Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0003352

Physical Location & Seq

Genomic Coordinates Forward (+)

28892543 .. 28898300

Gene Structure 5758 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g28220.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGTATCACATCATCCAATATCCGAAGACCCCAAAACCCCGCTTCTCCATCTCCACGATCGATCTGGAAATCCAACGGTCGCAGAGCTTCCATTCATCCTTGAAATCCATTCTAACACTCGAGAACTTCTTCATCCTCCTCGGACCTCTTCTGTGCACCATCATATGCCTCTGTGTGAAGCTAGATGGCCCGGTGGCCAGCCGGAACATGTTGGCGGTGCTGGTATGGGTGTTTGCTTGGTGGCTCACGGAGGCCGTGCCGATGCCAGTTACCTCATTGTCCCCTCTCTTCCTCTTCCCGCTCTTCGGAATTGCCTCTGCAGATGATGTTGCCCACTCTTACATGAACGATGTTATTGCCCTTGTTCTTGGAAGCTTTATTTTGGCTCTCGCCGTTGAGCATTATAACATACCCAAAAGATTCGCCTTGAATATAACCCTGGTGTTCTATGGAGACCCCTTGAATCCGCCATTGATGCTGCTGGGAATATGTGGGACCGCAACATTCATCAGCATGTGGATGCACAACACGGCAACTGCCGTGATGATGATGCCCGTAGCCACCGGCATTCTCCGGCGGTTTCCGACGGGTCCCGACCAGTCCGTGGTCGTGAGCAACTTTTGCAAAGCGGTGATTCTGGGGGTGTTATACTCCATAACCATAGGAGGGATGAGCACTCTGACGGGGACCGATGTCAATCTCATATTGGTTGGAATGTGGAAGAGCTATTTCCCACAAGCAGCTCCGATCACCTTCAGCACCTGGTTCGGTTTCGCCTTCCCTTCGGCATTGTTGATGTTCTTGGCTTTGTGGGGTTTGCTTTGCTGCTTGTATTGCTCAAGGAGTTCAGGCCAGGCTCTCTCTGTTTATTTAGACAAATCCCATTTGAAGGAGGAGCTCAAATTGCTAGGTCCAATGGCTTTTGCTGAGAAGATGGTACTGGCTTTGTTTTCGATGCTGATTGTTTTGTGGATGACAAGAAGCATAACGGAGGATATTCCGGGTTGGGGAGTCCTCTTCAACGGGCATGCCGGAGATGGAACTGTCAGTGTTATGATTGCAACTTTTTTGTTCACAATTCCAAGCCAAAAACAAAAAGGTGAGAAGTTGATGGACTGGGAAAAATGCAAGAAGCTACCCTGGAATATCATATTGTTACTAGGTGCTGGTTTAGCTATAACTGACGGAGTTCGATCCAGTGGCCTTGCTAATATATTATCCGAAACCCTAGCTTTTTTGGAGGCAGTCCCATATGTTGCAATTGCACCTGCTGTGTGTCTCATAAGTAGTTCCATCACTGAGTTGATCATATCAAACAATGCAACAACCACGCTTATTATTCCTCTCCTAATTCAAATTGCCAAACGTATGCATGTGCATCCTCTCCTTCTGATGATTCCGGGAGGCATTGGGGCACAATTTGCTTTCTTGCTTCCTACGGCAACTCCTTCAAATACCGTAGGATTCGCCACTGGCCACATTGAGATCCAAGATATGATCAAGATTGGCTTGCCATTGAAGATTGTTGGGATTGCTGTGTTGTCCCTTTTGATGCCCACTCTTGGTATCATTCCTTTTCTCTTCATTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0006873 GO:0006885 GO:0008150 GO:0008509 GO:0008514 GO:0009987 GO:0015075 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015740 GO:0015743 GO:0015849 GO:0016020 GO:0016021 GO:0019725 GO:0022857 GO:0030003 GO:0030004 GO:0030641 GO:0031224 GO:0034220 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071423 GO:0071702 GO:0098656 GO:0098771 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

531

Amino Acids

57.82

Weight (kDa)

7.99

Isoelectric Point (pI)

47.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47560
fragaria_vesca	FvH4_3g00890 FvH4_3g00891 FvH4_3g00891
malus_domestica	MD05G1358600.v1.1 MD10G1332900.v1.1 MD10G1333000.v1.1
prunus_persica	Prupe.4G009400_v2.0.a1 Prupe.4G009500_v2.0.a1 Prupe.4G009500_v2.0.a1
pyrus_communis	pycom05g32430 pycom10g28220 pycom10g28230 pycom10g28300 pycom10g28330
rosa_chinensis	RchiOBHm_Chr5g0001361 RchiOBHm_Chr5g0001371
rosa_laevigata	RLG00000030922 RLG00000030923
rosa_multiflora	Rmu_co8451069.1_g000001 Rmu_sc0001706.1_g000004 Rmu_sc0003749.1_g000019 Rmu_sc0003900.1_g000003
rosa_roxburghii	Rroxscaffold_1G00074990
rosa_rugosa	Rorug04G0390100.1 Rorug04G0390200
rosa_samantha	Rh5AG010400 Rh5AG010500 Rh5BG013100 Rh5BG013300 Rh5CG011400 Rh5CG011500 Rh5DG010800 Rh5DG010900
rosa_wichuraiana	Rw5G001000 Rw5G001010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	405
AarI	CACCTGC	1 cut(s)	1276
Acc36I	ACCTGC	1 cut(s)	1276
AccB7I	CCANNNNNTGG	1 cut(s)	604
AccBSI	CCGCTC	1 cut(s)	301
AciI	CCGC	7 cut(s)	40, 215, 299, 467, 498, 577, 629
AclWI	GGATC	2 cut(s)	1188, 1480
AcoI	YGGCCR	2 cut(s)	195, 1474
AcuI	CTGAAG	1 cut(s)	739
AfaI	GTAC	1 cut(s)	939
AfiI	CCNNNNNNNGG	6 cut(s)	305, 604, 666, 889, 1007, 1562
AflIII	ACRYGT	1 cut(s)	207
AgsI	TTSAA	8 cut(s)	103, 430, 463, 889, 1021, 1355, 1452, 1519
AjnI	CCWGG	4 cut(s)	438, 761, 852, 1139
AluBI	AGCT	9 cut(s)	87, 181, 375, 726, 743, 898, 1135, 1175, 1232
AluI	AGCT	9 cut(s)	87, 181, 375, 726, 743, 898, 1135, 1175, 1232
Alw21I	GWGCWC	3 cut(s)	158, 677, 900
Alw26I	GTCTC	2 cut(s)	447, 1283
Alw44I	GTGCAC	1 cut(s)	154
AlwI	GGATC	2 cut(s)	1188, 1480
AlwNI	CAGNNNCTG	1 cut(s)	762
Ama87I	CYCGRG	1 cut(s)	119
AoxI	GGCC	6 cut(s)	187, 195, 252, 850, 1201, 1474
ApaLI	GTGCAC	1 cut(s)	154
ApeKI	GCWGC	3 cut(s)	478, 740, 825
Asp700I	GAANNNNTTC	1 cut(s)	128
AspS9I	GGNCC	6 cut(s)	143, 188, 495, 590, 687, 911
AsuC2I	CCSGG	3 cut(s)	191, 1002, 1401
AsuHPI	GGTGA	3 cut(s)	643, 742, 1112
AvaI	CYCGRG	1 cut(s)	119
AvaII	GGWCC	5 cut(s)	143, 495, 590, 687, 911
BaeGI	GKGCMC	2 cut(s)	158, 1417
BalI	TGGCCA	2 cut(s)	197, 1476
BanII	GRGCYC	1 cut(s)	900
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	3 cut(s)	158, 677, 900
BbvI	GCAGC	3 cut(s)	465, 752, 812
BccI	CCATC	7 cut(s)	56, 167, 179, 928, 1031, 1105, 1301
BceAI	ACGGC	5 cut(s)	239, 377, 524, 546, 1455
BcgI	CGANNNNNNTGC	4 cut(s)	338, 372, 748, 782
BciT130I	CCWGG	4 cut(s)	440, 763, 854, 1141
BclI	TGATCA	2 cut(s)	1305, 1497
BcnI	CCSGG	3 cut(s)	191, 1002, 1401
BcoDI	GTCTC	2 cut(s)	447, 1283
BfaI	CTAG	4 cut(s)	182, 908, 1160, 1229
BfmI	CTRYAG	1 cut(s)	318
BfuAI	ACCTGC	1 cut(s)	1276
BisI	GCNGC	3 cut(s)	479, 741, 826
BlsI	GCNGC	3 cut(s)	480, 742, 827
Bme1390I	CCNGG	7 cut(s)	191, 440, 763, 854, 1002, 1141, 1401
Bme18I	GGWCC	5 cut(s)	143, 495, 590, 687, 911
BmeT110I	CYCGRG	1 cut(s)	119
BmgT120I	GGNCC	6 cut(s)	143, 188, 495, 590, 687, 911
BmiI	GGNNCC	4 cut(s)	496, 591, 592, 688
BmrFI	CCNGG	7 cut(s)	191, 440, 763, 854, 1002, 1141, 1401
BmrI	ACTGGG	1 cut(s)	1126
BmsI	GCATC	7 cut(s)	252, 465, 510, 540, 945, 1387, 1542
BmuI	ACTGGG	1 cut(s)	1126
BoxI	GACNNNNGTC	1 cut(s)	692
BpiI	GAAGAC	1 cut(s)	32
BpuEI	CTTGAG	1 cut(s)	823
BpuMI	CCSGG	3 cut(s)	191, 1002, 1401
Bsa29I	ATCGAT	1 cut(s)	60
BsaBI	GATNNNNATC	1 cut(s)	696
BsaI	GGTCTC	1 cut(s)	447
BsaJI	CCNNGG	4 cut(s)	139, 438, 603, 1139
BsaXI	ACNNNNNCTCC	2 cut(s)	1429, 1459
Bsc4I	CCNNNNNNNGG	6 cut(s)	305, 604, 666, 889, 1007, 1562
Bse118I	RCCGGY	1 cut(s)	563
Bse1I	ACTGG	6 cut(s)	266, 598, 945, 1121, 1197, 1477
Bse8I	GATNNNNATC	1 cut(s)	696
BseBI	CCWGG	4 cut(s)	440, 763, 854, 1141
BseCI	ATCGAT	1 cut(s)	60
BseDI	CCNNGG	4 cut(s)	139, 438, 603, 1139
BseGI	GGATG	7 cut(s)	12, 95, 132, 525, 675, 978, 1378
BseJI	GATNNNNATC	1 cut(s)	696
BseLI	CCNNNNNNNGG	6 cut(s)	305, 604, 666, 889, 1007, 1562
BseMII	CTCAG	2 cut(s)	918, 1290
BseNI	ACTGG	6 cut(s)	266, 598, 945, 1121, 1197, 1477
BseRI	GAGGAG	2 cut(s)	128, 908
BseSI	GKGCMC	2 cut(s)	158, 1417
BseXI	GCAGC	3 cut(s)	465, 752, 812
BseYI	CCCAGC	1 cut(s)	481
Bsh1285I	CGRYCG	2 cut(s)	60, 80
BshFI	GGCC	6 cut(s)	189, 197, 254, 852, 1203, 1476
BshVI	ATCGAT	1 cut(s)	60
BsiEI	CGRYCG	2 cut(s)	60, 80
BsiHKAI	GWGCWC	3 cut(s)	158, 677, 900
BsiHKCI	CYCGRG	1 cut(s)	119
BsiSI	CCGG	7 cut(s)	191, 202, 564, 574, 1001, 1032, 1400
BslFI	GGGAC	6 cut(s)	265, 508, 576, 700, 1232, 1528
BslI	CCNNNNNNNGG	6 cut(s)	305, 604, 666, 889, 1007, 1562
BsmAI	GTCTC	2 cut(s)	447, 1283
BsmFI	GGGAC	6 cut(s)	265, 508, 576, 700, 1232, 1528
BsmI	GAATGC	1 cut(s)	567
BsnI	GGCC	6 cut(s)	189, 197, 254, 852, 1203, 1476
Bso31I	GGTCTC	1 cut(s)	447
BsoBI	CYCGRG	1 cut(s)	119
Bsp1286I	GDGCHC	4 cut(s)	158, 677, 900, 1417
Bsp143I	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
BspACI	CCGC	7 cut(s)	40, 215, 299, 467, 498, 577, 629
BspANI	GGCC	6 cut(s)	189, 197, 254, 852, 1203, 1476
BspCNI	CTCAG	2 cut(s)	919, 1291
BspDI	ATCGAT	1 cut(s)	60
BspLI	GGNNCC	4 cut(s)	496, 591, 592, 688
BspMAI	CTGCAG	1 cut(s)	322
BspMI	ACCTGC	1 cut(s)	1276
BspPI	GGATC	2 cut(s)	1188, 1480
BspQI	GCTCTTC	2 cut(s)	308, 716
BspTNI	GGTCTC	1 cut(s)	447
BsrBI	CCGCTC	1 cut(s)	301
BsrFI	RCCGGY	1 cut(s)	563
BsrI	ACTGG	6 cut(s)	266, 598, 945, 1121, 1197, 1477
BssAI	RCCGGY	1 cut(s)	563
BssECI	CCNNGG	4 cut(s)	139, 438, 603, 1139
BssMI	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
Bst2UI	CCWGG	4 cut(s)	440, 763, 854, 1141
Bst4CI	ACNGT	3 cut(s)	78, 1045, 1459
Bst6I	CTCTTC	7 cut(s)	153, 293, 299, 308, 716, 1022, 1586
BstAPI	GCANNNNNTGC	2 cut(s)	621, 1421
BstC8I	GCNNGC	3 cut(s)	199, 1029, 1511
BstDEI	CTNAG	2 cut(s)	927, 1299
BstDSI	CCRYGG	1 cut(s)	603
BstF5I	GGATG	7 cut(s)	12, 95, 132, 525, 675, 978, 1378
BstKTI	GATC	7 cut(s)	60, 64, 750, 1196, 1308, 1488, 1500
BstMAI	GTCTC	2 cut(s)	447, 1283
BstMBI	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
BstMCI	CGRYCG	2 cut(s)	60, 80
BstMWI	GCNNNNNNNGC	6 cut(s)	475, 621, 834, 904, 1172, 1421
BstNI	CCWGG	4 cut(s)	440, 763, 854, 1141
BstNSI	RCATGY	4 cut(s)	211, 517, 1031, 1376
BstPAI	GACNNNNGTC	1 cut(s)	692
BstSCI	CCNGG	7 cut(s)	189, 438, 761, 852, 1000, 1139, 1399
BstSFI	CTRYAG	1 cut(s)	318
BstSLI	GKGCMC	2 cut(s)	158, 1417
BstV1I	GCAGC	3 cut(s)	465, 752, 812
BstV2I	GAAGAC	1 cut(s)	32
BstX2I	RGATCY	1 cut(s)	1485
BstYI	RGATCY	1 cut(s)	1485
Bsu15I	ATCGAT	1 cut(s)	60
BsuRI	GGCC	6 cut(s)	189, 197, 254, 852, 1203, 1476
BsuTUI	ATCGAT	1 cut(s)	60
BtgI	CCRYGG	1 cut(s)	603
BtsCI	GGATG	7 cut(s)	12, 95, 132, 525, 675, 978, 1378
BtsIMutI	CAGTG	4 cut(s)	1054, 1204, 1296, 1470
BveI	ACCTGC	1 cut(s)	1276
Cac8I	GCNNGC	3 cut(s)	199, 1029, 1511
CaiI	CAGNNNCTG	1 cut(s)	762
Cfr10I	RCCGGY	1 cut(s)	563
Cfr13I	GGNCC	6 cut(s)	143, 188, 495, 590, 687, 911
ClaI	ATCGAT	1 cut(s)	60
CsiI	ACCWGGT	1 cut(s)	761
Csp6I	GTAC	1 cut(s)	938
CviAII	CATG	5 cut(s)	208, 343, 514, 1028, 1373
CviQI	GTAC	1 cut(s)	938
DdeI	CTNAG	2 cut(s)	927, 1299
DpnI	GATC	7 cut(s)	59, 63, 749, 1195, 1307, 1487, 1499
DpnII	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
EaeI	YGGCCR	2 cut(s)	195, 1474
Eam1104I	CTCTTC	7 cut(s)	153, 293, 299, 308, 716, 1022, 1586
EarI	CTCTTC	7 cut(s)	153, 293, 299, 308, 716, 1022, 1586
EciI	GGCGGA	1 cut(s)	456
Ecl136II	GAGCTC	1 cut(s)	898
Eco24I	GRGCYC	1 cut(s)	900
Eco31I	GGTCTC	1 cut(s)	447
Eco47I	GGWCC	5 cut(s)	143, 495, 590, 687, 911
Eco53kI	GAGCTC	1 cut(s)	898
Eco57I	CTGAAG	1 cut(s)	739
Eco88I	CYCGRG	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	898
EcoO109I	RGGNCCY	1 cut(s)	590
EcoRII	CCWGG	4 cut(s)	438, 761, 852, 1139
EcoT22I	ATGCAT	1 cut(s)	1374
EcoT38I	GRGCYC	1 cut(s)	900
FaeI	CATG	5 cut(s)	211, 346, 517, 1031, 1376
FalI	AAGNNNNNCTT	2 cut(s)	1493, 1525
FaqI	GGGAC	6 cut(s)	265, 508, 576, 700, 1232, 1528
FatI	CATG	5 cut(s)	207, 342, 513, 1027, 1372
FauI	CCCGC	2 cut(s)	47, 306
FauNDI	CATATG	2 cut(s)	164, 1252
FbaI	TGATCA	2 cut(s)	1305, 1497
Fnu4HI	GCNGC	3 cut(s)	479, 741, 826
FokI	GGATG	6 cut(s)	82, 119, 532, 682, 985, 1365
FriOI	GRGCYC	1 cut(s)	900
Fsp4HI	GCNGC	3 cut(s)	479, 741, 826
FspBI	CTAG	4 cut(s)	182, 908, 1160, 1229
GluI	GCNGC	3 cut(s)	479, 741, 826
GsaI	CCCAGC	1 cut(s)	485
HaeIII	GGCC	6 cut(s)	189, 197, 254, 852, 1203, 1476
HapII	CCGG	7 cut(s)	191, 202, 564, 574, 1001, 1032, 1400
Hin1II	CATG	5 cut(s)	211, 346, 517, 1031, 1376
HindIII	AAGCTT	1 cut(s)	373
HinfI	GANTC	6 cut(s)	420, 463, 634, 1011, 1396, 1464
HpaII	CCGG	7 cut(s)	191, 202, 564, 574, 1001, 1032, 1400
HphI	GGTGA	3 cut(s)	643, 742, 1112
Hpy166II	GTNNAC	2 cut(s)	156, 1074
Hpy188I	TCNGA	8 cut(s)	24, 143, 308, 585, 681, 747, 1222, 1392
Hpy188III	TCNNGA	5 cut(s)	65, 121, 593, 610, 1501
Hpy8I	GTNNAC	2 cut(s)	156, 1074
Hpy99I	CGWCG	1 cut(s)	589
HpyAV	CCTTC	6 cut(s)	763, 787, 792, 883, 1397, 1458
HpyCH4III	ACNGT	3 cut(s)	78, 1045, 1459
HpyCH4IV	ACGT	1 cut(s)	1366
HpyF10VI	GCNNNNNNNGC	6 cut(s)	475, 621, 834, 904, 1172, 1421
HpyF3I	CTNAG	2 cut(s)	927, 1299
HpySE526I	ACGT	1 cut(s)	1366
Hsp92II	CATG	5 cut(s)	211, 346, 517, 1031, 1376
KflI	GGGWCCC	1 cut(s)	590
Ksp22I	TGATCA	2 cut(s)	1305, 1497
Kzo9I	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
LguI	GCTCTTC	2 cut(s)	308, 716
LmnI	GCTCC	2 cut(s)	748, 895
Lsp1109I	GCAGC	3 cut(s)	465, 752, 812
LweI	GCATC	7 cut(s)	252, 465, 510, 540, 945, 1387, 1542
MabI	ACCWGGT	1 cut(s)	761
MaeI	CTAG	4 cut(s)	182, 908, 1160, 1229
MaeII	ACGT	1 cut(s)	1366
MaeIII	GTNAC	2 cut(s)	268, 1155
MalI	GATC	7 cut(s)	59, 63, 749, 1195, 1307, 1487, 1499
MbiI	CCGCTC	1 cut(s)	301
MboI	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
MfeI	CAATTG	1 cut(s)	1260
MflI	RGATCY	1 cut(s)	1485
MhlI	GDGCHC	4 cut(s)	158, 677, 900, 1417
MlsI	TGGCCA	2 cut(s)	197, 1476
MluCI	AATT	7 cut(s)	309, 902, 1077, 1260, 1350, 1356, 1418
MluNI	TGGCCA	2 cut(s)	197, 1476
MlyI	GAGTC	1 cut(s)	1020
MmeI	TCCRAC	3 cut(s)	97, 608, 691
Mox20I	TGGCCA	2 cut(s)	197, 1476
Mph1103I	ATGCAT	1 cut(s)	1374
MroXI	GAANNNNTTC	1 cut(s)	128
MscI	TGGCCA	2 cut(s)	197, 1476
MslI	CAYNNNNRTG	2 cut(s)	512, 518
Msp20I	TGGCCA	2 cut(s)	197, 1476
MspI	CCGG	7 cut(s)	191, 202, 564, 574, 1001, 1032, 1400
MspR9I	CCNGG	7 cut(s)	191, 440, 763, 854, 1002, 1141, 1401
MunI	CAATTG	1 cut(s)	1260
Mva1269I	GAATGC	1 cut(s)	567
MvaI	CCWGG	4 cut(s)	440, 763, 854, 1141
MwoI	GCNNNNNNNGC	6 cut(s)	475, 621, 834, 904, 1172, 1421
NciI	CCSGG	3 cut(s)	191, 1002, 1401
NdeI	CATATG	2 cut(s)	164, 1252
NdeII	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
NlaIII	CATG	5 cut(s)	211, 346, 517, 1031, 1376
NlaIV	GGNNCC	4 cut(s)	496, 591, 592, 688
NsiI	ATGCAT	1 cut(s)	1374
NspI	RCATGY	4 cut(s)	211, 517, 1031, 1376
PaeI	GCATGC	1 cut(s)	1031
PaeR7I	CTCGAG	1 cut(s)	119
PaqCI	CACCTGC	1 cut(s)	1276
PciI	ACATGT	1 cut(s)	207
PciSI	GCTCTTC	2 cut(s)	308, 716
PctI	GAATGC	1 cut(s)	567
PdmI	GAANNNNTTC	1 cut(s)	128
PfeI	GAWTC	5 cut(s)	420, 463, 634, 1396, 1464
PflMI	CCANNNNNTGG	1 cut(s)	604
PfoI	TCCNGGA	1 cut(s)	1399
PkrI	GCNGC	3 cut(s)	480, 742, 827
Ple19I	CGATCG	1 cut(s)	60
PleI	GAGTC	1 cut(s)	1019
PpsI	GAGTC	1 cut(s)	1019
PpuMI	RGGWCCY	1 cut(s)	590
PscI	ACATGT	1 cut(s)	207
PshAI	GACNNNNGTC	1 cut(s)	692
PsiI	TTATAA	1 cut(s)	405
Psp124BI	GAGCTC	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	4 cut(s)	438, 761, 852, 1139
PspFI	CCCAGC	1 cut(s)	481
PspGI	CCWGG	4 cut(s)	438, 761, 852, 1139
PspN4I	GGNNCC	4 cut(s)	496, 591, 592, 688
PspPI	GGNCC	6 cut(s)	143, 188, 495, 590, 687, 911
PspPPI	RGGWCCY	1 cut(s)	590
PstI	CTGCAG	1 cut(s)	322
PstNI	CAGNNNCTG	1 cut(s)	762
PsuI	RGATCY	1 cut(s)	1485
PvuI	CGATCG	1 cut(s)	60
RsaI	GTAC	1 cut(s)	939
RsaNI	GTAC	1 cut(s)	938
RseI	CAYNNNNRTG	2 cut(s)	512, 518
SacI	GAGCTC	1 cut(s)	900
SapI	GCTCTTC	2 cut(s)	308, 716
SatI	GCNGC	3 cut(s)	479, 741, 826
Sau3AI	GATC	7 cut(s)	57, 61, 747, 1193, 1305, 1485, 1497
Sau96I	GGNCC	6 cut(s)	143, 188, 495, 590, 687, 911
SchI	GAGTC	1 cut(s)	1020
ScrFI	CCNGG	7 cut(s)	191, 440, 763, 854, 1002, 1141, 1401
SduI	GDGCHC	4 cut(s)	158, 677, 900, 1417
SexAI	ACCWGGT	1 cut(s)	761
SfaNI	GCATC	7 cut(s)	252, 465, 510, 540, 945, 1387, 1542
SfcI	CTRYAG	1 cut(s)	318
Sfr274I	CTCGAG	1 cut(s)	119
SinI	GGWCC	5 cut(s)	143, 495, 590, 687, 911
SlaI	CTCGAG	1 cut(s)	119
SmiMI	CAYNNNNRTG	2 cut(s)	512, 518
SmlI	CTYRAG	2 cut(s)	119, 838
SmoI	CTYRAG	2 cut(s)	119, 838
SphI	GCATGC	1 cut(s)	1031
Sse9I	AATT	7 cut(s)	309, 902, 1077, 1260, 1350, 1356, 1418
SsiI	CCGC	7 cut(s)	40, 215, 299, 467, 498, 577, 629
SspMI	CTAG	4 cut(s)	182, 908, 1160, 1229
SstI	GAGCTC	1 cut(s)	900
StyD4I	CCNGG	7 cut(s)	189, 438, 761, 852, 1000, 1139, 1399
TaaI	ACNGT	3 cut(s)	78, 1045, 1459
TaiI	ACGT	1 cut(s)	1369
TaqI	TCGA	4 cut(s)	60, 120, 953, 1192
TaqII	GACCGA	1 cut(s)	704
TasI	AATT	7 cut(s)	309, 902, 1077, 1260, 1350, 1356, 1418
TfiI	GAWTC	5 cut(s)	420, 463, 634, 1396, 1464
TscAI	CASTG	4 cut(s)	1054, 1204, 1303, 1477
TseI	GCWGC	3 cut(s)	478, 740, 825
TspDTI	ATGAA	5 cut(s)	84, 121, 359, 496, 1573
TspGWI	ACGGA	4 cut(s)	263, 592, 1004, 1200
TspRI	CASTG	4 cut(s)	1054, 1204, 1303, 1477
Van91I	CCANNNNNTGG	1 cut(s)	604
VneI	GTGCAC	1 cut(s)	154
VpaK11BI	GGWCC	5 cut(s)	143, 495, 590, 687, 911
XceI	RCATGY	4 cut(s)	211, 517, 1031, 1376
XcmI	CCANNNNNNNNNTGG	1 cut(s)	61
XhoI	CTCGAG	1 cut(s)	119
XmnI	GAANNNNTTC	1 cut(s)	128
XspI	CTAG	4 cut(s)	182, 908, 1160, 1229
Zsp2I	ATGCAT	1 cut(s)	1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.