Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0003352

Physical Location & Seq

Genomic Coordinates Reverse (-)

869303 .. 871639

Gene Structure 2337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G001000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGACAGTCCCACCACCCCTGAGAAAACCCCACTTCTCCCAGTTGAGGATAATTCAATCCAAAAATCAAAGAGCAGCTGCTTCTGTTCGTCATTGAAATCAGTTCTAACATCCAACAACCTCTCCATTCTCCTAGGACCTATTTTGAGCACCATTGTGTACCTTTGTGTCAAGTTCGATGGCAATGTGACTAGCCGGAACATGCTCGCTGTGCTTTCTTGGATCTTTGCCTGGTGGCTCACAGAGGCTCTGCCTATGCCAATAACATCAATGTCTCCACTCTTTCTCTTCCCATTTTTCGGCATTGCCTCCGCGGATGATGTTGCACACTTGTACATGAACGATGTCATTGCCCTTGTTCTTGGAAGCTTTATTTTGGCTCTTGCTGTTGAGCATTATAACATCCATAAAAGATTGGCCTTAAATATTACACTGTTATTCTGCGGAGATCCTCTGAATCCGCCATTGCTGCTTCTGGGAATATGTGCGACCACAGCTTTCGTTAGCATGTGGATGCACAACGTGGCAACGGCGGTGTTGATGGTGCCGGTAGCCACCGGAATCCTTCACCGCTTTCCGACGGGTCCCAACCAGCCGGTCGTTGTGGGAAAGTTTTGCAGAGCTGTGATTCTAGGGGTGATATACTCAACAAGCATAGGAGGGATGAGCACTCTCACTGGGACAGGTGTGAATCTCATATTGATCGGAATGTGGAACAGCTATTTTCCAGAAGCAAAGCCGATCACATTCAGCACCTGGTTCCTTTTCGGGTTCCCTTCGGCTTTGTTGATGTTCTTCGCAATGTGGGCGATCCTTTGCTTCTTGTATTGCTCGAGAAGCTCGGGCCAGGCTCTCTCTTCTTATTTCGACAAGGACTATTTGAAGAAAGAGCTCGAGATGTTGGGTCCAATGGCTTTTGCTGAGAAGATGGTTTTGGCTTTGTTTTTGATGCTGATTTGCTTGTGGATGACAAGAAGCATAACAGATGATATTCCTGGCTGGGGAGTCCTCTTCAAGGGGCGTGCCGGCGATGGAACTGCCAGTGTTATGGTGGCAACTTTGTTGTTTATTGTTCCAAGCAGAAAGCAAAAGGGTGAGAAGTTGATGGACTGGAACAAATGCAAGCAGCTACCCTGGAACATCATATTGTTACTAGGTGCTGGTTTGGCCATAGCAGACGGAGTTCGATCAAGTGGCCTTGCAGATATATTGTCGAAAAAATTGGATTTCTTGGAGGCAGTCCCATATTTAGCCCTGGCACCTGCTGTGTGTCTCATAAGCAGTACCATCACTGAGTTGATTACATCAAACAATGCCACTACGACGCTTATTGTGCCTCTCCTAATTCAGATGGCAAAAACTATACACGTGCATCCACTGCTTCTTATGGTTCCCGGAGGCATTGGTGCGCAGTTTGCTTTCTTGCTTCCGACATCAACCCCCTCAAATACAGTTGGATTTGCTACCGGGCGCGTTGAAATCCGAGATATGATCGTGGTTGGTTTGGCATTAAAGATTGCTGGGATTGCTGTGCTTTCCATTTTGATGCCCACACTAGGAGCCTTTGTTTTTGGGACAAATGCACCAGTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006873 GO:0006885 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071423 GO:0071702 GO:0098656 GO:0098771 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

531

Amino Acids

57.43

Weight (kDa)

8.42

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	63 - 517	1.6e-53	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	76 - 463	2.6e-41	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47560
fragaria_vesca	FvH4_3g00890 FvH4_3g00891 FvH4_3g00891
malus_domestica	MD05G1358600.v1.1 MD10G1332900.v1.1 MD10G1333000.v1.1
prunus_persica	Prupe.4G009400_v2.0.a1 Prupe.4G009500_v2.0.a1 Prupe.4G009500_v2.0.a1
pyrus_communis	pycom05g32430 pycom10g28220 pycom10g28230 pycom10g28300 pycom10g28330
rosa_chinensis	RchiOBHm_Chr5g0001361 RchiOBHm_Chr5g0001371
rosa_laevigata	RLG00000030922 RLG00000030923
rosa_multiflora	Rmu_co8451069.1_g000001 Rmu_sc0001706.1_g000004 Rmu_sc0003749.1_g000019 Rmu_sc0003900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00074990
rosa_rugosa	Rorug04G0390100.1 Rorug04G0390200
rosa_samantha	Rh5AG010400 Rh5AG010500 Rh5BG013100 Rh5BG013300 Rh5CG011400 Rh5CG011500 Rh5DG010800 Rh5DG010900
rosa_wichuraiana	Rw5G001000 Rw5G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	399
AarI	CACCTGC	1 cut(s)	1270
Acc16I	TGCGCA	1 cut(s)	1410
Acc36I	ACCTGC	1 cut(s)	1270
AccB1I	GGYRCC	2 cut(s)	544, 1258
AccII	CGCG	2 cut(s)	314, 1473
AciI	CCGC	6 cut(s)	312, 314, 444, 461, 533, 571
AclWI	GGATC	3 cut(s)	230, 443, 805
AcoI	YGGCCR	1 cut(s)	1167
AcvI	CACGTG	1 cut(s)	1369
AdeI	CACNNNGTG	1 cut(s)	523
AfaI	GTAC	3 cut(s)	161, 335, 1285
AfiI	CCNNNNNNNGG	5 cut(s)	46, 299, 1001, 1015, 1556
AflIII	ACRYGT	1 cut(s)	1366
AgsI	TTSAA	5 cut(s)	57, 97, 883, 1015, 1478
AjnI	CCWGG	6 cut(s)	230, 755, 846, 994, 1133, 1254
AjuI	GAANNNNNNNTTGG	2 cut(s)	917, 949
AleI	CACNNNNGTG	1 cut(s)	155
AluBI	AGCT	8 cut(s)	78, 369, 497, 623, 720, 840, 892, 1129
AluI	AGCT	8 cut(s)	78, 369, 497, 623, 720, 840, 892, 1129
Alw21I	GWGCWC	3 cut(s)	152, 671, 894
Alw26I	GTCTC	2 cut(s)	279, 1277
AlwI	GGATC	3 cut(s)	230, 443, 805
AlwNI	CAGNNNCTG	1 cut(s)	756
Ama87I	CYCGRG	3 cut(s)	832, 841, 893
AoxI	GGCC	4 cut(s)	417, 844, 1167, 1195
ApeKI	GCWGC	4 cut(s)	75, 78, 469, 1126
AspA2I	CCTAGG	1 cut(s)	133
AspLEI	GCGC	2 cut(s)	1411, 1473
AspS9I	GGNCC	4 cut(s)	137, 584, 844, 905
AsuC2I	CCSGG	2 cut(s)	1395, 1468
AsuHPI	GGTGA	3 cut(s)	560, 649, 1106
AvaI	CYCGRG	3 cut(s)	832, 841, 893
AvaII	GGWCC	3 cut(s)	137, 584, 905
AvrII	CCTAGG	1 cut(s)	133
BalI	TGGCCA	1 cut(s)	1169
BanI	GGYRCC	2 cut(s)	544, 1258
BanII	GRGCYC	1 cut(s)	894
BbrPI	CACGTG	1 cut(s)	1369
Bbv12I	GWGCWC	3 cut(s)	152, 671, 894
BbvI	GCAGC	4 cut(s)	65, 87, 456, 1138
BccI	CCATC	7 cut(s)	173, 535, 922, 1025, 1099, 1295, 1345
BceAI	ACGGC	1 cut(s)	546
BcgI	CGANNNNNNTGC	4 cut(s)	332, 366, 1019, 1053
BciT130I	CCWGG	6 cut(s)	232, 757, 848, 996, 1135, 1256
BcnI	CCSGG	2 cut(s)	1395, 1468
BcoDI	GTCTC	2 cut(s)	279, 1277
BfaI	CTAG	5 cut(s)	134, 192, 632, 1154, 1556
BfuAI	ACCTGC	1 cut(s)	1270
BisI	GCNGC	4 cut(s)	76, 79, 470, 1127
BlnI	CCTAGG	1 cut(s)	133
BlsI	GCNGC	4 cut(s)	77, 80, 471, 1128
Bme1390I	CCNGG	8 cut(s)	232, 757, 848, 996, 1135, 1256, 1395, 1468
Bme18I	GGWCC	3 cut(s)	137, 584, 905
BmeT110I	CYCGRG	3 cut(s)	832, 841, 893
BmgT120I	GGNCC	4 cut(s)	137, 584, 844, 905
BmiI	GGNNCC	9 cut(s)	546, 585, 586, 761, 773, 906, 1260, 1392, 1561
BmrFI	CCNGG	8 cut(s)	232, 757, 848, 996, 1135, 1256, 1395, 1468
BmrI	ACTGGG	2 cut(s)	35, 687
BmsI	GCATC	4 cut(s)	504, 939, 1381, 1536
BmuI	ACTGGG	2 cut(s)	35, 687
BpuMI	CCSGG	2 cut(s)	1395, 1468
BsaAI	YACGTR	1 cut(s)	1369
BsaJI	CCNNGG	4 cut(s)	133, 312, 1133, 1254
BsaWI	WCCGGW	1 cut(s)	557
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 1551, 1581
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 299, 1001, 1015, 1556
Bse118I	RCCGGY	3 cut(s)	547, 595, 1025
Bse1I	ACTGG	5 cut(s)	41, 682, 1041, 1115, 1586
Bse3DI	GCAATG	5 cut(s)	190, 303, 348, 464, 807
BseBI	CCWGG	6 cut(s)	232, 757, 848, 996, 1135, 1256
BseDI	CCNNGG	4 cut(s)	133, 312, 1133, 1254
BseGI	GGATG	7 cut(s)	110, 322, 402, 519, 669, 972, 1372
BseLI	CCNNNNNNNGG	5 cut(s)	46, 299, 1001, 1015, 1556
BseMI	GCAATG	5 cut(s)	190, 303, 348, 464, 807
BseMII	CTCAG	3 cut(s)	12, 912, 1284
BseNI	ACTGG	5 cut(s)	41, 682, 1041, 1115, 1586
BseXI	GCAGC	4 cut(s)	65, 87, 456, 1138
BseYI	CCCAGC	2 cut(s)	999, 1520
Bsh1236I	CGCG	2 cut(s)	314, 1473
Bsh1285I	CGRYCG	1 cut(s)	600
BshFI	GGCC	4 cut(s)	419, 846, 1169, 1197
BshNI	GGYRCC	2 cut(s)	544, 1258
BsiEI	CGRYCG	1 cut(s)	600
BsiHKAI	GWGCWC	3 cut(s)	152, 671, 894
BsiHKCI	CYCGRG	3 cut(s)	832, 841, 893
BsiSI	CCGG	7 cut(s)	196, 548, 558, 596, 1026, 1395, 1467
BslFI	GGGAC	4 cut(s)	570, 694, 1226, 1588
BslI	CCNNNNNNNGG	5 cut(s)	46, 299, 1001, 1015, 1556
BsmAI	GTCTC	2 cut(s)	279, 1277
BsmFI	GGGAC	4 cut(s)	570, 694, 1226, 1588
BsnI	GGCC	4 cut(s)	419, 846, 1169, 1197
BsoBI	CYCGRG	3 cut(s)	832, 841, 893
Bsp1286I	GDGCHC	3 cut(s)	152, 671, 894
Bsp1407I	TGTACA	1 cut(s)	333
Bsp143I	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
BspACI	CCGC	6 cut(s)	312, 314, 444, 461, 533, 571
BspANI	GGCC	4 cut(s)	419, 846, 1169, 1197
BspCNI	CTCAG	3 cut(s)	13, 913, 1285
BspFNI	CGCG	2 cut(s)	314, 1473
BspLI	GGNNCC	9 cut(s)	546, 585, 586, 761, 773, 906, 1260, 1392, 1561
BspMI	ACCTGC	1 cut(s)	1270
BspPI	GGATC	3 cut(s)	230, 443, 805
BspT107I	GGYRCC	2 cut(s)	544, 1258
BsrDI	GCAATG	5 cut(s)	190, 303, 348, 464, 807
BsrFI	RCCGGY	3 cut(s)	547, 595, 1025
BsrGI	TGTACA	1 cut(s)	333
BsrI	ACTGG	5 cut(s)	41, 682, 1041, 1115, 1586
BssAI	RCCGGY	3 cut(s)	547, 595, 1025
BssECI	CCNNGG	4 cut(s)	133, 312, 1133, 1254
BssMI	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
BssT1I	CCWWGG	1 cut(s)	133
Bst2UI	CCWGG	6 cut(s)	232, 757, 848, 996, 1135, 1256
Bst4CI	ACNGT	3 cut(s)	8, 435, 1453
Bst6I	CTCTTC	3 cut(s)	293, 862, 1016
BstAPI	GCANNNNNTGC	1 cut(s)	1378
BstAUI	TGTACA	1 cut(s)	333
BstBAI	YACGTR	1 cut(s)	1369
BstC8I	GCNNGC	4 cut(s)	207, 1023, 1027, 1124
BstDEI	CTNAG	3 cut(s)	21, 921, 1293
BstDSI	CCRYGG	1 cut(s)	312
BstENI	CCTNNNNNAGG	1 cut(s)	1013
BstF5I	GGATG	7 cut(s)	110, 322, 402, 519, 669, 972, 1372
BstFNI	CGCG	2 cut(s)	314, 1473
BstHHI	GCGC	2 cut(s)	1411, 1473
BstKTI	GATC	7 cut(s)	225, 451, 705, 744, 813, 1190, 1494
BstMAI	GTCTC	2 cut(s)	279, 1277
BstMBI	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
BstMCI	CGRYCG	1 cut(s)	600
BstNI	CCWGG	6 cut(s)	232, 757, 848, 996, 1135, 1256
BstNSI	RCATGY	2 cut(s)	205, 511
BstSCI	CCNGG	8 cut(s)	230, 755, 846, 994, 1133, 1254, 1393, 1466
BstUI	CGCG	2 cut(s)	314, 1473
BstV1I	GCAGC	4 cut(s)	65, 87, 456, 1138
BstX2I	RGATCY	2 cut(s)	222, 448
BstXI	CCANNNNNNTGG	1 cut(s)	1048
BstYI	RGATCY	2 cut(s)	222, 448
BsuRI	GGCC	4 cut(s)	419, 846, 1169, 1197
BtgI	CCRYGG	1 cut(s)	312
BtgZI	GCGATG	1 cut(s)	1044
BtsCI	GGATG	7 cut(s)	110, 322, 402, 519, 669, 972, 1372
BtsI	GCAGTG	1 cut(s)	1376
BtsIMutI	CAGTG	5 cut(s)	431, 675, 1048, 1290, 1376
BveI	ACCTGC	1 cut(s)	1270
Cac8I	GCNNGC	4 cut(s)	207, 1023, 1027, 1124
CaiI	CAGNNNCTG	1 cut(s)	756
CfoI	GCGC	2 cut(s)	1411, 1473
Cfr10I	RCCGGY	3 cut(s)	547, 595, 1025
Cfr13I	GGNCC	4 cut(s)	137, 584, 844, 905
Cfr42I	CCGCGG	1 cut(s)	315
CseI	GACGC	1 cut(s)	1333
CsiI	ACCWGGT	1 cut(s)	755
Csp6I	GTAC	3 cut(s)	160, 334, 1284
CviAII	CATG	3 cut(s)	202, 337, 508
CviQI	GTAC	3 cut(s)	160, 334, 1284
DdeI	CTNAG	3 cut(s)	21, 921, 1293
DpnI	GATC	7 cut(s)	224, 450, 704, 743, 812, 1189, 1493
DpnII	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
DraIII	CACNNNGTG	1 cut(s)	523
EaeI	YGGCCR	1 cut(s)	1167
Eam1104I	CTCTTC	3 cut(s)	293, 862, 1016
EarI	CTCTTC	3 cut(s)	293, 862, 1016
EciI	GGCGGA	1 cut(s)	450
Ecl136II	GAGCTC	1 cut(s)	892
Eco130I	CCWWGG	1 cut(s)	133
Eco24I	GRGCYC	1 cut(s)	894
Eco47I	GGWCC	3 cut(s)	137, 584, 905
Eco53kI	GAGCTC	1 cut(s)	892
Eco72I	CACGTG	1 cut(s)	1369
Eco88I	CYCGRG	3 cut(s)	832, 841, 893
EcoICRI	GAGCTC	1 cut(s)	892
EcoNI	CCTNNNNNAGG	1 cut(s)	1013
EcoO109I	RGGNCCY	2 cut(s)	137, 584
EcoRII	CCWGG	6 cut(s)	230, 755, 846, 994, 1133, 1254
EcoT14I	CCWWGG	1 cut(s)	133
EcoT38I	GRGCYC	1 cut(s)	894
ErhI	CCWWGG	1 cut(s)	133
FaeI	CATG	3 cut(s)	205, 340, 511
FaqI	GGGAC	4 cut(s)	570, 694, 1226, 1588
FatI	CATG	3 cut(s)	201, 336, 507
Fnu4HI	GCNGC	4 cut(s)	76, 79, 470, 1127
FokI	GGATG	7 cut(s)	97, 329, 389, 526, 676, 979, 1359
FriOI	GRGCYC	1 cut(s)	894
Fsp4HI	GCNGC	4 cut(s)	76, 79, 470, 1127
FspBI	CTAG	5 cut(s)	134, 192, 632, 1154, 1556
FspI	TGCGCA	1 cut(s)	1410
GlaI	GCGC	2 cut(s)	1410, 1472
GluI	GCNGC	4 cut(s)	76, 79, 470, 1127
GsaI	CCCAGC	2 cut(s)	1003, 1524
HaeIII	GGCC	4 cut(s)	419, 846, 1169, 1197
HapII	CCGG	7 cut(s)	196, 548, 558, 596, 1026, 1395, 1467
HgaI	GACGC	1 cut(s)	1333
HhaI	GCGC	2 cut(s)	1411, 1473
Hin1II	CATG	3 cut(s)	205, 340, 511
Hin6I	GCGC	2 cut(s)	1409, 1471
HinP1I	GCGC	2 cut(s)	1409, 1471
HindIII	AAGCTT	1 cut(s)	367
HinfI	GANTC	5 cut(s)	457, 561, 628, 691, 1005
HpaII	CCGG	7 cut(s)	196, 548, 558, 596, 1026, 1395, 1467
HphI	GGTGA	3 cut(s)	560, 649, 1106
Hpy166II	GTNNAC	1 cut(s)	160
Hpy188I	TCNGA	6 cut(s)	456, 579, 707, 1350, 1431, 1484
Hpy188III	TCNNGA	3 cut(s)	728, 834, 895
Hpy8I	GTNNAC	1 cut(s)	160
Hpy99I	CGWCG	2 cut(s)	583, 1327
HpyAV	CCTTC	2 cut(s)	575, 786
HpyCH4III	ACNGT	3 cut(s)	8, 435, 1453
HpyCH4IV	ACGT	2 cut(s)	522, 1368
HpyCH4V	TGCA	7 cut(s)	326, 517, 618, 1122, 1202, 1372, 1583
HpyF3I	CTNAG	3 cut(s)	21, 921, 1293
HpySE526I	ACGT	2 cut(s)	522, 1368
Hsp92II	CATG	3 cut(s)	205, 340, 511
HspAI	GCGC	2 cut(s)	1409, 1471
KflI	GGGWCCC	1 cut(s)	584
KroI	GCCGGC	1 cut(s)	1025
KroNI	GCCGGC	1 cut(s)	1027
KspI	CCGCGG	1 cut(s)	315
Kzo9I	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
LmnI	GCTCC	1 cut(s)	1559
Lsp1109I	GCAGC	4 cut(s)	65, 87, 456, 1138
LweI	GCATC	4 cut(s)	504, 939, 1381, 1536
MabI	ACCWGGT	1 cut(s)	755
MaeI	CTAG	5 cut(s)	134, 192, 632, 1154, 1556
MaeII	ACGT	2 cut(s)	522, 1368
MaeIII	GTNAC	2 cut(s)	187, 1149
MalI	GATC	7 cut(s)	224, 450, 704, 743, 812, 1189, 1493
MboI	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
MboII	GAAGA	6 cut(s)	280, 787, 849, 895, 937, 1003
MflI	RGATCY	2 cut(s)	222, 448
MhlI	GDGCHC	3 cut(s)	152, 671, 894
MlsI	TGGCCA	1 cut(s)	1169
MluCI	AATT	3 cut(s)	52, 1220, 1344
MluNI	TGGCCA	1 cut(s)	1169
MlyI	GAGTC	1 cut(s)	1014
MmeI	TCCRAC	5 cut(s)	138, 602, 1435, 1454, 1570
Mox20I	TGGCCA	1 cut(s)	1169
MroNI	GCCGGC	1 cut(s)	1025
MscI	TGGCCA	1 cut(s)	1169
MseI	TTAA	2 cut(s)	422, 1511
MslI	CAYNNNNRTG	3 cut(s)	155, 512, 1544
Msp20I	TGGCCA	1 cut(s)	1169
MspA1I	CMGCKG	2 cut(s)	78, 314
MspI	CCGG	7 cut(s)	196, 548, 558, 596, 1026, 1395, 1467
MspR9I	CCNGG	8 cut(s)	232, 757, 848, 996, 1135, 1256, 1395, 1468
MvaI	CCWGG	6 cut(s)	232, 757, 848, 996, 1135, 1256
MvnI	CGCG	2 cut(s)	314, 1473
NaeI	GCCGGC	1 cut(s)	1027
NciI	CCSGG	2 cut(s)	1395, 1468
NdeII	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
NgoMIV	GCCGGC	1 cut(s)	1025
NlaIII	CATG	3 cut(s)	205, 340, 511
NlaIV	GGNNCC	9 cut(s)	546, 585, 586, 761, 773, 906, 1260, 1392, 1561
NmuCI	GTSAC	1 cut(s)	187
NsbI	TGCGCA	1 cut(s)	1410
NspI	RCATGY	2 cut(s)	205, 511
OliI	CACNNNNGTG	1 cut(s)	155
PaeR7I	CTCGAG	2 cut(s)	832, 893
PaqCI	CACCTGC	1 cut(s)	1270
PdiI	GCCGGC	1 cut(s)	1027
PfeI	GAWTC	4 cut(s)	457, 561, 628, 691
PfoI	TCCNGGA	1 cut(s)	1393
PkrI	GCNGC	4 cut(s)	77, 80, 471, 1128
PleI	GAGTC	1 cut(s)	1013
PmaCI	CACGTG	1 cut(s)	1369
PmlI	CACGTG	1 cut(s)	1369
PpsI	GAGTC	1 cut(s)	1013
Ppu21I	YACGTR	1 cut(s)	1369
PpuMI	RGGWCCY	2 cut(s)	137, 584
PsiI	TTATAA	1 cut(s)	399
Psp124BI	GAGCTC	1 cut(s)	894
Psp5II	RGGWCCY	2 cut(s)	137, 584
Psp6I	CCWGG	6 cut(s)	230, 755, 846, 994, 1133, 1254
PspCI	CACGTG	1 cut(s)	1369
PspFI	CCCAGC	2 cut(s)	999, 1520
PspGI	CCWGG	6 cut(s)	230, 755, 846, 994, 1133, 1254
PspN4I	GGNNCC	9 cut(s)	546, 585, 586, 761, 773, 906, 1260, 1392, 1561
PspPI	GGNCC	4 cut(s)	137, 584, 844, 905
PspPPI	RGGWCCY	2 cut(s)	137, 584
PstNI	CAGNNNCTG	1 cut(s)	756
PsuI	RGATCY	2 cut(s)	222, 448
PvuII	CAGCTG	1 cut(s)	78
RsaI	GTAC	3 cut(s)	161, 335, 1285
RsaNI	GTAC	3 cut(s)	160, 334, 1284
RseI	CAYNNNNRTG	3 cut(s)	155, 512, 1544
SacI	GAGCTC	1 cut(s)	894
SacII	CCGCGG	1 cut(s)	315
SaqAI	TTAA	2 cut(s)	422, 1511
SatI	GCNGC	4 cut(s)	76, 79, 470, 1127
Sau3AI	GATC	7 cut(s)	222, 448, 702, 741, 810, 1187, 1491
Sau96I	GGNCC	4 cut(s)	137, 584, 844, 905
SchI	GAGTC	1 cut(s)	1014
ScrFI	CCNGG	8 cut(s)	232, 757, 848, 996, 1135, 1256, 1395, 1468
SduI	GDGCHC	3 cut(s)	152, 671, 894
SexAI	ACCWGGT	1 cut(s)	755
SfaNI	GCATC	4 cut(s)	504, 939, 1381, 1536
Sfr274I	CTCGAG	2 cut(s)	832, 893
Sfr303I	CCGCGG	1 cut(s)	315
SgrBI	CCGCGG	1 cut(s)	315
SinI	GGWCC	3 cut(s)	137, 584, 905
SlaI	CTCGAG	2 cut(s)	832, 893
SmiMI	CAYNNNNRTG	3 cut(s)	155, 512, 1544
SmlI	CTYRAG	2 cut(s)	832, 893
SmoI	CTYRAG	2 cut(s)	832, 893
Sse9I	AATT	3 cut(s)	52, 1220, 1344
SsiI	CCGC	6 cut(s)	312, 314, 444, 461, 533, 571
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	5 cut(s)	134, 192, 632, 1154, 1556
SstI	GAGCTC	1 cut(s)	894
StyD4I	CCNGG	8 cut(s)	230, 755, 846, 994, 1133, 1254, 1393, 1466
StyI	CCWWGG	1 cut(s)	133
TaaI	ACNGT	3 cut(s)	8, 435, 1453
TaiI	ACGT	2 cut(s)	525, 1371
TaqI	TCGA	6 cut(s)	177, 833, 867, 894, 1186, 1214
TasI	AATT	3 cut(s)	52, 1220, 1344
TatI	WGTACW	1 cut(s)	333
TfiI	GAWTC	4 cut(s)	457, 561, 628, 691
Tru1I	TTAA	2 cut(s)	422, 1511
Tru9I	TTAA	2 cut(s)	422, 1511
TscAI	CASTG	5 cut(s)	438, 682, 1048, 1297, 1383
TseFI	GTSAC	1 cut(s)	187
TseI	GCWGC	4 cut(s)	75, 78, 469, 1126
Tsp45I	GTSAC	1 cut(s)	187
TspDTI	ATGAA	1 cut(s)	353
TspGWI	ACGGA	1 cut(s)	1194
TspRI	CASTG	5 cut(s)	438, 682, 1048, 1297, 1383
VpaK11BI	GGWCC	3 cut(s)	137, 584, 905
XagI	CCTNNNNNAGG	1 cut(s)	1013
XceI	RCATGY	2 cut(s)	205, 511
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1048
XhoI	CTCGAG	2 cut(s)	832, 893
XmaJI	CCTAGG	1 cut(s)	133
XspI	CTAG	5 cut(s)	134, 192, 632, 1154, 1556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.