Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003352

Physical Location & Seq

Genomic Coordinates Reverse (-)

448250 .. 450799

Gene Structure 2550 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g00890.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAACACTGCAGAATGGAACATTACGAAGCAAAATAAACAGCACCATTTCCTCTCATTTCGTCACAGTAAAACAATCAACGAGAAGAATCACATGGATAGTCCAACCTCCCCTGACAAAAGTCACAAAACCCCGCTTCTCCCAGTCGAGGATCATTCAATCCAAAAACCAAAGAGCAGCTGCTTCTGTTCGTCATTGAAATCAATCTTAGCATCAAACAATCTCTCAATTTTACTAGGACCTCTTTCGAGCACCATTGTGTGCCTTTTTGTAAAGTTCGATGGCAATGTGACTAGCCGGAACATGCTAGCTGTGCTTGCTTGGATCTTCGCCTGGTGGCTCACAGAGGCTCTGCCTATGCCAATAACATCAATGTCTCCACTCTTTCTCTTCCCATTCTTCGGCATTTCCTCCGCGGATGAGGTTGCACACTCGTACATGAACGATGTCATTGCCCTTGTTCTTGGAAGCTTTATATTGGCTCTTGCTGTTGAGCATTATAACATCCACAAAAGATTGGCCTTAAACATTACACTGTTATTCTGCGGAGATCCTCTGAATCCACCATTGCTGCTTCTGGGAATATGTGCAACCACAGCTTTCGTAAGCATGTGGATGCACAACGTGGCAACGGCAGTGATGATGGTACCGGTAGCCACCGGAATTCTTCATCGTTTTCCGACCGGTCCGAACCAGCCAGTCGTTGTAGGCAAGTTTTGCAGAGCTGTGATTCTAGGGGTGATATACTCAGCAACCATTGGAGGGATGAGCACTCTCACTGGGACAGGTGTGAATCTCATACTGGTTGGAATGTGGAAGAGCTATTTTCCAGAAGCAGAGGCGATCACTTTCAGCACCTGGTTTCTTTTCGGGTTCCCTTCGGCTTTGTTACTGTTCTTCGCAATGTGGGCGGTCCTTTGCTACTTGTATTGCTCGAGGAGCTCGGGGCAGGCTCTCTCTCCTTATTTCGATAAGAGCTTTTTGCAGAAAGAGCTCGAAATGTTGGGTCCAATGACTTTTGCTGAGAAGATGGTTTTGGCTTTGTTTTCGATGCTGATTTTTTTGTGGATGACAAGAAGCATAACAGATGATATTCCGGGCTGGGGAGTCCTCTTTGACGGGCGTGCTGGCGATGGAACTGCGAGTGCTATGGTGGCAACTTTGTTGTTTGTTTTTCCAAGCAAAAAGCAGAAGGGTGAGAAGTTGATGGACTGGAACAAATGTAAGCAGCTACCCTGGAACATAATATTGTTACTAGGTGCTGGTTTGGCCATAGCAGACGGAGTTCGATCTAGTGGCCTTGCAGATATATTGTCGAAAACATTGGATTTCTTGGAAGCAGTCCCATATTTCGCGATGGCGCCTGCTGTGTGTCTCATAAGCAGCACCATCACTGAGTTGATTACATCAAACAATGCCACTACGACGCTTATTGTGCCTCTCCTAATTCAGATGGCAAAAACTATGCATGTGCATCCACTGCTTCTTATGGTTCCTGGAGGCATTGGTGCGCAGTTTGCTTTCTTGCTTCCCACATCAACCCCTTCAAATACAGTTGGATTTGCTACCGGCCACGTTGAAATCCGGGATATGATCAAGGTTGGTTTGGCATTAAAGATTGCTGGGATTGCTGTGGTTTCTGTTTTGATGCCTACACTCGGAGCGTTTGTCTTCGGGACAAATGCACGAGTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006873 GO:0006885 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071423 GO:0071702 GO:0098656 GO:0098771 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

566

Amino Acids

61.62

Weight (kDa)

8.59

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	99 - 550	5.6e-55	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	110 - 497	1e-42	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47560
fragaria_vesca	FvH4_3g00890 FvH4_3g00891 FvH4_3g00891
malus_domestica	MD05G1358600.v1.1 MD10G1332900.v1.1 MD10G1333000.v1.1
prunus_persica	Prupe.4G009400_v2.0.a1 Prupe.4G009500_v2.0.a1 Prupe.4G009500_v2.0.a1
pyrus_communis	pycom05g32430 pycom10g28220 pycom10g28230 pycom10g28300 pycom10g28330
rosa_chinensis	RchiOBHm_Chr5g0001361 RchiOBHm_Chr5g0001371
rosa_laevigata	RLG00000030922 RLG00000030923
rosa_multiflora	Rmu_co8451069.1_g000001 Rmu_sc0001706.1_g000004 Rmu_sc0003749.1_g000019 Rmu_sc0003900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00074990
rosa_rugosa	Rorug04G0390100.1 Rorug04G0390200
rosa_samantha	Rh5AG010400 Rh5AG010500 Rh5BG013100 Rh5BG013300 Rh5CG011400 Rh5CG011500 Rh5DG010800 Rh5DG010900
rosa_wichuraiana	Rw5G001000 Rw5G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	501
Acc16I	TGCGCA	1 cut(s)	1512
Acc65I	GGTACC	1 cut(s)	646
AccB1I	GGYRCC	2 cut(s)	646, 1360
AccII	CGCG	2 cut(s)	416, 1355
AciI	CCGC	5 cut(s)	134, 414, 416, 546, 911
AclWI	GGATC	3 cut(s)	159, 332, 545
AcoI	YGGCCR	2 cut(s)	1269, 1570
AcsI	RAATTY	1 cut(s)	663
AcyI	GRCGYC	1 cut(s)	1361
AdeI	CACNNNGTG	1 cut(s)	625
AfaI	GTAC	2 cut(s)	437, 648
AfiI	CCNNNNNNNGG	5 cut(s)	148, 401, 762, 1103, 1658
AgeI	ACCGGT	2 cut(s)	649, 683
AgsI	TTSAA	5 cut(s)	159, 199, 1548, 1580, 1694
AjnI	CCWGG	4 cut(s)	332, 857, 1235, 1495
AjuI	GAANNNNNNNTTGG	2 cut(s)	1019, 1051
AleI	CACNNNNGTG	1 cut(s)	257
Alw21I	GWGCWC	4 cut(s)	254, 773, 944, 996
Alw26I	GTCTC	2 cut(s)	381, 1379
AlwI	GGATC	3 cut(s)	159, 332, 545
AlwNI	CAGNNNCTG	1 cut(s)	858
Ama87I	CYCGRG	2 cut(s)	934, 943
AoxI	GGCC	4 cut(s)	519, 1269, 1297, 1570
ApeKI	GCWGC	5 cut(s)	177, 180, 571, 1228, 1383
ApoI	RAATTY	1 cut(s)	663
AsiGI	ACCGGT	2 cut(s)	649, 683
Asp718I	GGTACC	1 cut(s)	646
AspLEI	GCGC	2 cut(s)	1363, 1513
AspS9I	GGNCC	4 cut(s)	239, 686, 913, 1007
AsuC2I	CCSGG	2 cut(s)	1098, 1586
AsuHPI	GGTGA	2 cut(s)	751, 1208
AsuNHI	GCTAGC	1 cut(s)	307
AvaI	CYCGRG	2 cut(s)	934, 943
AvaII	GGWCC	4 cut(s)	239, 686, 913, 1007
BalI	TGGCCA	1 cut(s)	1271
BanI	GGYRCC	2 cut(s)	646, 1360
BanII	GRGCYC	2 cut(s)	944, 996
BauI	CACGAG	1 cut(s)	1686
BbsI	GAAGAC	1 cut(s)	1663
Bbv12I	GWGCWC	4 cut(s)	254, 773, 944, 996
BbvI	GCAGC	5 cut(s)	167, 189, 558, 1240, 1395
BccI	CCATC	8 cut(s)	275, 637, 1024, 1127, 1201, 1351, 1397, 1447
BceAI	ACGGC	1 cut(s)	648
BcgI	CGANNNNNNTGC	4 cut(s)	434, 468, 1121, 1155
BciT130I	CCWGG	4 cut(s)	334, 859, 1237, 1497
BclI	TGATCA	1 cut(s)	1593
BcnI	CCSGG	2 cut(s)	1098, 1586
BcoDI	GTCTC	2 cut(s)	381, 1379
BfaI	CTAG	6 cut(s)	236, 294, 308, 734, 1256, 1293
BfmI	CTRYAG	1 cut(s)	9
BfoI	RGCGCY	1 cut(s)	1364
BisI	GCNGC	5 cut(s)	178, 181, 572, 1229, 1384
BlsI	GCNGC	5 cut(s)	179, 182, 573, 1230, 1385
Bme1390I	CCNGG	6 cut(s)	334, 859, 1098, 1237, 1497, 1586
Bme18I	GGWCC	4 cut(s)	239, 686, 913, 1007
BmeT110I	CYCGRG	2 cut(s)	934, 943
BmgT120I	GGNCC	4 cut(s)	239, 686, 913, 1007
BmiI	GGNNCC	5 cut(s)	648, 875, 1008, 1362, 1494
BmrFI	CCNGG	6 cut(s)	334, 859, 1098, 1237, 1497, 1586
BmrI	ACTGGG	2 cut(s)	137, 789
BmsI	GCATC	5 cut(s)	221, 606, 1041, 1483, 1638
BmtI	GCTAGC	1 cut(s)	311
BmuI	ACTGGG	2 cut(s)	137, 789
BoxI	GACNNNNGTC	1 cut(s)	120
BpiI	GAAGAC	1 cut(s)	1663
BpmI	CTGGAG	1 cut(s)	1518
BpuMI	CCSGG	2 cut(s)	1098, 1586
BsaHI	GRCGYC	1 cut(s)	1361
BsaJI	CCNNGG	2 cut(s)	414, 1235
BsaWI	WCCGGW	3 cut(s)	649, 659, 683
BsaXI	ACNNNNNCTCC	2 cut(s)	1653, 1683
Bsc4I	CCNNNNNNNGG	5 cut(s)	148, 401, 762, 1103, 1658
Bse118I	RCCGGY	3 cut(s)	649, 683, 1568
Bse1I	ACTGG	5 cut(s)	143, 698, 784, 807, 1217
Bse3DI	GCAATG	4 cut(s)	292, 450, 566, 909
BseBI	CCWGG	4 cut(s)	334, 859, 1237, 1497
BseDI	CCNNGG	2 cut(s)	414, 1235
BseGI	GGATG	6 cut(s)	424, 504, 621, 771, 1074, 1474
BseLI	CCNNNNNNNGG	5 cut(s)	148, 401, 762, 1103, 1658
BseMI	GCAATG	4 cut(s)	292, 450, 566, 909
BseMII	CTCAG	3 cut(s)	762, 1014, 1386
BseNI	ACTGG	5 cut(s)	143, 698, 784, 807, 1217
BseRI	GAGGAG	1 cut(s)	952
BseXI	GCAGC	5 cut(s)	167, 189, 558, 1240, 1395
BseYI	CCCAGC	2 cut(s)	1101, 1622
Bsh1236I	CGCG	2 cut(s)	416, 1355
Bsh1285I	CGRYCG	1 cut(s)	684
BshFI	GGCC	4 cut(s)	521, 1271, 1299, 1572
BshNI	GGYRCC	2 cut(s)	646, 1360
BshTI	ACCGGT	2 cut(s)	649, 683
BsiEI	CGRYCG	1 cut(s)	684
BsiHKAI	GWGCWC	4 cut(s)	254, 773, 944, 996
BsiHKCI	CYCGRG	2 cut(s)	934, 943
BsiSI	CCGG	7 cut(s)	298, 650, 660, 684, 1097, 1569, 1585
BslFI	GGGAC	3 cut(s)	796, 1328, 1690
BslI	CCNNNNNNNGG	5 cut(s)	148, 401, 762, 1103, 1658
BsmAI	GTCTC	2 cut(s)	381, 1379
BsmFI	GGGAC	3 cut(s)	796, 1328, 1690
BsnI	GGCC	4 cut(s)	521, 1271, 1299, 1572
BsoBI	CYCGRG	2 cut(s)	934, 943
Bsp1286I	GDGCHC	4 cut(s)	254, 773, 944, 996
Bsp143I	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
Bsp68I	TCGCGA	1 cut(s)	1355
BspACI	CCGC	5 cut(s)	134, 414, 416, 546, 911
BspANI	GGCC	4 cut(s)	521, 1271, 1299, 1572
BspCNI	CTCAG	3 cut(s)	761, 1015, 1387
BspFNI	CGCG	2 cut(s)	416, 1355
BspLI	GGNNCC	5 cut(s)	648, 875, 1008, 1362, 1494
BspMAI	CTGCAG	1 cut(s)	13
BspOI	GCTAGC	1 cut(s)	311
BspPI	GGATC	3 cut(s)	159, 332, 545
BspQI	GCTCTTC	1 cut(s)	812
BspT107I	GGYRCC	2 cut(s)	646, 1360
BsrDI	GCAATG	4 cut(s)	292, 450, 566, 909
BsrFI	RCCGGY	3 cut(s)	649, 683, 1568
BsrI	ACTGG	5 cut(s)	143, 698, 784, 807, 1217
BssAI	RCCGGY	3 cut(s)	649, 683, 1568
BssECI	CCNNGG	2 cut(s)	414, 1235
BssMI	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
BssNI	GRCGYC	1 cut(s)	1361
BssSI	CACGAG	1 cut(s)	1686
Bst2BI	CACGAG	1 cut(s)	1686
Bst2UI	CCWGG	4 cut(s)	334, 859, 1237, 1497
Bst4CI	ACNGT	4 cut(s)	68, 537, 894, 1555
Bst6I	CTCTTC	2 cut(s)	395, 812
BstACI	GRCGYC	1 cut(s)	1361
BstAPI	GCANNNNNTGC	2 cut(s)	717, 1480
BstC8I	GCNNGC	6 cut(s)	309, 318, 951, 1125, 1129, 1365
BstDEI	CTNAG	4 cut(s)	208, 748, 1023, 1395
BstDSI	CCRYGG	1 cut(s)	414
BstF5I	GGATG	6 cut(s)	424, 504, 621, 771, 1074, 1474
BstFNI	CGCG	2 cut(s)	416, 1355
BstH2I	RGCGCY	1 cut(s)	1364
BstHHI	GCGC	2 cut(s)	1363, 1513
BstKTI	GATC	6 cut(s)	154, 327, 553, 846, 1292, 1596
BstMAI	GTCTC	2 cut(s)	381, 1379
BstMBI	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
BstMCI	CGRYCG	1 cut(s)	684
BstNI	CCWGG	4 cut(s)	334, 859, 1237, 1497
BstNSI	RCATGY	3 cut(s)	307, 613, 1472
BstPAI	GACNNNNGTC	1 cut(s)	120
BstSCI	CCNGG	6 cut(s)	332, 857, 1096, 1235, 1495, 1584
BstSFI	CTRYAG	1 cut(s)	9
BstUI	CGCG	2 cut(s)	416, 1355
BstV1I	GCAGC	5 cut(s)	167, 189, 558, 1240, 1395
BstV2I	GAAGAC	1 cut(s)	1663
BstX2I	RGATCY	2 cut(s)	324, 550
BstYI	RGATCY	2 cut(s)	324, 550
BsuRI	GGCC	4 cut(s)	521, 1271, 1299, 1572
BtgI	CCRYGG	1 cut(s)	414
BtgZI	GCGATG	2 cut(s)	1146, 1370
BtsCI	GGATG	6 cut(s)	424, 504, 621, 771, 1074, 1474
BtsI	GCAGTG	3 cut(s)	6, 642, 1478
BtsIMutI	CAGTG	6 cut(s)	6, 533, 642, 777, 1392, 1478
BtuMI	TCGCGA	1 cut(s)	1355
Cac8I	GCNNGC	6 cut(s)	309, 318, 951, 1125, 1129, 1365
CaiI	CAGNNNCTG	1 cut(s)	858
CfoI	GCGC	2 cut(s)	1363, 1513
Cfr10I	RCCGGY	3 cut(s)	649, 683, 1568
Cfr13I	GGNCC	4 cut(s)	239, 686, 913, 1007
Cfr42I	CCGCGG	1 cut(s)	417
CpoI	CGGWCCG	1 cut(s)	686
CseI	GACGC	1 cut(s)	1435
CsiI	ACCWGGT	1 cut(s)	857
Csp6I	GTAC	2 cut(s)	436, 647
CspAI	ACCGGT	2 cut(s)	649, 683
CspI	CGGWCCG	1 cut(s)	686
CviAII	CATG	5 cut(s)	94, 304, 439, 610, 1469
CviQI	GTAC	2 cut(s)	436, 647
DdeI	CTNAG	4 cut(s)	208, 748, 1023, 1395
DinI	GGCGCC	1 cut(s)	1362
DpnI	GATC	6 cut(s)	153, 326, 552, 845, 1291, 1595
DpnII	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
DraIII	CACNNNGTG	1 cut(s)	625
EaeI	YGGCCR	2 cut(s)	1269, 1570
Eam1104I	CTCTTC	2 cut(s)	395, 812
EarI	CTCTTC	2 cut(s)	395, 812
Ecl136II	GAGCTC	2 cut(s)	942, 994
Eco24I	GRGCYC	2 cut(s)	944, 996
Eco47I	GGWCC	4 cut(s)	239, 686, 913, 1007
Eco53kI	GAGCTC	2 cut(s)	942, 994
Eco88I	CYCGRG	2 cut(s)	934, 943
EcoICRI	GAGCTC	2 cut(s)	942, 994
EcoO109I	RGGNCCY	1 cut(s)	239
EcoRI	GAATTC	1 cut(s)	663
EcoRII	CCWGG	4 cut(s)	332, 857, 1235, 1495
EcoT22I	ATGCAT	1 cut(s)	1470
EcoT38I	GRGCYC	2 cut(s)	944, 996
EgeI	GGCGCC	1 cut(s)	1362
EheI	GGCGCC	1 cut(s)	1362
FaeI	CATG	5 cut(s)	97, 307, 442, 613, 1472
FaqI	GGGAC	3 cut(s)	796, 1328, 1690
FatI	CATG	5 cut(s)	93, 303, 438, 609, 1468
FauI	CCCGC	1 cut(s)	141
FbaI	TGATCA	1 cut(s)	1593
Fnu4HI	GCNGC	5 cut(s)	178, 181, 572, 1229, 1384
FokI	GGATG	6 cut(s)	431, 491, 628, 778, 1081, 1461
FriOI	GRGCYC	2 cut(s)	944, 996
Fsp4HI	GCNGC	5 cut(s)	178, 181, 572, 1229, 1384
FspBI	CTAG	6 cut(s)	236, 294, 308, 734, 1256, 1293
FspI	TGCGCA	1 cut(s)	1512
GlaI	GCGC	2 cut(s)	1362, 1512
GluI	GCNGC	5 cut(s)	178, 181, 572, 1229, 1384
GsaI	CCCAGC	2 cut(s)	1105, 1626
GsuI	CTGGAG	1 cut(s)	1518
HaeII	RGCGCY	1 cut(s)	1364
HaeIII	GGCC	4 cut(s)	521, 1271, 1299, 1572
HapII	CCGG	7 cut(s)	298, 650, 660, 684, 1097, 1569, 1585
HgaI	GACGC	1 cut(s)	1435
HhaI	GCGC	2 cut(s)	1363, 1513
Hin1I	GRCGYC	1 cut(s)	1361
Hin1II	CATG	5 cut(s)	97, 307, 442, 613, 1472
Hin6I	GCGC	2 cut(s)	1361, 1511
HinP1I	GCGC	2 cut(s)	1361, 1511
HindIII	AAGCTT	1 cut(s)	469
HinfI	GANTC	5 cut(s)	88, 559, 730, 793, 1107
HpaII	CCGG	7 cut(s)	298, 650, 660, 684, 1097, 1569, 1585
HphI	GGTGA	2 cut(s)	751, 1208
Hpy188I	TCNGA	5 cut(s)	558, 681, 690, 1452, 1661
Hpy188III	TCNNGA	3 cut(s)	830, 1354, 1675
Hpy99I	CGWCG	1 cut(s)	1429
HpyAV	CCTTC	3 cut(s)	888, 1186, 1554
HpyCH4III	ACNGT	4 cut(s)	68, 537, 894, 1555
HpyCH4IV	ACGT	2 cut(s)	624, 1575
HpyF3I	CTNAG	4 cut(s)	208, 748, 1023, 1395
HpySE526I	ACGT	2 cut(s)	624, 1575
Hsp92I	GRCGYC	1 cut(s)	1361
Hsp92II	CATG	5 cut(s)	97, 307, 442, 613, 1472
HspAI	GCGC	2 cut(s)	1361, 1511
KasI	GGCGCC	1 cut(s)	1360
KpnI	GGTACC	1 cut(s)	650
Ksp22I	TGATCA	1 cut(s)	1593
KspI	CCGCGG	1 cut(s)	417
Kzo9I	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	2 cut(s)	939, 1661
Lsp1109I	GCAGC	5 cut(s)	167, 189, 558, 1240, 1395
LweI	GCATC	5 cut(s)	221, 606, 1041, 1483, 1638
MabI	ACCWGGT	1 cut(s)	857
MaeI	CTAG	6 cut(s)	236, 294, 308, 734, 1256, 1293
MaeII	ACGT	2 cut(s)	624, 1575
MaeIII	GTNAC	5 cut(s)	62, 122, 289, 888, 1251
MalI	GATC	6 cut(s)	153, 326, 552, 845, 1291, 1595
MboI	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
MboII	GAAGA	9 cut(s)	97, 319, 382, 391, 659, 829, 889, 1039, 1663
MflI	RGATCY	2 cut(s)	324, 550
MhlI	GDGCHC	4 cut(s)	254, 773, 944, 996
MlsI	TGGCCA	1 cut(s)	1271
MluCI	AATT	3 cut(s)	228, 663, 1446
MluNI	TGGCCA	1 cut(s)	1271
Mly113I	GGCGCC	1 cut(s)	1361
MlyI	GAGTC	1 cut(s)	1116
MmeI	TCCRAC	4 cut(s)	128, 704, 787, 1537
Mox20I	TGGCCA	1 cut(s)	1271
Mph1103I	ATGCAT	1 cut(s)	1470
MscI	TGGCCA	1 cut(s)	1271
MseI	TTAA	2 cut(s)	524, 1613
MslI	CAYNNNNRTG	2 cut(s)	257, 614
Msp20I	TGGCCA	1 cut(s)	1271
MspA1I	CMGCKG	2 cut(s)	180, 416
MspI	CCGG	7 cut(s)	298, 650, 660, 684, 1097, 1569, 1585
MspR9I	CCNGG	6 cut(s)	334, 859, 1098, 1237, 1497, 1586
MvaI	CCWGG	4 cut(s)	334, 859, 1237, 1497
MvnI	CGCG	2 cut(s)	416, 1355
NarI	GGCGCC	1 cut(s)	1361
NciI	CCSGG	2 cut(s)	1098, 1586
NdeII	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
NheI	GCTAGC	1 cut(s)	307
NlaIII	CATG	5 cut(s)	97, 307, 442, 613, 1472
NlaIV	GGNNCC	5 cut(s)	648, 875, 1008, 1362, 1494
NmuCI	GTSAC	3 cut(s)	62, 122, 289
NruI	TCGCGA	1 cut(s)	1355
NsbI	TGCGCA	1 cut(s)	1512
NsiI	ATGCAT	1 cut(s)	1470
NspI	RCATGY	3 cut(s)	307, 613, 1472
OliI	CACNNNNGTG	1 cut(s)	257
PaeR7I	CTCGAG	1 cut(s)	934
PciSI	GCTCTTC	1 cut(s)	812
PfeI	GAWTC	4 cut(s)	88, 559, 730, 793
PfoI	TCCNGGA	2 cut(s)	1495, 1584
PinAI	ACCGGT	2 cut(s)	649, 683
PkrI	GCNGC	5 cut(s)	179, 182, 573, 1230, 1385
PleI	GAGTC	1 cut(s)	1115
PluTI	GGCGCC	1 cut(s)	1364
PpsI	GAGTC	1 cut(s)	1115
PpuMI	RGGWCCY	1 cut(s)	239
PshAI	GACNNNNGTC	1 cut(s)	120
PsiI	TTATAA	1 cut(s)	501
Psp124BI	GAGCTC	2 cut(s)	944, 996
Psp5II	RGGWCCY	1 cut(s)	239
Psp6I	CCWGG	4 cut(s)	332, 857, 1235, 1495
PspFI	CCCAGC	2 cut(s)	1101, 1622
PspGI	CCWGG	4 cut(s)	332, 857, 1235, 1495
PspN4I	GGNNCC	5 cut(s)	648, 875, 1008, 1362, 1494
PspPI	GGNCC	4 cut(s)	239, 686, 913, 1007
PspPPI	RGGWCCY	1 cut(s)	239
PspXI	VCTCGAGB	1 cut(s)	934
PstI	CTGCAG	1 cut(s)	13
PstNI	CAGNNNCTG	1 cut(s)	858
PsuI	RGATCY	2 cut(s)	324, 550
PvuII	CAGCTG	1 cut(s)	180
RruI	TCGCGA	1 cut(s)	1355
RsaI	GTAC	2 cut(s)	437, 648
RsaNI	GTAC	2 cut(s)	436, 647
RseI	CAYNNNNRTG	2 cut(s)	257, 614
Rsr2I	CGGWCCG	1 cut(s)	686
RsrII	CGGWCCG	1 cut(s)	686
SacI	GAGCTC	2 cut(s)	944, 996
SacII	CCGCGG	1 cut(s)	417
SapI	GCTCTTC	1 cut(s)	812
SaqAI	TTAA	2 cut(s)	524, 1613
SatI	GCNGC	5 cut(s)	178, 181, 572, 1229, 1384
Sau3AI	GATC	6 cut(s)	151, 324, 550, 843, 1289, 1593
Sau96I	GGNCC	4 cut(s)	239, 686, 913, 1007
SchI	GAGTC	1 cut(s)	1116
ScrFI	CCNGG	6 cut(s)	334, 859, 1098, 1237, 1497, 1586
SduI	GDGCHC	4 cut(s)	254, 773, 944, 996
SexAI	ACCWGGT	1 cut(s)	857
SfaNI	GCATC	5 cut(s)	221, 606, 1041, 1483, 1638
SfcI	CTRYAG	1 cut(s)	9
SfoI	GGCGCC	1 cut(s)	1362
Sfr274I	CTCGAG	1 cut(s)	934
Sfr303I	CCGCGG	1 cut(s)	417
SgrBI	CCGCGG	1 cut(s)	417
SinI	GGWCC	4 cut(s)	239, 686, 913, 1007
SlaI	CTCGAG	1 cut(s)	934
SmiMI	CAYNNNNRTG	2 cut(s)	257, 614
SmlI	CTYRAG	1 cut(s)	934
SmoI	CTYRAG	1 cut(s)	934
Sse9I	AATT	3 cut(s)	228, 663, 1446
SsiI	CCGC	5 cut(s)	134, 414, 416, 546, 911
SspDI	GGCGCC	1 cut(s)	1360
SspI	AATATT	1 cut(s)	1248
SspMI	CTAG	6 cut(s)	236, 294, 308, 734, 1256, 1293
SstI	GAGCTC	2 cut(s)	944, 996
StyD4I	CCNGG	6 cut(s)	332, 857, 1096, 1235, 1495, 1584
TaaI	ACNGT	4 cut(s)	68, 537, 894, 1555
TaiI	ACGT	2 cut(s)	627, 1578
TaqI	TCGA	9 cut(s)	147, 248, 279, 935, 969, 996, 1049, 1288, 1316
TasI	AATT	3 cut(s)	228, 663, 1446
TfiI	GAWTC	4 cut(s)	88, 559, 730, 793
Tru1I	TTAA	2 cut(s)	524, 1613
Tru9I	TTAA	2 cut(s)	524, 1613
TscAI	CASTG	6 cut(s)	13, 540, 642, 784, 1399, 1485
TseFI	GTSAC	3 cut(s)	62, 122, 289
TseI	GCWGC	5 cut(s)	177, 180, 571, 1228, 1383
Tsp45I	GTSAC	3 cut(s)	62, 122, 289
TspDTI	ATGAA	3 cut(s)	17, 455, 659
TspGWI	ACGGA	1 cut(s)	1296
TspRI	CASTG	6 cut(s)	13, 540, 642, 784, 1399, 1485
VpaK11BI	GGWCC	4 cut(s)	239, 686, 913, 1007
XapI	RAATTY	1 cut(s)	663
XceI	RCATGY	3 cut(s)	307, 613, 1472
XhoI	CTCGAG	1 cut(s)	934
XspI	CTAG	6 cut(s)	236, 294, 308, 734, 1256, 1293
Zsp2I	ATGCAT	1 cut(s)	1470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.