RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42340 |
| fragaria_vesca | FvH4_2g16600 FvH4_2g16600 FvH4_2g16600 FvH4_2g16600 FvH4_2g37350 |
| malus_domestica | MD05G1134200.v1.1 MD08G1002000.v1.1 MD15G1001100.v1.1 |
| prunus_persica | Prupe.1G353700_v2.0.a1 Prupe.8G178000_v2.0.a1 Prupe.8G178000_v2.0.a1 |
| pyrus_communis | pycom15g00050 |
| rosa_chinensis | RchiOBHm_Chr6g0280661 RchiOBHm_Chr6g0304371 |
| rosa_laevigata | RLG00000010986 RLG00000013038 |
| rosa_multiflora | Rmu_sc0000976.1_g000006 Rmu_ssc0000218.1_g000042 |
| rosa_roxburghii | Rroxscaffold_7G00187780 |
| rosa_rugosa | Rorug06G0133500 Rorug06G0330800 |
| rosa_samantha | Rh6AG246100 Rh6AG443800 Rh6BG248400 Rh6BG458600 Rh6CG249700 Rh6CG456600 Rh6DG241000 Rh6DG443300 |
| rosa_wichuraiana | Rw6G021300 Rw6G038520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 77, 155 |
| AciI | CCGC | 3 cut(s) | 77, 155, 180 |
| AluBI | AGCT | 1 cut(s) | 63 |
| AluI | AGCT | 1 cut(s) | 63 |
| Alw26I | GTCTC | 1 cut(s) | 66 |
| AoxI | GGCC | 1 cut(s) | 5 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 159, 191 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 55 |
| AsuC2I | CCSGG | 1 cut(s) | 126 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| BccI | CCATC | 3 cut(s) | 158, 195, 235 |
| BceAI | ACGGC | 1 cut(s) | 121 |
| BcnI | CCSGG | 1 cut(s) | 126 |
| BcoDI | GTCTC | 1 cut(s) | 66 |
| BfaI | CTAG | 2 cut(s) | 60, 173 |
| BisI | GCNGC | 1 cut(s) | 156 |
| BlsI | GCNGC | 1 cut(s) | 157 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| BmiI | GGNNCC | 2 cut(s) | 123, 225 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmsI | GCATC | 1 cut(s) | 86 |
| BpmI | CTGGAG | 2 cut(s) | 33, 163 |
| BpuMI | CCSGG | 1 cut(s) | 126 |
| BsaBI | GATNNNNATC | 1 cut(s) | 168 |
| BsaJI | CCNNGG | 1 cut(s) | 125 |
| BsaWI | WCCGGW | 1 cut(s) | 136 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 63, 93 |
| Bse1I | ACTGG | 1 cut(s) | 146 |
| Bse8I | GATNNNNATC | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 125 |
| BseJI | GATNNNNATC | 1 cut(s) | 168 |
| BseNI | ACTGG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 160 |
| Bsh1236I | CGCG | 2 cut(s) | 77, 155 |
| BshFI | GGCC | 1 cut(s) | 7 |
| BsiSI | CCGG | 2 cut(s) | 125, 137 |
| BsmAI | GTCTC | 1 cut(s) | 66 |
| BsmBI | CGTCTC | 1 cut(s) | 66 |
| BsnI | GGCC | 1 cut(s) | 7 |
| Bsp143I | GATC | 1 cut(s) | 111 |
| BspACI | CCGC | 3 cut(s) | 77, 155, 180 |
| BspANI | GGCC | 1 cut(s) | 7 |
| BspFNI | CGCG | 2 cut(s) | 77, 155 |
| BspLI | GGNNCC | 2 cut(s) | 123, 225 |
| BsrI | ACTGG | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 125 |
| BssMI | GATC | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 1 cut(s) | 9 |
| BstFNI | CGCG | 2 cut(s) | 77, 155 |
| BstKTI | GATC | 1 cut(s) | 114 |
| BstMAI | GTCTC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 111 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 83, 105, 232 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstUI | CGCG | 2 cut(s) | 77, 155 |
| BsuRI | GGCC | 1 cut(s) | 7 |
| BtgZI | GCGATG | 1 cut(s) | 109 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 1 cut(s) | 9 |
| CseI | GACGC | 1 cut(s) | 83 |
| CviAII | CATG | 1 cut(s) | 191 |
| CviJI | RGCY | 5 cut(s) | 7, 63, 86, 226, 256 |
| CviKI_1 | RGCY | 5 cut(s) | 7, 63, 86, 226, 256 |
| DpnI | GATC | 1 cut(s) | 113 |
| DpnII | GATC | 1 cut(s) | 111 |
| Esp3I | CGTCTC | 1 cut(s) | 66 |
| FaeI | CATG | 1 cut(s) | 194 |
| FaiI | YATR | 1 cut(s) | 192 |
| FatI | CATG | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 1 cut(s) | 156 |
| FspBI | CTAG | 2 cut(s) | 60, 173 |
| GluI | GCNGC | 1 cut(s) | 156 |
| GsuI | CTGGAG | 2 cut(s) | 33, 163 |
| HaeIII | GGCC | 1 cut(s) | 7 |
| HapII | CCGG | 2 cut(s) | 125, 137 |
| HgaI | GACGC | 1 cut(s) | 83 |
| Hin1II | CATG | 1 cut(s) | 194 |
| HinfI | GANTC | 3 cut(s) | 51, 194, 212 |
| HpaII | CCGG | 2 cut(s) | 125, 137 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 134 |
| Hpy188III | TCNNGA | 2 cut(s) | 198, 209 |
| Hpy8I | GTNNAC | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 1 cut(s) | 99 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 83, 105, 232 |
| Hsp92II | CATG | 1 cut(s) | 194 |
| Kzo9I | GATC | 1 cut(s) | 111 |
| LmnI | GCTCC | 1 cut(s) | 223 |
| LpnPI | CCDG | 5 cut(s) | 21, 72, 127, 138, 150 |
| LweI | GCATC | 1 cut(s) | 86 |
| MaeI | CTAG | 2 cut(s) | 60, 173 |
| MalI | GATC | 1 cut(s) | 113 |
| MboI | GATC | 1 cut(s) | 111 |
| MluCI | AATT | 1 cut(s) | 185 |
| MnlI | CCTC | 2 cut(s) | 138, 246 |
| MroXI | GAANNNNTTC | 1 cut(s) | 55 |
| MseI | TTAA | 1 cut(s) | 248 |
| MspI | CCGG | 2 cut(s) | 125, 137 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MvnI | CGCG | 2 cut(s) | 77, 155 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 83, 105, 232 |
| NciI | CCSGG | 1 cut(s) | 126 |
| NdeII | GATC | 1 cut(s) | 111 |
| NlaIII | CATG | 1 cut(s) | 194 |
| NlaIV | GGNNCC | 2 cut(s) | 123, 225 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 111, 205 |
| PdmI | GAANNNNTTC | 1 cut(s) | 55 |
| PfeI | GAWTC | 3 cut(s) | 51, 194, 212 |
| PkrI | GCNGC | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 2 cut(s) | 123, 225 |
| SaqAI | TTAA | 1 cut(s) | 248 |
| SatI | GCNGC | 1 cut(s) | 156 |
| Sau3AI | GATC | 1 cut(s) | 111 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SetI | ASST | 1 cut(s) | 65 |
| SfaNI | GCATC | 1 cut(s) | 86 |
| Sse9I | AATT | 1 cut(s) | 185 |
| SsiI | CCGC | 3 cut(s) | 77, 155, 180 |
| SspMI | CTAG | 2 cut(s) | 60, 173 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| TaqI | TCGA | 1 cut(s) | 199 |
| TasI | AATT | 1 cut(s) | 185 |
| TauI | GCSGC | 1 cut(s) | 158 |
| TfiI | GAWTC | 3 cut(s) | 51, 194, 212 |
| Tru1I | TTAA | 1 cut(s) | 248 |
| Tru9I | TTAA | 1 cut(s) | 248 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TspRI | CASTG | 1 cut(s) | 106 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 234 |
| XmnI | GAANNNNTTC | 1 cut(s) | 55 |
| XspI | CTAG | 2 cut(s) | 60, 173 |