Rh6DG443300

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0004467
Physical Location & Seq
Reverse (-)
61844621 .. 61846818
2198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG443300.1

Sequence Viewer

Length: 1914 bp
ATGGTGATGGATGGAGAGAGAGAGGGATGTGAAGGTGAAGGATGTGGAGGCGGCGGAGAGGAAACGGCGGAGGGTTTGATTCAATCGTTGGAGAGCGTGATTCAATCGGCGGCTCGATTAGGAGAGTACCGGAGGACGCAGAGAAAAGAATGTTACAACCTTCTGAGGCGTATGAAGCTTTTGTTGCCGCTTTTCGAAGAGGTACGAGAGCTCGAAGGCCCGGTTCCGGAGAGCGTTGTTGTTTGGATGGTGGATCTGAAGAAGGTTCTTGTCATGGCCAAGAAATTGCTCAAGTTTTGTCACGAGGACAGCAAAATTTATCTGGCAATTGAAAGTGACGCAGTCATGGTTAGATTTCATGCGGTTCATGACAAACTCACTCTGGCTTTGGATAGTGTGCCTGATGAGCTTGGTATCTCAGACGAAATCAGAGAACAGATTGACCTCATGGTGAGGCAACTTAAACGAGCAAGGAAGCGAACAGATACACAAGATATAGAACTTGCAATGGATATAATGGTGGTTTTGGAGAAAAAACATGACAGAAATGCTGATAGTGCCATAATAGAAAGGCTGGCGCAAAAGCTAGAGCTGCATACAGTTGAGGACCTGAAAATAGAAACAATTACTGTAAGGAACCTTGTTAAAGAAAGAGGAGGGATTAGTGCAGAAACTTCTCAGCAAGTCATCGATCTTCTTAACAAATTCAGACTACTTGCAGGAATGGAAGTAACCAATGTTGTCGATGAACCTGTTGTGCCGAAAATGCTCAAGTGTCCATCTTTGGTGATCCCTCATGAGTTTCTTTGTCCAATCACACTGGAAGTAATGACTGATCCTGTGATTGTCGCGAGTGGACAGACATATGACAGAGAAAGCATACAAAAGTGGTTCGACTCCAATCATGCGACATGTCCAAAAACGAGGGTAACTCTGCCTCACCTGTCAGTAGCGCCAAACTATGCTCTCAAAAATCTAATCCAGCAGTGGTGCGAGAAGAACAAGTTCAAGCTTCCAGTAAAGGAAGCTTCCCAGGACCAGGAAAGCTCCTCCTCCGAGCACAAAGAGGAGATCACAACCCTGGTTGAAAAGCTATCGTCCTGTCAATTAGAAGTGCAAAGGAAGGCTGCCATGAAAATTCGTTTGCTCTCAAAAGAGAATCCCGAGAACAGAATTTTGATTGCGCAAAGTGGAGGAATCCCACCCTTAGTGCAACTTCTTTCCTATCCGGACTCTAAAATTCAACAGCATGCAGTGACAGCTCTACTAAACCTATCAATTGATGAAACAAACAAGAAGCTCATAACCAGAGAAGAGGCCATTCCAGCTATTATAGAAGTCTTGAAGACTGGAAGCACAGAAGCTAGAGAGAACTCTGCAGCAGCTTTGTTTAGCTTATCGATGCAAGATGAGAACAAAGTAAAAATAGGATTATCAGACGGCATTCCACCATTAGTAGATTTATTGCAAAATGGGACAATTAGAGGTAAAAAAGATGCTGCAACTGCATTGTTCAACTTATCTTTGAACCAAGCAAACAAGGCAAGGGCCATCAGTGCTGGCATTGTACCGCCTCTACTCAAGGTACTCAAGGACAGAAACTTGGGAATGGTGGATGAGTCTCTCTCCATCTTCTTGCTTCTTGCATCACACCCAGATGGACGGCAAGAGATTGGACAGCTCTCATTCATCGAGACTCTTGTTGACTTTATTCGAGAAGGAACCCCCAAGAACAAGGAATGTGCAACATCAGTACTTCTCGAGTTGGGGTCAAACAATTCATCTTTCTTACTCGCCTCACTTCAGTATGGAGTATATGAGCATTTGGTTGAGATCACAAAGAGTGGAACCAATAGAGCTCAAAGAAAGGCAAAAGCACTCCTACAACTCATAAGCAAATGTGAACATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

637

Amino Acids

71.02

Weight (kDa)

5.94

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB10_N PF25368 48 - 157 3.6e-33 PUB10-like, N-terminal domain
U-box PF04564 264 - 335 8.2e-25 U-box domain
ARM_ARMC5 PF24768 344 - 535 2.5e-12 ARMC5
ARM_PUB PF25598 357 - 632 4.8e-22 Plant U-box protein ARM repeat region
Arm_2 PF04826 357 - 521 7.9e-06 Armadillo-like
Arm PF00514 387 - 426 1e-11 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 424 - 580 1.7e-09 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1185
AccII CGCG 1 cut(s) 851
AccIII TCCGGA 2 cut(s) 226, 1228
AciI CCGC 7 cut(s) 51, 54, 68, 110, 188, 362, 1571
AclWI GGATC 3 cut(s) 261, 784, 830
AcoI YGGCCR 1 cut(s) 276
AcsI RAATTY 5 cut(s) 315, 704, 1137, 1173, 1239
AcuI CTGAAG 2 cut(s) 278, 1787
AfaI GTAC 5 cut(s) 128, 204, 1569, 1587, 1755
AfiI CCNNNNNNNGG 2 cut(s) 226, 1039
AflIII ACRYGT 1 cut(s) 911
AgsI TTSAA 9 cut(s) 83, 104, 332, 1009, 1088, 1244, 1345, 1516, 1528
AjnI CCWGG 3 cut(s) 1032, 1038, 1080
Alw21I GWGCWC 3 cut(s) 213, 1062, 1861
Alw26I GTCTC 2 cut(s) 1626, 1688
AlwI GGATC 3 cut(s) 261, 784, 830
Ama87I CYCGRG 2 cut(s) 1163, 1760
Aor13HI TCCGGA 2 cut(s) 226, 1228
AoxI GGCC 4 cut(s) 217, 276, 1317, 1548
ApeKI GCWGC 5 cut(s) 592, 1127, 1379, 1382, 1499
ApoI RAATTY 5 cut(s) 315, 704, 1137, 1173, 1239
Asp700I GAANNNNTTC 1 cut(s) 1004
AspLEI GCGC 3 cut(s) 580, 955, 1186
AspS9I GGNCC 4 cut(s) 218, 607, 1036, 1548
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 5 cut(s) 16, 47, 463, 799, 932
AsuII TTCGAA 1 cut(s) 195
AvaI CYCGRG 2 cut(s) 1163, 1760
AvaII GGWCC 2 cut(s) 607, 1036
BalI TGGCCA 1 cut(s) 278
BanII GRGCYC 2 cut(s) 213, 1861
BauI CACGAG 1 cut(s) 302
BbsI GAAGAC 1 cut(s) 1352
Bbv12I GWGCWC 3 cut(s) 213, 1062, 1861
BbvI GCAGC 5 cut(s) 579, 1114, 1391, 1394, 1486
BccI CCATC 6 cut(s) 5, 241, 787, 1559, 1637, 1652
BceAI ACGGC 3 cut(s) 81, 1456, 1679
BciT130I CCWGG 3 cut(s) 1034, 1040, 1082
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 2 cut(s) 1626, 1688
BfaI CTAG 2 cut(s) 587, 1365
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 1 cut(s) 956
BisI GCNGC 8 cut(s) 52, 111, 188, 593, 1128, 1380, 1383, 1500
BlsI GCNGC 8 cut(s) 53, 112, 189, 594, 1129, 1381, 1384, 1501
BmcAI AGTACT 1 cut(s) 1755
Bme1390I CCNGG 4 cut(s) 221, 1034, 1040, 1082
Bme18I GGWCC 2 cut(s) 607, 1036
BmeT110I CYCGRG 2 cut(s) 1163, 1760
BmgT120I GGNCC 4 cut(s) 218, 607, 1036, 1548
BmiI GGNNCC 4 cut(s) 225, 638, 1723, 1849
BmrFI CCNGG 4 cut(s) 221, 1034, 1040, 1082
BmsI GCATC 3 cut(s) 1392, 1486, 1655
BpiI GAAGAC 1 cut(s) 1352
BplI GAGNNNNNCTC 4 cut(s) 916, 948, 1610, 1642
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 4 cut(s) 275, 755, 1565, 1574
BpuMI CCSGG 1 cut(s) 221
Bsa29I ATCGAT 2 cut(s) 690, 1400
BsaJI CCNNGG 2 cut(s) 1032, 1080
BsaWI WCCGGW 3 cut(s) 129, 226, 1228
Bsc4I CCNNNNNNNGG 2 cut(s) 226, 1039
Bse1I ACTGG 3 cut(s) 825, 1016, 1354
Bse3DI GCAATG 1 cut(s) 513
BseAI TCCGGA 2 cut(s) 226, 1228
BseBI CCWGG 3 cut(s) 1034, 1040, 1082
BseCI ATCGAT 2 cut(s) 690, 1400
BseDI CCNNGG 2 cut(s) 1032, 1080
BseGI GGATG 5 cut(s) 16, 32, 47, 252, 1621
BseLI CCNNNNNNNGG 2 cut(s) 226, 1039
BseMI GCAATG 1 cut(s) 513
BseMII CTCAG 3 cut(s) 155, 432, 692
BseNI ACTGG 3 cut(s) 825, 1016, 1354
BseRI GAGGAG 4 cut(s) 669, 1039, 1042, 1082
BseXI GCAGC 5 cut(s) 579, 1114, 1391, 1394, 1486
BsgI GTGCAG 1 cut(s) 687
Bsh1236I CGCG 1 cut(s) 851
BshFI GGCC 4 cut(s) 219, 278, 1319, 1550
BshVI ATCGAT 2 cut(s) 690, 1400
BsiHKAI GWGCWC 3 cut(s) 213, 1062, 1861
BsiHKCI CYCGRG 2 cut(s) 1163, 1760
BsiSI CCGG 4 cut(s) 130, 221, 227, 1229
BslFI GGGAC 1 cut(s) 1489
BslI CCNNNNNNNGG 2 cut(s) 226, 1039
BsmAI GTCTC 2 cut(s) 1626, 1688
BsmFI GGGAC 1 cut(s) 1489
BsmI GAATGC 1 cut(s) 1443
BsnI GGCC 4 cut(s) 219, 278, 1319, 1550
BsoBI CYCGRG 2 cut(s) 1163, 1760
Bsp119I TTCGAA 1 cut(s) 195
Bsp1286I GDGCHC 3 cut(s) 213, 1062, 1861
Bsp13I TCCGGA 2 cut(s) 226, 1228
Bsp143I GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
Bsp68I TCGCGA 1 cut(s) 851
BspACI CCGC 7 cut(s) 51, 54, 68, 110, 188, 362, 1571
BspANI GGCC 4 cut(s) 219, 278, 1319, 1550
BspCNI CTCAG 3 cut(s) 156, 431, 691
BspDI ATCGAT 2 cut(s) 690, 1400
BspEI TCCGGA 2 cut(s) 226, 1228
BspFNI CGCG 1 cut(s) 851
BspHI TCATGA 2 cut(s) 367, 796
BspLI GGNNCC 4 cut(s) 225, 638, 1723, 1849
BspMAI CTGCAG 1 cut(s) 1381
BspPI GGATC 3 cut(s) 261, 784, 830
BspT104I TTCGAA 1 cut(s) 195
BsrDI GCAATG 1 cut(s) 513
BsrI ACTGG 3 cut(s) 825, 1016, 1354
BssECI CCNNGG 2 cut(s) 1032, 1080
BssMI GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
BssSI CACGAG 1 cut(s) 302
Bst2BI CACGAG 1 cut(s) 302
Bst2UI CCWGG 3 cut(s) 1034, 1040, 1082
Bst4CI ACNGT 2 cut(s) 601, 631
Bst6I CTCTTC 2 cut(s) 192, 1308
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 3 cut(s) 576, 1251, 1561
BstDEI CTNAG 4 cut(s) 164, 418, 678, 1207
BstF5I GGATG 5 cut(s) 16, 32, 47, 252, 1621
BstFNI CGCG 1 cut(s) 851
BstH2I RGCGCY 1 cut(s) 956
BstHHI GCGC 3 cut(s) 580, 955, 1186
BstKTI GATC 6 cut(s) 256, 694, 792, 838, 1074, 1836
BstMAI GTCTC 2 cut(s) 1626, 1688
BstMBI GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
BstNI CCWGG 3 cut(s) 1034, 1040, 1082
BstNSI RCATGY 2 cut(s) 915, 1253
BstSCI CCNGG 4 cut(s) 219, 1032, 1038, 1080
BstSFI CTRYAG 1 cut(s) 1377
BstUI CGCG 1 cut(s) 851
BstV1I GCAGC 5 cut(s) 579, 1114, 1391, 1394, 1486
BstV2I GAAGAC 1 cut(s) 1352
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
Bsu15I ATCGAT 2 cut(s) 690, 1400
BsuRI GGCC 4 cut(s) 219, 278, 1319, 1550
BsuTUI ATCGAT 2 cut(s) 690, 1400
BtsCI GGATG 5 cut(s) 16, 32, 47, 252, 1621
BtsI GCAGTG 2 cut(s) 992, 1260
BtsIMutI CAGTG 4 cut(s) 818, 992, 1260, 1561
BtuMI TCGCGA 1 cut(s) 851
Cac8I GCNNGC 3 cut(s) 576, 1251, 1561
CciI TCATGA 2 cut(s) 367, 796
CfoI GCGC 3 cut(s) 580, 955, 1186
Cfr13I GGNCC 4 cut(s) 218, 607, 1036, 1548
ClaI ATCGAT 2 cut(s) 690, 1400
CseI GACGC 2 cut(s) 145, 347
Csp6I GTAC 5 cut(s) 127, 203, 1568, 1586, 1754
CviQI GTAC 5 cut(s) 127, 203, 1568, 1586, 1754
DdeI CTNAG 4 cut(s) 164, 418, 678, 1207
DpnI GATC 6 cut(s) 255, 693, 791, 837, 1073, 1835
DpnII GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
EaeI YGGCCR 1 cut(s) 276
Eam1104I CTCTTC 2 cut(s) 192, 1308
EarI CTCTTC 2 cut(s) 192, 1308
EciI GGCGGA 2 cut(s) 69, 83
Ecl136II GAGCTC 2 cut(s) 211, 1859
Eco24I GRGCYC 2 cut(s) 213, 1861
Eco47I GGWCC 2 cut(s) 607, 1036
Eco53kI GAGCTC 2 cut(s) 211, 1859
Eco57I CTGAAG 2 cut(s) 278, 1787
Eco88I CYCGRG 2 cut(s) 1163, 1760
EcoICRI GAGCTC 2 cut(s) 211, 1859
EcoO109I RGGNCCY 1 cut(s) 607
EcoRII CCWGG 3 cut(s) 1032, 1038, 1080
EcoT38I GRGCYC 2 cut(s) 213, 1861
FaqI GGGAC 1 cut(s) 1489
FauNDI CATATG 1 cut(s) 865
Fnu4HI GCNGC 8 cut(s) 52, 111, 188, 593, 1128, 1380, 1383, 1500
FokI GGATG 5 cut(s) 23, 39, 54, 259, 1628
FriOI GRGCYC 2 cut(s) 213, 1861
Fsp4HI GCNGC 8 cut(s) 52, 111, 188, 593, 1128, 1380, 1383, 1500
FspBI CTAG 2 cut(s) 587, 1365
FspI TGCGCA 1 cut(s) 1185
GlaI GCGC 3 cut(s) 579, 954, 1185
GluI GCNGC 8 cut(s) 52, 111, 188, 593, 1128, 1380, 1383, 1500
HaeII RGCGCY 1 cut(s) 956
HaeIII GGCC 4 cut(s) 219, 278, 1319, 1550
HapII CCGG 4 cut(s) 130, 221, 227, 1229
HgaI GACGC 2 cut(s) 145, 347
HhaI GCGC 3 cut(s) 580, 955, 1186
Hin6I GCGC 3 cut(s) 578, 953, 1184
HinP1I GCGC 3 cut(s) 578, 953, 1184
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HindIII AAGCTT 3 cut(s) 176, 1010, 1026
HinfI GANTC 8 cut(s) 79, 100, 896, 1159, 1197, 1232, 1619, 1696
HpaII CCGG 4 cut(s) 130, 221, 227, 1229
HphI GGTGA 5 cut(s) 16, 47, 463, 799, 932
Hpy166II GTNNAC 3 cut(s) 857, 1705, 1904
Hpy188I TCNGA 7 cut(s) 165, 258, 421, 431, 710, 1057, 1438
Hpy8I GTNNAC 3 cut(s) 857, 1705, 1904
HpyAV CCTTC 7 cut(s) 26, 32, 170, 209, 256, 1117, 1712
HpyCH4III ACNGT 2 cut(s) 601, 631
HpyF3I CTNAG 4 cut(s) 164, 418, 678, 1207
HspAI GCGC 3 cut(s) 578, 953, 1184
Kpn2I TCCGGA 2 cut(s) 226, 1228
Kzo9I GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
LmnI GCTCC 1 cut(s) 1052
Lsp1109I GCAGC 5 cut(s) 579, 1114, 1391, 1394, 1486
LweI GCATC 3 cut(s) 1392, 1486, 1655
MaeI CTAG 2 cut(s) 587, 1365
MaeIII GTNAC 6 cut(s) 152, 299, 335, 730, 928, 1255
MalI GATC 6 cut(s) 255, 693, 791, 837, 1073, 1835
MboI GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
MboII GAAGA 7 cut(s) 209, 271, 686, 1009, 1325, 1357, 1624
MfeI CAATTG 2 cut(s) 327, 1278
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 3 cut(s) 213, 1062, 1861
MlsI TGGCCA 1 cut(s) 278
MluNI TGGCCA 1 cut(s) 278
MlyI GAGTC 4 cut(s) 890, 1226, 1628, 1690
MmeI TCCRAC 1 cut(s) 69
Mox20I TGGCCA 1 cut(s) 278
MroI TCCGGA 2 cut(s) 226, 1228
MroXI GAANNNNTTC 1 cut(s) 1004
MscI TGGCCA 1 cut(s) 278
MseI TTAA 4 cut(s) 462, 645, 699, 1912
MslI CAYNNNNRTG 1 cut(s) 1656
Msp20I TGGCCA 1 cut(s) 278
MspI CCGG 4 cut(s) 130, 221, 227, 1229
MspR9I CCNGG 4 cut(s) 221, 1034, 1040, 1082
MunI CAATTG 2 cut(s) 327, 1278
Mva1269I GAATGC 1 cut(s) 1443
MvaI CCWGG 3 cut(s) 1034, 1040, 1082
MvnI CGCG 1 cut(s) 851
NciI CCSGG 1 cut(s) 221
NdeI CATATG 1 cut(s) 865
NdeII GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
NlaIV GGNNCC 4 cut(s) 225, 638, 1723, 1849
NmuCI GTSAC 3 cut(s) 299, 335, 1255
NruI TCGCGA 1 cut(s) 851
NsbI TGCGCA 1 cut(s) 1185
NspI RCATGY 2 cut(s) 915, 1253
NspV TTCGAA 1 cut(s) 195
PaeI GCATGC 1 cut(s) 1253
PaeR7I CTCGAG 1 cut(s) 1760
PagI TCATGA 2 cut(s) 367, 796
PciI ACATGT 1 cut(s) 911
PctI GAATGC 1 cut(s) 1443
PdmI GAANNNNTTC 1 cut(s) 1004
PfeI GAWTC 4 cut(s) 79, 100, 1159, 1197
PflFI GACNNNGTC 1 cut(s) 341
PkrI GCNGC 8 cut(s) 53, 112, 189, 594, 1129, 1381, 1384, 1501
PleI GAGTC 4 cut(s) 890, 1226, 1627, 1690
PpsI GAGTC 4 cut(s) 890, 1226, 1627, 1690
PpuMI RGGWCCY 1 cut(s) 607
PscI ACATGT 1 cut(s) 911
Psp124BI GAGCTC 2 cut(s) 213, 1861
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 3 cut(s) 1032, 1038, 1080
PspGI CCWGG 3 cut(s) 1032, 1038, 1080
PspN4I GGNNCC 4 cut(s) 225, 638, 1723, 1849
PspPI GGNCC 4 cut(s) 218, 607, 1036, 1548
PspPPI RGGWCCY 1 cut(s) 607
PstI CTGCAG 1 cut(s) 1381
PsuI RGATCY 1 cut(s) 253
PsyI GACNNNGTC 1 cut(s) 341
RruI TCGCGA 1 cut(s) 851
RsaI GTAC 5 cut(s) 128, 204, 1569, 1587, 1755
RsaNI GTAC 5 cut(s) 127, 203, 1568, 1586, 1754
RseI CAYNNNNRTG 1 cut(s) 1656
SacI GAGCTC 2 cut(s) 213, 1861
SaqAI TTAA 4 cut(s) 462, 645, 699, 1912
SatI GCNGC 8 cut(s) 52, 111, 188, 593, 1128, 1380, 1383, 1500
Sau3AI GATC 6 cut(s) 253, 691, 789, 835, 1071, 1833
Sau96I GGNCC 4 cut(s) 218, 607, 1036, 1548
ScaI AGTACT 1 cut(s) 1755
SchI GAGTC 4 cut(s) 890, 1226, 1628, 1690
ScrFI CCNGG 4 cut(s) 221, 1034, 1040, 1082
SduI GDGCHC 3 cut(s) 213, 1062, 1861
SfaNI GCATC 3 cut(s) 1392, 1486, 1655
SfcI CTRYAG 1 cut(s) 1377
Sfr274I CTCGAG 1 cut(s) 1760
SfuI TTCGAA 1 cut(s) 195
SinI GGWCC 2 cut(s) 607, 1036
SlaI CTCGAG 1 cut(s) 1760
SmiMI CAYNNNNRTG 1 cut(s) 1656
SmlI CTYRAG 5 cut(s) 290, 770, 1580, 1589, 1760
SmoI CTYRAG 5 cut(s) 290, 770, 1580, 1589, 1760
SphI GCATGC 1 cut(s) 1253
SsiI CCGC 7 cut(s) 51, 54, 68, 110, 188, 362, 1571
SspMI CTAG 2 cut(s) 587, 1365
SstI GAGCTC 2 cut(s) 213, 1861
StyD4I CCNGG 4 cut(s) 219, 1032, 1038, 1080
TaaI ACNGT 2 cut(s) 601, 631
TatI WGTACW 1 cut(s) 1753
TauI GCSGC 3 cut(s) 54, 113, 190
TfiI GAWTC 4 cut(s) 79, 100, 1159, 1197
Tru1I TTAA 4 cut(s) 462, 645, 699, 1912
Tru9I TTAA 4 cut(s) 462, 645, 699, 1912
TscAI CASTG 4 cut(s) 825, 992, 1260, 1561
TseFI GTSAC 3 cut(s) 299, 335, 1255
TseI GCWGC 5 cut(s) 592, 1127, 1379, 1382, 1499
Tsp45I GTSAC 3 cut(s) 299, 335, 1255
TspDTI ATGAA 8 cut(s) 188, 347, 356, 762, 1148, 1299, 1678, 1770
TspRI CASTG 4 cut(s) 825, 992, 1260, 1561
Tth111I GACNNNGTC 1 cut(s) 341
VpaK11BI GGWCC 2 cut(s) 607, 1036
XapI RAATTY 5 cut(s) 315, 704, 1137, 1173, 1239
XceI RCATGY 2 cut(s) 915, 1253
XhoI CTCGAG 1 cut(s) 1760
XmnI GAANNNNTTC 1 cut(s) 1004
XspI CTAG 2 cut(s) 587, 1365
ZrmI AGTACT 1 cut(s) 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.