Rroxscaffold_7G00187780

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0004467
Physical Location & Seq
Reverse (-)
27230948 .. 27234023
3076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00187780.1

Sequence Viewer

Length: 1950 bp
ATGGCAGAGAGGGAGATGGTGATGGAGGGAATTAGAAGGGATCATTATCATGGGAAGAAGAATGTTGGTGGTGGTGGTGAAGATGAAAGCGATGGCGGCAGGGTTGAGGAATTGATGGGAGTGATTGAGACCGTTGGATCGTATTCGGGGTTTCGAAGAGCTCACAGGAAGGAGTGCTTGAGCTTGGTGAGGAGGTTGAAGCTATTGCTGCCTCTATTGGAGGAAATAAGGGAGTTGGAGTACTACTCCAATCAGGCTTTGAGCTCTTTGTCTAATTTGAACAAGGCAATTGCTTCTGCCAAGAAGTTGCTCAAGACTTGTAGCTGTGGGAGTAAGATATACTTGACTCTGGAAAGTGAGGCAATGATGGGAAGGTTTCATGATGTTTATGATAAACTAAGCCAGGCTTTGGATCATTTCCCTTATGTTGAGCTTGGGATCTCAATTGAAGTCAAAGAGCAAGTTCAACTAATGAGAATGCAACTCAAACGAGCAAAGAAACGGGCAGATACACAGGATATAGAGCTAGCAATGGACCTGATGGTTGTGTTCTCCAAGAAAAATGATGACAGGAATGCAGATAAAGCGATACTTGAAAGACTAGCCAACAAGTTGGAACTACACACTATTGCAGACTTGAAAGAGGAAACAATAGCTGTTAGAAAGCTAGCTAAAAGGAGATCAGCAAGGCAGAATGCTGAAAGCATTCAACAGGTCACTGATCTTTTGGGAAGGTTTAAAGAAAATGCAGGGATATATGAGGACTTCTTGCTCGATGGTCCTGTTTCCACGAGAAATCTGAGGCAGTGTCAGTCTTTGTTGATCCCCAATGAGTTTCTATGCCCGATTACGTTGGAGATCATGACTGATCCTGTTATTGTTGCAACTGGACAGACATATGAAAGAGCAAGCATACAAAAGTGGCTGGGTTCCAATCACTACACGTGCCCAAAGACGGGGCAAACATTGGATCATGTATCGCTAGCACCAAATTTTGCTCTCAAAAATCTAATCCAGCAATGGTGTGAGAAGAATCATTTTGAGCTGCCCAAGAAAGATTCTAATGCCTTTTCTGATGGCTCTACTGCTGAAATTTTAGAGGAAATATCTTCCTTAGTGTATGATCTATCTTCATGTCAGCTGGATGTTTTAAAAGAAGCCATTTTTAAGATTCGAATGCTCTCTAAAGAGAATCCGGAGAATAGAGTTCTGATAGCTAAGGGTGGAGGGATTCCCCAGTTGATTAAGCTCTTGTCACATCCAGATTCCAAGATTCAAGAACACACAGTGACAGCTCTTCTAAATTTATCGATTGATGAGACCAACAAAAGACTCATAGCAGGAAAAGAGTCTATTCATGCTATAATTGAGATCCTGCAGCATGGAACAGATGAAGCTAGAGAGAATTCTGCTGCTGCATTGTTCAGCTTATCAATGCTCAATGAGAACAAAGTACTTGTTGGGACTTTGAATGGAATTCCTCCTTTGGTAGATCTTTTGCAGAATGGAACAACCAGAGGTAGAAAGGATGCTGCCACTGCATTATTTAACTTGTCTTTGAACCAAGCCAACAAGTCTAGGGCCGTTGACGCAGGTCTAATACCGCCCTTGATTCATCTACTTGAGGATAAGAACTTGGGCATGACTGATGAAGCCCTCTCAATTTTGTTACTCCTTGCATCACATCCTGAGGGTCGAAACGAGATTGGGAGATTATCTTTCATTGAAACTCTGGTTGGAATTATCAAGAGTGGAACCCCCAAGAACAAGGAATGTGCTACATCGGTTCTTCTAGAGCTCGGATTGAACAATTCGTCTTTCACTTTGGCTGCACTTCAGTATGGTGTGTATGAGCATCTGGTGGAGGTGGCTAGATGTGGAACCAACAGAGCTCAAAGGAAAGCAAACTCCCTTTTGCAGCATATGAGTGAATGTGAGCACATTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

649

Amino Acids

72.31

Weight (kDa)

6.45

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCAfunc PF19584 52 - 158 8.3e-06 MCAfunc domain
MLKL_N PF22215 55 - 175 5.5e-06 Mixed lineage kinase domain-like N-terminal domain
PUB10_N PF25368 56 - 166 1.6e-37 PUB10-like, N-terminal domain
U-box PF04564 275 - 345 6.4e-23 U-box domain
Arm_2 PF04826 368 - 531 5.9e-06 Armadillo-like
ARM_PUB PF25598 369 - 643 1.9e-24 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 383 - 545 3.9e-10 ARMC5
Arm PF00514 398 - 437 3e-08 Armadillo/beta-catenin-like repeat
Arm PF00514 481 - 519 2.9e-07 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1583
AccB7I CCANNNNNTGG 1 cut(s) 409
AccIII TCCGGA 1 cut(s) 1195
AciI CCGC 2 cut(s) 96, 1604
AclWI GGATC 8 cut(s) 48, 145, 420, 446, 817, 863, 978, 1366
AcsI RAATTY 5 cut(s) 991, 1092, 1303, 1405, 1476
AcuI CTGAAG 1 cut(s) 1820
AcvI CACGTG 1 cut(s) 945
AdeI CACNNNGTG 1 cut(s) 1288
AfaI GTAC 2 cut(s) 242, 1455
AfiI CCNNNNNNNGG 3 cut(s) 409, 955, 956
AflIII ACRYGT 1 cut(s) 942
AjnI CCWGG 1 cut(s) 402
AjuI GAANNNNNNNTTGG 2 cut(s) 1719, 1751
Alw21I GWGCWC 5 cut(s) 163, 266, 1800, 1894, 1941
Alw26I GTCTC 2 cut(s) 122, 1313
AlwI GGATC 8 cut(s) 48, 145, 420, 446, 817, 863, 978, 1366
Aor13HI TCCGGA 1 cut(s) 1195
AoxI GGCC 1 cut(s) 1581
ApeKI GCWGC 8 cut(s) 208, 1045, 1378, 1412, 1415, 1532, 1829, 1918
ApoI RAATTY 5 cut(s) 991, 1092, 1303, 1405, 1476
Asp700I GAANNNNTTC 1 cut(s) 705
AspS9I GGNCC 3 cut(s) 535, 779, 1581
AsuHPI GGTGA 3 cut(s) 31, 89, 199
AsuII TTCGAA 2 cut(s) 154, 1174
AsuNHI GCTAGC 3 cut(s) 526, 667, 982
AvaII GGWCC 2 cut(s) 535, 779
AxyI CCTNAGG 1 cut(s) 1689
BaeGI GKGCMC 1 cut(s) 950
BanII GRGCYC 4 cut(s) 163, 266, 1800, 1894
BauI CACGAG 1 cut(s) 790
BbrPI CACGTG 1 cut(s) 945
Bbv12I GWGCWC 5 cut(s) 163, 266, 1800, 1894, 1941
BbvI GCAGC 8 cut(s) 195, 1032, 1390, 1399, 1402, 1519, 1816, 1930
BccI CCATC 8 cut(s) 10, 16, 86, 109, 361, 535, 770, 1070
BceAI ACGGC 1 cut(s) 1568
BciT130I CCWGG 1 cut(s) 404
BcoDI GTCTC 2 cut(s) 122, 1313
BfaI CTAG 8 cut(s) 527, 602, 668, 983, 1398, 1578, 1793, 1872
BfmI CTRYAG 1 cut(s) 1376
BfuAI ACCTGC 1 cut(s) 1583
BglII AGATCT 1 cut(s) 1492
BisI GCNGC 9 cut(s) 97, 209, 1046, 1379, 1413, 1416, 1533, 1830, 1919
BlsI GCNGC 9 cut(s) 98, 210, 1047, 1380, 1414, 1417, 1534, 1831, 1920
BmcAI AGTACT 2 cut(s) 242, 1455
Bme1390I CCNGG 1 cut(s) 404
Bme18I GGWCC 2 cut(s) 535, 779
BmgT120I GGNCC 3 cut(s) 535, 779, 1581
BmiI GGNNCC 3 cut(s) 931, 1756, 1882
BmrFI CCNGG 1 cut(s) 404
BmrI ACTGGG 1 cut(s) 1231
BmsI GCATC 3 cut(s) 1519, 1688, 1864
BmtI GCTAGC 3 cut(s) 530, 671, 986
BmuI ACTGGG 1 cut(s) 1231
BoxI GACNNNNGTC 1 cut(s) 1593
BplI GAGNNNNNCTC 2 cut(s) 230, 262
Bpu10I CCTNAGC 1 cut(s) 1218
Bpu14I TTCGAA 2 cut(s) 154, 1174
BpuEI CTTGAG 3 cut(s) 199, 296, 1643
Bsa29I ATCGAT 1 cut(s) 1310
BsaAI YACGTR 1 cut(s) 945
BsaBI GATNNNNATC 1 cut(s) 45
BsaI GGTCTC 2 cut(s) 122, 1313
BsaWI WCCGGW 1 cut(s) 1195
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 3 cut(s) 409, 955, 956
Bse1I ACTGG 2 cut(s) 892, 1237
Bse21I CCTNAGG 1 cut(s) 1689
Bse3DI GCAATG 3 cut(s) 369, 537, 1025
Bse8I GATNNNNATC 1 cut(s) 45
BseAI TCCGGA 1 cut(s) 1195
BseBI CCWGG 1 cut(s) 404
BseCI ATCGAT 1 cut(s) 1310
BseGI GGATG 4 cut(s) 1150, 1258, 1534, 1684
BseJI GATNNNNATC 1 cut(s) 45
BseLI CCNNNNNNNGG 3 cut(s) 409, 955, 956
BseMI GCAATG 3 cut(s) 369, 537, 1025
BseMII CTCAG 2 cut(s) 791, 1680
BseNI ACTGG 2 cut(s) 892, 1237
BseRI GAGGAG 1 cut(s) 205
BseSI GKGCMC 1 cut(s) 950
BseXI GCAGC 8 cut(s) 195, 1032, 1390, 1399, 1402, 1519, 1816, 1930
BseYI CCCAGC 1 cut(s) 925
BsgI GTGCAG 1 cut(s) 1815
BshFI GGCC 1 cut(s) 1583
BshVI ATCGAT 1 cut(s) 1310
BsiHKAI GWGCWC 5 cut(s) 163, 266, 1800, 1894, 1941
BsiSI CCGG 1 cut(s) 1196
BslFI GGGAC 1 cut(s) 1477
BslI CCNNNNNNNGG 3 cut(s) 409, 955, 956
BsmAI GTCTC 2 cut(s) 122, 1313
BsmFI GGGAC 1 cut(s) 1477
BsmI GAATGC 5 cut(s) 483, 580, 700, 705, 1182
BsnI GGCC 1 cut(s) 1583
Bso31I GGTCTC 2 cut(s) 122, 1313
Bsp119I TTCGAA 2 cut(s) 154, 1174
Bsp1286I GDGCHC 6 cut(s) 163, 266, 950, 1800, 1894, 1941
Bsp13I TCCGGA 1 cut(s) 1195
BspACI CCGC 2 cut(s) 96, 1604
BspANI GGCC 1 cut(s) 1583
BspCNI CTCAG 2 cut(s) 792, 1681
BspDI ATCGAT 1 cut(s) 1310
BspEI TCCGGA 1 cut(s) 1195
BspHI TCATGA 2 cut(s) 379, 861
BspLI GGNNCC 3 cut(s) 931, 1756, 1882
BspMAI CTGCAG 1 cut(s) 1380
BspMI ACCTGC 1 cut(s) 1583
BspOI GCTAGC 3 cut(s) 530, 671, 986
BspPI GGATC 8 cut(s) 48, 145, 420, 446, 817, 863, 978, 1366
BspQI GCTCTTC 2 cut(s) 151, 1302
BspT104I TTCGAA 2 cut(s) 154, 1174
BspTNI GGTCTC 2 cut(s) 122, 1313
BsrDI GCAATG 3 cut(s) 369, 537, 1025
BsrI ACTGG 2 cut(s) 892, 1237
BssSI CACGAG 1 cut(s) 790
Bst2BI CACGAG 1 cut(s) 790
Bst2UI CCWGG 1 cut(s) 404
Bst4CI ACNGT 2 cut(s) 133, 1288
Bst6I CTCTTC 2 cut(s) 151, 1302
BstBAI YACGTR 1 cut(s) 945
BstBI TTCGAA 2 cut(s) 154, 1174
BstC8I GCNNGC 4 cut(s) 528, 669, 910, 984
BstDEI CTNAG 5 cut(s) 398, 800, 1114, 1218, 1689
BstF5I GGATG 4 cut(s) 1150, 1258, 1534, 1684
BstMAI GTCTC 2 cut(s) 122, 1313
BstMWI GCNNNNNNNGC 5 cut(s) 96, 208, 584, 1538, 1589
BstNI CCWGG 1 cut(s) 404
BstPAI GACNNNNGTC 1 cut(s) 1593
BstSCI CCNGG 1 cut(s) 402
BstSFI CTRYAG 1 cut(s) 1376
BstSLI GKGCMC 1 cut(s) 950
BstV1I GCAGC 8 cut(s) 195, 1032, 1390, 1399, 1402, 1519, 1816, 1930
BstX2I RGATCY 3 cut(s) 438, 1371, 1492
BstXI CCANNNNNNTGG 1 cut(s) 613
BstYI RGATCY 3 cut(s) 438, 1371, 1492
Bsu15I ATCGAT 1 cut(s) 1310
Bsu36I CCTNAGG 1 cut(s) 1689
BsuRI GGCC 1 cut(s) 1583
BsuTUI ATCGAT 1 cut(s) 1310
BtgZI GCGATG 1 cut(s) 105
BtsCI GGATG 4 cut(s) 1150, 1258, 1534, 1684
BtsI GCAGTG 2 cut(s) 812, 1536
BtsIMutI CAGTG 4 cut(s) 717, 812, 1293, 1536
BveI ACCTGC 1 cut(s) 1583
Cac8I GCNNGC 4 cut(s) 528, 669, 910, 984
CciI TCATGA 2 cut(s) 379, 861
Cfr13I GGNCC 3 cut(s) 535, 779, 1581
ClaI ATCGAT 1 cut(s) 1310
CseI GACGC 1 cut(s) 1598
Csp6I GTAC 2 cut(s) 241, 1454
CviAII CATG 8 cut(s) 50, 380, 862, 974, 1134, 1358, 1382, 1642
CviQI GTAC 2 cut(s) 241, 1454
DdeI CTNAG 5 cut(s) 398, 800, 1114, 1218, 1689
DraI TTTAAA 2 cut(s) 739, 1152
DraIII CACNNNGTG 1 cut(s) 1288
Eam1104I CTCTTC 2 cut(s) 151, 1302
EarI CTCTTC 2 cut(s) 151, 1302
Ecl136II GAGCTC 4 cut(s) 161, 264, 1798, 1892
Eco24I GRGCYC 4 cut(s) 163, 266, 1800, 1894
Eco31I GGTCTC 2 cut(s) 122, 1313
Eco47I GGWCC 2 cut(s) 535, 779
Eco53kI GAGCTC 4 cut(s) 161, 264, 1798, 1892
Eco57I CTGAAG 1 cut(s) 1820
Eco72I CACGTG 1 cut(s) 945
Eco81I CCTNAGG 1 cut(s) 1689
EcoICRI GAGCTC 4 cut(s) 161, 264, 1798, 1892
EcoRI GAATTC 2 cut(s) 1405, 1476
EcoRII CCWGG 1 cut(s) 402
EcoT38I GRGCYC 4 cut(s) 163, 266, 1800, 1894
FaeI CATG 8 cut(s) 53, 383, 865, 977, 1137, 1361, 1385, 1645
FalI AAGNNNNNCTT 8 cut(s) 161, 193, 326, 358, 391, 423, 576, 608
FaqI GGGAC 1 cut(s) 1477
FatI CATG 8 cut(s) 49, 379, 861, 973, 1133, 1357, 1381, 1641
FauNDI CATATG 2 cut(s) 898, 1923
Fnu4HI GCNGC 9 cut(s) 97, 209, 1046, 1379, 1413, 1416, 1533, 1830, 1919
FokI GGATG 4 cut(s) 1157, 1245, 1541, 1671
FriOI GRGCYC 4 cut(s) 163, 266, 1800, 1894
Fsp4HI GCNGC 9 cut(s) 97, 209, 1046, 1379, 1413, 1416, 1533, 1830, 1919
FspBI CTAG 8 cut(s) 527, 602, 668, 983, 1398, 1578, 1793, 1872
GluI GCNGC 9 cut(s) 97, 209, 1046, 1379, 1413, 1416, 1533, 1830, 1919
GsaI CCCAGC 1 cut(s) 929
HaeIII GGCC 1 cut(s) 1583
HapII CCGG 1 cut(s) 1196
HgaI GACGC 1 cut(s) 1598
Hin1II CATG 8 cut(s) 53, 383, 865, 977, 1137, 1361, 1385, 1645
HincII GTYRAC 1 cut(s) 1588
HindII GTYRAC 1 cut(s) 1588
HpaII CCGG 1 cut(s) 1196
HphI GGTGA 3 cut(s) 31, 89, 199
Hpy166II GTNNAC 1 cut(s) 1588
Hpy188I TCNGA 4 cut(s) 801, 1075, 1212, 1802
Hpy8I GTNNAC 1 cut(s) 1588
HpyAV CCTTC 4 cut(s) 30, 163, 366, 726
HpyCH4III ACNGT 2 cut(s) 133, 1288
HpyCH4IV ACGT 2 cut(s) 851, 944
HpyF10VI GCNNNNNNNGC 5 cut(s) 96, 208, 584, 1538, 1589
HpyF3I CTNAG 5 cut(s) 398, 800, 1114, 1218, 1689
HpySE526I ACGT 2 cut(s) 851, 944
Hsp92II CATG 8 cut(s) 53, 383, 865, 977, 1137, 1361, 1385, 1645
Kpn2I TCCGGA 1 cut(s) 1195
LguI GCTCTTC 2 cut(s) 151, 1302
Lsp1109I GCAGC 8 cut(s) 195, 1032, 1390, 1399, 1402, 1519, 1816, 1930
LweI GCATC 3 cut(s) 1519, 1688, 1864
MaeI CTAG 8 cut(s) 527, 602, 668, 983, 1398, 1578, 1793, 1872
MaeII ACGT 2 cut(s) 851, 944
MaeIII GTNAC 4 cut(s) 715, 1254, 1288, 1668
MboII GAAGA 9 cut(s) 67, 70, 92, 168, 1042, 1101, 1122, 1289, 1781
MfeI CAATTG 2 cut(s) 288, 444
MflI RGATCY 3 cut(s) 438, 1371, 1492
MhlI GDGCHC 6 cut(s) 163, 266, 950, 1800, 1894, 1941
MlyI GAGTC 3 cut(s) 340, 1326, 1358
MmeI TCCRAC 5 cut(s) 115, 216, 594, 834, 1717
MroI TCCGGA 1 cut(s) 1195
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 6 cut(s) 738, 1151, 1167, 1245, 1548, 1948
MslI CAYNNNNRTG 2 cut(s) 48, 1926
MspA1I CMGCKG 1 cut(s) 1141
MspI CCGG 1 cut(s) 1196
MspR9I CCNGG 1 cut(s) 404
MunI CAATTG 2 cut(s) 288, 444
Mva1269I GAATGC 5 cut(s) 483, 580, 700, 705, 1182
MvaI CCWGG 1 cut(s) 404
MwoI GCNNNNNNNGC 5 cut(s) 96, 208, 584, 1538, 1589
NdeI CATATG 2 cut(s) 898, 1923
NheI GCTAGC 3 cut(s) 526, 667, 982
NlaIII CATG 8 cut(s) 53, 383, 865, 977, 1137, 1361, 1385, 1645
NlaIV GGNNCC 3 cut(s) 931, 1756, 1882
NmuCI GTSAC 3 cut(s) 715, 1254, 1288
NspV TTCGAA 2 cut(s) 154, 1174
PagI TCATGA 2 cut(s) 379, 861
PciSI GCTCTTC 2 cut(s) 151, 1302
PctI GAATGC 5 cut(s) 483, 580, 700, 705, 1182
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 8 cut(s) 1033, 1058, 1171, 1192, 1231, 1265, 1273, 1612
PflMI CCANNNNNTGG 1 cut(s) 409
PkrI GCNGC 9 cut(s) 98, 210, 1047, 1380, 1414, 1417, 1534, 1831, 1920
PleI GAGTC 3 cut(s) 340, 1326, 1357
PmaCI CACGTG 1 cut(s) 945
PmlI CACGTG 1 cut(s) 945
PpsI GAGTC 3 cut(s) 340, 1326, 1357
Ppu21I YACGTR 1 cut(s) 945
PshAI GACNNNNGTC 1 cut(s) 1593
Psp124BI GAGCTC 4 cut(s) 163, 266, 1800, 1894
Psp6I CCWGG 1 cut(s) 402
PspCI CACGTG 1 cut(s) 945
PspFI CCCAGC 1 cut(s) 925
PspGI CCWGG 1 cut(s) 402
PspN4I GGNNCC 3 cut(s) 931, 1756, 1882
PspPI GGNCC 3 cut(s) 535, 779, 1581
PstI CTGCAG 1 cut(s) 1380
PsuI RGATCY 3 cut(s) 438, 1371, 1492
PvuII CAGCTG 1 cut(s) 1141
RsaI GTAC 2 cut(s) 242, 1455
RsaNI GTAC 2 cut(s) 241, 1454
RseI CAYNNNNRTG 2 cut(s) 48, 1926
SacI GAGCTC 4 cut(s) 163, 266, 1800, 1894
SapI GCTCTTC 2 cut(s) 151, 1302
SaqAI TTAA 6 cut(s) 738, 1151, 1167, 1245, 1548, 1948
SatI GCNGC 9 cut(s) 97, 209, 1046, 1379, 1413, 1416, 1533, 1830, 1919
Sau96I GGNCC 3 cut(s) 535, 779, 1581
ScaI AGTACT 2 cut(s) 242, 1455
SchI GAGTC 3 cut(s) 340, 1326, 1358
ScrFI CCNGG 1 cut(s) 404
SduI GDGCHC 6 cut(s) 163, 266, 950, 1800, 1894, 1941
SfaNI GCATC 3 cut(s) 1519, 1688, 1864
SfcI CTRYAG 1 cut(s) 1376
SfuI TTCGAA 2 cut(s) 154, 1174
SinI GGWCC 2 cut(s) 535, 779
SmiMI CAYNNNNRTG 2 cut(s) 48, 1926
SmlI CTYRAG 3 cut(s) 178, 311, 1622
SmoI CTYRAG 3 cut(s) 178, 311, 1622
SsiI CCGC 2 cut(s) 96, 1604
SspMI CTAG 8 cut(s) 527, 602, 668, 983, 1398, 1578, 1793, 1872
SstI GAGCTC 4 cut(s) 163, 266, 1800, 1894
StyD4I CCNGG 1 cut(s) 402
TaaI ACNGT 2 cut(s) 133, 1288
TaiI ACGT 2 cut(s) 854, 947
TaqI TCGA 5 cut(s) 154, 774, 1174, 1310, 1696
TatI WGTACW 2 cut(s) 240, 1453
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 8 cut(s) 1033, 1058, 1171, 1192, 1231, 1265, 1273, 1612
Tru1I TTAA 6 cut(s) 738, 1151, 1167, 1245, 1548, 1948
Tru9I TTAA 6 cut(s) 738, 1151, 1167, 1245, 1548, 1948
TscAI CASTG 4 cut(s) 724, 812, 1293, 1543
TseFI GTSAC 3 cut(s) 715, 1254, 1288
TseI GCWGC 8 cut(s) 208, 1045, 1378, 1412, 1415, 1532, 1829, 1918
Tsp45I GTSAC 3 cut(s) 715, 1254, 1288
TspDTI ATGAA 9 cut(s) 99, 368, 915, 1122, 1346, 1407, 1604, 1665, 1711
TspRI CASTG 4 cut(s) 724, 812, 1293, 1543
Van91I CCANNNNNTGG 1 cut(s) 409
VpaK11BI GGWCC 2 cut(s) 535, 779
XapI RAATTY 5 cut(s) 991, 1092, 1303, 1405, 1476
XbaI TCTAGA 1 cut(s) 1792
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 8 cut(s) 527, 602, 668, 983, 1398, 1578, 1793, 1872
ZrmI AGTACT 2 cut(s) 242, 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.