FvH4_2g37090

F-box only protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
27059309 .. 27061753
2445 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37090.t1

Sequence Viewer

Length: 1254 bp
ATGGAGCCTGAAAACTGCTCAGCTTTGATGATGACTCGGAAGAGAAAGTCCCATATAAGCACATTTTTTATGGATGAGCTTAATGAAGACCTTCTTGAAGGGGTCCTTTCTAGGCTACCAACCTCTGCATTCTTCCGCCTCTCTTCGGTTTGCAAGAGATGGAAATCAGTTGCAAACTCCTCAAGTTTCAAGCTTGCCTGCTCACAAATCCCTTCTCGGGATCCATGGTTTTTCATGGTCGACTCTCATCTCAATCGATCCATCGTGTTTGACTCTGCTGAAAAAAACTGGAAGAAACTTAACCATCCACCTCTCCTCCAGAAAAACTCCAACTACAATTCCATGCCTGTTTCAGCCTCTGGTGGCTTTATCTGTTTCCGAAATTCATATGGCAACTTTGTCGTGTGCAATCCTGTGACAGGGTCCTGCAACGAACAACCTCCACTTGATCCAGCCCTACAAAGTCTCACATTCCATGCCATTGTGATGAGCTCATGTCCCAACAAGCATGATCAGTCCTCTTACAAGCTTGTAGTTGTCTTTGGTGAGCTTCCAAAGCTGTCATTTAGAGTGTACAACTCCAGCAGTGGTTGCTGGGAAGAAGAGATCGCCTTGTCCAAGAAGTTCAACGATGATGATAAGTCAAAGGAACTTGATGGTTCTACAGAATTTGACTCGAATGATGACAGTGCTGTGTACTTCCTCAGCAAGGCAGGAAATGTAGTGGCAACCAATATGCAAAGAAGCCCATCTAAGCAATACTCATCGGTTATCACTAGCAAAGATGGTGAGGAAATAGTTCATTTCCTTAGCTCCTCGGGTTCAATTGTGGCATGCAATCTGACCTCCAAGTGCTTCATCGAGTACCCGAGGCTACTTCCTGTCTTCTACGAGTACTCCATTGACTTGGTGGAGTGTGGAGGCAGGATGCTGGTGGTTTTGTTGTCAGAATTCTTTGGAAGCGCTAGCCTTAGGGTTTGGTGTTATGATGAGGATATTCGAAGTTGGCAACAAATTGCAGCAATGCCACCATCAATGACACATGAATGGTATGGCAAGAATGTGGATATCAACTGTGTTGGGGCAGGTGACCAAATATTGATATGCTTAAGTTCTGCTGAGATTTCTAGCTGTGTTATGTGTGAGTTGGCTGCTAATGAATGGGTTGAATTGCCCAAATGCTTTGTGGATGGTGAAGCCGTCAAGTTTATGTCTGCCTTCTCATTCCAGCCAAGGATTGAGGCTTCTCTATGA

Protein Analysis

418

Amino Acids

46.69

Weight (kDa)

5.32

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 64 6.4e-09 F-box domain
Beta-prop_KIB1-4 PF03478 114 - 342 1.2e-08 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011756)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1076
Acc36I ACCTGC 1 cut(s) 1076
AccI GTMKAC 1 cut(s) 240
AciI CCGC 1 cut(s) 136
AclWI GGATC 4 cut(s) 215, 228, 252, 443
AcsI RAATTY 3 cut(s) 382, 668, 950
AfaI GTAC 4 cut(s) 575, 698, 866, 896
AfeI AGCGCT 1 cut(s) 964
AfiI CCNNNNNNNGG 4 cut(s) 145, 217, 419, 709
AflII CTTAAG 1 cut(s) 1108
AgsI TTSAA 5 cut(s) 98, 190, 628, 825, 1169
AluBI AGCT 9 cut(s) 23, 79, 193, 492, 529, 550, 559, 813, 1131
AluI AGCT 9 cut(s) 23, 79, 193, 492, 529, 550, 559, 813, 1131
Alw21I GWGCWC 1 cut(s) 494
Alw26I GTCTC 1 cut(s) 470
AlwI GGATC 4 cut(s) 215, 228, 252, 443
AlwNI CAGNNNCTG 1 cut(s) 359
Ama87I CYCGRG 3 cut(s) 216, 817, 868
Aor51HI AGCGCT 1 cut(s) 964
ApeKI GCWGC 2 cut(s) 1019, 1151
ApoI RAATTY 3 cut(s) 382, 668, 950
Asp700I GAANNNNTTC 2 cut(s) 90, 798
AspLEI GCGC 1 cut(s) 965
AspS9I GGNCC 2 cut(s) 103, 423
AsuHPI GGTGA 4 cut(s) 557, 800, 1100, 1205
AsuII TTCGAA 1 cut(s) 1000
AsuNHI GCTAGC 1 cut(s) 965
AvaI CYCGRG 3 cut(s) 216, 817, 868
AvaII GGWCC 2 cut(s) 103, 423
AxyI CCTNAGG 1 cut(s) 971
BamHI GGATCC 1 cut(s) 220
BanII GRGCYC 1 cut(s) 494
BbsI GAAGAC 2 cut(s) 93, 877
Bbv12I GWGCWC 1 cut(s) 494
BbvCI CCTCAGC 1 cut(s) 704
BbvI GCAGC 2 cut(s) 1031, 1138
BccI CCATC 8 cut(s) 153, 269, 312, 650, 757, 779, 1039, 1184
BceAI ACGGC 1 cut(s) 1184
BcgI CGANNNNNNTGC 2 cut(s) 382, 416
BclI TGATCA 1 cut(s) 511
BcoDI GTCTC 1 cut(s) 470
BfaI CTAG 4 cut(s) 111, 777, 966, 1128
BfmI CTRYAG 1 cut(s) 663
BfoI RGCGCY 1 cut(s) 966
BfrI CTTAAG 1 cut(s) 1108
BfuAI ACCTGC 1 cut(s) 1076
BisI GCNGC 2 cut(s) 1020, 1152
BlpI GCTNAGC 1 cut(s) 19
BlsI GCNGC 2 cut(s) 1021, 1153
BmcAI AGTACT 1 cut(s) 896
Bme18I GGWCC 2 cut(s) 103, 423
BmeT110I CYCGRG 3 cut(s) 216, 817, 868
BmgT120I GGNCC 2 cut(s) 103, 423
BmiI GGNNCC 4 cut(s) 6, 104, 222, 424
BmsI GCATC 1 cut(s) 918
BmtI GCTAGC 1 cut(s) 969
BpiI GAAGAC 2 cut(s) 93, 877
BpmI CTGGAG 2 cut(s) 302, 565
Bpu10I CCTNAGC 2 cut(s) 704, 809
Bpu1102I GCTNAGC 1 cut(s) 19
Bpu14I TTCGAA 1 cut(s) 1000
BpuEI CTTGAG 1 cut(s) 166
Bsa29I ATCGAT 1 cut(s) 256
BsaBI GATNNNNATC 1 cut(s) 163
BsaJI CCNNGG 4 cut(s) 224, 816, 869, 1232
BsaXI ACNNNNNCTCC 4 cut(s) 300, 330, 881, 911
Bsc4I CCNNNNNNNGG 4 cut(s) 145, 217, 419, 709
Bse1I ACTGG 1 cut(s) 293
Bse21I CCTNAGG 1 cut(s) 971
Bse3DI GCAATG 1 cut(s) 1029
Bse8I GATNNNNATC 1 cut(s) 163
BseCI ATCGAT 1 cut(s) 256
BseDI CCNNGG 4 cut(s) 224, 816, 869, 1232
BseGI GGATG 4 cut(s) 79, 304, 933, 1195
BseJI GATNNNNATC 1 cut(s) 163
BseLI CCNNNNNNNGG 4 cut(s) 145, 217, 419, 709
BseMI GCAATG 1 cut(s) 1029
BseMII CTCAG 3 cut(s) 33, 718, 1110
BseNI ACTGG 1 cut(s) 293
BseRI GAGGAG 3 cut(s) 169, 305, 805
BseXI GCAGC 2 cut(s) 1031, 1138
BseYI CCCAGC 1 cut(s) 594
BshVI ATCGAT 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 494
BsiHKCI CYCGRG 3 cut(s) 216, 817, 868
BslFI GGGAC 2 cut(s) 34, 483
BslI CCNNNNNNNGG 4 cut(s) 145, 217, 419, 709
BsmAI GTCTC 1 cut(s) 470
BsmFI GGGAC 2 cut(s) 34, 483
BsmI GAATGC 1 cut(s) 128
BsoBI CYCGRG 3 cut(s) 216, 817, 868
Bsp119I TTCGAA 1 cut(s) 1000
Bsp1286I GDGCHC 1 cut(s) 494
Bsp1407I TGTACA 1 cut(s) 573
Bsp143I GATC 5 cut(s) 220, 257, 448, 511, 606
Bsp1720I GCTNAGC 1 cut(s) 19
Bsp19I CCATGG 1 cut(s) 224
BspACI CCGC 1 cut(s) 136
BspCNI CTCAG 3 cut(s) 32, 717, 1111
BspDI ATCGAT 1 cut(s) 256
BspLI GGNNCC 4 cut(s) 6, 104, 222, 424
BspMI ACCTGC 1 cut(s) 1076
BspOI GCTAGC 1 cut(s) 969
BspPI GGATC 4 cut(s) 215, 228, 252, 443
BspT104I TTCGAA 1 cut(s) 1000
BspTI CTTAAG 1 cut(s) 1108
BsrDI GCAATG 1 cut(s) 1029
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 1 cut(s) 293
BssECI CCNNGG 4 cut(s) 224, 816, 869, 1232
BssMI GATC 5 cut(s) 220, 257, 448, 511, 606
BssT1I CCWWGG 2 cut(s) 224, 1232
Bst4CI ACNGT 2 cut(s) 689, 1076
Bst6I CTCTTC 3 cut(s) 35, 148, 597
BstAFI CTTAAG 1 cut(s) 1108
BstAPI GCANNNNNTGC 1 cut(s) 591
BstAUI TGTACA 1 cut(s) 573
BstBI TTCGAA 1 cut(s) 1000
BstC8I GCNNGC 4 cut(s) 195, 199, 835, 967
BstDEI CTNAG 6 cut(s) 19, 704, 753, 809, 971, 1119
BstDSI CCRYGG 1 cut(s) 224
BstEII GGTNACC 1 cut(s) 1088
BstENI CCTNNNNNAGG 2 cut(s) 417, 707
BstF5I GGATG 4 cut(s) 79, 304, 933, 1195
BstH2I RGCGCY 1 cut(s) 966
BstHHI GCGC 1 cut(s) 965
BstKTI GATC 5 cut(s) 223, 260, 451, 514, 609
BstMAI GTCTC 1 cut(s) 470
BstMBI GATC 5 cut(s) 220, 257, 448, 511, 606
BstMWI GCNNNNNNNGC 2 cut(s) 556, 591
BstNSI RCATGY 1 cut(s) 837
BstPI GGTNACC 1 cut(s) 1088
BstSFI CTRYAG 1 cut(s) 663
BstV1I GCAGC 2 cut(s) 1031, 1138
BstV2I GAAGAC 2 cut(s) 93, 877
BstX2I RGATCY 1 cut(s) 220
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 1 cut(s) 220
Bsu15I ATCGAT 1 cut(s) 256
Bsu36I CCTNAGG 1 cut(s) 971
BsuTUI ATCGAT 1 cut(s) 256
BtgI CCRYGG 1 cut(s) 224
BtsCI GGATG 4 cut(s) 79, 304, 933, 1195
BtsI GCAGTG 1 cut(s) 592
BtsIMutI CAGTG 2 cut(s) 592, 694
BveI ACCTGC 1 cut(s) 1076
Cac8I GCNNGC 4 cut(s) 195, 199, 835, 967
CaiI CAGNNNCTG 1 cut(s) 359
CfoI GCGC 1 cut(s) 965
Cfr13I GGNCC 2 cut(s) 103, 423
ClaI ATCGAT 1 cut(s) 256
Csp6I GTAC 4 cut(s) 574, 697, 865, 895
CviAII CATG 8 cut(s) 225, 235, 343, 476, 495, 509, 834, 1043
CviQI GTAC 4 cut(s) 574, 697, 865, 895
DdeI CTNAG 6 cut(s) 19, 704, 753, 809, 971, 1119
DpnI GATC 5 cut(s) 222, 259, 450, 513, 608
DpnII GATC 5 cut(s) 220, 257, 448, 511, 606
Eam1104I CTCTTC 3 cut(s) 35, 148, 597
EarI CTCTTC 3 cut(s) 35, 148, 597
EciI GGCGGA 1 cut(s) 125
Ecl136II GAGCTC 1 cut(s) 492
Eco130I CCWWGG 2 cut(s) 224, 1232
Eco24I GRGCYC 1 cut(s) 494
Eco32I GATATC 1 cut(s) 1069
Eco47I GGWCC 2 cut(s) 103, 423
Eco47III AGCGCT 1 cut(s) 964
Eco53kI GAGCTC 1 cut(s) 492
Eco81I CCTNAGG 1 cut(s) 971
Eco88I CYCGRG 3 cut(s) 216, 817, 868
Eco91I GGTNACC 1 cut(s) 1088
EcoICRI GAGCTC 1 cut(s) 492
EcoNI CCTNNNNNAGG 2 cut(s) 417, 707
EcoO109I RGGNCCY 2 cut(s) 103, 423
EcoO65I GGTNACC 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 950
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 2 cut(s) 224, 1232
EcoT38I GRGCYC 1 cut(s) 494
ErhI CCWWGG 2 cut(s) 224, 1232
FaeI CATG 8 cut(s) 228, 238, 346, 479, 498, 512, 837, 1046
FalI AAGNNNNNCTT 4 cut(s) 78, 110, 90, 122
FaqI GGGAC 2 cut(s) 34, 483
FatI CATG 8 cut(s) 224, 234, 342, 475, 494, 508, 833, 1042
FauNDI CATATG 1 cut(s) 388
FbaI TGATCA 1 cut(s) 511
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 2 cut(s) 1020, 1152
FokI GGATG 4 cut(s) 86, 291, 940, 1202
FriOI GRGCYC 1 cut(s) 494
Fsp4HI GCNGC 2 cut(s) 1020, 1152
FspBI CTAG 4 cut(s) 111, 777, 966, 1128
GlaI GCGC 1 cut(s) 964
GluI GCNGC 2 cut(s) 1020, 1152
GsaI CCCAGC 1 cut(s) 598
GsuI CTGGAG 2 cut(s) 302, 565
HaeII RGCGCY 1 cut(s) 966
HhaI GCGC 1 cut(s) 965
Hin1II CATG 8 cut(s) 228, 238, 346, 479, 498, 512, 837, 1046
Hin6I GCGC 1 cut(s) 963
HinP1I GCGC 1 cut(s) 963
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HindIII AAGCTT 2 cut(s) 191, 527
HinfI GANTC 4 cut(s) 34, 242, 272, 674
HphI GGTGA 4 cut(s) 557, 800, 1100, 1205
Hpy166II GTNNAC 3 cut(s) 241, 574, 697
Hpy188I TCNGA 4 cut(s) 39, 380, 843, 949
Hpy188III TCNNGA 3 cut(s) 95, 218, 319
Hpy8I GTNNAC 3 cut(s) 241, 574, 697
HpyAV CCTTC 4 cut(s) 92, 101, 222, 1228
HpyCH4III ACNGT 2 cut(s) 689, 1076
HpyCH4V TGCA 8 cut(s) 128, 153, 173, 408, 429, 739, 837, 1019
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 591
HpyF3I CTNAG 6 cut(s) 19, 704, 753, 809, 971, 1119
Hsp92II CATG 8 cut(s) 228, 238, 346, 479, 498, 512, 837, 1046
HspAI GCGC 1 cut(s) 963
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 5 cut(s) 220, 257, 448, 511, 606
LmnI GCTCC 2 cut(s) 4, 818
Lsp1109I GCAGC 2 cut(s) 1031, 1138
LweI GCATC 1 cut(s) 918
MaeI CTAG 4 cut(s) 111, 777, 966, 1128
MaeIII GTNAC 2 cut(s) 415, 1088
MalI GATC 5 cut(s) 222, 259, 450, 513, 608
MboI GATC 5 cut(s) 220, 257, 448, 511, 606
MboII GAAGA 8 cut(s) 52, 98, 124, 135, 304, 611, 614, 877
MfeI CAATTG 1 cut(s) 825
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 1 cut(s) 494
MluCI AATT 7 cut(s) 337, 382, 668, 825, 950, 1014, 1169
MlyI GAGTC 4 cut(s) 28, 236, 266, 668
MmeI TCCRAC 1 cut(s) 354
MroXI GAANNNNTTC 2 cut(s) 90, 798
MseI TTAA 3 cut(s) 81, 300, 1109
MslI CAYNNNNRTG 2 cut(s) 485, 1045
MspCI CTTAAG 1 cut(s) 1108
MunI CAATTG 1 cut(s) 825
Mva1269I GAATGC 1 cut(s) 128
MwoI GCNNNNNNNGC 2 cut(s) 556, 591
NcoI CCATGG 1 cut(s) 224
NdeI CATATG 1 cut(s) 388
NdeII GATC 5 cut(s) 220, 257, 448, 511, 606
NheI GCTAGC 1 cut(s) 965
NlaIII CATG 8 cut(s) 228, 238, 346, 479, 498, 512, 837, 1046
NlaIV GGNNCC 4 cut(s) 6, 104, 222, 424
NmuCI GTSAC 2 cut(s) 415, 1088
NspI RCATGY 1 cut(s) 837
NspV TTCGAA 1 cut(s) 1000
PaeI GCATGC 1 cut(s) 837
PaqCI CACCTGC 1 cut(s) 1076
PctI GAATGC 1 cut(s) 128
PdmI GAANNNNTTC 2 cut(s) 90, 798
PflFI GACNNNGTC 1 cut(s) 421
PkrI GCNGC 2 cut(s) 1021, 1153
PleI GAGTC 4 cut(s) 28, 236, 266, 668
PpsI GAGTC 4 cut(s) 28, 236, 266, 668
PpuMI RGGWCCY 2 cut(s) 103, 423
Psp124BI GAGCTC 1 cut(s) 494
Psp5II RGGWCCY 2 cut(s) 103, 423
PspEI GGTNACC 1 cut(s) 1088
PspFI CCCAGC 1 cut(s) 594
PspN4I GGNNCC 4 cut(s) 6, 104, 222, 424
PspPI GGNCC 2 cut(s) 103, 423
PspPPI RGGWCCY 2 cut(s) 103, 423
PstNI CAGNNNCTG 1 cut(s) 359
PsuI RGATCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 421
RsaI GTAC 4 cut(s) 575, 698, 866, 896
RsaNI GTAC 4 cut(s) 574, 697, 865, 895
RseI CAYNNNNRTG 2 cut(s) 485, 1045
SacI GAGCTC 1 cut(s) 494
SalI GTCGAC 1 cut(s) 239
SaqAI TTAA 3 cut(s) 81, 300, 1109
SatI GCNGC 2 cut(s) 1020, 1152
Sau3AI GATC 5 cut(s) 220, 257, 448, 511, 606
Sau96I GGNCC 2 cut(s) 103, 423
ScaI AGTACT 1 cut(s) 896
SchI GAGTC 4 cut(s) 28, 236, 266, 668
SduI GDGCHC 1 cut(s) 494
SfaNI GCATC 1 cut(s) 918
SfcI CTRYAG 1 cut(s) 663
SfuI TTCGAA 1 cut(s) 1000
SinI GGWCC 2 cut(s) 103, 423
SmiMI CAYNNNNRTG 2 cut(s) 485, 1045
SmlI CTYRAG 2 cut(s) 181, 1108
SmoI CTYRAG 2 cut(s) 181, 1108
SphI GCATGC 1 cut(s) 837
Sse9I AATT 7 cut(s) 337, 382, 668, 825, 950, 1014, 1169
SsiI CCGC 1 cut(s) 136
SspI AATATT 1 cut(s) 1098
SspMI CTAG 4 cut(s) 111, 777, 966, 1128
SstI GAGCTC 1 cut(s) 494
StyI CCWWGG 2 cut(s) 224, 1232
TaaI ACNGT 2 cut(s) 689, 1076
TaqI TCGA 5 cut(s) 240, 256, 677, 861, 1000
TasI AATT 7 cut(s) 337, 382, 668, 825, 950, 1014, 1169
TatI WGTACW 3 cut(s) 573, 696, 894
Tru1I TTAA 3 cut(s) 81, 300, 1109
Tru9I TTAA 3 cut(s) 81, 300, 1109
TscAI CASTG 2 cut(s) 592, 694
TseFI GTSAC 2 cut(s) 415, 1088
TseI GCWGC 2 cut(s) 1019, 1151
Tsp45I GTSAC 2 cut(s) 415, 1088
TspDTI ATGAA 7 cut(s) 99, 223, 375, 791, 847, 1059, 1173
TspRI CASTG 2 cut(s) 592, 694
Tth111I GACNNNGTC 1 cut(s) 421
Vha464I CTTAAG 1 cut(s) 1108
VpaK11BI GGWCC 2 cut(s) 103, 423
XagI CCTNNNNNAGG 2 cut(s) 417, 707
XapI RAATTY 3 cut(s) 382, 668, 950
XceI RCATGY 1 cut(s) 837
XcmI CCANNNNNNNNNTGG 2 cut(s) 907, 1183
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 2 cut(s) 90, 798
XspI CTAG 4 cut(s) 111, 777, 966, 1128
ZrmI AGTACT 1 cut(s) 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.