Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003352

Physical Location & Seq

Genomic Coordinates Reverse (-)

725537 .. 727728

Gene Structure 2192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG010400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGTTTAACGCAGAATGGAACACTACAAAGCAAATTAAACAATACCATTTCCTCTCATCTCGTCACAATAAAACAATCAAGAAGAATAATCACATGGACAGTCCCACCACCCCTGAGAAAACCCCACTTCTCCCAGTTGAGGATAATTCAATCCAAAAATCAAAGAGCAGCTGCTTCTGTTCGTCATTGAAATCAGTTCTAACATCCAACAACCTCTCCATTCTCCTAGGACCTATTTTGAGCACCATTGTGTGCCTTTGTGTCAAGTTCGATGGCAATGTGACTAGCCGGAACATGCTCGCTGTGCTTTCTTGGATCTTCTCCTGGTGGCTCACAGAGGCTCTGCCTATGCCAATAACATCAATGTCTCCACTCTTTCTCTTCCCATTCTTCGGCATTACCTCCGCGGATGATGTTGCACACTTGTACATGAACGATGTCATTGCCCTTGTTCTTGGAAGCTTTATTTTGGCTCTTGCTGTTGAGCATTATAACATCCATAAAAGATTGGCCTTAAATATTACACTGTTATTCTGCGGAGATCCTCTGAATCCGCCATTGCTGCTTCTGGGAATATGTGCGACCACAGCTTTCATTAGCATGTGGATGCACAACGTGGCAACGGCGGTGTTGATGGTGCCGGTAGCCACCGGAATCCTTCACCGCTTTCCGACGGGTCCCAACCAGCCGGTCGTTGTGGGAAAGTTTTGCAGAGCTGTGATTCTAGGGGTGATATACTCAACAAGCATAGGAGGGATGAGCACTCTCACTGGGACAGGTGTGAATCTCATATTGATCGGAATGTGGAACAGCTATTTTCCAGAAGCAAAGCCGATCACATTCAGCACCTGGTTCCTTTTCGGGTTCCCTTCGGCTTTGTTGATGTTCTTCGCAATGTGGGCGATCCTTTGCTTCTTGTATTGCTCGAGAAGCTCGGGCCAGGCTCTCTCTTCTTATTTCGACAAGGACTATTTGAAGAAAGAGCTCGAGATGTTGGGTCCAATGGCTTTTGCTGAGAAGATGGTTTTGGCTTTGTTTTTGATGCTGATTTGCTTGTGGATGACAAGAAGCATAACAGATGATATTCCTGGCTGGGGAGTCCTCTTCAAGGGGCGTGCCGGCGATGGAACTGCCAGTGTTATGGTGGCAACTTTGTTGTTTATTGTTCCAAGCAGAAAGCAAAAGGGTGAGAAGTTGATGGACTGGAACAAATGCAAGCAGCTACCCTGGAACGTCATATTGTTACTAGGTGCTGGTTTGGCCATAGCAGACGGAGTTCGATCAAGTGGCCTTGCAGATATATTGTCGAAAACATTGGATTTCTTGGAGGCAGTCCCATATTTAGCTATGGCACCTGCTGTGTGTCTCATAAGCAGTACCATCACTGAGTTGATTACATCCAACAATGCCACTGCGACGCTTATTGTGCCTCTCCTAATTCAGATGGCAAAAACTATACACGTGCATCCACTGCTTCTTATGGTTCCCGGAGGCATTGGTGCGCAGTTTGCTTTCTTGCTTCCCACATCAACCCCATCAAATACAGTTGGATTTGCTACCGGGCACGTTGAAATCCGAGATATGATCATGGTTGGTTTGGCATTAAAGATTGCTGGGATTGCTGTGCTTTCCGTTTTGATGCCCACACTAGGAGCTTTTGTTTTCGGGACAAATGCACGAGTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006873 GO:0006885 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071423 GO:0071702 GO:0098656 GO:0098771 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

562

Amino Acids

61.27

Weight (kDa)

8.83

Isoelectric Point (pI)

40.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	95 - 548	2.7e-53	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	109 - 494	5.6e-41	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47560
fragaria_vesca	FvH4_3g00890 FvH4_3g00891 FvH4_3g00891
malus_domestica	MD05G1358600.v1.1 MD10G1332900.v1.1 MD10G1333000.v1.1
prunus_persica	Prupe.4G009400_v2.0.a1 Prupe.4G009500_v2.0.a1 Prupe.4G009500_v2.0.a1
pyrus_communis	pycom05g32430 pycom10g28220 pycom10g28230 pycom10g28300 pycom10g28330
rosa_chinensis	RchiOBHm_Chr5g0001361 RchiOBHm_Chr5g0001371
rosa_laevigata	RLG00000030922 RLG00000030923
rosa_multiflora	Rmu_co8451069.1_g000001 Rmu_sc0001706.1_g000004 Rmu_sc0003749.1_g000019 Rmu_sc0003900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00074990
rosa_rugosa	Rorug04G0390100.1 Rorug04G0390200
rosa_samantha	Rh5AG010400 Rh5AG010500 Rh5BG013100 Rh5BG013300 Rh5CG011400 Rh5CG011500 Rh5DG010800 Rh5DG010900
rosa_wichuraiana	Rw5G001000 Rw5G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	492
AarI	CACCTGC	1 cut(s)	1363
Acc16I	TGCGCA	1 cut(s)	1503
Acc36I	ACCTGC	1 cut(s)	1363
AccB1I	GGYRCC	2 cut(s)	637, 1351
AccII	CGCG	1 cut(s)	407
AciI	CCGC	6 cut(s)	405, 407, 537, 554, 626, 664
AclWI	GGATC	3 cut(s)	323, 536, 898
AcoI	YGGCCR	1 cut(s)	1260
AcvI	CACGTG	1 cut(s)	1462
AdeI	CACNNNGTG	1 cut(s)	616
AfaI	GTAC	2 cut(s)	428, 1378
AfiI	CCNNNNNNNGG	5 cut(s)	139, 392, 1094, 1108, 1649
AflIII	ACRYGT	1 cut(s)	1459
AgsI	TTSAA	5 cut(s)	150, 190, 976, 1108, 1571
AjnI	CCWGG	5 cut(s)	323, 848, 939, 1087, 1226
AjuI	GAANNNNNNNTTGG	2 cut(s)	1010, 1042
AleI	CACNNNNGTG	1 cut(s)	248
Alw21I	GWGCWC	3 cut(s)	245, 764, 987
Alw26I	GTCTC	2 cut(s)	372, 1370
AlwI	GGATC	3 cut(s)	323, 536, 898
AlwNI	CAGNNNCTG	1 cut(s)	849
Ama87I	CYCGRG	3 cut(s)	925, 934, 986
AoxI	GGCC	4 cut(s)	510, 937, 1260, 1288
ApeKI	GCWGC	4 cut(s)	168, 171, 562, 1219
AspA2I	CCTAGG	1 cut(s)	226
AspLEI	GCGC	1 cut(s)	1504
AspS9I	GGNCC	4 cut(s)	230, 677, 937, 998
AsuC2I	CCSGG	2 cut(s)	1488, 1561
AsuHPI	GGTGA	3 cut(s)	653, 742, 1199
AvaI	CYCGRG	3 cut(s)	925, 934, 986
AvaII	GGWCC	3 cut(s)	230, 677, 998
AvrII	CCTAGG	1 cut(s)	226
BaeGI	GKGCMC	1 cut(s)	1566
BalI	TGGCCA	1 cut(s)	1262
BanI	GGYRCC	2 cut(s)	637, 1351
BanII	GRGCYC	1 cut(s)	987
BauI	CACGAG	1 cut(s)	1677
BbrPI	CACGTG	1 cut(s)	1462
Bbv12I	GWGCWC	3 cut(s)	245, 764, 987
BbvI	GCAGC	4 cut(s)	158, 180, 549, 1231
BccI	CCATC	8 cut(s)	266, 628, 1015, 1118, 1192, 1388, 1438, 1543
BceAI	ACGGC	1 cut(s)	639
BcgI	CGANNNNNNTGC	4 cut(s)	425, 459, 1112, 1146
BciT130I	CCWGG	5 cut(s)	325, 850, 941, 1089, 1228
BclI	TGATCA	1 cut(s)	1584
BcnI	CCSGG	2 cut(s)	1488, 1561
BcoDI	GTCTC	2 cut(s)	372, 1370
BfaI	CTAG	5 cut(s)	227, 285, 725, 1247, 1649
BfuAI	ACCTGC	1 cut(s)	1363
BisI	GCNGC	4 cut(s)	169, 172, 563, 1220
BlnI	CCTAGG	1 cut(s)	226
BlsI	GCNGC	4 cut(s)	170, 173, 564, 1221
Bme1390I	CCNGG	7 cut(s)	325, 850, 941, 1089, 1228, 1488, 1561
Bme18I	GGWCC	3 cut(s)	230, 677, 998
BmeT110I	CYCGRG	3 cut(s)	925, 934, 986
BmgT120I	GGNCC	4 cut(s)	230, 677, 937, 998
BmiI	GGNNCC	8 cut(s)	639, 678, 679, 854, 866, 999, 1353, 1485
BmrFI	CCNGG	7 cut(s)	325, 850, 941, 1089, 1228, 1488, 1561
BmrI	ACTGGG	2 cut(s)	128, 780
BmsI	GCATC	4 cut(s)	597, 1032, 1474, 1629
BmuI	ACTGGG	2 cut(s)	128, 780
BpuMI	CCSGG	2 cut(s)	1488, 1561
BsaAI	YACGTR	1 cut(s)	1462
BsaJI	CCNNGG	3 cut(s)	226, 405, 1226
BsaWI	WCCGGW	1 cut(s)	650
BsaXI	ACNNNNNCTCC	4 cut(s)	200, 230, 1644, 1674
Bsc4I	CCNNNNNNNGG	5 cut(s)	139, 392, 1094, 1108, 1649
Bse118I	RCCGGY	3 cut(s)	640, 688, 1118
Bse1I	ACTGG	4 cut(s)	134, 775, 1134, 1208
Bse3DI	GCAATG	4 cut(s)	283, 441, 557, 900
BseBI	CCWGG	5 cut(s)	325, 850, 941, 1089, 1228
BseDI	CCNNGG	3 cut(s)	226, 405, 1226
BseGI	GGATG	8 cut(s)	203, 415, 495, 612, 762, 1065, 1397, 1465
BseLI	CCNNNNNNNGG	5 cut(s)	139, 392, 1094, 1108, 1649
BseMI	GCAATG	4 cut(s)	283, 441, 557, 900
BseMII	CTCAG	3 cut(s)	105, 1005, 1377
BseNI	ACTGG	4 cut(s)	134, 775, 1134, 1208
BseSI	GKGCMC	1 cut(s)	1566
BseXI	GCAGC	4 cut(s)	158, 180, 549, 1231
BseYI	CCCAGC	2 cut(s)	1092, 1613
Bsh1236I	CGCG	1 cut(s)	407
Bsh1285I	CGRYCG	1 cut(s)	693
BshFI	GGCC	4 cut(s)	512, 939, 1262, 1290
BshNI	GGYRCC	2 cut(s)	637, 1351
BsiEI	CGRYCG	1 cut(s)	693
BsiHKAI	GWGCWC	3 cut(s)	245, 764, 987
BsiHKCI	CYCGRG	3 cut(s)	925, 934, 986
BsiSI	CCGG	7 cut(s)	289, 641, 651, 689, 1119, 1488, 1560
BslFI	GGGAC	5 cut(s)	87, 663, 787, 1319, 1681
BslI	CCNNNNNNNGG	5 cut(s)	139, 392, 1094, 1108, 1649
BsmAI	GTCTC	2 cut(s)	372, 1370
BsmFI	GGGAC	5 cut(s)	87, 663, 787, 1319, 1681
BsnI	GGCC	4 cut(s)	512, 939, 1262, 1290
BsoBI	CYCGRG	3 cut(s)	925, 934, 986
Bsp1286I	GDGCHC	4 cut(s)	245, 764, 987, 1566
Bsp1407I	TGTACA	1 cut(s)	426
Bsp143I	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
BspACI	CCGC	6 cut(s)	405, 407, 537, 554, 626, 664
BspANI	GGCC	4 cut(s)	512, 939, 1262, 1290
BspCNI	CTCAG	3 cut(s)	106, 1006, 1378
BspFNI	CGCG	1 cut(s)	407
BspLI	GGNNCC	8 cut(s)	639, 678, 679, 854, 866, 999, 1353, 1485
BspMI	ACCTGC	1 cut(s)	1363
BspPI	GGATC	3 cut(s)	323, 536, 898
BspT107I	GGYRCC	2 cut(s)	637, 1351
BsrDI	GCAATG	4 cut(s)	283, 441, 557, 900
BsrFI	RCCGGY	3 cut(s)	640, 688, 1118
BsrGI	TGTACA	1 cut(s)	426
BsrI	ACTGG	4 cut(s)	134, 775, 1134, 1208
BssAI	RCCGGY	3 cut(s)	640, 688, 1118
BssECI	CCNNGG	3 cut(s)	226, 405, 1226
BssMI	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
BssSI	CACGAG	1 cut(s)	1677
BssT1I	CCWWGG	1 cut(s)	226
Bst2BI	CACGAG	1 cut(s)	1677
Bst2UI	CCWGG	5 cut(s)	325, 850, 941, 1089, 1228
Bst4CI	ACNGT	3 cut(s)	101, 528, 1546
Bst6I	CTCTTC	3 cut(s)	386, 955, 1109
BstAPI	GCANNNNNTGC	1 cut(s)	1471
BstAUI	TGTACA	1 cut(s)	426
BstBAI	YACGTR	1 cut(s)	1462
BstC8I	GCNNGC	4 cut(s)	300, 1116, 1120, 1217
BstDEI	CTNAG	3 cut(s)	114, 1014, 1386
BstDSI	CCRYGG	1 cut(s)	405
BstENI	CCTNNNNNAGG	1 cut(s)	1106
BstF5I	GGATG	8 cut(s)	203, 415, 495, 612, 762, 1065, 1397, 1465
BstFNI	CGCG	1 cut(s)	407
BstHHI	GCGC	1 cut(s)	1504
BstKTI	GATC	7 cut(s)	318, 544, 798, 837, 906, 1283, 1587
BstMAI	GTCTC	2 cut(s)	372, 1370
BstMBI	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
BstMCI	CGRYCG	1 cut(s)	693
BstNI	CCWGG	5 cut(s)	325, 850, 941, 1089, 1228
BstNSI	RCATGY	2 cut(s)	298, 604
BstSCI	CCNGG	7 cut(s)	323, 848, 939, 1087, 1226, 1486, 1559
BstSLI	GKGCMC	1 cut(s)	1566
BstUI	CGCG	1 cut(s)	407
BstV1I	GCAGC	4 cut(s)	158, 180, 549, 1231
BstX2I	RGATCY	2 cut(s)	315, 541
BstXI	CCANNNNNNTGG	1 cut(s)	1141
BstYI	RGATCY	2 cut(s)	315, 541
BsuRI	GGCC	4 cut(s)	512, 939, 1262, 1290
BtgI	CCRYGG	1 cut(s)	405
BtgZI	GCGATG	1 cut(s)	1137
BtsCI	GGATG	8 cut(s)	203, 415, 495, 612, 762, 1065, 1397, 1465
BtsI	GCAGTG	2 cut(s)	1410, 1469
BtsIMutI	CAGTG	6 cut(s)	524, 768, 1141, 1383, 1410, 1469
BveI	ACCTGC	1 cut(s)	1363
Cac8I	GCNNGC	4 cut(s)	300, 1116, 1120, 1217
CaiI	CAGNNNCTG	1 cut(s)	849
CfoI	GCGC	1 cut(s)	1504
Cfr10I	RCCGGY	3 cut(s)	640, 688, 1118
Cfr13I	GGNCC	4 cut(s)	230, 677, 937, 998
Cfr42I	CCGCGG	1 cut(s)	408
CseI	GACGC	1 cut(s)	1426
CsiI	ACCWGGT	1 cut(s)	848
Csp6I	GTAC	2 cut(s)	427, 1377
CviAII	CATG	5 cut(s)	94, 295, 430, 601, 1588
CviQI	GTAC	2 cut(s)	427, 1377
DdeI	CTNAG	3 cut(s)	114, 1014, 1386
DpnI	GATC	7 cut(s)	317, 543, 797, 836, 905, 1282, 1586
DpnII	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
DraIII	CACNNNGTG	1 cut(s)	616
EaeI	YGGCCR	1 cut(s)	1260
Eam1104I	CTCTTC	3 cut(s)	386, 955, 1109
EarI	CTCTTC	3 cut(s)	386, 955, 1109
EciI	GGCGGA	1 cut(s)	543
Ecl136II	GAGCTC	1 cut(s)	985
Eco130I	CCWWGG	1 cut(s)	226
Eco24I	GRGCYC	1 cut(s)	987
Eco47I	GGWCC	3 cut(s)	230, 677, 998
Eco53kI	GAGCTC	1 cut(s)	985
Eco72I	CACGTG	1 cut(s)	1462
Eco88I	CYCGRG	3 cut(s)	925, 934, 986
EcoICRI	GAGCTC	1 cut(s)	985
EcoNI	CCTNNNNNAGG	1 cut(s)	1106
EcoO109I	RGGNCCY	2 cut(s)	230, 677
EcoRII	CCWGG	5 cut(s)	323, 848, 939, 1087, 1226
EcoT14I	CCWWGG	1 cut(s)	226
EcoT38I	GRGCYC	1 cut(s)	987
ErhI	CCWWGG	1 cut(s)	226
FaeI	CATG	5 cut(s)	97, 298, 433, 604, 1591
FaqI	GGGAC	5 cut(s)	87, 663, 787, 1319, 1681
FatI	CATG	5 cut(s)	93, 294, 429, 600, 1587
FbaI	TGATCA	1 cut(s)	1584
Fnu4HI	GCNGC	4 cut(s)	169, 172, 563, 1220
FokI	GGATG	8 cut(s)	190, 422, 482, 619, 769, 1072, 1384, 1452
FriOI	GRGCYC	1 cut(s)	987
Fsp4HI	GCNGC	4 cut(s)	169, 172, 563, 1220
FspBI	CTAG	5 cut(s)	227, 285, 725, 1247, 1649
FspI	TGCGCA	1 cut(s)	1503
GlaI	GCGC	1 cut(s)	1503
GluI	GCNGC	4 cut(s)	169, 172, 563, 1220
GsaI	CCCAGC	2 cut(s)	1096, 1617
HaeIII	GGCC	4 cut(s)	512, 939, 1262, 1290
HapII	CCGG	7 cut(s)	289, 641, 651, 689, 1119, 1488, 1560
HgaI	GACGC	1 cut(s)	1426
HhaI	GCGC	1 cut(s)	1504
Hin1II	CATG	5 cut(s)	97, 298, 433, 604, 1591
Hin6I	GCGC	1 cut(s)	1502
HinP1I	GCGC	1 cut(s)	1502
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	5 cut(s)	550, 654, 721, 784, 1098
HpaII	CCGG	7 cut(s)	289, 641, 651, 689, 1119, 1488, 1560
HphI	GGTGA	3 cut(s)	653, 742, 1199
Hpy188I	TCNGA	5 cut(s)	549, 672, 800, 1443, 1577
Hpy188III	TCNNGA	5 cut(s)	79, 821, 927, 988, 1666
Hpy99I	CGWCG	2 cut(s)	676, 1420
HpyAV	CCTTC	2 cut(s)	668, 879
HpyCH4III	ACNGT	3 cut(s)	101, 528, 1546
HpyCH4IV	ACGT	4 cut(s)	615, 1233, 1461, 1566
HpyCH4V	TGCA	7 cut(s)	419, 610, 711, 1215, 1295, 1465, 1676
HpyF3I	CTNAG	3 cut(s)	114, 1014, 1386
HpySE526I	ACGT	4 cut(s)	615, 1233, 1461, 1566
Hsp92II	CATG	5 cut(s)	97, 298, 433, 604, 1591
HspAI	GCGC	1 cut(s)	1502
KflI	GGGWCCC	1 cut(s)	677
KroI	GCCGGC	1 cut(s)	1118
KroNI	GCCGGC	1 cut(s)	1120
Ksp22I	TGATCA	1 cut(s)	1584
KspI	CCGCGG	1 cut(s)	408
Kzo9I	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
LmnI	GCTCC	1 cut(s)	1652
Lsp1109I	GCAGC	4 cut(s)	158, 180, 549, 1231
LweI	GCATC	4 cut(s)	597, 1032, 1474, 1629
MabI	ACCWGGT	1 cut(s)	848
MaeI	CTAG	5 cut(s)	227, 285, 725, 1247, 1649
MaeII	ACGT	4 cut(s)	615, 1233, 1461, 1566
MaeIII	GTNAC	3 cut(s)	62, 280, 1242
MalI	GATC	7 cut(s)	317, 543, 797, 836, 905, 1282, 1586
MboI	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
MboII	GAAGA	9 cut(s)	94, 310, 373, 382, 880, 942, 988, 1030, 1096
MflI	RGATCY	2 cut(s)	315, 541
MhlI	GDGCHC	4 cut(s)	245, 764, 987, 1566
MlsI	TGGCCA	1 cut(s)	1262
MluCI	AATT	3 cut(s)	33, 145, 1437
MluNI	TGGCCA	1 cut(s)	1262
MlyI	GAGTC	1 cut(s)	1107
MmeI	TCCRAC	5 cut(s)	231, 695, 1425, 1528, 1663
Mox20I	TGGCCA	1 cut(s)	1262
MroNI	GCCGGC	1 cut(s)	1118
MscI	TGGCCA	1 cut(s)	1262
MseI	TTAA	4 cut(s)	6, 36, 515, 1604
MslI	CAYNNNNRTG	3 cut(s)	248, 599, 605
Msp20I	TGGCCA	1 cut(s)	1262
MspA1I	CMGCKG	2 cut(s)	171, 407
MspI	CCGG	7 cut(s)	289, 641, 651, 689, 1119, 1488, 1560
MspR9I	CCNGG	7 cut(s)	325, 850, 941, 1089, 1228, 1488, 1561
MvaI	CCWGG	5 cut(s)	325, 850, 941, 1089, 1228
MvnI	CGCG	1 cut(s)	407
NaeI	GCCGGC	1 cut(s)	1120
NciI	CCSGG	2 cut(s)	1488, 1561
NdeII	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
NgoMIV	GCCGGC	1 cut(s)	1118
NlaIII	CATG	5 cut(s)	97, 298, 433, 604, 1591
NlaIV	GGNNCC	8 cut(s)	639, 678, 679, 854, 866, 999, 1353, 1485
NmuCI	GTSAC	2 cut(s)	62, 280
NsbI	TGCGCA	1 cut(s)	1503
NspI	RCATGY	2 cut(s)	298, 604
OliI	CACNNNNGTG	1 cut(s)	248
PaeR7I	CTCGAG	2 cut(s)	925, 986
PaqCI	CACCTGC	1 cut(s)	1363
PdiI	GCCGGC	1 cut(s)	1120
PfeI	GAWTC	4 cut(s)	550, 654, 721, 784
PfoI	TCCNGGA	1 cut(s)	1486
PkrI	GCNGC	4 cut(s)	170, 173, 564, 1221
PleI	GAGTC	1 cut(s)	1106
PmaCI	CACGTG	1 cut(s)	1462
PmlI	CACGTG	1 cut(s)	1462
PpsI	GAGTC	1 cut(s)	1106
Ppu21I	YACGTR	1 cut(s)	1462
PpuMI	RGGWCCY	2 cut(s)	230, 677
PsiI	TTATAA	1 cut(s)	492
Psp124BI	GAGCTC	1 cut(s)	987
Psp5II	RGGWCCY	2 cut(s)	230, 677
Psp6I	CCWGG	5 cut(s)	323, 848, 939, 1087, 1226
PspCI	CACGTG	1 cut(s)	1462
PspFI	CCCAGC	2 cut(s)	1092, 1613
PspGI	CCWGG	5 cut(s)	323, 848, 939, 1087, 1226
PspN4I	GGNNCC	8 cut(s)	639, 678, 679, 854, 866, 999, 1353, 1485
PspPI	GGNCC	4 cut(s)	230, 677, 937, 998
PspPPI	RGGWCCY	2 cut(s)	230, 677
PstNI	CAGNNNCTG	1 cut(s)	849
PsuI	RGATCY	2 cut(s)	315, 541
PvuII	CAGCTG	1 cut(s)	171
RsaI	GTAC	2 cut(s)	428, 1378
RsaNI	GTAC	2 cut(s)	427, 1377
RseI	CAYNNNNRTG	3 cut(s)	248, 599, 605
SacI	GAGCTC	1 cut(s)	987
SacII	CCGCGG	1 cut(s)	408
SaqAI	TTAA	4 cut(s)	6, 36, 515, 1604
SatI	GCNGC	4 cut(s)	169, 172, 563, 1220
Sau3AI	GATC	7 cut(s)	315, 541, 795, 834, 903, 1280, 1584
Sau96I	GGNCC	4 cut(s)	230, 677, 937, 998
SchI	GAGTC	1 cut(s)	1107
ScrFI	CCNGG	7 cut(s)	325, 850, 941, 1089, 1228, 1488, 1561
SduI	GDGCHC	4 cut(s)	245, 764, 987, 1566
SexAI	ACCWGGT	1 cut(s)	848
SfaNI	GCATC	4 cut(s)	597, 1032, 1474, 1629
Sfr274I	CTCGAG	2 cut(s)	925, 986
Sfr303I	CCGCGG	1 cut(s)	408
SgrBI	CCGCGG	1 cut(s)	408
SinI	GGWCC	3 cut(s)	230, 677, 998
SlaI	CTCGAG	2 cut(s)	925, 986
SmiMI	CAYNNNNRTG	3 cut(s)	248, 599, 605
SmlI	CTYRAG	2 cut(s)	925, 986
SmoI	CTYRAG	2 cut(s)	925, 986
Sse9I	AATT	3 cut(s)	33, 145, 1437
SsiI	CCGC	6 cut(s)	405, 407, 537, 554, 626, 664
SspI	AATATT	1 cut(s)	520
SspMI	CTAG	5 cut(s)	227, 285, 725, 1247, 1649
SstI	GAGCTC	1 cut(s)	987
StyD4I	CCNGG	7 cut(s)	323, 848, 939, 1087, 1226, 1486, 1559
StyI	CCWWGG	1 cut(s)	226
TaaI	ACNGT	3 cut(s)	101, 528, 1546
TaiI	ACGT	4 cut(s)	618, 1236, 1464, 1569
TaqI	TCGA	6 cut(s)	270, 926, 960, 987, 1279, 1307
TasI	AATT	3 cut(s)	33, 145, 1437
TatI	WGTACW	1 cut(s)	426
TfiI	GAWTC	4 cut(s)	550, 654, 721, 784
Tru1I	TTAA	4 cut(s)	6, 36, 515, 1604
Tru9I	TTAA	4 cut(s)	6, 36, 515, 1604
TscAI	CASTG	6 cut(s)	531, 775, 1141, 1390, 1417, 1476
TseFI	GTSAC	2 cut(s)	62, 280
TseI	GCWGC	4 cut(s)	168, 171, 562, 1219
Tsp45I	GTSAC	2 cut(s)	62, 280
TspDTI	ATGAA	2 cut(s)	446, 583
TspGWI	ACGGA	2 cut(s)	1287, 1621
TspRI	CASTG	6 cut(s)	531, 775, 1141, 1390, 1417, 1476
VpaK11BI	GGWCC	3 cut(s)	230, 677, 998
XagI	CCTNNNNNAGG	1 cut(s)	1106
XceI	RCATGY	2 cut(s)	298, 604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1141
XhoI	CTCGAG	2 cut(s)	925, 986
XmaJI	CCTAGG	1 cut(s)	226
XspI	CTAG	5 cut(s)	227, 285, 725, 1247, 1649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.