FvH4_2g37350

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0004467
Physical Location & Seq
Forward (+)
27217002 .. 27219630
2629 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37350.t1

Sequence Viewer

Length: 1890 bp
ATGGTGATGGATGGAGAGGAGAGAGACGGAGGCGGCGAAACGGCGGAGGATGTTATCCAACAGGTGGAGAGTGTTATTCAATCGGCAGCGAGTTTTGGAGAGTACCGGAGGACGCAGAGAAAAGAATGTTATAACCTTCTGAGGCGTATGAGGCTTTTGTTGCCGCTATTCGAAGAGGTACGAGAGCTTGAAAGCCCGGTTACGGATAAGGGTATCGATTGGATGCTGGAGTTGAAGAAGGTGCTTGTTATGGCCAAGAAGTTGCTCAAGTTTTGTCACAAAGGCAGCAAAATTTATTTGGCAATTGAAAGTGAGGCAGTCATGATTAGATTTCATGGTGTTCATGACAAACTCACTCAGACTTTGGATGATTTGCCTGATGAGCTTTGTATTTCAGATGAATTTAGAGAACAGATTGGCCTCATGGTGATGCAACTGAAACGAGCAAGGAAGCGAACAGATACACAAGATATAGAACTTGCAATGGATATAATGGTGGTGTTGTCGAAAAAAGATGAGAGAAATGCTGATAGTGCCATAATAGAAAGGCTGGCGCAAAAGCTACAGCTGCATACAGTTGAGGACCTGAAAATGGAAACAATTACTGTAAGGAACCTTATTAAAGAAAGAGGAGGGGTTAGTGCAGAAACTTATCAGCAAGTCATCGATCTTCTTAACAAATTCAGACAACTTGCAGGAATGGAAGTAACCAATGTTGTCGATGAGCCTGTTGTGCCGAAAATGCTCAAGTGCCCATCTTTGGTGATCCCTCATGAGTTTCTTTGTCCAATCACACTGGAAATAATGACTGATCCTGTGATTGTTGCAAGTGGACAGACATATGACAGAGAAAGCATACAGAAGTGGTTCGACACCAATCACAAGACATGTCCAAAAACGAGGGAACTTCTGCCTCATCTGTCAGTAGCACCAAACTATGCTCTCAAAACTCTAATCCTGCAGTGGTGCGAGAAGAACAAGTTCAAGCTTCCGGAAAAGGAAGCTTCCCAGGGCCAGGAAAGCTCCTCCACGGTGGACAAAGAGGAGATTTCATCCCTGGTTGAAAAGCTATCTTCCAGTCAATTAGAAGTACAGAGGAAGGCTGCCATGAAAATTCGTTTGCTCTCAAAAGAGAATCCCGAGAACAGAATTTTGATTGCGCAAAGTGGAGGAATCCCACCATTAGTTCAACTTCTTTCCTATCCAGACTCTAAAATTAAACAGCATGCAGTGACAGCTCTACTGAACTTATCAATTGACGAAACAAACAAGAAGCTCATAACCAGAGAAGACGCCATACCAGCTATTATAGAAGTCTTGAAGACCGGAAGCACAGAAGCTAGAGAGAACTCTGCAGCAGCTCTATTTAGCTTATCAATGCTTGATGAGAACAAAGTTAAAGTAGGATTATCAGACGGCATTCCACCATTAGTAGAGTTATTGCAAACTGGGACAATTAGAGGTAAAAAGGATGCTGCAACTGCGTTGTTCAACTTATCATTGAACCAAGCAAACAAGGCAAGGGCCATCAGTGCCGGCATTGTACCGCCTCTACTCAAGGTACTCAAGGACAGAAACTTGGGGATGGTGGATGAGTCTCTCTCCATCTTCTTGCTTCTTGCGTCACACCCAGATGGACGGCAAGCCATCGGAGAGTTCTCATTCATCGAAACTCTTGTTGAGTTTATCCGAGAAGGAACCCCCAAGAACAAAGAATGCGCAGCATCAGTACTCCTAGAGTTGGGATCAAACAACTCATCTTTCTTGCTCGCCTCACTTCAGTATGGAGTATATGAGGATTTGGTTGAGATCACAAATAGTGGAACCAATAGAGCTCAAAGGAAGGCAAGAGCACTCTTACAACTCATTAGCAAATGTGAACACGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

630

Amino Acids

70.44

Weight (kDa)

5.97

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB10_N PF25368 40 - 149 1.1e-31 PUB10-like, N-terminal domain
U-box PF04564 256 - 327 3.4e-24 U-box domain
ARM_ARMC5 PF24768 339 - 525 4.2e-11 ARMC5
Arm_2 PF04826 347 - 513 4.5e-07 Armadillo-like
ARM_PUB PF25598 349 - 624 2.2e-21 Plant U-box protein ARM repeat region
Arm PF00514 379 - 418 3.9e-11 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 381 - 572 1.9e-13 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 132
Acc16I TGCGCA 2 cut(s) 1161, 1720
AccB7I CCANNNNNTGG 1 cut(s) 64
AccIII TCCGGA 1 cut(s) 991
AciI CCGC 4 cut(s) 33, 44, 164, 1547
AclWI GGATC 3 cut(s) 760, 806, 1753
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 5 cut(s) 291, 401, 680, 1113, 1149
AcuI CTGAAG 1 cut(s) 1763
AcyI GRCGYC 1 cut(s) 1293
AfaI GTAC 6 cut(s) 104, 180, 1092, 1545, 1563, 1731
AfiI CCNNNNNNNGG 6 cut(s) 64, 202, 592, 760, 1015, 1741
AflIII ACRYGT 2 cut(s) 887, 1882
AjnI CCWGG 3 cut(s) 1008, 1014, 1056
Alw21I GWGCWC 2 cut(s) 1837, 1855
Alw26I GTCTC 2 cut(s) 18, 1602
AlwI GGATC 3 cut(s) 760, 806, 1753
Ama87I CYCGRG 1 cut(s) 1139
Aor13HI TCCGGA 1 cut(s) 991
AoxI GGCC 4 cut(s) 252, 418, 1012, 1524
ApeKI GCWGC 8 cut(s) 86, 285, 568, 1103, 1355, 1358, 1475, 1721
ApoI RAATTY 5 cut(s) 291, 401, 680, 1113, 1149
Asp700I GAANNNNTTC 2 cut(s) 866, 980
AspLEI GCGC 3 cut(s) 556, 1162, 1721
AspS9I GGNCC 3 cut(s) 583, 1012, 1524
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 3 cut(s) 16, 439, 775
AsuII TTCGAA 1 cut(s) 171
AvaI CYCGRG 1 cut(s) 1139
AvaII GGWCC 1 cut(s) 583
BaeGI GKGCMC 1 cut(s) 755
BalI TGGCCA 1 cut(s) 254
BanII GRGCYC 1 cut(s) 1837
BarI GAAGNNNNNNTAC 2 cut(s) 1281, 1313
BbsI GAAGAC 2 cut(s) 1296, 1328
Bbv12I GWGCWC 2 cut(s) 1837, 1855
BbvI GCAGC 8 cut(s) 98, 297, 555, 1090, 1367, 1370, 1462, 1733
BccI CCATC 7 cut(s) 5, 763, 1535, 1579, 1613, 1628, 1655
BceAI ACGGC 3 cut(s) 57, 1432, 1655
BciT130I CCWGG 3 cut(s) 1010, 1016, 1058
BcnI CCSGG 1 cut(s) 197
BcoDI GTCTC 2 cut(s) 18, 1602
BfaI CTAG 2 cut(s) 1341, 1736
BfmI CTRYAG 3 cut(s) 563, 959, 1353
BmcAI AGTACT 1 cut(s) 1731
Bme1390I CCNGG 4 cut(s) 197, 1010, 1016, 1058
Bme18I GGWCC 1 cut(s) 583
BmeT110I CYCGRG 1 cut(s) 1139
BmgT120I GGNCC 3 cut(s) 583, 1012, 1524
BmiI GGNNCC 3 cut(s) 614, 1699, 1825
BmrFI CCNGG 4 cut(s) 197, 1010, 1016, 1058
BmrI ACTGGG 1 cut(s) 1458
BmsI GCATC 4 cut(s) 213, 420, 1462, 1733
BmuI ACTGGG 1 cut(s) 1458
BpiI GAAGAC 2 cut(s) 1296, 1328
BplI GAGNNNNNCTC 2 cut(s) 1586, 1618
BpmI CTGGAG 1 cut(s) 248
Bpu14I TTCGAA 1 cut(s) 171
BpuEI CTTGAG 4 cut(s) 251, 731, 1541, 1550
BpuMI CCSGG 1 cut(s) 197
Bsa29I ATCGAT 2 cut(s) 216, 666
BsaHI GRCGYC 1 cut(s) 1293
BsaJI CCNNGG 4 cut(s) 1008, 1009, 1029, 1056
BsaWI WCCGGW 3 cut(s) 105, 991, 1325
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 202, 592, 760, 1015, 1741
Bse118I RCCGGY 1 cut(s) 1535
Bse1I ACTGG 3 cut(s) 801, 1077, 1453
Bse3DI GCAATG 1 cut(s) 489
BseAI TCCGGA 1 cut(s) 991
BseBI CCWGG 3 cut(s) 1010, 1016, 1058
BseCI ATCGAT 2 cut(s) 216, 666
BseDI CCNNGG 4 cut(s) 1008, 1009, 1029, 1056
BseGI GGATG 8 cut(s) 16, 55, 228, 373, 1052, 1477, 1590, 1597
BseLI CCNNNNNNNGG 6 cut(s) 64, 202, 592, 760, 1015, 1741
BseMI GCAATG 1 cut(s) 489
BseMII CTCAG 2 cut(s) 131, 371
BseNI ACTGG 3 cut(s) 801, 1077, 1453
BseRI GAGGAG 4 cut(s) 32, 645, 1015, 1058
BseSI GKGCMC 1 cut(s) 755
BseXI GCAGC 8 cut(s) 98, 297, 555, 1090, 1367, 1370, 1462, 1733
BsgI GTGCAG 1 cut(s) 663
BshFI GGCC 4 cut(s) 254, 420, 1014, 1526
BshVI ATCGAT 2 cut(s) 216, 666
BsiHKAI GWGCWC 2 cut(s) 1837, 1855
BsiHKCI CYCGRG 1 cut(s) 1139
BsiSI CCGG 5 cut(s) 106, 197, 992, 1326, 1536
BslFI GGGAC 1 cut(s) 1465
BslI CCNNNNNNNGG 6 cut(s) 64, 202, 592, 760, 1015, 1741
BsmAI GTCTC 2 cut(s) 18, 1602
BsmBI CGTCTC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 1465
BsmI GAATGC 2 cut(s) 1419, 1721
BsnI GGCC 4 cut(s) 254, 420, 1014, 1526
BsoBI CYCGRG 1 cut(s) 1139
Bsp119I TTCGAA 1 cut(s) 171
Bsp1286I GDGCHC 3 cut(s) 755, 1837, 1855
Bsp13I TCCGGA 1 cut(s) 991
Bsp143I GATC 5 cut(s) 667, 765, 811, 1745, 1809
BspACI CCGC 4 cut(s) 33, 44, 164, 1547
BspANI GGCC 4 cut(s) 254, 420, 1014, 1526
BspCNI CTCAG 2 cut(s) 132, 370
BspDI ATCGAT 2 cut(s) 216, 666
BspEI TCCGGA 1 cut(s) 991
BspHI TCATGA 3 cut(s) 321, 343, 772
BspLI GGNNCC 3 cut(s) 614, 1699, 1825
BspMAI CTGCAG 2 cut(s) 963, 1357
BspPI GGATC 3 cut(s) 760, 806, 1753
BspT104I TTCGAA 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 489
BsrFI RCCGGY 1 cut(s) 1535
BsrI ACTGG 3 cut(s) 801, 1077, 1453
BssAI RCCGGY 1 cut(s) 1535
BssECI CCNNGG 4 cut(s) 1008, 1009, 1029, 1056
BssMI GATC 5 cut(s) 667, 765, 811, 1745, 1809
BssNI GRCGYC 1 cut(s) 1293
Bst2UI CCWGG 3 cut(s) 1010, 1016, 1058
Bst4CI ACNGT 3 cut(s) 577, 607, 1033
Bst6I CTCTTC 1 cut(s) 168
BstACI GRCGYC 1 cut(s) 1293
BstBI TTCGAA 1 cut(s) 171
BstC8I GCNNGC 5 cut(s) 552, 1227, 1537, 1644, 1770
BstDEI CTNAG 2 cut(s) 140, 357
BstDSI CCRYGG 1 cut(s) 1029
BstF5I GGATG 8 cut(s) 16, 55, 228, 373, 1052, 1477, 1590, 1597
BstHHI GCGC 3 cut(s) 556, 1162, 1721
BstKTI GATC 5 cut(s) 670, 768, 814, 1748, 1812
BstMAI GTCTC 2 cut(s) 18, 1602
BstMBI GATC 5 cut(s) 667, 765, 811, 1745, 1809
BstNI CCWGG 3 cut(s) 1010, 1016, 1058
BstNSI RCATGY 2 cut(s) 891, 1229
BstSCI CCNGG 4 cut(s) 195, 1008, 1014, 1056
BstSFI CTRYAG 3 cut(s) 563, 959, 1353
BstSLI GKGCMC 1 cut(s) 755
BstV1I GCAGC 8 cut(s) 98, 297, 555, 1090, 1367, 1370, 1462, 1733
BstV2I GAAGAC 2 cut(s) 1296, 1328
Bsu15I ATCGAT 2 cut(s) 216, 666
BsuRI GGCC 4 cut(s) 254, 420, 1014, 1526
BsuTUI ATCGAT 2 cut(s) 216, 666
BtgI CCRYGG 1 cut(s) 1029
BtsCI GGATG 8 cut(s) 16, 55, 228, 373, 1052, 1477, 1590, 1597
BtsI GCAGTG 2 cut(s) 968, 1236
BtsIMutI CAGTG 4 cut(s) 794, 968, 1236, 1537
Cac8I GCNNGC 5 cut(s) 552, 1227, 1537, 1644, 1770
CciI TCATGA 3 cut(s) 321, 343, 772
CfoI GCGC 3 cut(s) 556, 1162, 1721
Cfr10I RCCGGY 1 cut(s) 1535
Cfr13I GGNCC 3 cut(s) 583, 1012, 1524
ClaI ATCGAT 2 cut(s) 216, 666
CseI GACGC 3 cut(s) 121, 1301, 1611
Csp6I GTAC 6 cut(s) 103, 179, 1091, 1544, 1562, 1730
CviAII CATG 8 cut(s) 322, 335, 344, 424, 773, 888, 1108, 1226
CviQI GTAC 6 cut(s) 103, 179, 1091, 1544, 1562, 1730
DdeI CTNAG 2 cut(s) 140, 357
DpnI GATC 5 cut(s) 669, 767, 813, 1747, 1811
DpnII GATC 5 cut(s) 667, 765, 811, 1745, 1809
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
EciI GGCGGA 1 cut(s) 59
Ecl136II GAGCTC 1 cut(s) 1835
Eco24I GRGCYC 1 cut(s) 1837
Eco47I GGWCC 1 cut(s) 583
Eco53kI GAGCTC 1 cut(s) 1835
Eco57I CTGAAG 1 cut(s) 1763
Eco88I CYCGRG 1 cut(s) 1139
EcoICRI GAGCTC 1 cut(s) 1835
EcoO109I RGGNCCY 1 cut(s) 583
EcoRII CCWGG 3 cut(s) 1008, 1014, 1056
EcoT38I GRGCYC 1 cut(s) 1837
Esp3I CGTCTC 1 cut(s) 18
FaeI CATG 8 cut(s) 325, 338, 347, 427, 776, 891, 1111, 1229
FaqI GGGAC 1 cut(s) 1465
FatI CATG 8 cut(s) 321, 334, 343, 423, 772, 887, 1107, 1225
FauNDI CATATG 1 cut(s) 841
FokI GGATG 8 cut(s) 23, 62, 235, 380, 1039, 1484, 1597, 1604
FriOI GRGCYC 1 cut(s) 1837
FspBI CTAG 2 cut(s) 1341, 1736
FspI TGCGCA 2 cut(s) 1161, 1720
GlaI GCGC 3 cut(s) 555, 1161, 1720
GsuI CTGGAG 1 cut(s) 248
HaeIII GGCC 4 cut(s) 254, 420, 1014, 1526
HapII CCGG 5 cut(s) 106, 197, 992, 1326, 1536
HgaI GACGC 3 cut(s) 121, 1301, 1611
HhaI GCGC 3 cut(s) 556, 1162, 1721
Hin1I GRCGYC 1 cut(s) 1293
Hin1II CATG 8 cut(s) 325, 338, 347, 427, 776, 891, 1111, 1229
Hin6I GCGC 3 cut(s) 554, 1160, 1719
HinP1I GCGC 3 cut(s) 554, 1160, 1719
HindIII AAGCTT 2 cut(s) 986, 1002
HinfI GANTC 4 cut(s) 1135, 1173, 1208, 1595
HpaII CCGG 5 cut(s) 106, 197, 992, 1326, 1536
HphI GGTGA 3 cut(s) 16, 439, 775
Hpy166II GTNNAC 3 cut(s) 833, 1036, 1880
Hpy188I TCNGA 7 cut(s) 141, 360, 397, 686, 1414, 1652, 1691
Hpy188III TCNNGA 7 cut(s) 322, 344, 773, 992, 1139, 1205, 1318
Hpy8I GTNNAC 3 cut(s) 833, 1036, 1880
HpyAV CCTTC 5 cut(s) 146, 232, 1093, 1688, 1837
HpyCH4III ACNGT 3 cut(s) 577, 607, 1033
HpyCH4IV ACGT 1 cut(s) 1884
HpyF3I CTNAG 2 cut(s) 140, 357
HpySE526I ACGT 1 cut(s) 1884
Hsp92I GRCGYC 1 cut(s) 1293
Hsp92II CATG 8 cut(s) 325, 338, 347, 427, 776, 891, 1111, 1229
HspAI GCGC 3 cut(s) 554, 1160, 1719
Kpn2I TCCGGA 1 cut(s) 991
KroI GCCGGC 1 cut(s) 1535
KroNI GCCGGC 1 cut(s) 1537
Kzo9I GATC 5 cut(s) 667, 765, 811, 1745, 1809
LmnI GCTCC 1 cut(s) 1028
Lsp1109I GCAGC 8 cut(s) 98, 297, 555, 1090, 1367, 1370, 1462, 1733
LweI GCATC 4 cut(s) 213, 420, 1462, 1733
MaeI CTAG 2 cut(s) 1341, 1736
MaeII ACGT 1 cut(s) 1884
MaeIII GTNAC 5 cut(s) 199, 275, 706, 1231, 1623
MalI GATC 5 cut(s) 669, 767, 813, 1747, 1811
MboI GATC 5 cut(s) 667, 765, 811, 1745, 1809
MboII GAAGA 8 cut(s) 185, 247, 662, 985, 1065, 1301, 1333, 1600
MfeI CAATTG 2 cut(s) 303, 1254
MhlI GDGCHC 3 cut(s) 755, 1837, 1855
MlsI TGGCCA 1 cut(s) 254
MluNI TGGCCA 1 cut(s) 254
MlyI GAGTC 2 cut(s) 1202, 1604
MmeI TCCRAC 1 cut(s) 82
Mox20I TGGCCA 1 cut(s) 254
MroI TCCGGA 1 cut(s) 991
MroNI GCCGGC 1 cut(s) 1535
MroXI GAANNNNTTC 2 cut(s) 866, 980
MscI TGGCCA 1 cut(s) 254
MseI TTAA 5 cut(s) 621, 675, 1218, 1398, 1888
MslI CAYNNNNRTG 2 cut(s) 428, 1632
Msp20I TGGCCA 1 cut(s) 254
MspA1I CMGCKG 1 cut(s) 568
MspI CCGG 5 cut(s) 106, 197, 992, 1326, 1536
MspR9I CCNGG 4 cut(s) 197, 1010, 1016, 1058
MunI CAATTG 2 cut(s) 303, 1254
Mva1269I GAATGC 2 cut(s) 1419, 1721
MvaI CCWGG 3 cut(s) 1010, 1016, 1058
NaeI GCCGGC 1 cut(s) 1537
NciI CCSGG 1 cut(s) 197
NdeI CATATG 1 cut(s) 841
NdeII GATC 5 cut(s) 667, 765, 811, 1745, 1809
NgoMIV GCCGGC 1 cut(s) 1535
NlaIII CATG 8 cut(s) 325, 338, 347, 427, 776, 891, 1111, 1229
NlaIV GGNNCC 3 cut(s) 614, 1699, 1825
NmuCI GTSAC 3 cut(s) 275, 1231, 1623
NsbI TGCGCA 2 cut(s) 1161, 1720
NspI RCATGY 2 cut(s) 891, 1229
NspV TTCGAA 1 cut(s) 171
PaeI GCATGC 1 cut(s) 1229
PagI TCATGA 3 cut(s) 321, 343, 772
PasI CCCWGGG 1 cut(s) 1009
PciI ACATGT 1 cut(s) 887
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 2 cut(s) 1419, 1721
PdiI GCCGGC 1 cut(s) 1537
PdmI GAANNNNTTC 2 cut(s) 866, 980
PfeI GAWTC 2 cut(s) 1135, 1173
PflMI CCANNNNNTGG 1 cut(s) 64
PleI GAGTC 2 cut(s) 1202, 1603
PpsI GAGTC 2 cut(s) 1202, 1603
PpuMI RGGWCCY 1 cut(s) 583
PscI ACATGT 1 cut(s) 887
PsiI TTATAA 1 cut(s) 132
Psp124BI GAGCTC 1 cut(s) 1837
Psp5II RGGWCCY 1 cut(s) 583
Psp6I CCWGG 3 cut(s) 1008, 1014, 1056
PspGI CCWGG 3 cut(s) 1008, 1014, 1056
PspN4I GGNNCC 3 cut(s) 614, 1699, 1825
PspPI GGNCC 3 cut(s) 583, 1012, 1524
PspPPI RGGWCCY 1 cut(s) 583
PstI CTGCAG 2 cut(s) 963, 1357
PvuII CAGCTG 1 cut(s) 568
RsaI GTAC 6 cut(s) 104, 180, 1092, 1545, 1563, 1731
RsaNI GTAC 6 cut(s) 103, 179, 1091, 1544, 1562, 1730
RseI CAYNNNNRTG 2 cut(s) 428, 1632
SacI GAGCTC 1 cut(s) 1837
SaqAI TTAA 5 cut(s) 621, 675, 1218, 1398, 1888
Sau3AI GATC 5 cut(s) 667, 765, 811, 1745, 1809
Sau96I GGNCC 3 cut(s) 583, 1012, 1524
ScaI AGTACT 1 cut(s) 1731
SchI GAGTC 2 cut(s) 1202, 1604
ScrFI CCNGG 4 cut(s) 197, 1010, 1016, 1058
SduI GDGCHC 3 cut(s) 755, 1837, 1855
SfaNI GCATC 4 cut(s) 213, 420, 1462, 1733
SfcI CTRYAG 3 cut(s) 563, 959, 1353
SfuI TTCGAA 1 cut(s) 171
SinI GGWCC 1 cut(s) 583
SmiMI CAYNNNNRTG 2 cut(s) 428, 1632
SmlI CTYRAG 4 cut(s) 266, 746, 1556, 1565
SmoI CTYRAG 4 cut(s) 266, 746, 1556, 1565
SphI GCATGC 1 cut(s) 1229
SsiI CCGC 4 cut(s) 33, 44, 164, 1547
SspMI CTAG 2 cut(s) 1341, 1736
SstI GAGCTC 1 cut(s) 1837
StyD4I CCNGG 4 cut(s) 195, 1008, 1014, 1056
TaaI ACNGT 3 cut(s) 577, 607, 1033
TaiI ACGT 1 cut(s) 1887
TaqI TCGA 7 cut(s) 171, 216, 506, 666, 720, 870, 1668
TatI WGTACW 2 cut(s) 1090, 1729
TauI GCSGC 2 cut(s) 36, 166
TfiI GAWTC 2 cut(s) 1135, 1173
Tru1I TTAA 5 cut(s) 621, 675, 1218, 1398, 1888
Tru9I TTAA 5 cut(s) 621, 675, 1218, 1398, 1888
TscAI CASTG 4 cut(s) 801, 968, 1236, 1537
TseFI GTSAC 3 cut(s) 275, 1231, 1623
TseI GCWGC 8 cut(s) 86, 285, 568, 1103, 1355, 1358, 1475, 1721
Tsp45I GTSAC 3 cut(s) 275, 1231, 1623
TspDTI ATGAA 6 cut(s) 323, 332, 414, 1041, 1124, 1654
TspGWI ACGGA 2 cut(s) 42, 218
TspRI CASTG 4 cut(s) 801, 968, 1236, 1537
Van91I CCANNNNNTGG 1 cut(s) 64
VpaK11BI GGWCC 1 cut(s) 583
XapI RAATTY 5 cut(s) 291, 401, 680, 1113, 1149
XceI RCATGY 2 cut(s) 891, 1229
XmnI GAANNNNTTC 2 cut(s) 866, 980
XspI CTAG 2 cut(s) 1341, 1736
ZrmI AGTACT 1 cut(s) 1731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.