Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003352

Physical Location & Seq

Genomic Coordinates Reverse (-)

871934 .. 874904

Gene Structure 2971 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G001010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGAGGATCACAATCCGATCTCCGATGACCCGAAAACCCCACTTCTCCCAGTTCACGACCAAATCCACCGATCACAGAGCTTTCATTCAGCTCTGAAATCCATCCTCACACCCAAGAACTTCTACGTAGTCTTAGGACCTCTTCTGTGCGCAATCATATGCGTTTTTGTGAAGATAGAGGGGCCGGTGAGTAGCCGGAACATGCTGGCAGTGCTGGCTTGGGTTTTCGCTTGGTGGCTGACGGAGGCCGTGCCGATGCCTATAACCTCCATGGCTCCTCTCTTCCTCTTCCCACTTTTCGGAATCGCTTCGGCTGATGATGTTGCTCACTCTTACATGGACGATATCATAGCTCTTGTTCTCGGCAGCTTCATTTTGGCCCTAGCGGTTGAGCATTACAACGTTCACAGAAGACTGGCCTTGAATATTACAATACTCTTCTGCGGGGATCCACTGAATCCTCCCCTGCTCCTCCTTGGGATTTGCGCCACGACAGCGTTTGTGAGCATGTGGATGCACAACGTGTCAGCTGTGGTGATGATGATGCCGATGGCGACCGGAATCCTGCAACGTTTTCCGGTGGGTCTCGATCAGTCCGTTGTGTCGAGCAACTTCTGCAGAGCTGTGGTTCTGGGGGTGACGTACTCTACAGCCATTGGAGGGATGAGTACTCTTACGGGGACAGGCGTCAATCTGATATTGGTTGGAATGTGGAAGAGCTATTTTCCGGAAGAGGAGCCGATCAGCTTCAGTACTTGGTTTCTTTTTGGGTTTCCTATGGCTTTGTTGATTTTCTTGGCCTTGTGGATCATACTTTGCTGCTTGTATTGCTCCAAAAGTTCAGGCCCTGCTCTCTCTGCTTATTTGGATAAAGCCCATTTGAAGAGGGAGCTCGAAATGTTAGGTCCAATGGCTTTTGCTGAGAAGATGATATTGGCTGTGTTTTCGATGTTGATAGTTTTGTGGATGACAAGAAGCATTACAGACGAGATTCCCGGCTGGGGAGCCCTCTTCAACGGGCGTGCCGGTGATGGAACTGCCAGTGTTATGATGGCAACATTGCTGTTCATTATTCCTAACAAGAAGCAAAAAGGTGAGAAGTTGATGGACTGGAACAAATGCAAGAAGCTACCATGGAACATTGTGTTGTTACTAGGTGCTGGTTTCGCCATAGCTGATGGGGTTCGAACTAGTGGCCTCGCAGAGATACTATCCGAAGCCTTAGATTTCTTGGAACAAGTCCCCTACTTGGCAATTGCACCAGCTGTGTGTCTCATTAGTAGTACCATCACTGAGTTAATTACGTCAAACAATGCCACTACCACACTTGTTATCCCTCTCCTAATTCAAATAGCGAAAAGTATGAATGTGCATCCGCTGCTTCTTATGATTCCAGGAGCTGTCGGGGCCCAATTTGCTTTCTTGCTTCCGACTGGAACCCCTTCGAATACAGTTGGGTTCATCACTGGCCACATTGAAATCAAAGATATGATCAAGGTTGGCTTGCCATTAAAGATTGCCGGAACTGCGGTGCTGACACTTTTGATGCCTACACTTGGAACTTATGTATTTGGGACAAATGAACCAGTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006873 GO:0006885 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071423 GO:0071702 GO:0098656 GO:0098771 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

531

Amino Acids

57.72

Weight (kDa)

6.12

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	63 - 518	1e-55	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	76 - 463	4.8e-43	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47560
fragaria_vesca	FvH4_3g00890 FvH4_3g00891 FvH4_3g00891
malus_domestica	MD05G1358600.v1.1 MD10G1332900.v1.1 MD10G1333000.v1.1
prunus_persica	Prupe.4G009400_v2.0.a1 Prupe.4G009500_v2.0.a1 Prupe.4G009500_v2.0.a1
pyrus_communis	pycom05g32430 pycom10g28220 pycom10g28230 pycom10g28300 pycom10g28330
rosa_chinensis	RchiOBHm_Chr5g0001361 RchiOBHm_Chr5g0001371
rosa_laevigata	RLG00000030922 RLG00000030923
rosa_multiflora	Rmu_co8451069.1_g000001 Rmu_sc0001706.1_g000004 Rmu_sc0003749.1_g000019 Rmu_sc0003900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00074990
rosa_rugosa	Rorug04G0390100.1 Rorug04G0390200
rosa_samantha	Rh5AG010400 Rh5AG010500 Rh5BG013100 Rh5BG013300 Rh5CG011400 Rh5CG011500 Rh5DG010800 Rh5DG010900
rosa_wichuraiana	Rw5G001000 Rw5G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	151
AccIII	TCCGGA	1 cut(s)	727
AciI	CCGC	4 cut(s)	386, 444, 1376, 1529
AclI	AACGTT	2 cut(s)	402, 571
AclWI	GGATC	4 cut(s)	15, 443, 456, 815
AcoI	YGGCCR	1 cut(s)	1468
AcuI	CTGAAG	1 cut(s)	733
AcyI	GRCGYC	1 cut(s)	687
AdeI	CACNNNGTG	1 cut(s)	523
AfaI	GTAC	4 cut(s)	644, 670, 754, 1285
AfiI	CCNNNNNNNGG	5 cut(s)	299, 660, 1001, 1249, 1556
AflIII	ACRYGT	1 cut(s)	522
AgsI	TTSAA	6 cut(s)	424, 883, 1015, 1349, 1478, 1592
AhlI	ACTAGT	1 cut(s)	1190
AjnI	CCWGG	1 cut(s)	1393
AjuI	GAANNNNNNNTTGG	2 cut(s)	917, 949
Alw21I	GWGCWC	1 cut(s)	894
Alw26I	GTCTC	2 cut(s)	590, 1277
AlwI	GGATC	4 cut(s)	15, 443, 456, 815
AlwNI	CAGNNNCTG	2 cut(s)	848, 1400
Aor13HI	TCCGGA	1 cut(s)	727
AoxI	GGCC	9 cut(s)	182, 246, 378, 417, 798, 844, 1195, 1407, 1468
ApaI	GGGCCC	1 cut(s)	1411
ApeKI	GCWGC	3 cut(s)	366, 819, 1378
Asp700I	GAANNNNTTC	3 cut(s)	307, 1441, 1587
AspLEI	GCGC	2 cut(s)	152, 488
AspS9I	GGNCC	7 cut(s)	137, 182, 379, 845, 905, 1407, 1408
AsuC2I	CCSGG	1 cut(s)	996
AsuHPI	GGTGA	5 cut(s)	199, 547, 649, 1040, 1106
AsuII	TTCGAA	2 cut(s)	1186, 1445
AvaII	GGWCC	2 cut(s)	137, 905
BaeGI	GKGCMC	1 cut(s)	1411
BalI	TGGCCA	1 cut(s)	1470
BamHI	GGATCC	1 cut(s)	448
BanII	GRGCYC	3 cut(s)	894, 1009, 1411
BbsI	GAAGAC	1 cut(s)	418
Bbv12I	GWGCWC	1 cut(s)	894
BbvI	GCAGC	3 cut(s)	378, 806, 1365
BccI	CCATC	7 cut(s)	110, 544, 1025, 1045, 1099, 1172, 1295
BceAI	ACGGC	1 cut(s)	233
BciT130I	CCWGG	1 cut(s)	1395
BclI	TGATCA	1 cut(s)	1491
BcnI	CCSGG	1 cut(s)	996
BcoDI	GTCTC	2 cut(s)	590, 1277
BcuI	ACTAGT	1 cut(s)	1190
BfaI	CTAG	3 cut(s)	383, 1154, 1191
BfmI	CTRYAG	2 cut(s)	616, 648
BisI	GCNGC	3 cut(s)	367, 820, 1379
BlsI	GCNGC	3 cut(s)	368, 821, 1380
BmcAI	AGTACT	2 cut(s)	670, 754
Bme1390I	CCNGG	2 cut(s)	996, 1395
Bme18I	GGWCC	2 cut(s)	137, 905
BmgT120I	GGNCC	7 cut(s)	137, 182, 379, 845, 905, 1407, 1408
BmiI	GGNNCC	8 cut(s)	183, 276, 450, 738, 1006, 1408, 1409, 1438
BmrFI	CCNGG	2 cut(s)	996, 1395
BmrI	ACTGGG	1 cut(s)	44
BmsI	GCATC	5 cut(s)	246, 504, 534, 1381, 1536
BmuI	ACTGGG	1 cut(s)	44
BoxI	GACNNNNGTC	1 cut(s)	686
BpiI	GAAGAC	1 cut(s)	418
Bpu14I	TTCGAA	2 cut(s)	1186, 1445
BpuMI	CCSGG	1 cut(s)	996
BsaAI	YACGTR	1 cut(s)	127
BsaBI	GATNNNNATC	1 cut(s)	12
BsaHI	GRCGYC	1 cut(s)	687
BsaI	GGTCTC	1 cut(s)	590
BsaJI	CCNNGG	3 cut(s)	270, 475, 1133
BsaWI	WCCGGW	3 cut(s)	557, 577, 727
Bsc4I	CCNNNNNNNGG	5 cut(s)	299, 660, 1001, 1249, 1556
Bse118I	RCCGGY	2 cut(s)	184, 1025
Bse1I	ACTGG	7 cut(s)	50, 420, 1041, 1115, 1438, 1471, 1586
Bse3DI	GCAATG	1 cut(s)	1058
Bse8I	GATNNNNATC	1 cut(s)	12
BseAI	TCCGGA	1 cut(s)	727
BseBI	CCWGG	1 cut(s)	1395
BseDI	CCNNGG	3 cut(s)	270, 475, 1133
BseGI	GGATG	5 cut(s)	102, 519, 669, 972, 1372
BseJI	GATNNNNATC	1 cut(s)	12
BseLI	CCNNNNNNNGG	5 cut(s)	299, 660, 1001, 1249, 1556
BseMI	GCAATG	1 cut(s)	1058
BseMII	CTCAG	2 cut(s)	912, 1284
BseNI	ACTGG	7 cut(s)	50, 420, 1041, 1115, 1438, 1471, 1586
BseRI	GAGGAG	3 cut(s)	267, 461, 749
BseSI	GKGCMC	1 cut(s)	1411
BseXI	GCAGC	3 cut(s)	378, 806, 1365
BseYI	CCCAGC	1 cut(s)	999
Bsh1285I	CGRYCG	1 cut(s)	558
BshFI	GGCC	9 cut(s)	184, 248, 380, 419, 800, 846, 1197, 1409, 1470
BsiEI	CGRYCG	1 cut(s)	558
BsiHKAI	GWGCWC	1 cut(s)	894
BsiSI	CCGG	8 cut(s)	185, 196, 558, 578, 728, 996, 1026, 1521
BslFI	GGGAC	3 cut(s)	694, 1226, 1588
BslI	CCNNNNNNNGG	5 cut(s)	299, 660, 1001, 1249, 1556
BsmAI	GTCTC	2 cut(s)	590, 1277
BsmFI	GGGAC	3 cut(s)	694, 1226, 1588
BsnI	GGCC	9 cut(s)	184, 248, 380, 419, 800, 846, 1197, 1409, 1470
Bso31I	GGTCTC	1 cut(s)	590
Bsp119I	TTCGAA	2 cut(s)	1186, 1445
Bsp120I	GGGCCC	1 cut(s)	1407
Bsp1286I	GDGCHC	3 cut(s)	894, 1009, 1411
Bsp13I	TCCGGA	1 cut(s)	727
Bsp143I	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
Bsp19I	CCATGG	2 cut(s)	270, 1133
BspACI	CCGC	4 cut(s)	386, 444, 1376, 1529
BspANI	GGCC	9 cut(s)	184, 248, 380, 419, 800, 846, 1197, 1409, 1470
BspCNI	CTCAG	2 cut(s)	913, 1285
BspEI	TCCGGA	1 cut(s)	727
BspLI	GGNNCC	8 cut(s)	183, 276, 450, 738, 1006, 1408, 1409, 1438
BspMAI	CTGCAG	1 cut(s)	620
BspPI	GGATC	4 cut(s)	15, 443, 456, 815
BspQI	GCTCTTC	1 cut(s)	710
BspT104I	TTCGAA	2 cut(s)	1186, 1445
BspTNI	GGTCTC	1 cut(s)	590
BsrDI	GCAATG	1 cut(s)	1058
BsrFI	RCCGGY	2 cut(s)	184, 1025
BsrI	ACTGG	7 cut(s)	50, 420, 1041, 1115, 1438, 1471, 1586
BssAI	RCCGGY	2 cut(s)	184, 1025
BssECI	CCNNGG	3 cut(s)	270, 475, 1133
BssMI	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
BssNI	GRCGYC	1 cut(s)	687
BssT1I	CCWWGG	3 cut(s)	270, 475, 1133
Bst2UI	CCWGG	1 cut(s)	1395
Bst4CI	ACNGT	1 cut(s)	1453
Bst6I	CTCTTC	8 cut(s)	147, 287, 293, 443, 710, 726, 878, 1016
BstACI	GRCGYC	1 cut(s)	687
BstAPI	GCANNNNNTGC	2 cut(s)	615, 1378
BstBAI	YACGTR	1 cut(s)	127
BstBI	TTCGAA	2 cut(s)	1186, 1445
BstC8I	GCNNGC	4 cut(s)	207, 216, 1023, 1505
BstDEI	CTNAG	4 cut(s)	133, 921, 1222, 1293
BstDSI	CCRYGG	2 cut(s)	270, 1133
BstF5I	GGATG	5 cut(s)	102, 519, 669, 972, 1372
BstHHI	GCGC	2 cut(s)	152, 488
BstKTI	GATC	8 cut(s)	10, 21, 74, 451, 592, 744, 810, 1494
BstMAI	GTCTC	2 cut(s)	590, 1277
BstMBI	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
BstMCI	CGRYCG	1 cut(s)	558
BstNI	CCWGG	1 cut(s)	1395
BstNSI	RCATGY	2 cut(s)	205, 511
BstPAI	GACNNNNGTC	1 cut(s)	686
BstSCI	CCNGG	2 cut(s)	994, 1393
BstSFI	CTRYAG	2 cut(s)	616, 648
BstSLI	GKGCMC	1 cut(s)	1411
BstSNI	TACGTA	1 cut(s)	127
BstV1I	GCAGC	3 cut(s)	378, 806, 1365
BstV2I	GAAGAC	1 cut(s)	418
BstX2I	RGATCY	1 cut(s)	448
BstYI	RGATCY	1 cut(s)	448
BsuRI	GGCC	9 cut(s)	184, 248, 380, 419, 800, 846, 1197, 1409, 1470
BtgI	CCRYGG	2 cut(s)	270, 1133
BtsCI	GGATG	5 cut(s)	102, 519, 669, 972, 1372
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	5 cut(s)	216, 452, 1048, 1290, 1464
Cac8I	GCNNGC	4 cut(s)	207, 216, 1023, 1505
CaiI	CAGNNNCTG	2 cut(s)	848, 1400
CfoI	GCGC	2 cut(s)	152, 488
Cfr10I	RCCGGY	2 cut(s)	184, 1025
Cfr13I	GGNCC	7 cut(s)	137, 182, 379, 845, 905, 1407, 1408
CseI	GACGC	1 cut(s)	676
Csp6I	GTAC	4 cut(s)	643, 669, 753, 1284
CviAII	CATG	5 cut(s)	202, 271, 337, 508, 1134
CviQI	GTAC	4 cut(s)	643, 669, 753, 1284
DdeI	CTNAG	4 cut(s)	133, 921, 1222, 1293
DpnI	GATC	8 cut(s)	9, 20, 73, 450, 591, 743, 809, 1493
DpnII	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
DraIII	CACNNNGTG	1 cut(s)	523
EaeI	YGGCCR	1 cut(s)	1468
Eam1104I	CTCTTC	8 cut(s)	147, 287, 293, 443, 710, 726, 878, 1016
EarI	CTCTTC	8 cut(s)	147, 287, 293, 443, 710, 726, 878, 1016
Ecl136II	GAGCTC	1 cut(s)	892
Eco105I	TACGTA	1 cut(s)	127
Eco130I	CCWWGG	3 cut(s)	270, 475, 1133
Eco24I	GRGCYC	3 cut(s)	894, 1009, 1411
Eco31I	GGTCTC	1 cut(s)	590
Eco32I	GATATC	1 cut(s)	346
Eco47I	GGWCC	2 cut(s)	137, 905
Eco53kI	GAGCTC	1 cut(s)	892
Eco57I	CTGAAG	1 cut(s)	733
EcoICRI	GAGCTC	1 cut(s)	892
EcoO109I	RGGNCCY	3 cut(s)	137, 845, 1407
EcoRII	CCWGG	1 cut(s)	1393
EcoRV	GATATC	1 cut(s)	346
EcoT14I	CCWWGG	3 cut(s)	270, 475, 1133
EcoT38I	GRGCYC	3 cut(s)	894, 1009, 1411
ErhI	CCWWGG	3 cut(s)	270, 475, 1133
FaeI	CATG	5 cut(s)	205, 274, 340, 511, 1137
FalI	AAGNNNNNCTT	2 cut(s)	1487, 1519
FaqI	GGGAC	3 cut(s)	694, 1226, 1588
FatI	CATG	5 cut(s)	201, 270, 336, 507, 1133
FauI	CCCGC	1 cut(s)	437
FauNDI	CATATG	1 cut(s)	158
FbaI	TGATCA	1 cut(s)	1491
Fnu4HI	GCNGC	3 cut(s)	367, 820, 1379
FokI	GGATG	5 cut(s)	89, 526, 676, 979, 1359
FriOI	GRGCYC	3 cut(s)	894, 1009, 1411
Fsp4HI	GCNGC	3 cut(s)	367, 820, 1379
FspBI	CTAG	3 cut(s)	383, 1154, 1191
FspI	TGCGCA	1 cut(s)	151
GlaI	GCGC	2 cut(s)	151, 487
GluI	GCNGC	3 cut(s)	367, 820, 1379
GsaI	CCCAGC	1 cut(s)	1003
HaeIII	GGCC	9 cut(s)	184, 248, 380, 419, 800, 846, 1197, 1409, 1470
HapII	CCGG	8 cut(s)	185, 196, 558, 578, 728, 996, 1026, 1521
HgaI	GACGC	1 cut(s)	676
HhaI	GCGC	2 cut(s)	152, 488
Hin1I	GRCGYC	1 cut(s)	687
Hin1II	CATG	5 cut(s)	205, 274, 340, 511, 1137
Hin6I	GCGC	2 cut(s)	150, 486
HinP1I	GCGC	2 cut(s)	150, 486
HinfI	GANTC	5 cut(s)	303, 457, 561, 991, 1390
HpaII	CCGG	8 cut(s)	185, 196, 558, 578, 728, 996, 1026, 1521
HphI	GGTGA	5 cut(s)	199, 547, 649, 1040, 1106
Hpy166II	GTNNAC	2 cut(s)	55, 406
Hpy188I	TCNGA	7 cut(s)	18, 25, 96, 302, 696, 1216, 1431
Hpy188III	TCNNGA	3 cut(s)	56, 587, 728
Hpy8I	GTNNAC	2 cut(s)	55, 406
HpyAV	CCTTC	1 cut(s)	1452
HpyCH4III	ACNGT	1 cut(s)	1453
HpyCH4IV	ACGT	6 cut(s)	126, 402, 522, 571, 641, 1304
HpyCH4V	TGCA	6 cut(s)	517, 568, 618, 1122, 1259, 1372
HpyF3I	CTNAG	4 cut(s)	133, 921, 1222, 1293
HpySE526I	ACGT	6 cut(s)	126, 402, 522, 571, 641, 1304
Hsp92I	GRCGYC	1 cut(s)	687
Hsp92II	CATG	5 cut(s)	205, 274, 340, 511, 1137
HspAI	GCGC	2 cut(s)	150, 486
Kpn2I	TCCGGA	1 cut(s)	727
Ksp22I	TGATCA	1 cut(s)	1491
Kzo9I	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
LguI	GCTCTTC	1 cut(s)	710
LmnI	GCTCC	7 cut(s)	280, 474, 736, 836, 889, 1004, 1397
Lsp1109I	GCAGC	3 cut(s)	378, 806, 1365
LweI	GCATC	5 cut(s)	246, 504, 534, 1381, 1536
MaeI	CTAG	3 cut(s)	383, 1154, 1191
MaeII	ACGT	6 cut(s)	126, 402, 522, 571, 641, 1304
MaeIII	GTNAC	2 cut(s)	637, 1149
MalI	GATC	8 cut(s)	9, 20, 73, 450, 591, 743, 809, 1493
MboI	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	1 cut(s)	448
MhlI	GDGCHC	3 cut(s)	894, 1009, 1411
MlsI	TGGCCA	1 cut(s)	1470
MluCI	AATT	4 cut(s)	1254, 1299, 1344, 1412
MluNI	TGGCCA	1 cut(s)	1470
MmeI	TCCRAC	2 cut(s)	685, 1454
Mox20I	TGGCCA	1 cut(s)	1470
MroI	TCCGGA	1 cut(s)	727
MroXI	GAANNNNTTC	3 cut(s)	307, 1441, 1587
MscI	TGGCCA	1 cut(s)	1470
MseI	TTAA	2 cut(s)	1298, 1511
MslI	CAYNNNNRTG	1 cut(s)	512
Msp20I	TGGCCA	1 cut(s)	1470
MspA1I	CMGCKG	3 cut(s)	530, 1265, 1378
MspI	CCGG	8 cut(s)	185, 196, 558, 578, 728, 996, 1026, 1521
MspR9I	CCNGG	2 cut(s)	996, 1395
MunI	CAATTG	1 cut(s)	1254
MvaI	CCWGG	1 cut(s)	1395
NciI	CCSGG	1 cut(s)	996
NcoI	CCATGG	2 cut(s)	270, 1133
NdeI	CATATG	1 cut(s)	158
NdeII	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
NlaIII	CATG	5 cut(s)	205, 274, 340, 511, 1137
NlaIV	GGNNCC	8 cut(s)	183, 276, 450, 738, 1006, 1408, 1409, 1438
NmeAIII	GCCGAG	1 cut(s)	342
NmuCI	GTSAC	1 cut(s)	637
NsbI	TGCGCA	1 cut(s)	151
NspI	RCATGY	2 cut(s)	205, 511
NspV	TTCGAA	2 cut(s)	1186, 1445
PciSI	GCTCTTC	1 cut(s)	710
PcsI	WCGNNNNNNNCGW	1 cut(s)	594
PdmI	GAANNNNTTC	3 cut(s)	307, 1441, 1587
PfeI	GAWTC	5 cut(s)	303, 457, 561, 991, 1390
PfoI	TCCNGGA	1 cut(s)	1393
PkrI	GCNGC	3 cut(s)	368, 821, 1380
Ppu21I	YACGTR	1 cut(s)	127
PpuMI	RGGWCCY	1 cut(s)	137
PshAI	GACNNNNGTC	1 cut(s)	686
Psp124BI	GAGCTC	1 cut(s)	894
Psp1406I	AACGTT	2 cut(s)	402, 571
Psp5II	RGGWCCY	1 cut(s)	137
Psp6I	CCWGG	1 cut(s)	1393
PspFI	CCCAGC	1 cut(s)	999
PspGI	CCWGG	1 cut(s)	1393
PspN4I	GGNNCC	8 cut(s)	183, 276, 450, 738, 1006, 1408, 1409, 1438
PspOMI	GGGCCC	1 cut(s)	1407
PspPI	GGNCC	7 cut(s)	137, 182, 379, 845, 905, 1407, 1408
PspPPI	RGGWCCY	1 cut(s)	137
PstI	CTGCAG	1 cut(s)	620
PstNI	CAGNNNCTG	2 cut(s)	848, 1400
PsuI	RGATCY	1 cut(s)	448
PvuII	CAGCTG	2 cut(s)	530, 1265
RsaI	GTAC	4 cut(s)	644, 670, 754, 1285
RsaNI	GTAC	4 cut(s)	643, 669, 753, 1284
RseI	CAYNNNNRTG	1 cut(s)	512
SacI	GAGCTC	1 cut(s)	894
SapI	GCTCTTC	1 cut(s)	710
SaqAI	TTAA	2 cut(s)	1298, 1511
SatI	GCNGC	3 cut(s)	367, 820, 1379
Sau3AI	GATC	8 cut(s)	7, 18, 71, 448, 589, 741, 807, 1491
Sau96I	GGNCC	7 cut(s)	137, 182, 379, 845, 905, 1407, 1408
ScaI	AGTACT	2 cut(s)	670, 754
ScrFI	CCNGG	2 cut(s)	996, 1395
SduI	GDGCHC	3 cut(s)	894, 1009, 1411
SfaNI	GCATC	5 cut(s)	246, 504, 534, 1381, 1536
SfcI	CTRYAG	2 cut(s)	616, 648
SfuI	TTCGAA	2 cut(s)	1186, 1445
SinI	GGWCC	2 cut(s)	137, 905
SmiMI	CAYNNNNRTG	1 cut(s)	512
SnaBI	TACGTA	1 cut(s)	127
SpeI	ACTAGT	1 cut(s)	1190
Sse9I	AATT	4 cut(s)	1254, 1299, 1344, 1412
SsiI	CCGC	4 cut(s)	386, 444, 1376, 1529
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	3 cut(s)	383, 1154, 1191
SstI	GAGCTC	1 cut(s)	894
StyD4I	CCNGG	2 cut(s)	994, 1393
StyI	CCWWGG	3 cut(s)	270, 475, 1133
TaaI	ACNGT	1 cut(s)	1453
TaiI	ACGT	6 cut(s)	129, 405, 525, 574, 644, 1307
TaqI	TCGA	6 cut(s)	588, 605, 894, 947, 1186, 1445
TasI	AATT	4 cut(s)	1254, 1299, 1344, 1412
TatI	WGTACW	2 cut(s)	668, 752
TfiI	GAWTC	5 cut(s)	303, 457, 561, 991, 1390
Tru1I	TTAA	2 cut(s)	1298, 1511
Tru9I	TTAA	2 cut(s)	1298, 1511
TscAI	CASTG	5 cut(s)	216, 459, 1048, 1297, 1471
TseFI	GTSAC	1 cut(s)	637
TseI	GCWGC	3 cut(s)	366, 819, 1378
Tsp45I	GTSAC	1 cut(s)	637
TspDTI	ATGAA	6 cut(s)	74, 361, 1057, 1379, 1450, 1596
TspGWI	ACGGA	2 cut(s)	257, 586
TspRI	CASTG	5 cut(s)	216, 459, 1048, 1297, 1471
VpaK11BI	GGWCC	2 cut(s)	137, 905
XceI	RCATGY	2 cut(s)	205, 511
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1048
XmnI	GAANNNNTTC	3 cut(s)	307, 1441, 1587
XspI	CTAG	3 cut(s)	383, 1154, 1191
ZrmI	AGTACT	2 cut(s)	670, 754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.