCCGTTATCGACCTCACGGATCCGAATGCCCCGCAACTCATAACGGAGGCATGTCAGACATGGGGTATTCTCCAATTGAAAGGACATGGAATTCCAACTAAGCTTATGGAGGACATGGAGTCTGAGTGTGAAAGATTGTTTAGTCTCCCAACAGACCAAAAAATGAAGGCCTTAAGATCTCCAGGCGGGAGTACAGGATACGGTATCGTCCCGATGCAGTCCTTGTTTTCCACCACCATGTGGCACGAAGGGCTCACCATCATGGGGTCTGCAATTGATCATGCTAGGCTGCTTTGGCCCAATGATTATCAAAGATTTTGTGATAAAATAGATGATTATCAGAAGCAAATGAAGGCCTTGGCAGAGCAGCTGATGCGCATCCTCTTCAAAGCCATGAGCATTCCTGTAAAAGAAGTCAACTGGTTCGATGATCCAACCAACAGCAGCGGCTGCAATCTGGCTTTACAGCTGAACTCTTACCCTCCATGCCCTGACCCGACCCGAACCTTGGGCCTTGCACCACACACTGACACTTCCATAGTAACCCTACTCCAAGCTAAAACCAGCGGCCTCCAAGTCTTCAAAGACGGAGTTGGGTGGGTTGCGGTGAAACCCTTACCCAATGCCCTCATTGTACATCTTGGTGATTTCACCCGCATTCTATCCAATGGTCAATTCATCAGTGTTCTTCATCGTGTGGTGGTGAAACCGATCCAACGCTACTCAGTTGGATACTTCTTTAGGCCGCCAATGGATTTTGCTGTGTCACCACTTCTGTCAAAGGATTTGGGTCCGGAACAAGTTCCGCGGTATCGTTCAGTCACAGCAAAGGAGTATCTTGATCTGAAGGCCAGGCATCTTGAGAAAGCATTTTCTCTTATCGAAAATTAG

Protein Analysis

339

Amino Acids

37.85

Weight (kDa)

5.92

Isoelectric Point (pI)

36.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 43 - 137 6e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 195 - 292 1.3e-28 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 506
AccB7I CCANNNNNTGG 1 cut(s) 369
AccII CGCG 1 cut(s) 937
AccIII TCCGGA 1 cut(s) 922
AciI CCGC 9 cut(s) 161, 315, 576, 696, 734, 784, 875, 935, 937
AclWI GGATC 4 cut(s) 143, 156, 554, 835
AcsI RAATTY 1 cut(s) 219
AcuI CTGAAG 1 cut(s) 995
AdeI CACNNNGTG 1 cut(s) 369
AfaI GTAC 2 cut(s) 322, 765
AfiI CCNNNNNNNGG 4 cut(s) 81, 369, 393, 637
AflII CTTAAG 1 cut(s) 301
AgsI TTSAA 3 cut(s) 208, 517, 712
AhdI GACNNNNNGTC 1 cut(s) 247
AjnI CCWGG 2 cut(s) 310, 980
AjuI GAANNNNNNNTTGG 2 cut(s) 788, 820
AluBI AGCT 4 cut(s) 232, 499, 598, 686
AluI AGCT 4 cut(s) 232, 499, 598, 686
Alw26I GTCTC 1 cut(s) 278
AlwI GGATC 4 cut(s) 143, 156, 554, 835
AlwNI CAGNNNCTG 1 cut(s) 579
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 8 cut(s) 83, 297, 425, 483, 640, 697, 872, 978
ApeKI GCWGC 4 cut(s) 418, 496, 573, 579
ApoI RAATTY 1 cut(s) 219
Asp700I GAANNNNTTC 1 cut(s) 930
AspLEI GCGC 1 cut(s) 507
AspS9I GGNCC 5 cut(s) 84, 103, 426, 640, 920
AsuHPI GGTGA 6 cut(s) 376, 748, 772, 785, 844, 888
AvaII GGWCC 2 cut(s) 103, 920
AxyI CCTNAGG 1 cut(s) 12
BaeI ACNNNNGTAYC 2 cut(s) 13, 46
BamHI GGATCC 1 cut(s) 148
BanII GRGCYC 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 700
BbvI GCAGC 4 cut(s) 405, 508, 566, 585
BccI CCATC 1 cut(s) 395
BciT130I CCWGG 2 cut(s) 312, 982
BciVI GTATCC 2 cut(s) 320, 854
BclI TGATCA 1 cut(s) 406
BcoDI GTCTC 1 cut(s) 278
BfaI CTAG 2 cut(s) 111, 414
BfrI CTTAAG 1 cut(s) 301
BfuI GTATCC 2 cut(s) 320, 854
BglII AGATCT 1 cut(s) 305
BisI GCNGC 7 cut(s) 419, 497, 574, 577, 580, 697, 875
BlpI GCTNAGC 1 cut(s) 52
BlsI GCNGC 7 cut(s) 420, 498, 575, 578, 581, 698, 876
Bme1390I CCNGG 2 cut(s) 312, 982
Bme18I GGWCC 2 cut(s) 103, 920
BmeRI GACNNNNNGTC 1 cut(s) 247
BmgT120I GGNCC 5 cut(s) 84, 103, 426, 640, 920
BmiI GGNNCC 3 cut(s) 86, 150, 921
BmrFI CCNGG 2 cut(s) 312, 982
BmsI GCATC 5 cut(s) 101, 333, 492, 516, 994
BpiI GAAGAC 1 cut(s) 700
BplI GAGNNNNNCTC 2 cut(s) 92, 124
BpmI CTGGAG 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 52
BpuEI CTTGAG 1 cut(s) 1010
BsaBI GATNNNNATC 2 cut(s) 465, 506
BsaJI CCNNGG 3 cut(s) 486, 636, 935
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 2 cut(s) 239, 269
Bsc4I CCNNNNNNNGG 4 cut(s) 81, 369, 393, 637
Bse1I ACTGG 1 cut(s) 554
Bse21I CCTNAGG 1 cut(s) 12
Bse8I GATNNNNATC 2 cut(s) 465, 506
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 2 cut(s) 312, 982
BseDI CCNNGG 3 cut(s) 486, 636, 935
BseGI GGATG 3 cut(s) 33, 92, 507
BseJI GATNNNNATC 2 cut(s) 465, 506
BseLI CCNNNNNNNGG 4 cut(s) 81, 369, 393, 637
BseMII CTCAG 3 cut(s) 66, 243, 867
BseNI ACTGG 1 cut(s) 554
BseXI GCAGC 4 cut(s) 405, 508, 566, 585
Bsh1236I CGCG 1 cut(s) 937
BshFI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BsiSI CCGG 1 cut(s) 923
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 4 cut(s) 81, 369, 393, 637
BsmAI GTCTC 1 cut(s) 278
BsmFI GGGAC 1 cut(s) 323
BsmI GAATGC 3 cut(s) 160, 528, 786
BsnI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
Bsp1286I GDGCHC 1 cut(s) 384
Bsp13I TCCGGA 1 cut(s) 922
Bsp1407I TGTACA 1 cut(s) 763
Bsp143I GATC 6 cut(s) 148, 305, 406, 559, 840, 970
Bsp1720I GCTNAGC 1 cut(s) 52
BspACI CCGC 9 cut(s) 161, 315, 576, 696, 734, 784, 875, 935, 937
BspANI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BspCNI CTCAG 4 cut(s) 4, 65, 244, 866
BspEI TCCGGA 1 cut(s) 922
BspFNI CGCG 1 cut(s) 937
BspLI GGNNCC 3 cut(s) 86, 150, 921
BspPI GGATC 4 cut(s) 143, 156, 554, 835
BspTI CTTAAG 1 cut(s) 301
BsrGI TGTACA 1 cut(s) 763
BsrI ACTGG 1 cut(s) 554
BssECI CCNNGG 3 cut(s) 486, 636, 935
BssMI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
BssT1I CCWWGG 2 cut(s) 486, 636
Bst2UI CCWGG 2 cut(s) 312, 982
Bst4CI ACNGT 1 cut(s) 332
Bst6I CTCTTC 1 cut(s) 518
BstAFI CTTAAG 1 cut(s) 301
BstAPI GCANNNNNTGC 2 cut(s) 502, 579
BstAUI TGTACA 1 cut(s) 763
BstDEI CTNAG 5 cut(s) 12, 52, 228, 252, 853
BstDSI CCRYGG 1 cut(s) 935
BstF5I GGATG 3 cut(s) 33, 92, 507
BstFNI CGCG 1 cut(s) 937
BstHHI GCGC 1 cut(s) 507
BstKTI GATC 6 cut(s) 151, 308, 409, 562, 843, 973
BstMAI GTCTC 1 cut(s) 278
BstMBI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
BstMWI GCNNNNNNNGC 4 cut(s) 379, 424, 502, 579
BstNI CCWGG 2 cut(s) 312, 982
BstNSI RCATGY 2 cut(s) 28, 183
BstSCI CCNGG 2 cut(s) 310, 980
BstUI CGCG 1 cut(s) 937
BstV1I GCAGC 4 cut(s) 405, 508, 566, 585
BstV2I GAAGAC 1 cut(s) 700
BstX2I RGATCY 2 cut(s) 148, 305
BstYI RGATCY 2 cut(s) 148, 305
Bsu36I CCTNAGG 1 cut(s) 12
BsuI GTATCC 2 cut(s) 320, 854
BsuRI GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
BtgI CCRYGG 1 cut(s) 935
BtsCI GGATG 3 cut(s) 33, 92, 507
BtsIMutI CAGTG 2 cut(s) 654, 817
CaiI CAGNNNCTG 1 cut(s) 579
CfoI GCGC 1 cut(s) 507
Cfr13I GGNCC 5 cut(s) 84, 103, 426, 640, 920
Cfr42I CCGCGG 1 cut(s) 938
Csp6I GTAC 2 cut(s) 321, 764
CviQI GTAC 2 cut(s) 321, 764
DdeI CTNAG 5 cut(s) 12, 52, 228, 252, 853
DpnI GATC 6 cut(s) 150, 307, 408, 561, 842, 972
DpnII GATC 6 cut(s) 148, 305, 406, 559, 840, 970
DraIII CACNNNGTG 1 cut(s) 369
DriI GACNNNNNGTC 1 cut(s) 247
Eam1104I CTCTTC 1 cut(s) 518
Eam1105I GACNNNNNGTC 1 cut(s) 247
EarI CTCTTC 1 cut(s) 518
Eco130I CCWWGG 2 cut(s) 486, 636
Eco147I AGGCCT 2 cut(s) 299, 485
Eco24I GRGCYC 1 cut(s) 384
Eco47I GGWCC 2 cut(s) 103, 920
Eco57I CTGAAG 1 cut(s) 995
Eco81I CCTNAGG 1 cut(s) 12
EcoRI GAATTC 1 cut(s) 219
EcoRII CCWGG 2 cut(s) 310, 980
EcoT14I CCWWGG 2 cut(s) 486, 636
EcoT38I GRGCYC 1 cut(s) 384
ErhI CCWWGG 2 cut(s) 486, 636
FaqI GGGAC 1 cut(s) 323
FauI CCCGC 3 cut(s) 168, 308, 791
FbaI TGATCA 1 cut(s) 406
Fnu4HI GCNGC 7 cut(s) 419, 497, 574, 577, 580, 697, 875
FokI GGATG 3 cut(s) 20, 79, 494
FriOI GRGCYC 1 cut(s) 384
Fsp4HI GCNGC 7 cut(s) 419, 497, 574, 577, 580, 697, 875
FspAI RTGCGCAY 1 cut(s) 506
FspBI CTAG 2 cut(s) 111, 414
FspI TGCGCA 1 cut(s) 506
GlaI GCGC 1 cut(s) 506
GluI GCNGC 7 cut(s) 419, 497, 574, 577, 580, 697, 875
GsuI CTGGAG 1 cut(s) 294
HaeIII GGCC 8 cut(s) 85, 299, 427, 485, 642, 699, 874, 980
HapII CCGG 1 cut(s) 923
HhaI GCGC 1 cut(s) 507
Hin6I GCGC 1 cut(s) 505
HinP1I GCGC 1 cut(s) 505
HincII GTYRAC 2 cut(s) 123, 547
HindII GTYRAC 2 cut(s) 123, 547
HindIII AAGCTT 1 cut(s) 230
HinfI GANTC 2 cut(s) 71, 248
HpaI GTTAAC 1 cut(s) 123
HpaII CCGG 1 cut(s) 923
HphI GGTGA 6 cut(s) 376, 748, 772, 785, 844, 888
Hpy166II GTNNAC 3 cut(s) 106, 123, 547
Hpy188I TCNGA 6 cut(s) 97, 153, 186, 253, 471, 975
Hpy188III TCNNGA 6 cut(s) 11, 68, 340, 923, 968, 989
Hpy8I GTNNAC 3 cut(s) 106, 123, 547
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 5 cut(s) 85, 289, 371, 475, 970
HpyCH4III ACNGT 1 cut(s) 332
HpyCH4V TGCA 4 cut(s) 346, 401, 582, 647
HpyF10VI GCNNNNNNNGC 4 cut(s) 379, 424, 502, 579
HpyF3I CTNAG 5 cut(s) 12, 52, 228, 252, 853
HspAI GCGC 1 cut(s) 505
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 1 cut(s) 406
KspAI GTTAAC 1 cut(s) 123
KspI CCGCGG 1 cut(s) 938
Kzo9I GATC 6 cut(s) 148, 305, 406, 559, 840, 970
Lsp1109I GCAGC 4 cut(s) 405, 508, 566, 585
LweI GCATC 5 cut(s) 101, 333, 492, 516, 994
MaeI CTAG 2 cut(s) 111, 414
MaeIII GTNAC 3 cut(s) 670, 894, 949
MalI GATC 6 cut(s) 150, 307, 408, 561, 842, 972
MboI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
MboII GAAGA 3 cut(s) 505, 700, 809
MfeI CAATTG 2 cut(s) 203, 402
MflI RGATCY 2 cut(s) 148, 305
MhlI GDGCHC 1 cut(s) 384
MluCI AATT 5 cut(s) 203, 219, 402, 803, 1015
MlyI GAGTC 1 cut(s) 257
MmeI TCCRAC 4 cut(s) 248, 587, 838, 868
MnlI CCTC 9 cut(s) 7, 94, 152, 169, 232, 521, 621, 710, 767
MroI TCCGGA 1 cut(s) 922
MroXI GAANNNNTTC 1 cut(s) 930
MseI TTAA 2 cut(s) 122, 302
MslI CAYNNNNRTG 3 cut(s) 365, 389, 771
MspA1I CMGCKG 5 cut(s) 499, 576, 598, 696, 937
MspCI CTTAAG 1 cut(s) 301
MspI CCGG 1 cut(s) 923
MspR9I CCNGG 2 cut(s) 312, 982
MunI CAATTG 2 cut(s) 203, 402
Mva1269I GAATGC 3 cut(s) 160, 528, 786
MvaI CCWGG 2 cut(s) 312, 982
MvnI CGCG 1 cut(s) 937
MwoI GCNNNNNNNGC 4 cut(s) 379, 424, 502, 579
NdeII GATC 6 cut(s) 148, 305, 406, 559, 840, 970
NlaIV GGNNCC 3 cut(s) 86, 150, 921
NmuCI GTSAC 2 cut(s) 894, 949
NsbI TGCGCA 1 cut(s) 506
NspI RCATGY 2 cut(s) 28, 183
PceI AGGCCT 2 cut(s) 299, 485
PctI GAATGC 3 cut(s) 160, 528, 786
PdmI GAANNNNTTC 1 cut(s) 930
PfeI GAWTC 1 cut(s) 71
PflMI CCANNNNNTGG 1 cut(s) 369
PkrI GCNGC 7 cut(s) 420, 498, 575, 578, 581, 698, 876
PleI GAGTC 1 cut(s) 256
PpsI GAGTC 1 cut(s) 256
Psp6I CCWGG 2 cut(s) 310, 980
PspGI CCWGG 2 cut(s) 310, 980
PspN4I GGNNCC 3 cut(s) 86, 150, 921
PspPI GGNCC 5 cut(s) 84, 103, 426, 640, 920
PstNI CAGNNNCTG 1 cut(s) 579
PsuI RGATCY 2 cut(s) 148, 305
PvuII CAGCTG 2 cut(s) 499, 598
RsaI GTAC 2 cut(s) 322, 765
RsaNI GTAC 2 cut(s) 321, 764
RseI CAYNNNNRTG 3 cut(s) 365, 389, 771
SacII CCGCGG 1 cut(s) 938
SaqAI TTAA 2 cut(s) 122, 302
SatI GCNGC 7 cut(s) 419, 497, 574, 577, 580, 697, 875
Sau3AI GATC 6 cut(s) 148, 305, 406, 559, 840, 970
Sau96I GGNCC 5 cut(s) 84, 103, 426, 640, 920
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 2 cut(s) 312, 982
SduI GDGCHC 1 cut(s) 384
SetI ASST 7 cut(s) 105, 144, 234, 501, 600, 638, 688
SfaNI GCATC 5 cut(s) 101, 333, 492, 516, 994
Sfr303I CCGCGG 1 cut(s) 938
SgrBI CCGCGG 1 cut(s) 938
SinI GGWCC 2 cut(s) 103, 920
SmiMI CAYNNNNRTG 3 cut(s) 365, 389, 771
SmlI CTYRAG 2 cut(s) 301, 989
SmoI CTYRAG 2 cut(s) 301, 989
Sse9I AATT 5 cut(s) 203, 219, 402, 803, 1015
SseBI AGGCCT 2 cut(s) 299, 485
SsiI CCGC 9 cut(s) 161, 315, 576, 696, 734, 784, 875, 935, 937
SspMI CTAG 2 cut(s) 111, 414
StuI AGGCCT 2 cut(s) 299, 485
StyD4I CCNGG 2 cut(s) 310, 980
StyI CCWWGG 2 cut(s) 486, 636
TaaI ACNGT 1 cut(s) 332
TaqI TCGA 3 cut(s) 138, 555, 1011
TasI AATT 5 cut(s) 203, 219, 402, 803, 1015
TatI WGTACW 2 cut(s) 320, 763
TauI GCSGC 3 cut(s) 579, 699, 877
TfiI GAWTC 1 cut(s) 71
Tru1I TTAA 2 cut(s) 122, 302
Tru9I TTAA 2 cut(s) 122, 302
TscAI CASTG 2 cut(s) 661, 817
TseFI GTSAC 2 cut(s) 894, 949
TseI GCWGC 4 cut(s) 418, 496, 573, 579
Tsp45I GTSAC 2 cut(s) 894, 949
TspDTI ATGAA 4 cut(s) 308, 494, 796, 809
TspGWI ACGGA 3 cut(s) 161, 188, 732
TspRI CASTG 2 cut(s) 661, 817
Van91I CCANNNNNTGG 1 cut(s) 369
Vha464I CTTAAG 1 cut(s) 301
VpaK11BI GGWCC 2 cut(s) 103, 920
XapI RAATTY 1 cut(s) 219
XceI RCATGY 2 cut(s) 28, 183
XmnI GAANNNNTTC 1 cut(s) 930
XspI CTAG 2 cut(s) 111, 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.