Prupe.1G401100_v2.0.a1

F-box only protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35414354 .. 35417222
2869 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G401100.1

Sequence Viewer

Length: 1251 bp
ATGGAGGACCAAAATTGCCGGGCTTCTGTGATGACTCGGAAGAGAAAATCCCAAGAAGAAGATAATTGCATTTCAAGCACCTTTTATATGGATGAGCTTAATGAAGACCTCCTGGAAAGGGTCCTCTCAAGGCTACCAACCTCTGCATTCTTCCGCCTTACTTCGGTGTGCAAAAGATGGAAATCGGTTGCATCTTCTCCTAGTTTCAAGCTTGCCTGCTCTCAGATTCCTTCACGGGATCCATGGTTTTTCATGGTCGATCCCCTTCTCAATCGATCAATAGTCTTTGACTCCACTGAAAGAAGCTGGAAAAAACTTAATCATCCACCTCTCCTCCAGAAAAACTCCAACTGCAATTCCATGCCTGTTTCAGCCTCTGGTGGCTTGATCTGTTTCCGAAATTCATATGGCAACTTCATTGTGTGCAACCCCGTGACAGGGTCTTGCAACGAACACCCTCCGCTGGATCCATCCCTACAAAATCTCACCTTCCATGCCATTGTGATGCATTCATGTCCCAAGTATGAGCAGTCCTCTTACAAGCTGCTTGTTGTCTTTGGTGAACTTCCAAAGCTGTCATTCAGAGTGTATAACTCAGACACCGGTTCCTGGGAAGAAGAGACCGCCTTGTGTAAGAAGTTTGATGATGATTCTGCAGAATCTGAATCAAGTGAGGACAATGCTGCTGTTTACTTCCTTAGCAAGGCTGGGAATGTAGTGGCAACCAACATGCAAAGAAGCCCATCTAAGCAATACTCATCAGTGATCACTACTAATAAAGATGGCGAGGAGATAGTCCATTTCCTAAGCTCATCAGGGTCAGTTGTGGCTTGCAATCTGGCCACCAAGTGCTTCTCTGAGTACTCCAGGCTTTTGCCCGTCTTCTTCGAGTACTCCATTGATTTAGTGGAGTGCGGAGGCAGGATGTTAGTGGTTCTGCTGTCAGAATTCTTCGAAAGCGCTAGTCTCAGGGTGTGGTGTTACGATGAGGATGTTCGATCTTGGCACCAAATTGCAGCAATGCCTCCAGCAATGTCCCATGAGTGGTATGGCAAGAATGTGGATATAAACTGTGTAGGGGCTGGTGACCAGATACTGATCTGCTTAAGCTCTGCTGAGATTTCTAGCTGTGTTCTGTGTGACTTGGCTGCCAATGAATGGGTTGAATTGCCCAAATGTTTTATGGATGGTGAAGCCATAAAGTTCATGTCTGCCTTCTCATTTGAGCCAAGGATTGAGGCTTCTGTATGA

Protein Analysis

417

Amino Acids

46.72

Weight (kDa)

5.07

Isoelectric Point (pI)

57.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011756)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1005
AccB7I CCANNNNNTGG 1 cut(s) 1158
AciI CCGC 4 cut(s) 154, 461, 624, 915
AclWI GGATC 5 cut(s) 233, 246, 254, 461, 474
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 2 cut(s) 400, 947
AdeI CACNNNGTG 1 cut(s) 849
AfaI GTAC 2 cut(s) 863, 893
AfeI AGCGCT 1 cut(s) 961
AfiI CCNNNNNNNGG 9 cut(s) 118, 163, 437, 438, 463, 609, 703, 1044, 1158
AflII CTTAAG 1 cut(s) 1105
AgeI ACCGGT 1 cut(s) 602
AgsI TTSAA 3 cut(s) 75, 208, 1166
AjnI CCWGG 3 cut(s) 111, 608, 866
AluBI AGCT 8 cut(s) 97, 211, 306, 544, 574, 810, 1110, 1128
AluI AGCT 8 cut(s) 97, 211, 306, 544, 574, 810, 1110, 1128
Alw26I GTCTC 2 cut(s) 614, 971
AlwI GGATC 5 cut(s) 233, 246, 254, 461, 474
AlwNI CAGNNNCTG 3 cut(s) 377, 662, 1096
Aor51HI AGCGCT 1 cut(s) 961
AoxI GGCC 1 cut(s) 840
ApeKI GCWGC 4 cut(s) 544, 683, 1016, 1148
ApoI RAATTY 2 cut(s) 400, 947
AsiGI ACCGGT 1 cut(s) 602
AspLEI GCGC 1 cut(s) 962
AspS9I GGNCC 2 cut(s) 7, 121
AsuC2I CCSGG 1 cut(s) 20
AsuHPI GGTGA 4 cut(s) 478, 572, 1097, 1202
AsuII TTCGAA 1 cut(s) 954
AvaII GGWCC 2 cut(s) 7, 121
BalI TGGCCA 1 cut(s) 842
BamHI GGATCC 2 cut(s) 238, 466
BanI GGYRCC 1 cut(s) 1005
BbsI GAAGAC 2 cut(s) 111, 874
BbvI GCAGC 4 cut(s) 531, 670, 1028, 1135
BccI CCATC 5 cut(s) 171, 478, 751, 776, 1181
BciT130I CCWGG 3 cut(s) 113, 610, 868
BclI TGATCA 1 cut(s) 765
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 2 cut(s) 614, 971
BfaI CTAG 3 cut(s) 201, 963, 1125
BfmI CTRYAG 1 cut(s) 654
BfoI RGCGCY 1 cut(s) 963
BfrI CTTAAG 1 cut(s) 1105
BisI GCNGC 4 cut(s) 545, 684, 1017, 1149
BlsI GCNGC 4 cut(s) 546, 685, 1018, 1150
BmcAI AGTACT 2 cut(s) 863, 893
Bme1390I CCNGG 4 cut(s) 20, 113, 610, 868
Bme18I GGWCC 2 cut(s) 7, 121
BmgT120I GGNCC 2 cut(s) 7, 121
BmiI GGNNCC 5 cut(s) 122, 240, 468, 607, 1007
BmrFI CCNGG 4 cut(s) 20, 113, 610, 868
BmsI GCATC 2 cut(s) 200, 495
BpiI GAAGAC 2 cut(s) 111, 874
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpmI CTGGAG 3 cut(s) 320, 850, 1011
Bpu10I CCTNAGC 2 cut(s) 698, 806
Bpu14I TTCGAA 1 cut(s) 954
BpuEI CTTGAG 1 cut(s) 112
BpuMI CCSGG 1 cut(s) 20
Bsa29I ATCGAT 1 cut(s) 274
BsaBI GATNNNNATC 2 cut(s) 181, 1097
BsaI GGTCTC 1 cut(s) 614
BsaJI CCNNGG 3 cut(s) 242, 609, 1229
BsaWI WCCGGW 1 cut(s) 602
BsaXI ACNNNNNCTCC 2 cut(s) 318, 348
Bsc4I CCNNNNNNNGG 9 cut(s) 118, 163, 437, 438, 463, 609, 703, 1044, 1158
Bse118I RCCGGY 1 cut(s) 602
Bse3DI GCAATG 2 cut(s) 1026, 1038
Bse8I GATNNNNATC 2 cut(s) 181, 1097
BseBI CCWGG 3 cut(s) 113, 610, 868
BseCI ATCGAT 1 cut(s) 274
BseDI CCNNGG 3 cut(s) 242, 609, 1229
BseGI GGATG 6 cut(s) 97, 322, 470, 930, 997, 1192
BseJI GATNNNNATC 2 cut(s) 181, 1097
BseLI CCNNNNNNNGG 9 cut(s) 118, 163, 437, 438, 463, 609, 703, 1044, 1158
BseMI GCAATG 2 cut(s) 1026, 1038
BseMII CTCAG 5 cut(s) 236, 609, 849, 982, 1107
BseRI GAGGAG 2 cut(s) 323, 803
BseXI GCAGC 4 cut(s) 531, 670, 1028, 1135
BseYI CCCAGC 1 cut(s) 707
BshFI GGCC 1 cut(s) 842
BshNI GGYRCC 1 cut(s) 1005
BshTI ACCGGT 1 cut(s) 602
BshVI ATCGAT 1 cut(s) 274
BsiSI CCGG 2 cut(s) 19, 603
BslFI GGGAC 2 cut(s) 501, 1021
BslI CCNNNNNNNGG 9 cut(s) 118, 163, 437, 438, 463, 609, 703, 1044, 1158
BsmAI GTCTC 2 cut(s) 614, 971
BsmFI GGGAC 2 cut(s) 501, 1021
BsmI GAATGC 2 cut(s) 146, 508
BsnI GGCC 1 cut(s) 842
Bso31I GGTCTC 1 cut(s) 614
Bsp119I TTCGAA 1 cut(s) 954
Bsp143I GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
Bsp19I CCATGG 1 cut(s) 242
BspACI CCGC 4 cut(s) 154, 461, 624, 915
BspANI GGCC 1 cut(s) 842
BspCNI CTCAG 5 cut(s) 235, 608, 850, 981, 1108
BspDI ATCGAT 1 cut(s) 274
BspLI GGNNCC 5 cut(s) 122, 240, 468, 607, 1007
BspMAI CTGCAG 1 cut(s) 658
BspPI GGATC 5 cut(s) 233, 246, 254, 461, 474
BspT104I TTCGAA 1 cut(s) 954
BspT107I GGYRCC 1 cut(s) 1005
BspTI CTTAAG 1 cut(s) 1105
BspTNI GGTCTC 1 cut(s) 614
BsrDI GCAATG 2 cut(s) 1026, 1038
BsrFI RCCGGY 1 cut(s) 602
BssAI RCCGGY 1 cut(s) 602
BssECI CCNNGG 3 cut(s) 242, 609, 1229
BssMI GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
BssT1I CCWWGG 2 cut(s) 242, 1229
Bst2UI CCWGG 3 cut(s) 113, 610, 868
Bst4CI ACNGT 1 cut(s) 1073
Bst6I CTCTTC 2 cut(s) 35, 612
BstAFI CTTAAG 1 cut(s) 1105
BstBI TTCGAA 1 cut(s) 954
BstC8I GCNNGC 3 cut(s) 213, 217, 832
BstDEI CTNAG 8 cut(s) 222, 595, 698, 747, 806, 858, 968, 1116
BstDSI CCRYGG 1 cut(s) 242
BstEII GGTNACC 1 cut(s) 1085
BstENI CCTNNNNNAGG 1 cut(s) 701
BstF5I GGATG 6 cut(s) 97, 322, 470, 930, 997, 1192
BstH2I RGCGCY 1 cut(s) 963
BstHHI GCGC 1 cut(s) 962
BstKTI GATC 8 cut(s) 241, 262, 278, 390, 469, 768, 1001, 1101
BstMAI GTCTC 2 cut(s) 614, 971
BstMBI GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
BstMWI GCNNNNNNNGC 1 cut(s) 75
BstNI CCWGG 3 cut(s) 113, 610, 868
BstNSI RCATGY 1 cut(s) 733
BstPI GGTNACC 1 cut(s) 1085
BstSCI CCNGG 4 cut(s) 18, 111, 608, 866
BstSFI CTRYAG 1 cut(s) 654
BstV1I GCAGC 4 cut(s) 531, 670, 1028, 1135
BstV2I GAAGAC 2 cut(s) 111, 874
BstX2I RGATCY 2 cut(s) 238, 466
BstYI RGATCY 2 cut(s) 238, 466
Bsu15I ATCGAT 1 cut(s) 274
BsuRI GGCC 1 cut(s) 842
BsuTUI ATCGAT 1 cut(s) 274
BtgI CCRYGG 1 cut(s) 242
BtsCI GGATG 6 cut(s) 97, 322, 470, 930, 997, 1192
BtsIMutI CAGTG 2 cut(s) 294, 768
Cac8I GCNNGC 3 cut(s) 213, 217, 832
CaiI CAGNNNCTG 3 cut(s) 377, 662, 1096
CfoI GCGC 1 cut(s) 962
Cfr10I RCCGGY 1 cut(s) 602
Cfr13I GGNCC 2 cut(s) 7, 121
ClaI ATCGAT 1 cut(s) 274
Csp6I GTAC 2 cut(s) 862, 892
CspAI ACCGGT 1 cut(s) 602
CviAII CATG 8 cut(s) 243, 253, 361, 494, 513, 730, 1040, 1207
CviQI GTAC 2 cut(s) 862, 892
DdeI CTNAG 8 cut(s) 222, 595, 698, 747, 806, 858, 968, 1116
DpnI GATC 8 cut(s) 240, 261, 277, 389, 468, 767, 1000, 1100
DpnII GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
DraIII CACNNNGTG 1 cut(s) 849
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 2 cut(s) 35, 612
EarI CTCTTC 2 cut(s) 35, 612
EciI GGCGGA 1 cut(s) 143
Eco130I CCWWGG 2 cut(s) 242, 1229
Eco31I GGTCTC 1 cut(s) 614
Eco47I GGWCC 2 cut(s) 7, 121
Eco47III AGCGCT 1 cut(s) 961
Eco91I GGTNACC 1 cut(s) 1085
EcoNI CCTNNNNNAGG 1 cut(s) 701
EcoO109I RGGNCCY 1 cut(s) 121
EcoO65I GGTNACC 1 cut(s) 1085
EcoRI GAATTC 1 cut(s) 947
EcoRII CCWGG 3 cut(s) 111, 608, 866
EcoT14I CCWWGG 2 cut(s) 242, 1229
EcoT22I ATGCAT 1 cut(s) 510
ErhI CCWWGG 2 cut(s) 242, 1229
FaeI CATG 8 cut(s) 246, 256, 364, 497, 516, 733, 1043, 1210
FaqI GGGAC 2 cut(s) 501, 1021
FatI CATG 8 cut(s) 242, 252, 360, 493, 512, 729, 1039, 1206
FauNDI CATATG 1 cut(s) 406
FbaI TGATCA 1 cut(s) 765
Fnu4HI GCNGC 4 cut(s) 545, 684, 1017, 1149
FokI GGATG 6 cut(s) 104, 309, 457, 937, 1004, 1199
Fsp4HI GCNGC 4 cut(s) 545, 684, 1017, 1149
FspBI CTAG 3 cut(s) 201, 963, 1125
GlaI GCGC 1 cut(s) 961
GluI GCNGC 4 cut(s) 545, 684, 1017, 1149
GsaI CCCAGC 1 cut(s) 711
GsuI CTGGAG 3 cut(s) 320, 850, 1011
HaeII RGCGCY 1 cut(s) 963
HaeIII GGCC 1 cut(s) 842
HapII CCGG 2 cut(s) 19, 603
HhaI GCGC 1 cut(s) 962
Hin1II CATG 8 cut(s) 246, 256, 364, 497, 516, 733, 1043, 1210
Hin6I GCGC 1 cut(s) 960
HinP1I GCGC 1 cut(s) 960
HindIII AAGCTT 1 cut(s) 209
HinfI GANTC 6 cut(s) 34, 226, 290, 650, 659, 665
HpaII CCGG 2 cut(s) 19, 603
HphI GGTGA 4 cut(s) 478, 572, 1097, 1202
Hpy166II GTNNAC 2 cut(s) 563, 691
Hpy188I TCNGA 8 cut(s) 39, 225, 398, 584, 598, 664, 859, 946
Hpy188III TCNNGA 1 cut(s) 337
Hpy8I GTNNAC 2 cut(s) 563, 691
HpyAV CCTTC 4 cut(s) 240, 275, 499, 1225
HpyCH4III ACNGT 1 cut(s) 1073
HpyF10VI GCNNNNNNNGC 1 cut(s) 75
HpyF3I CTNAG 8 cut(s) 222, 595, 698, 747, 806, 858, 968, 1116
Hsp92II CATG 8 cut(s) 246, 256, 364, 497, 516, 733, 1043, 1210
HspAI GCGC 1 cut(s) 960
Ksp22I TGATCA 1 cut(s) 765
Kzo9I GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
Lsp1109I GCAGC 4 cut(s) 531, 670, 1028, 1135
LweI GCATC 2 cut(s) 200, 495
MaeI CTAG 3 cut(s) 201, 963, 1125
MaeIII GTNAC 4 cut(s) 433, 980, 1085, 1139
MalI GATC 8 cut(s) 240, 261, 277, 389, 468, 767, 1000, 1100
MboI GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
MflI RGATCY 2 cut(s) 238, 466
MlsI TGGCCA 1 cut(s) 842
MluCI AATT 7 cut(s) 13, 64, 355, 400, 947, 1011, 1166
MluNI TGGCCA 1 cut(s) 842
MlyI GAGTC 2 cut(s) 28, 284
MmeI TCCRAC 1 cut(s) 372
Mox20I TGGCCA 1 cut(s) 842
Mph1103I ATGCAT 1 cut(s) 510
MscI TGGCCA 1 cut(s) 842
MseI TTAA 3 cut(s) 99, 318, 1106
MslI CAYNNNNRTG 1 cut(s) 503
Msp20I TGGCCA 1 cut(s) 842
MspA1I CMGCKG 1 cut(s) 463
MspCI CTTAAG 1 cut(s) 1105
MspI CCGG 2 cut(s) 19, 603
MspR9I CCNGG 4 cut(s) 20, 113, 610, 868
Mva1269I GAATGC 2 cut(s) 146, 508
MvaI CCWGG 3 cut(s) 113, 610, 868
MwoI GCNNNNNNNGC 1 cut(s) 75
NciI CCSGG 1 cut(s) 20
NcoI CCATGG 1 cut(s) 242
NdeI CATATG 1 cut(s) 406
NdeII GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
NlaIII CATG 8 cut(s) 246, 256, 364, 497, 516, 733, 1043, 1210
NlaIV GGNNCC 5 cut(s) 122, 240, 468, 607, 1007
NmuCI GTSAC 3 cut(s) 433, 1085, 1139
NsiI ATGCAT 1 cut(s) 510
NspI RCATGY 1 cut(s) 733
NspV TTCGAA 1 cut(s) 954
PctI GAATGC 2 cut(s) 146, 508
PfeI GAWTC 4 cut(s) 226, 650, 659, 665
PflFI GACNNNGTC 1 cut(s) 439
PflMI CCANNNNNTGG 1 cut(s) 1158
PfoI TCCNGGA 1 cut(s) 111
PinAI ACCGGT 1 cut(s) 602
PkrI GCNGC 4 cut(s) 546, 685, 1018, 1150
PleI GAGTC 2 cut(s) 28, 284
PpsI GAGTC 2 cut(s) 28, 284
PpuMI RGGWCCY 1 cut(s) 121
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 3 cut(s) 111, 608, 866
PspEI GGTNACC 1 cut(s) 1085
PspFI CCCAGC 1 cut(s) 707
PspGI CCWGG 3 cut(s) 111, 608, 866
PspN4I GGNNCC 5 cut(s) 122, 240, 468, 607, 1007
PspPI GGNCC 2 cut(s) 7, 121
PspPPI RGGWCCY 1 cut(s) 121
PstI CTGCAG 1 cut(s) 658
PstNI CAGNNNCTG 3 cut(s) 377, 662, 1096
PsuI RGATCY 2 cut(s) 238, 466
PsyI GACNNNGTC 1 cut(s) 439
RsaI GTAC 2 cut(s) 863, 893
RsaNI GTAC 2 cut(s) 862, 892
RseI CAYNNNNRTG 1 cut(s) 503
SaqAI TTAA 3 cut(s) 99, 318, 1106
SatI GCNGC 4 cut(s) 545, 684, 1017, 1149
Sau3AI GATC 8 cut(s) 238, 259, 275, 387, 466, 765, 998, 1098
Sau96I GGNCC 2 cut(s) 7, 121
ScaI AGTACT 2 cut(s) 863, 893
SchI GAGTC 2 cut(s) 28, 284
ScrFI CCNGG 4 cut(s) 20, 113, 610, 868
SfaNI GCATC 2 cut(s) 200, 495
SfcI CTRYAG 1 cut(s) 654
SfuI TTCGAA 1 cut(s) 954
SinI GGWCC 2 cut(s) 7, 121
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 2 cut(s) 127, 1105
SmoI CTYRAG 2 cut(s) 127, 1105
Sse9I AATT 7 cut(s) 13, 64, 355, 400, 947, 1011, 1166
SsiI CCGC 4 cut(s) 154, 461, 624, 915
SspMI CTAG 3 cut(s) 201, 963, 1125
StyD4I CCNGG 4 cut(s) 18, 111, 608, 866
StyI CCWWGG 2 cut(s) 242, 1229
TaaI ACNGT 1 cut(s) 1073
TaqI TCGA 5 cut(s) 258, 274, 888, 954, 997
TasI AATT 7 cut(s) 13, 64, 355, 400, 947, 1011, 1166
TatI WGTACW 2 cut(s) 861, 891
TfiI GAWTC 4 cut(s) 226, 650, 659, 665
Tru1I TTAA 3 cut(s) 99, 318, 1106
Tru9I TTAA 3 cut(s) 99, 318, 1106
TscAI CASTG 2 cut(s) 301, 768
TseFI GTSAC 3 cut(s) 433, 1085, 1139
TseI GCWGC 4 cut(s) 544, 683, 1016, 1148
Tsp45I GTSAC 3 cut(s) 433, 1085, 1139
TspDTI ATGAA 7 cut(s) 117, 241, 393, 406, 501, 1170, 1195
TspRI CASTG 2 cut(s) 301, 768
Tth111I GACNNNGTC 1 cut(s) 439
Van91I CCANNNNNTGG 1 cut(s) 1158
Vha464I CTTAAG 1 cut(s) 1105
VpaK11BI GGWCC 2 cut(s) 7, 121
XagI CCTNNNNNAGG 1 cut(s) 701
XapI RAATTY 2 cut(s) 400, 947
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 3 cut(s) 904, 1046, 1180
XspI CTAG 3 cut(s) 201, 963, 1125
ZrmI AGTACT 2 cut(s) 863, 893
Zsp2I ATGCAT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.