F-box only protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33160 AT4G33160 |
| fragaria_vesca | FvH4_2g37090 |
| malus_domestica | MD08G1047200.v1.1 MD15G1046700.v1.1 |
| prunus_persica | Prupe.1G401100_v2.0.a1 |
| pyrus_communis | pycom08g03960 pycom15g04440 pycom15g04450 |
| rosa_chinensis | RchiOBHm_Chr6g0304701 |
| rosa_multiflora | Rmu_co8288461.1_g000001 Rmu_sc0003341.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00163580 |
| rosa_rugosa | Rorug06G0333600 |
| rosa_samantha | Rh6AG445700 Rh6BG456200 Rh6CG458600 Rh6DG445800 |
| rosa_wichuraiana | Rw6G038760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 540 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1155 |
| AccII | CGCG | 2 cut(s) | 959, 1028 |
| AciI | CCGC | 4 cut(s) | 154, 397, 912, 1026 |
| AclWI | GGATC | 6 cut(s) | 220, 233, 246, 254, 461, 474 |
| AcsI | RAATTY | 1 cut(s) | 944 |
| AdeI | CACNNNGTG | 1 cut(s) | 846 |
| AfaI | GTAC | 2 cut(s) | 860, 890 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 163, 235, 437, 463, 703, 1155 |
| AflII | CTTAAG | 1 cut(s) | 1102 |
| AgsI | TTSAA | 3 cut(s) | 75, 657, 1163 |
| AjnI | CCWGG | 1 cut(s) | 863 |
| AleI | CACNNNNGTG | 1 cut(s) | 1039 |
| Alw21I | GWGCWC | 2 cut(s) | 9, 512 |
| Alw26I | GTCTC | 3 cut(s) | 124, 614, 782 |
| AlwI | GGATC | 6 cut(s) | 220, 233, 246, 254, 461, 474 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 377, 1093 |
| Ama87I | CYCGRG | 1 cut(s) | 234 |
| AoxI | GGCC | 1 cut(s) | 1077 |
| ApeKI | GCWGC | 1 cut(s) | 1013 |
| ApoI | RAATTY | 1 cut(s) | 944 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AspLEI | GCGC | 1 cut(s) | 959 |
| AspS9I | GGNCC | 1 cut(s) | 1077 |
| AsuHPI | GGTGA | 2 cut(s) | 1094, 1199 |
| AsuII | TTCGAA | 1 cut(s) | 951 |
| AvaI | CYCGRG | 1 cut(s) | 234 |
| AxyI | CCTNAGG | 1 cut(s) | 965 |
| BamHI | GGATCC | 2 cut(s) | 238, 466 |
| BanII | GRGCYC | 1 cut(s) | 512 |
| BauI | CACGAG | 1 cut(s) | 1037 |
| BbsI | GAAGAC | 3 cut(s) | 111, 547, 871 |
| Bbv12I | GWGCWC | 2 cut(s) | 9, 512 |
| BbvCI | CCTCAGC | 1 cut(s) | 803 |
| BbvI | GCAGC | 1 cut(s) | 1025 |
| BccI | CCATC | 5 cut(s) | 171, 478, 751, 1178, 1202 |
| BceAI | ACGGC | 1 cut(s) | 671 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 665, 699 |
| BciT130I | CCWGG | 1 cut(s) | 865 |
| BciVI | GTATCC | 1 cut(s) | 433 |
| BclI | TGATCA | 2 cut(s) | 526, 1084 |
| BcoDI | GTCTC | 3 cut(s) | 124, 614, 782 |
| BfaI | CTAG | 1 cut(s) | 53 |
| BfmI | CTRYAG | 1 cut(s) | 335 |
| BfrI | CTTAAG | 1 cut(s) | 1102 |
| BfuI | GTATCC | 1 cut(s) | 433 |
| BisI | GCNGC | 1 cut(s) | 1014 |
| BlsI | GCNGC | 1 cut(s) | 1015 |
| BmcAI | AGTACT | 1 cut(s) | 890 |
| Bme1390I | CCNGG | 1 cut(s) | 865 |
| BmeT110I | CYCGRG | 1 cut(s) | 234 |
| BmgT120I | GGNCC | 1 cut(s) | 1077 |
| BmiI | GGNNCC | 3 cut(s) | 240, 468, 1078 |
| BmrFI | CCNGG | 1 cut(s) | 865 |
| BmrI | ACTGGG | 2 cut(s) | 195, 869 |
| BmsI | GCATC | 2 cut(s) | 200, 383 |
| BmuI | ACTGGG | 2 cut(s) | 195, 869 |
| BpiI | GAAGAC | 3 cut(s) | 111, 547, 871 |
| Bpu10I | CCTNAGC | 2 cut(s) | 698, 803 |
| Bpu14I | TTCGAA | 1 cut(s) | 951 |
| BpuEI | CTTGAG | 1 cut(s) | 580 |
| Bsa29I | ATCGAT | 1 cut(s) | 274 |
| BsaBI | GATNNNNATC | 1 cut(s) | 181 |
| BsaJI | CCNNGG | 3 cut(s) | 242, 863, 1226 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 163, 235, 437, 463, 703, 1155 |
| Bse118I | RCCGGY | 1 cut(s) | 1079 |
| Bse1I | ACTGG | 3 cut(s) | 201, 468, 875 |
| Bse21I | CCTNAGG | 1 cut(s) | 965 |
| Bse3DI | GCAATG | 1 cut(s) | 1023 |
| Bse8I | GATNNNNATC | 1 cut(s) | 181 |
| BseBI | CCWGG | 1 cut(s) | 865 |
| BseCI | ATCGAT | 1 cut(s) | 274 |
| BseDI | CCNNGG | 3 cut(s) | 242, 863, 1226 |
| BseGI | GGATG | 5 cut(s) | 97, 322, 470, 743, 1189 |
| BseJI | GATNNNNATC | 1 cut(s) | 181 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 163, 235, 437, 463, 703, 1155 |
| BseMI | GCAATG | 1 cut(s) | 1023 |
| BseMII | CTCAG | 5 cut(s) | 236, 817, 831, 954, 979 |
| BseNI | ACTGG | 3 cut(s) | 201, 468, 875 |
| BseRI | GAGGAG | 2 cut(s) | 283, 800 |
| BseXI | GCAGC | 1 cut(s) | 1025 |
| BseYI | CCCAGC | 2 cut(s) | 19, 609 |
| Bsh1236I | CGCG | 2 cut(s) | 959, 1028 |
| Bsh1285I | CGRYCG | 1 cut(s) | 998 |
| BshFI | GGCC | 1 cut(s) | 1079 |
| BshVI | ATCGAT | 1 cut(s) | 274 |
| BsiEI | CGRYCG | 1 cut(s) | 998 |
| BsiHKAI | GWGCWC | 2 cut(s) | 9, 512 |
| BsiHKCI | CYCGRG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 1080 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 163, 235, 437, 463, 703, 1155 |
| BsmAI | GTCTC | 3 cut(s) | 124, 614, 782 |
| BsmI | GAATGC | 1 cut(s) | 927 |
| BsnI | GGCC | 1 cut(s) | 1079 |
| BsoBI | CYCGRG | 1 cut(s) | 234 |
| Bsp119I | TTCGAA | 1 cut(s) | 951 |
| Bsp1286I | GDGCHC | 2 cut(s) | 9, 512 |
| Bsp19I | CCATGG | 1 cut(s) | 242 |
| BspACI | CCGC | 4 cut(s) | 154, 397, 912, 1026 |
| BspANI | GGCC | 1 cut(s) | 1079 |
| BspCNI | CTCAG | 5 cut(s) | 235, 816, 830, 953, 978 |
| BspDI | ATCGAT | 1 cut(s) | 274 |
| BspFNI | CGCG | 2 cut(s) | 959, 1028 |
| BspHI | TCATGA | 1 cut(s) | 765 |
| BspLI | GGNNCC | 3 cut(s) | 240, 468, 1078 |
| BspMAI | CTGCAG | 1 cut(s) | 339 |
| BspPI | GGATC | 6 cut(s) | 220, 233, 246, 254, 461, 474 |
| BspT104I | TTCGAA | 1 cut(s) | 951 |
| BspTI | CTTAAG | 1 cut(s) | 1102 |
| BsrDI | GCAATG | 1 cut(s) | 1023 |
| BsrFI | RCCGGY | 1 cut(s) | 1079 |
| BsrI | ACTGG | 3 cut(s) | 201, 468, 875 |
| BssAI | RCCGGY | 1 cut(s) | 1079 |
| BssECI | CCNNGG | 3 cut(s) | 242, 863, 1226 |
| BssSI | CACGAG | 1 cut(s) | 1037 |
| BssT1I | CCWWGG | 2 cut(s) | 242, 1226 |
| Bst2BI | CACGAG | 1 cut(s) | 1037 |
| Bst2UI | CCWGG | 1 cut(s) | 865 |
| Bst4CI | ACNGT | 2 cut(s) | 576, 683 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 612 |
| BstAFI | CTTAAG | 1 cut(s) | 1102 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 606 |
| BstBI | TTCGAA | 1 cut(s) | 951 |
| BstC8I | GCNNGC | 6 cut(s) | 213, 217, 607, 829, 910, 961 |
| BstDEI | CTNAG | 6 cut(s) | 222, 698, 803, 817, 940, 965 |
| BstDSI | CCRYGG | 1 cut(s) | 242 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 701 |
| BstF5I | GGATG | 5 cut(s) | 97, 322, 470, 743, 1189 |
| BstFNI | CGCG | 2 cut(s) | 959, 1028 |
| BstHHI | GCGC | 1 cut(s) | 959 |
| BstMAI | GTCTC | 3 cut(s) | 124, 614, 782 |
| BstMCI | CGRYCG | 1 cut(s) | 998 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 75, 606, 813 |
| BstNI | CCWGG | 1 cut(s) | 865 |
| BstNSI | RCATGY | 2 cut(s) | 733, 912 |
| BstSCI | CCNGG | 1 cut(s) | 863 |
| BstSFI | CTRYAG | 1 cut(s) | 335 |
| BstUI | CGCG | 2 cut(s) | 959, 1028 |
| BstV1I | GCAGC | 1 cut(s) | 1025 |
| BstV2I | GAAGAC | 3 cut(s) | 111, 547, 871 |
| BstX2I | RGATCY | 3 cut(s) | 225, 238, 466 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 901 |
| BstYI | RGATCY | 3 cut(s) | 225, 238, 466 |
| Bsu15I | ATCGAT | 1 cut(s) | 274 |
| Bsu36I | CCTNAGG | 1 cut(s) | 965 |
| BsuI | GTATCC | 1 cut(s) | 433 |
| BsuRI | GGCC | 1 cut(s) | 1079 |
| BsuTUI | ATCGAT | 1 cut(s) | 274 |
| BtgI | CCRYGG | 1 cut(s) | 242 |
| BtgZI | GCGATG | 1 cut(s) | 1043 |
| BtsCI | GGATG | 5 cut(s) | 97, 322, 470, 743, 1189 |
| BtsI | GCAGTG | 1 cut(s) | 600 |
| BtsIMutI | CAGTG | 3 cut(s) | 461, 600, 688 |
| Cac8I | GCNNGC | 6 cut(s) | 213, 217, 607, 829, 910, 961 |
| CaiI | CAGNNNCTG | 2 cut(s) | 377, 1093 |
| CciI | TCATGA | 1 cut(s) | 765 |
| CfoI | GCGC | 1 cut(s) | 959 |
| Cfr10I | RCCGGY | 1 cut(s) | 1079 |
| Cfr13I | GGNCC | 1 cut(s) | 1077 |
| ClaI | ATCGAT | 1 cut(s) | 274 |
| Csp6I | GTAC | 2 cut(s) | 859, 889 |
| CviAII | CATG | 7 cut(s) | 243, 253, 361, 494, 730, 766, 909 |
| CviQI | GTAC | 2 cut(s) | 859, 889 |
| DdeI | CTNAG | 6 cut(s) | 222, 698, 803, 817, 940, 965 |
| DraIII | CACNNNGTG | 1 cut(s) | 846 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 612 |
| EarI | CTCTTC | 2 cut(s) | 35, 612 |
| EciI | GGCGGA | 1 cut(s) | 143 |
| Ecl136II | GAGCTC | 1 cut(s) | 510 |
| Eco130I | CCWWGG | 2 cut(s) | 242, 1226 |
| Eco24I | GRGCYC | 1 cut(s) | 512 |
| Eco53kI | GAGCTC | 1 cut(s) | 510 |
| Eco81I | CCTNAGG | 1 cut(s) | 965 |
| Eco88I | CYCGRG | 1 cut(s) | 234 |
| EcoICRI | GAGCTC | 1 cut(s) | 510 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 701 |
| EcoRI | GAATTC | 1 cut(s) | 944 |
| EcoRII | CCWGG | 1 cut(s) | 863 |
| EcoT14I | CCWWGG | 2 cut(s) | 242, 1226 |
| EcoT38I | GRGCYC | 1 cut(s) | 512 |
| ErhI | CCWWGG | 2 cut(s) | 242, 1226 |
| FaeI | CATG | 7 cut(s) | 246, 256, 364, 497, 733, 769, 912 |
| FatI | CATG | 7 cut(s) | 242, 252, 360, 493, 729, 765, 908 |
| FauI | CCCGC | 1 cut(s) | 1033 |
| FbaI | TGATCA | 2 cut(s) | 526, 1084 |
| Fnu4HI | GCNGC | 1 cut(s) | 1014 |
| FokI | GGATG | 5 cut(s) | 104, 309, 457, 730, 1196 |
| FriOI | GRGCYC | 1 cut(s) | 512 |
| Fsp4HI | GCNGC | 1 cut(s) | 1014 |
| FspBI | CTAG | 1 cut(s) | 53 |
| GlaI | GCGC | 1 cut(s) | 958 |
| GluI | GCNGC | 1 cut(s) | 1014 |
| GsaI | CCCAGC | 2 cut(s) | 23, 613 |
| HaeIII | GGCC | 1 cut(s) | 1079 |
| HapII | CCGG | 1 cut(s) | 1080 |
| HhaI | GCGC | 1 cut(s) | 959 |
| Hin1II | CATG | 7 cut(s) | 246, 256, 364, 497, 733, 769, 912 |
| Hin6I | GCGC | 1 cut(s) | 957 |
| HinP1I | GCGC | 1 cut(s) | 957 |
| HindIII | AAGCTT | 2 cut(s) | 209, 542 |
| HinfI | GANTC | 5 cut(s) | 34, 290, 653, 662, 668 |
| HpaII | CCGG | 1 cut(s) | 1080 |
| HphI | GGTGA | 2 cut(s) | 1094, 1199 |
| Hpy166II | GTNNAC | 2 cut(s) | 691, 1060 |
| Hpy188I | TCNGA | 6 cut(s) | 39, 225, 298, 667, 856, 943 |
| Hpy188III | TCNNGA | 4 cut(s) | 113, 129, 236, 766 |
| Hpy8I | GTNNAC | 2 cut(s) | 691, 1060 |
| HpyAV | CCTTC | 3 cut(s) | 119, 157, 1222 |
| HpyCH4III | ACNGT | 2 cut(s) | 576, 683 |
| HpyCH4IV | ACGT | 1 cut(s) | 714 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 75, 606, 813 |
| HpyF3I | CTNAG | 6 cut(s) | 222, 698, 803, 817, 940, 965 |
| HpySE526I | ACGT | 1 cut(s) | 714 |
| Hsp92II | CATG | 7 cut(s) | 246, 256, 364, 497, 733, 769, 912 |
| HspAI | GCGC | 1 cut(s) | 957 |
| Ksp22I | TGATCA | 2 cut(s) | 526, 1084 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| Lsp1109I | GCAGC | 1 cut(s) | 1025 |
| LweI | GCATC | 2 cut(s) | 200, 383 |
| MaeI | CTAG | 1 cut(s) | 53 |
| MaeII | ACGT | 1 cut(s) | 714 |
| MaeIII | GTNAC | 4 cut(s) | 433, 1032, 1089, 1136 |
| MfeI | CAATTG | 1 cut(s) | 279 |
| MflI | RGATCY | 3 cut(s) | 225, 238, 466 |
| MhlI | GDGCHC | 2 cut(s) | 9, 512 |
| MluCI | AATT | 6 cut(s) | 279, 355, 400, 944, 1008, 1163 |
| MlyI | GAGTC | 2 cut(s) | 284, 662 |
| MmeI | TCCRAC | 2 cut(s) | 372, 450 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MseI | TTAA | 3 cut(s) | 99, 207, 1103 |
| MslI | CAYNNNNRTG | 2 cut(s) | 503, 1039 |
| MspCI | CTTAAG | 1 cut(s) | 1102 |
| MspI | CCGG | 1 cut(s) | 1080 |
| MspR9I | CCNGG | 1 cut(s) | 865 |
| MunI | CAATTG | 1 cut(s) | 279 |
| Mva1269I | GAATGC | 1 cut(s) | 927 |
| MvaI | CCWGG | 1 cut(s) | 865 |
| MvnI | CGCG | 2 cut(s) | 959, 1028 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 75, 606, 813 |
| NcoI | CCATGG | 1 cut(s) | 242 |
| NlaIII | CATG | 7 cut(s) | 246, 256, 364, 497, 733, 769, 912 |
| NlaIV | GGNNCC | 3 cut(s) | 240, 468, 1078 |
| NmeAIII | GCCGAG | 1 cut(s) | 1138 |
| NmuCI | GTSAC | 2 cut(s) | 1032, 1136 |
| NspI | RCATGY | 2 cut(s) | 733, 912 |
| NspV | TTCGAA | 1 cut(s) | 951 |
| OliI | CACNNNNGTG | 1 cut(s) | 1039 |
| PaeI | GCATGC | 1 cut(s) | 912 |
| PagI | TCATGA | 1 cut(s) | 765 |
| PctI | GAATGC | 1 cut(s) | 927 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 3 cut(s) | 34, 653, 662 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1155 |
| PkrI | GCNGC | 1 cut(s) | 1015 |
| Ple19I | CGATCG | 1 cut(s) | 998 |
| PleI | GAGTC | 2 cut(s) | 284, 662 |
| PpsI | GAGTC | 2 cut(s) | 284, 662 |
| PsiI | TTATAA | 1 cut(s) | 540 |
| Psp124BI | GAGCTC | 1 cut(s) | 512 |
| Psp6I | CCWGG | 1 cut(s) | 863 |
| PspFI | CCCAGC | 2 cut(s) | 19, 609 |
| PspGI | CCWGG | 1 cut(s) | 863 |
| PspN4I | GGNNCC | 3 cut(s) | 240, 468, 1078 |
| PspPI | GGNCC | 1 cut(s) | 1077 |
| PstI | CTGCAG | 1 cut(s) | 339 |
| PstNI | CAGNNNCTG | 2 cut(s) | 377, 1093 |
| PsuI | RGATCY | 3 cut(s) | 225, 238, 466 |
| PvuI | CGATCG | 1 cut(s) | 998 |
| RsaI | GTAC | 2 cut(s) | 860, 890 |
| RsaNI | GTAC | 2 cut(s) | 859, 889 |
| RseI | CAYNNNNRTG | 2 cut(s) | 503, 1039 |
| SacI | GAGCTC | 1 cut(s) | 512 |
| SaqAI | TTAA | 3 cut(s) | 99, 207, 1103 |
| SatI | GCNGC | 1 cut(s) | 1014 |
| Sau96I | GGNCC | 1 cut(s) | 1077 |
| ScaI | AGTACT | 1 cut(s) | 890 |
| SchI | GAGTC | 2 cut(s) | 284, 662 |
| ScrFI | CCNGG | 1 cut(s) | 865 |
| SduI | GDGCHC | 2 cut(s) | 9, 512 |
| SfaNI | GCATC | 2 cut(s) | 200, 383 |
| SfcI | CTRYAG | 1 cut(s) | 335 |
| SfuI | TTCGAA | 1 cut(s) | 951 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 503, 1039 |
| SmlI | CTYRAG | 2 cut(s) | 595, 1102 |
| SmoI | CTYRAG | 2 cut(s) | 595, 1102 |
| SphI | GCATGC | 1 cut(s) | 912 |
| Sse9I | AATT | 6 cut(s) | 279, 355, 400, 944, 1008, 1163 |
| SsiI | CCGC | 4 cut(s) | 154, 397, 912, 1026 |
| SspMI | CTAG | 1 cut(s) | 53 |
| SstI | GAGCTC | 1 cut(s) | 512 |
| StyD4I | CCNGG | 1 cut(s) | 863 |
| StyI | CCWWGG | 2 cut(s) | 242, 1226 |
| TaaI | ACNGT | 2 cut(s) | 576, 683 |
| TaiI | ACGT | 1 cut(s) | 717 |
| TaqI | TCGA | 9 cut(s) | 114, 128, 258, 274, 583, 885, 951, 994, 1121 |
| TasI | AATT | 6 cut(s) | 279, 355, 400, 944, 1008, 1163 |
| TatI | WGTACW | 1 cut(s) | 888 |
| TfiI | GAWTC | 3 cut(s) | 34, 653, 662 |
| Tru1I | TTAA | 3 cut(s) | 99, 207, 1103 |
| Tru9I | TTAA | 3 cut(s) | 99, 207, 1103 |
| TscAI | CASTG | 3 cut(s) | 468, 607, 688 |
| TseFI | GTSAC | 2 cut(s) | 1032, 1136 |
| TseI | GCWGC | 1 cut(s) | 1013 |
| Tsp45I | GTSAC | 2 cut(s) | 1032, 1136 |
| TspDTI | ATGAA | 4 cut(s) | 47, 117, 241, 406 |
| TspGWI | ACGGA | 1 cut(s) | 751 |
| TspRI | CASTG | 3 cut(s) | 468, 607, 688 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1155 |
| Vha464I | CTTAAG | 1 cut(s) | 1102 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 701 |
| XapI | RAATTY | 1 cut(s) | 944 |
| XceI | RCATGY | 2 cut(s) | 733, 912 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1177 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 1 cut(s) | 53 |
| ZrmI | AGTACT | 1 cut(s) | 890 |