RchiOBHm_Chr6g0304371

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0004467
Physical Location & Seq
Reverse (-)
63674574 .. 63676911
2338 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27347

Sequence Viewer

Length: 1905 bp
ATGGTGATGGATGGAGAGAGAGAGGGATGTGAAGGTGAAGGATGTGGAGAGGAAACGGCGGAGGGTTTGATTCAATCGTTGGAGAGCGTGATTCAATCGGCGGCTCGATTAGGAGAGTACCGGAGGACGCAGAGAAAAGAATGTTACAACCTTCTGAGGCGTATGAAGCTTTTGTTGCCGCTTTTCGAAGAGGTACGAGAGCTCGAAGGCCCGGTTCCGGAGAGCGTTGTTGTTTGGATGGTGGATCTGAAGAAGGTTCTTGTCATGGCCAAGAAATTGCTCAAGTTTTGTCACGAGGACAGCAAAATTTATCTGGCAATTGAAAGTGACGCAGTCATGGTTAGATTTCATGCGGTTCATGACAAACTCACTCTGGCTTTGGATAGTGTGCCTGATGAGCTTGGTATCTCAGACGAAATCCGAGAACAGATTGACCTCATGGTGAGGCAACTTAAACGAGCAAGGAAGCGAACAGATACACAAGATATAGAACTTGCAATGGATATAATGGTGGTTTTGGAGAAAAAAGATGACAGAAATGCTGATAGTGCCATAATAGAAAGGCTGGCGCAAAAGCTAGAGCTGCATACAGTTGAGGACCTGAAAATAGAAACAATTGCTGTAAGGAACCTTGTTAAAGAAAGAGGAGGGATTAGTGCAGAAACTTCTCAGCAAGTCATCGATCTTCTTAACAAATTCAGACTACTTGCAGGAATGGAAGTAACCAATGTTGTCGATGAACCTGTTGTGCCGAAAATGCTCAAGTGCCCATCTTTGGTGATCCCTCATGAGTTTCTTTGTCCAATCACACTGGAAGTAATGATTGATCCTGTGATTGTCGCGAGTGGACAGACATATGACAGAGAAAGCATACAAAAGTGGTTCGACTCCAATCATGCGACATGTCCAAAAACGAGGGTAACTCTGCCTCACCTGTCAGTAGCGCCAAACTATGCTCTCAAAAATCTAATCCAGCAGTGGTGCGAGAAGAACAAGTTCAAGCTTCCAGTAAAGGAACCTTCCCAGGACCAGGAAAGCTCCTCCTCCGAGCACAAAGAGGAGATCACAACCCTGGTTGAAAAGCTATCGTCCTGTCAATTAGAAGTGCAAAGGAAGGCTGCCATGAAAATTCGTTTGCTCTCAAAAGAGAATCCCGAGAACAGAATTTTGATTGCGCGAAGTGGAGGAATCCCACCCTTAGTGCAACTTCTTTCCTATCCGGACTCTAAAATTCAACAGCATGCAGTGACAGCTCTACTAAACCTATCAATTGATGAAACAAACAAGAAGCTCATAACCAGGGAAGAGGCCATTCCAGCTATTATAGAAGTCTTGAAGACTGGAAGCACAGAAGCTAGAGAGAACTCTGCAGCAGCTTTGTTTAGCTTATCGATGCTTGATGAGAACAAAGTAAAAATAGGATTATCAGACGGCATTCCACCATTAGTAGATTTATTGCAAAATGGGACAATTAGAGGTAAAAAAGATGCTGCAACTGCATTGTTCAACTTATCTTTGAACCAAGCAAACAAGGCAAGGGCCATCAGTGCTGGCATTGTACCGCCTCTACTCAAGGTACTCAAGGACAGAAACTTGGGAATGGTGGATGAGTCTCTCTCCATCTTCTTGCTTCTTGCATCACACCCAGATGGACGGCAAGAGATTGGACAGCTCTCATTCATCGAGACTCTTGTTGACTTTATTCGAGAAGGAACCCCCAAGAACAAGGAATGTGCAACATCAGTACTTCTCGAGTTGGGGTCAAACAATTCATCTTTCTTACTCGCCTCACTTCAGTATGGAGTATATGAGCATTTGGTTGAGATCACAAAGAGTGGAACCAATAGAGCTCAAAGAAAGGCAAAAGCACTCCTACAACTCATAAGCAAATGTGAACATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

634

Amino Acids

70.85

Weight (kDa)

5.89

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB10_N PF25368 45 - 154 3.6e-33 PUB10-like, N-terminal domain
U-box PF04564 261 - 332 1.6e-24 U-box domain
ARM_ARMC5 PF24768 342 - 532 2.6e-11 ARMC5
ARM_PUB PF25598 354 - 629 1.1e-21 Plant U-box protein ARM repeat region
Arm PF00514 384 - 423 2.1e-11 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 386 - 577 1.3e-13 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 842, 1177
AccIII TCCGGA 2 cut(s) 217, 1219
AciI CCGC 5 cut(s) 59, 101, 179, 353, 1562
AclWI GGATC 3 cut(s) 252, 775, 821
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 5 cut(s) 306, 695, 1128, 1164, 1230
AcuI CTGAAG 2 cut(s) 269, 1778
AfaI GTAC 5 cut(s) 119, 195, 1560, 1578, 1746
AfiI CCNNNNNNNGG 3 cut(s) 217, 775, 1030
AflIII ACRYGT 1 cut(s) 902
AgsI TTSAA 9 cut(s) 74, 95, 323, 1000, 1079, 1235, 1336, 1507, 1519
AjnI CCWGG 4 cut(s) 1023, 1029, 1071, 1298
Alw21I GWGCWC 3 cut(s) 204, 1053, 1852
Alw26I GTCTC 2 cut(s) 1617, 1679
AlwI GGATC 3 cut(s) 252, 775, 821
Ama87I CYCGRG 2 cut(s) 1154, 1751
Aor13HI TCCGGA 2 cut(s) 217, 1219
AoxI GGCC 4 cut(s) 208, 267, 1308, 1539
ApeKI GCWGC 5 cut(s) 583, 1118, 1370, 1373, 1490
ApoI RAATTY 5 cut(s) 306, 695, 1128, 1164, 1230
Asp700I GAANNNNTTC 1 cut(s) 995
AspLEI GCGC 3 cut(s) 571, 946, 1177
AspS9I GGNCC 4 cut(s) 209, 598, 1027, 1539
AsuC2I CCSGG 1 cut(s) 212
AsuHPI GGTGA 5 cut(s) 16, 47, 454, 790, 923
AsuII TTCGAA 1 cut(s) 186
AvaI CYCGRG 2 cut(s) 1154, 1751
AvaII GGWCC 2 cut(s) 598, 1027
BaeGI GKGCMC 1 cut(s) 770
BalI TGGCCA 1 cut(s) 269
BanII GRGCYC 2 cut(s) 204, 1852
BauI CACGAG 1 cut(s) 293
BbsI GAAGAC 1 cut(s) 1343
Bbv12I GWGCWC 3 cut(s) 204, 1053, 1852
BbvI GCAGC 5 cut(s) 570, 1105, 1382, 1385, 1477
BccI CCATC 6 cut(s) 5, 232, 778, 1550, 1628, 1643
BceAI ACGGC 3 cut(s) 72, 1447, 1670
BciT130I CCWGG 4 cut(s) 1025, 1031, 1073, 1300
BcnI CCSGG 1 cut(s) 212
BcoDI GTCTC 2 cut(s) 1617, 1679
BfaI CTAG 2 cut(s) 578, 1356
BfmI CTRYAG 1 cut(s) 1368
BfoI RGCGCY 1 cut(s) 947
BisI GCNGC 7 cut(s) 102, 179, 584, 1119, 1371, 1374, 1491
BlsI GCNGC 7 cut(s) 103, 180, 585, 1120, 1372, 1375, 1492
BmcAI AGTACT 1 cut(s) 1746
Bme1390I CCNGG 5 cut(s) 212, 1025, 1031, 1073, 1300
Bme18I GGWCC 2 cut(s) 598, 1027
BmeT110I CYCGRG 2 cut(s) 1154, 1751
BmgT120I GGNCC 4 cut(s) 209, 598, 1027, 1539
BmiI GGNNCC 5 cut(s) 216, 629, 1017, 1714, 1840
BmrFI CCNGG 5 cut(s) 212, 1025, 1031, 1073, 1300
BmsI GCATC 3 cut(s) 1383, 1477, 1646
BpiI GAAGAC 1 cut(s) 1343
BplI GAGNNNNNCTC 4 cut(s) 907, 939, 1601, 1633
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 4 cut(s) 266, 746, 1556, 1565
BpuMI CCSGG 1 cut(s) 212
Bsa29I ATCGAT 2 cut(s) 681, 1391
BsaJI CCNNGG 3 cut(s) 1023, 1071, 1299
BsaWI WCCGGW 3 cut(s) 120, 217, 1219
Bsc4I CCNNNNNNNGG 3 cut(s) 217, 775, 1030
Bse1I ACTGG 3 cut(s) 816, 1007, 1345
Bse3DI GCAATG 1 cut(s) 504
BseAI TCCGGA 2 cut(s) 217, 1219
BseBI CCWGG 4 cut(s) 1025, 1031, 1073, 1300
BseCI ATCGAT 2 cut(s) 681, 1391
BseDI CCNNGG 3 cut(s) 1023, 1071, 1299
BseGI GGATG 5 cut(s) 16, 32, 47, 243, 1612
BseLI CCNNNNNNNGG 3 cut(s) 217, 775, 1030
BseMI GCAATG 1 cut(s) 504
BseMII CTCAG 3 cut(s) 146, 423, 683
BseNI ACTGG 3 cut(s) 816, 1007, 1345
BseRI GAGGAG 4 cut(s) 660, 1030, 1033, 1073
BseSI GKGCMC 1 cut(s) 770
BseXI GCAGC 5 cut(s) 570, 1105, 1382, 1385, 1477
BsgI GTGCAG 1 cut(s) 678
Bsh1236I CGCG 2 cut(s) 842, 1177
BshFI GGCC 4 cut(s) 210, 269, 1310, 1541
BshVI ATCGAT 2 cut(s) 681, 1391
BsiHKAI GWGCWC 3 cut(s) 204, 1053, 1852
BsiHKCI CYCGRG 2 cut(s) 1154, 1751
BsiSI CCGG 4 cut(s) 121, 212, 218, 1220
BslFI GGGAC 1 cut(s) 1480
BslI CCNNNNNNNGG 3 cut(s) 217, 775, 1030
BsmAI GTCTC 2 cut(s) 1617, 1679
BsmFI GGGAC 1 cut(s) 1480
BsmI GAATGC 1 cut(s) 1434
BsnI GGCC 4 cut(s) 210, 269, 1310, 1541
BsoBI CYCGRG 2 cut(s) 1154, 1751
Bsp119I TTCGAA 1 cut(s) 186
Bsp1286I GDGCHC 4 cut(s) 204, 770, 1053, 1852
Bsp13I TCCGGA 2 cut(s) 217, 1219
Bsp143I GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
Bsp68I TCGCGA 1 cut(s) 842
BspACI CCGC 5 cut(s) 59, 101, 179, 353, 1562
BspANI GGCC 4 cut(s) 210, 269, 1310, 1541
BspCNI CTCAG 3 cut(s) 147, 422, 682
BspDI ATCGAT 2 cut(s) 681, 1391
BspEI TCCGGA 2 cut(s) 217, 1219
BspFNI CGCG 2 cut(s) 842, 1177
BspHI TCATGA 2 cut(s) 358, 787
BspLI GGNNCC 5 cut(s) 216, 629, 1017, 1714, 1840
BspMAI CTGCAG 1 cut(s) 1372
BspPI GGATC 3 cut(s) 252, 775, 821
BspT104I TTCGAA 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 504
BsrI ACTGG 3 cut(s) 816, 1007, 1345
BssECI CCNNGG 3 cut(s) 1023, 1071, 1299
BssMI GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
BssSI CACGAG 1 cut(s) 293
Bst2BI CACGAG 1 cut(s) 293
Bst2UI CCWGG 4 cut(s) 1025, 1031, 1073, 1300
Bst4CI ACNGT 1 cut(s) 592
Bst6I CTCTTC 2 cut(s) 183, 1299
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 3 cut(s) 567, 1242, 1552
BstDEI CTNAG 4 cut(s) 155, 409, 669, 1198
BstF5I GGATG 5 cut(s) 16, 32, 47, 243, 1612
BstFNI CGCG 2 cut(s) 842, 1177
BstH2I RGCGCY 1 cut(s) 947
BstHHI GCGC 3 cut(s) 571, 946, 1177
BstKTI GATC 6 cut(s) 247, 685, 783, 829, 1065, 1827
BstMAI GTCTC 2 cut(s) 1617, 1679
BstMBI GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
BstNI CCWGG 4 cut(s) 1025, 1031, 1073, 1300
BstNSI RCATGY 2 cut(s) 906, 1244
BstSCI CCNGG 5 cut(s) 210, 1023, 1029, 1071, 1298
BstSFI CTRYAG 1 cut(s) 1368
BstSLI GKGCMC 1 cut(s) 770
BstUI CGCG 2 cut(s) 842, 1177
BstV1I GCAGC 5 cut(s) 570, 1105, 1382, 1385, 1477
BstV2I GAAGAC 1 cut(s) 1343
BstX2I RGATCY 1 cut(s) 244
BstYI RGATCY 1 cut(s) 244
Bsu15I ATCGAT 2 cut(s) 681, 1391
BsuRI GGCC 4 cut(s) 210, 269, 1310, 1541
BsuTUI ATCGAT 2 cut(s) 681, 1391
BtsCI GGATG 5 cut(s) 16, 32, 47, 243, 1612
BtsI GCAGTG 2 cut(s) 983, 1251
BtsIMutI CAGTG 4 cut(s) 809, 983, 1251, 1552
BtuMI TCGCGA 1 cut(s) 842
Cac8I GCNNGC 3 cut(s) 567, 1242, 1552
CciI TCATGA 2 cut(s) 358, 787
CfoI GCGC 3 cut(s) 571, 946, 1177
Cfr13I GGNCC 4 cut(s) 209, 598, 1027, 1539
ClaI ATCGAT 2 cut(s) 681, 1391
CseI GACGC 2 cut(s) 136, 338
Csp6I GTAC 5 cut(s) 118, 194, 1559, 1577, 1745
CviQI GTAC 5 cut(s) 118, 194, 1559, 1577, 1745
DdeI CTNAG 4 cut(s) 155, 409, 669, 1198
DpnI GATC 6 cut(s) 246, 684, 782, 828, 1064, 1826
DpnII GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 183, 1299
EarI CTCTTC 2 cut(s) 183, 1299
EciI GGCGGA 1 cut(s) 74
Ecl136II GAGCTC 2 cut(s) 202, 1850
Eco24I GRGCYC 2 cut(s) 204, 1852
Eco47I GGWCC 2 cut(s) 598, 1027
Eco53kI GAGCTC 2 cut(s) 202, 1850
Eco57I CTGAAG 2 cut(s) 269, 1778
Eco88I CYCGRG 2 cut(s) 1154, 1751
EcoICRI GAGCTC 2 cut(s) 202, 1850
EcoO109I RGGNCCY 1 cut(s) 598
EcoRII CCWGG 4 cut(s) 1023, 1029, 1071, 1298
EcoT38I GRGCYC 2 cut(s) 204, 1852
FaqI GGGAC 1 cut(s) 1480
FauNDI CATATG 1 cut(s) 856
Fnu4HI GCNGC 7 cut(s) 102, 179, 584, 1119, 1371, 1374, 1491
FokI GGATG 5 cut(s) 23, 39, 54, 250, 1619
FriOI GRGCYC 2 cut(s) 204, 1852
Fsp4HI GCNGC 7 cut(s) 102, 179, 584, 1119, 1371, 1374, 1491
FspBI CTAG 2 cut(s) 578, 1356
GlaI GCGC 3 cut(s) 570, 945, 1176
GluI GCNGC 7 cut(s) 102, 179, 584, 1119, 1371, 1374, 1491
HaeII RGCGCY 1 cut(s) 947
HaeIII GGCC 4 cut(s) 210, 269, 1310, 1541
HapII CCGG 4 cut(s) 121, 212, 218, 1220
HgaI GACGC 2 cut(s) 136, 338
HhaI GCGC 3 cut(s) 571, 946, 1177
Hin6I GCGC 3 cut(s) 569, 944, 1175
HinP1I GCGC 3 cut(s) 569, 944, 1175
HincII GTYRAC 1 cut(s) 1696
HindII GTYRAC 1 cut(s) 1696
HindIII AAGCTT 2 cut(s) 167, 1001
HinfI GANTC 8 cut(s) 70, 91, 887, 1150, 1188, 1223, 1610, 1687
HpaII CCGG 4 cut(s) 121, 212, 218, 1220
HphI GGTGA 5 cut(s) 16, 47, 454, 790, 923
Hpy166II GTNNAC 3 cut(s) 848, 1696, 1895
Hpy188I TCNGA 7 cut(s) 156, 249, 412, 422, 701, 1048, 1429
Hpy8I GTNNAC 3 cut(s) 848, 1696, 1895
HpyAV CCTTC 8 cut(s) 26, 32, 161, 200, 247, 1029, 1108, 1703
HpyCH4III ACNGT 1 cut(s) 592
HpyF3I CTNAG 4 cut(s) 155, 409, 669, 1198
HspAI GCGC 3 cut(s) 569, 944, 1175
Kpn2I TCCGGA 2 cut(s) 217, 1219
Kzo9I GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
LmnI GCTCC 1 cut(s) 1043
Lsp1109I GCAGC 5 cut(s) 570, 1105, 1382, 1385, 1477
LweI GCATC 3 cut(s) 1383, 1477, 1646
MaeI CTAG 2 cut(s) 578, 1356
MaeIII GTNAC 6 cut(s) 143, 290, 326, 721, 919, 1246
MalI GATC 6 cut(s) 246, 684, 782, 828, 1064, 1826
MboI GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
MboII GAAGA 7 cut(s) 200, 262, 677, 1000, 1316, 1348, 1615
MfeI CAATTG 3 cut(s) 318, 615, 1269
MflI RGATCY 1 cut(s) 244
MhlI GDGCHC 4 cut(s) 204, 770, 1053, 1852
MlsI TGGCCA 1 cut(s) 269
MluNI TGGCCA 1 cut(s) 269
MlyI GAGTC 4 cut(s) 881, 1217, 1619, 1681
MmeI TCCRAC 1 cut(s) 60
Mox20I TGGCCA 1 cut(s) 269
MroI TCCGGA 2 cut(s) 217, 1219
MroXI GAANNNNTTC 1 cut(s) 995
MscI TGGCCA 1 cut(s) 269
MseI TTAA 4 cut(s) 453, 636, 690, 1903
MslI CAYNNNNRTG 1 cut(s) 1647
Msp20I TGGCCA 1 cut(s) 269
MspI CCGG 4 cut(s) 121, 212, 218, 1220
MspR9I CCNGG 5 cut(s) 212, 1025, 1031, 1073, 1300
MunI CAATTG 3 cut(s) 318, 615, 1269
Mva1269I GAATGC 1 cut(s) 1434
MvaI CCWGG 4 cut(s) 1025, 1031, 1073, 1300
MvnI CGCG 2 cut(s) 842, 1177
NciI CCSGG 1 cut(s) 212
NdeI CATATG 1 cut(s) 856
NdeII GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
NlaIV GGNNCC 5 cut(s) 216, 629, 1017, 1714, 1840
NmuCI GTSAC 3 cut(s) 290, 326, 1246
NruI TCGCGA 1 cut(s) 842
NspI RCATGY 2 cut(s) 906, 1244
NspV TTCGAA 1 cut(s) 186
PaeI GCATGC 1 cut(s) 1244
PaeR7I CTCGAG 1 cut(s) 1751
PagI TCATGA 2 cut(s) 358, 787
PciI ACATGT 1 cut(s) 902
PctI GAATGC 1 cut(s) 1434
PdmI GAANNNNTTC 1 cut(s) 995
PfeI GAWTC 4 cut(s) 70, 91, 1150, 1188
PflFI GACNNNGTC 1 cut(s) 332
PkrI GCNGC 7 cut(s) 103, 180, 585, 1120, 1372, 1375, 1492
PleI GAGTC 4 cut(s) 881, 1217, 1618, 1681
PpsI GAGTC 4 cut(s) 881, 1217, 1618, 1681
PpuMI RGGWCCY 1 cut(s) 598
PscI ACATGT 1 cut(s) 902
Psp124BI GAGCTC 2 cut(s) 204, 1852
Psp5II RGGWCCY 1 cut(s) 598
Psp6I CCWGG 4 cut(s) 1023, 1029, 1071, 1298
PspGI CCWGG 4 cut(s) 1023, 1029, 1071, 1298
PspN4I GGNNCC 5 cut(s) 216, 629, 1017, 1714, 1840
PspPI GGNCC 4 cut(s) 209, 598, 1027, 1539
PspPPI RGGWCCY 1 cut(s) 598
PstI CTGCAG 1 cut(s) 1372
PsuI RGATCY 1 cut(s) 244
PsyI GACNNNGTC 1 cut(s) 332
RruI TCGCGA 1 cut(s) 842
RsaI GTAC 5 cut(s) 119, 195, 1560, 1578, 1746
RsaNI GTAC 5 cut(s) 118, 194, 1559, 1577, 1745
RseI CAYNNNNRTG 1 cut(s) 1647
SacI GAGCTC 2 cut(s) 204, 1852
SaqAI TTAA 4 cut(s) 453, 636, 690, 1903
SatI GCNGC 7 cut(s) 102, 179, 584, 1119, 1371, 1374, 1491
Sau3AI GATC 6 cut(s) 244, 682, 780, 826, 1062, 1824
Sau96I GGNCC 4 cut(s) 209, 598, 1027, 1539
ScaI AGTACT 1 cut(s) 1746
SchI GAGTC 4 cut(s) 881, 1217, 1619, 1681
ScrFI CCNGG 5 cut(s) 212, 1025, 1031, 1073, 1300
SduI GDGCHC 4 cut(s) 204, 770, 1053, 1852
SfaNI GCATC 3 cut(s) 1383, 1477, 1646
SfcI CTRYAG 1 cut(s) 1368
Sfr274I CTCGAG 1 cut(s) 1751
SfuI TTCGAA 1 cut(s) 186
SinI GGWCC 2 cut(s) 598, 1027
SlaI CTCGAG 1 cut(s) 1751
SmiMI CAYNNNNRTG 1 cut(s) 1647
SmlI CTYRAG 5 cut(s) 281, 761, 1571, 1580, 1751
SmoI CTYRAG 5 cut(s) 281, 761, 1571, 1580, 1751
SphI GCATGC 1 cut(s) 1244
SsiI CCGC 5 cut(s) 59, 101, 179, 353, 1562
SspMI CTAG 2 cut(s) 578, 1356
SstI GAGCTC 2 cut(s) 204, 1852
StyD4I CCNGG 5 cut(s) 210, 1023, 1029, 1071, 1298
TaaI ACNGT 1 cut(s) 592
TatI WGTACW 1 cut(s) 1744
TauI GCSGC 2 cut(s) 104, 181
TfiI GAWTC 4 cut(s) 70, 91, 1150, 1188
Tru1I TTAA 4 cut(s) 453, 636, 690, 1903
Tru9I TTAA 4 cut(s) 453, 636, 690, 1903
TscAI CASTG 4 cut(s) 816, 983, 1251, 1552
TseFI GTSAC 3 cut(s) 290, 326, 1246
TseI GCWGC 5 cut(s) 583, 1118, 1370, 1373, 1490
Tsp45I GTSAC 3 cut(s) 290, 326, 1246
TspDTI ATGAA 8 cut(s) 179, 338, 347, 753, 1139, 1290, 1669, 1761
TspRI CASTG 4 cut(s) 816, 983, 1251, 1552
Tth111I GACNNNGTC 1 cut(s) 332
VpaK11BI GGWCC 2 cut(s) 598, 1027
XapI RAATTY 5 cut(s) 306, 695, 1128, 1164, 1230
XceI RCATGY 2 cut(s) 906, 1244
XhoI CTCGAG 1 cut(s) 1751
XmnI GAANNNNTTC 1 cut(s) 995
XspI CTAG 2 cut(s) 578, 1356
ZrmI AGTACT 1 cut(s) 1746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.