Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007288

Physical Location & Seq

Genomic Coordinates Forward (+)

2260488 .. 2269210

Gene Structure 8723 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g04050.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGAAACCGACGAAGAACAACGCGTCACTCCCTTCCAGCTCCAGTTCGACAAGCCAGTCGCTTCGCAGATTAAAATCGCGGAGTGGAATCCCGAGAAGGATTTACTGGCCATGGTTACTGAGGACTCCAAGATTTTACTGCACCGCTTCAATTGGCAGCGCCTCTGGACAATCTCGCCAGGAAAGAGCGTAACATCTCTATGTTGGCGACCTGATGGTAAAGCAATCGCAGTCGGGCTCGAAGATGGAACAGTCTCATTGCATGATGTTGAAAATGGAAAGCTGTTGAGAAGCTTGAAATCGCACAGTGTTGCTGTTGTTTCGCTTAATTGGGAGGAGGATGGACAGATGACTAGAGATGAGTATGGCAGCCACTCGGTATATGAAGACCGTACTTCTCGTTTCTTTCCACCTCCTCCAAGAGTTCCACGGATGTCTGGACTGGTATCTGGAGAGACTGGTTTCATGGAGGATAGTGAAGATTCATTTCGAGAGCTGTCAAATTCTTCACAGCAACATTTTAATATTCTTTGCAGTGGAGATAAAGATGGATTCATTTGCTTTAGTATATTTGGGATCTTTCCTATAGGGAAAGTTAACATCAACAACCTTAGTGCTGCTAGTCCACTTGAGGATACTGAAGCTGAGTGTAGACTTCTGAATGCTTCTGTTTACAAGGTAGCTTTGTCAAAAGATCTCTGTCATTTGATAGTCATGTGCTCAGGAGAATCAATTGAAGATAGGGAAGAATCAAAAAATAGGCAGATGGCTGAACCTGATATGCATGGCTTACATTGCATAGTGCTTGATACATCTATATTTTGGAAGAGAAAAAGTGAGCTTCATCAAGTGGCGCAACAAGCTTCTAACATTGAAGAGTTGGCAGAGGTTATTCGGTCATCAATTTCAGTTATGCACAAGGAGTGGTCTGATGCTATGCGCACTTTCCATGACAAGTTTGATTCTCTGTCTAATCTGATCATAGACCATGGACTGGTATCTTCTCCCCAAGAGGAGTTTTTGAGTCTTTTAGGCGGTGCAAGGACTAGTCCAGCAGTTCATCAGTTTCTAGTAAACTCTCTCGCTGAAGTGGGCGTGAAGCGCGTGTCAAAGGCTGTTTGTGGTGCTGGAAAAGAACTGCAGCTTATAATCCTTAATCATCTCCAGCCTGCTGCAGAAATTATTGCATTTAGGATGGGAGAACTAAGAGGCCTTTCACGATGGAGGGCACGCTATCAGGGTATCGGTCTGGATGAGACGCTTATTAATAACGCAACAGAAAAAGCTGGAATGATACTTGTACAAGTTGAACGGTTTATCAGGGTGCTTTCAACTGTAGTGCAGCAGTTTTCGAACTTCTTCAATTGGCTCTTGAAGTGTATAAAGTTGCTCAATTCAGAACCCAGTGATCATCATCTTATACTGTACAATAGTGAGCTCGTAGTTATATTCTTGAAGTTTCTGTATGACCAAGATCCTGTTAAGCAGTTGATGGAAGCGTCAGAAGCTGACGAGAGTATCGAAGTTGGATTGGAAACAGTGCGAAGAGTTAGGGAGTTAGTTCAGTTTGGTGGATTTTCAGATTGTGAGCACCTGCAGAGGACGTTAGCCAAGGAATTTCAGCAGATGGAGACTAGTTTTAAGGAGGCTTTTCAGATGCCCTTTACTACGATTTCAAGAAAAATAGTCTGCAAAGACTCATTGCCACTTTGCTCGCTTCCACCTTTGTCAGCATCTTTGTCAACCAGTATTCCCCTGTCAGTATCATATTATGAGGATGTCTCCCATTCTGTCACTCATCAGACTCATCAACAGAAGTTTCTTGATTACATATCTTTCCATATACCAGATGATTCCTTCTCTGGCATTGCAAACTGTATAGGCATAATGAGGGGAATTATGCAAGATTCGAGCATTATAAAGGAGGGTTATACTTCAGTAGAAGCTGTACTGTTGTGCATCCCTGTTGGTTATTACTGCATCGATCTTTCTTTATATAAGGACAGTCAGATTGTTTTGTTAATAAATGAATCAACTACCACTTCTGAAAGCTCTGGTGATGCCTGTATGATGATTGTGCAAGCAAATGACCTTCCCTTTGTATCTATCACAAGATCCACCAGTTTAAACTATTGGAACTTGCATCAACTGAAGGACTCTGTAGTACATTTGGAAATGGAGAATGAGAAGGTTCGCAGTATACCCCATTCTGTTATTGCTCCCCTGGCAGTTAGCTCATCAAGAGGCGTGGCTTGTGTTTTTGCTGCAAGAAAGCGTGCCTTGGTCTACATTCTGGAGGAAGACGAAGATGAAATTTCTGATAGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC4 ANAPC4_WD40

Protein Analysis

777

Amino Acids

87.31

Weight (kDa)

5.21

Isoelectric Point (pI)

45.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR36-Utp21_1st	PF25171	18 - 111	3.6e-06	WDR36/Utp21 first beta-propeller
Beta-prop_EML_2	PF23414	19 - 119	9.8e-09	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR19_1st	PF23389	21 - 117	1.8e-07	WDR19 first beta-propeller
WD40_WDHD1_1st	PF24817	22 - 114	9.5e-09	WDHD1 first WD40 domain
WD40_Prp19	PF24814	22 - 115	3.5e-08	Prp19 WD40 domain
Beta-prop_WDR35_TULP_N	PF24797	22 - 113	6e-07	WDR35/TULP4 N-terminal
Beta-prop_THOC3	PF25174	23 - 117	8.4e-11	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	24 - 117	5.5e-09	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	26 - 132	6.4e-11	CDC20/Fizzy WD40 domain
WDR55	PF24796	26 - 133	2.4e-06	WDR55
ANAPC4_WD40	PF12894	28 - 113	1.6e-29	Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR3_2nd	PF25172	33 - 117	7.5e-06	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	62 - 117	1.8e-08	WDR3 first beta-propeller domain
ANAPC4	PF12896	265 - 467	2.4e-56	Anaphase-promoting complex, cyclosome, subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21530
fragaria_vesca	FvH4_3g04050 FvH4_3g04050 FvH4_3g04050
malus_domestica	MD10G1303000.v1.1
prunus_persica	Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1
pyrus_communis	pycom10g25560
rosa_chinensis	RchiOBHm_Chr5g0006531
rosa_laevigata	RLG00000031396 RLG00000034652
rosa_multiflora	Rmu_sc0008991.1_g000016
rosa_roxburghii	Rroxscaffold_1G00031790 Rroxscaffold_1G00069530
rosa_rugosa	Rorug04G0421700
rosa_samantha	Rh5AG049400 Rh5BG048700 Rh5CG057000 Rh5DG048000
rosa_wichuraiana	Rw5G004950 Rw5G030980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1148, 1919
AarI	CACCTGC	1 cut(s)	1602
AasI	GACNNNNNNGTC	1 cut(s)	56
Acc16I	TGCGCA	1 cut(s)	941
Acc36I	ACCTGC	1 cut(s)	1602
AccB7I	CCANNNNNTGG	1 cut(s)	994
AccI	GTMKAC	3 cut(s)	652, 2200, 2286
AccII	CGCG	3 cut(s)	24, 80, 1104
AciI	CCGC	3 cut(s)	80, 145, 1035
AclWI	GGATC	3 cut(s)	584, 1469, 2109
AcoI	YGGCCR	1 cut(s)	108
AcsI	RAATTY	3 cut(s)	502, 1616, 2313
AcuI	CTGAAG	4 cut(s)	660, 1107, 1920, 2171
AfaI	GTAC	5 cut(s)	394, 1302, 1427, 1950, 2166
AfiI	CCNNNNNNNGG	1 cut(s)	994
AflIII	ACRYGT	1 cut(s)	22
AhlI	ACTAGT	2 cut(s)	1046, 1634
AjnI	CCWGG	2 cut(s)	178, 2223
Alw21I	GWGCWC	3 cut(s)	722, 1440, 1593
Alw26I	GTCTC	5 cut(s)	259, 449, 1250, 1625, 1786
AlwI	GGATC	3 cut(s)	584, 1469, 2109
AlwNI	CAGNNNCTG	1 cut(s)	1508
Ama87I	CYCGRG	1 cut(s)	92
AoxI	GGCC	2 cut(s)	108, 1210
ApeKI	GCWGC	7 cut(s)	157, 369, 617, 1141, 1172, 1342, 2264
ApoI	RAATTY	3 cut(s)	502, 1616, 2313
ArsI	GACNNNNNNTTYG	2 cut(s)	2081, 2113
AseI	ATTAAT	1 cut(s)	1266
Asp700I	GAANNNNTTC	1 cut(s)	1358
AspLEI	GCGC	4 cut(s)	162, 856, 942, 1104
AsuHPI	GGTGA	1 cut(s)	2069
AsuII	TTCGAA	1 cut(s)	1352
AvaI	CYCGRG	1 cut(s)	92
BaeGI	GKGCMC	1 cut(s)	1231
BaeI	ACNNNNGTAYC	2 cut(s)	1501, 1534
BalI	TGGCCA	1 cut(s)	110
BanII	GRGCYC	2 cut(s)	240, 1440
BbsI	GAAGAC	2 cut(s)	393, 2307
Bbv12I	GWGCWC	3 cut(s)	722, 1440, 1593
BbvI	GCAGC	7 cut(s)	169, 381, 604, 1153, 1159, 1354, 2251
BccI	CCATC	9 cut(s)	209, 239, 335, 542, 760, 1189, 1215, 1486, 1621
BciT130I	CCWGG	2 cut(s)	180, 2225
BciVI	GTATCC	1 cut(s)	628
BclI	TGATCA	2 cut(s)	978, 1408
BcoDI	GTCTC	5 cut(s)	259, 449, 1250, 1625, 1786
BcuI	ACTAGT	2 cut(s)	1046, 1634
BfaI	CTAG	5 cut(s)	354, 621, 1047, 1070, 1635
BfmI	CTRYAG	6 cut(s)	585, 1139, 1173, 1335, 1595, 2160
BfoI	RGCGCY	1 cut(s)	163
BfuAI	ACCTGC	1 cut(s)	1602
BfuI	GTATCC	1 cut(s)	628
BglII	AGATCT	1 cut(s)	694
BisI	GCNGC	7 cut(s)	158, 370, 618, 1142, 1173, 1343, 2265
BlsI	GCNGC	7 cut(s)	159, 371, 619, 1143, 1174, 1344, 2266
Bme1390I	CCNGG	2 cut(s)	180, 2225
BmeT110I	CYCGRG	1 cut(s)	92
BmrFI	CCNGG	2 cut(s)	180, 2225
BmrI	ACTGGG	1 cut(s)	1398
BmsI	GCATC	7 cut(s)	922, 1647, 1742, 1968, 1989, 2050, 2152
BmuI	ACTGGG	1 cut(s)	1398
BpiI	GAAGAC	2 cut(s)	393, 2307
BplI	GAGNNNNNCTC	2 cut(s)	1766, 1798
BpmI	CTGGAG	4 cut(s)	26, 471, 1148, 2315
Bpu10I	CCTNAGC	1 cut(s)	721
Bpu14I	TTCGAA	1 cut(s)	1352
BpuEI	CTTGAG	1 cut(s)	650
Bsa29I	ATCGAT	1 cut(s)	1983
BsaBI	GATNNNNATC	2 cut(s)	74, 1413
BsaJI	CCNNGG	6 cut(s)	111, 428, 988, 1611, 2223, 2280
Bsc4I	CCNNNNNNNGG	1 cut(s)	994
Bse1I	ACTGG	9 cut(s)	43, 56, 111, 447, 463, 999, 1404, 1746, 2121
Bse3DI	GCAATG	4 cut(s)	257, 793, 1700, 1866
Bse8I	GATNNNNATC	2 cut(s)	74, 1413
BseBI	CCWGG	2 cut(s)	180, 2225
BseCI	ATCGAT	1 cut(s)	1983
BseDI	CCNNGG	6 cut(s)	111, 428, 988, 1611, 2223, 2280
BseGI	GGATG	6 cut(s)	346, 438, 1200, 1258, 1783, 1959
BseJI	GATNNNNATC	2 cut(s)	74, 1413
BseLI	CCNNNNNNNGG	1 cut(s)	994
BseMI	GCAATG	4 cut(s)	257, 793, 1700, 1866
BseMII	CTCAG	3 cut(s)	111, 636, 735
BseNI	ACTGG	9 cut(s)	43, 56, 111, 447, 463, 999, 1404, 1746, 2121
BseRI	GAGGAG	3 cut(s)	350, 405, 1028
BseSI	GKGCMC	1 cut(s)	1231
BseXI	GCAGC	7 cut(s)	169, 381, 604, 1153, 1159, 1354, 2251
BsgI	GTGCAG	2 cut(s)	125, 1361
Bsh1236I	CGCG	3 cut(s)	24, 80, 1104
BshFI	GGCC	2 cut(s)	110, 1212
BshVI	ATCGAT	1 cut(s)	1983
BsiHKAI	GWGCWC	3 cut(s)	722, 1440, 1593
BsiHKCI	CYCGRG	1 cut(s)	92
BslI	CCNNNNNNNGG	1 cut(s)	994
BsmAI	GTCTC	5 cut(s)	259, 449, 1250, 1625, 1786
BsmBI	CGTCTC	1 cut(s)	1250
BsmI	GAATGC	1 cut(s)	667
BsnI	GGCC	2 cut(s)	110, 1212
BsoBI	CYCGRG	1 cut(s)	92
Bsp119I	TTCGAA	1 cut(s)	1352
Bsp1286I	GDGCHC	5 cut(s)	240, 722, 1231, 1440, 1593
Bsp1407I	TGTACA	2 cut(s)	1300, 1425
Bsp143I	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
Bsp19I	CCATGG	2 cut(s)	111, 988
BspACI	CCGC	3 cut(s)	80, 145, 1035
BspANI	GGCC	2 cut(s)	110, 1212
BspCNI	CTCAG	3 cut(s)	112, 637, 734
BspDI	ATCGAT	1 cut(s)	1983
BspFNI	CGCG	3 cut(s)	24, 80, 1104
BspMAI	CTGCAG	3 cut(s)	1143, 1177, 1599
BspMI	ACCTGC	1 cut(s)	1602
BspPI	GGATC	3 cut(s)	584, 1469, 2109
BspT104I	TTCGAA	1 cut(s)	1352
BsrDI	GCAATG	4 cut(s)	257, 793, 1700, 1866
BsrGI	TGTACA	2 cut(s)	1300, 1425
BsrI	ACTGG	9 cut(s)	43, 56, 111, 447, 463, 999, 1404, 1746, 2121
BssECI	CCNNGG	6 cut(s)	111, 428, 988, 1611, 2223, 2280
BssMI	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
BssNAI	GTATAC	1 cut(s)	2201
BssT1I	CCWWGG	4 cut(s)	111, 988, 1611, 2280
Bst1107I	GTATAC	1 cut(s)	2201
Bst2UI	CCWGG	2 cut(s)	180, 2225
Bst6I	CTCTTC	3 cut(s)	821, 870, 1540
BstAUI	TGTACA	2 cut(s)	1300, 1425
BstBI	TTCGAA	1 cut(s)	1352
BstC8I	GCNNGC	5 cut(s)	1170, 1231, 1715, 2082, 2277
BstDEI	CTNAG	5 cut(s)	120, 611, 645, 721, 1205
BstDSI	CCRYGG	3 cut(s)	111, 428, 988
BstF5I	GGATG	6 cut(s)	346, 438, 1200, 1258, 1783, 1959
BstFNI	CGCG	3 cut(s)	24, 80, 1104
BstH2I	RGCGCY	1 cut(s)	163
BstHHI	GCGC	4 cut(s)	162, 856, 942, 1104
BstKTI	GATC	7 cut(s)	579, 697, 981, 1411, 1477, 1987, 2117
BstMAI	GTCTC	5 cut(s)	259, 449, 1250, 1625, 1786
BstMBI	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
BstMWI	GCNNNNNNNGC	5 cut(s)	795, 860, 1101, 1505, 2225
BstNI	CCWGG	2 cut(s)	180, 2225
BstSCI	CCNGG	2 cut(s)	178, 2223
BstSFI	CTRYAG	6 cut(s)	585, 1139, 1173, 1335, 1595, 2160
BstSLI	GKGCMC	1 cut(s)	1231
BstUI	CGCG	3 cut(s)	24, 80, 1104
BstV1I	GCAGC	7 cut(s)	169, 381, 604, 1153, 1159, 1354, 2251
BstV2I	GAAGAC	2 cut(s)	393, 2307
BstX2I	RGATCY	4 cut(s)	576, 694, 1474, 2114
BstYI	RGATCY	4 cut(s)	576, 694, 1474, 2114
BstZ17I	GTATAC	1 cut(s)	2201
Bsu15I	ATCGAT	1 cut(s)	1983
BsuI	GTATCC	1 cut(s)	628
BsuRI	GGCC	2 cut(s)	110, 1212
BsuTUI	ATCGAT	1 cut(s)	1983
BtgI	CCRYGG	3 cut(s)	111, 428, 988
BtsCI	GGATG	6 cut(s)	346, 438, 1200, 1258, 1783, 1959
BtsI	GCAGTG	1 cut(s)	541
BtsIMutI	CAGTG	4 cut(s)	313, 541, 1411, 1545
BveI	ACCTGC	1 cut(s)	1602
Cac8I	GCNNGC	5 cut(s)	1170, 1231, 1715, 2082, 2277
CaiI	CAGNNNCTG	1 cut(s)	1508
CfoI	GCGC	4 cut(s)	162, 856, 942, 1104
ClaI	ATCGAT	1 cut(s)	1983
CseI	GACGC	3 cut(s)	13, 1267, 1488
Csp6I	GTAC	5 cut(s)	393, 1301, 1426, 1949, 2165
CspCI	CAANNNNNGTGG	2 cut(s)	2229, 2264
CviAII	CATG	7 cut(s)	112, 263, 466, 715, 785, 950, 989
CviQI	GTAC	5 cut(s)	393, 1301, 1426, 1949, 2165
DdeI	CTNAG	5 cut(s)	120, 611, 645, 721, 1205
DpnI	GATC	7 cut(s)	578, 696, 980, 1410, 1476, 1986, 2116
DpnII	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
DraI	TTTAAA	1 cut(s)	2127
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	1 cut(s)	108
Eam1104I	CTCTTC	3 cut(s)	821, 870, 1540
EarI	CTCTTC	3 cut(s)	821, 870, 1540
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	4 cut(s)	111, 988, 1611, 2280
Eco147I	AGGCCT	1 cut(s)	1212
Eco24I	GRGCYC	2 cut(s)	240, 1440
Eco53kI	GAGCTC	1 cut(s)	1438
Eco57I	CTGAAG	4 cut(s)	660, 1107, 1920, 2171
Eco88I	CYCGRG	1 cut(s)	92
EcoICRI	GAGCTC	1 cut(s)	1438
EcoRII	CCWGG	2 cut(s)	178, 2223
EcoT14I	CCWWGG	4 cut(s)	111, 988, 1611, 2280
EcoT22I	ATGCAT	1 cut(s)	786
EcoT38I	GRGCYC	2 cut(s)	240, 1440
ErhI	CCWWGG	4 cut(s)	111, 988, 1611, 2280
Esp3I	CGTCTC	1 cut(s)	1250
FaeI	CATG	7 cut(s)	115, 266, 469, 718, 788, 953, 992
FalI	AAGNNNNNCTT	2 cut(s)	2264, 2296
FatI	CATG	7 cut(s)	111, 262, 465, 714, 784, 949, 988
FbaI	TGATCA	2 cut(s)	978, 1408
FblI	GTMKAC	3 cut(s)	652, 2200, 2286
Fnu4HI	GCNGC	7 cut(s)	158, 370, 618, 1142, 1173, 1343, 2265
FokI	GGATG	6 cut(s)	353, 445, 1207, 1265, 1790, 1946
FriOI	GRGCYC	2 cut(s)	240, 1440
Fsp4HI	GCNGC	7 cut(s)	158, 370, 618, 1142, 1173, 1343, 2265
FspAI	RTGCGCAY	1 cut(s)	941
FspBI	CTAG	5 cut(s)	354, 621, 1047, 1070, 1635
FspI	TGCGCA	1 cut(s)	941
GlaI	GCGC	4 cut(s)	161, 855, 941, 1103
GluI	GCNGC	7 cut(s)	158, 370, 618, 1142, 1173, 1343, 2265
GsuI	CTGGAG	4 cut(s)	26, 471, 1148, 2315
HaeII	RGCGCY	1 cut(s)	163
HaeIII	GGCC	2 cut(s)	110, 1212
HgaI	GACGC	3 cut(s)	13, 1267, 1488
HhaI	GCGC	4 cut(s)	162, 856, 942, 1104
Hin1II	CATG	7 cut(s)	115, 266, 469, 718, 788, 953, 992
Hin6I	GCGC	4 cut(s)	160, 854, 940, 1102
HinP1I	GCGC	4 cut(s)	160, 854, 940, 1102
HincII	GTYRAC	2 cut(s)	598, 1743
HindII	GTYRAC	2 cut(s)	598, 1743
HindIII	AAGCTT	2 cut(s)	292, 861
HpaI	GTTAAC	1 cut(s)	598
HphI	GGTGA	1 cut(s)	2069
Hpy166II	GTNNAC	8 cut(s)	598, 626, 653, 673, 1075, 1743, 2201, 2287
Hpy8I	GTNNAC	8 cut(s)	598, 626, 653, 673, 1075, 1743, 2201, 2287
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	6 cut(s)	43, 91, 1867, 2102, 2146, 2182
HpyCH4IV	ACGT	1 cut(s)	1604
HpyF10VI	GCNNNNNNNGC	5 cut(s)	795, 860, 1101, 1505, 2225
HpyF3I	CTNAG	5 cut(s)	120, 611, 645, 721, 1205
HpySE526I	ACGT	1 cut(s)	1604
Hsp92II	CATG	7 cut(s)	115, 266, 469, 718, 788, 953, 992
HspAI	GCGC	4 cut(s)	160, 854, 940, 1102
Ksp22I	TGATCA	2 cut(s)	978, 1408
KspAI	GTTAAC	1 cut(s)	598
Kzo9I	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
LmnI	GCTCC	2 cut(s)	45, 2224
Lsp1109I	GCAGC	7 cut(s)	169, 381, 604, 1153, 1159, 1354, 2251
LweI	GCATC	7 cut(s)	922, 1647, 1742, 1968, 1989, 2050, 2152
MaeI	CTAG	5 cut(s)	354, 621, 1047, 1070, 1635
MaeII	ACGT	1 cut(s)	1604
MaeIII	GTNAC	4 cut(s)	25, 115, 190, 1792
MalI	GATC	7 cut(s)	578, 696, 980, 1410, 1476, 1986, 2116
MboI	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
MfeI	CAATTG	3 cut(s)	151, 732, 1363
MflI	RGATCY	4 cut(s)	576, 694, 1474, 2114
MhlI	GDGCHC	5 cut(s)	240, 722, 1231, 1440, 1593
MlsI	TGGCCA	1 cut(s)	110
MluI	ACGCGT	1 cut(s)	22
MluNI	TGGCCA	1 cut(s)	110
MlyI	GAGTC	5 cut(s)	119, 1033, 1691, 1798, 2150
MmeI	TCCRAC	1 cut(s)	1507
Mox20I	TGGCCA	1 cut(s)	110
Mph1103I	ATGCAT	1 cut(s)	786
MroXI	GAANNNNTTC	1 cut(s)	1358
MscI	TGGCCA	1 cut(s)	110
MslI	CAYNNNNRTG	1 cut(s)	199
Msp20I	TGGCCA	1 cut(s)	110
MspR9I	CCNGG	2 cut(s)	180, 2225
MssI	GTTTAAAC	1 cut(s)	2127
MunI	CAATTG	3 cut(s)	151, 732, 1363
Mva1269I	GAATGC	1 cut(s)	667
MvaI	CCWGG	2 cut(s)	180, 2225
MvnI	CGCG	3 cut(s)	24, 80, 1104
MwoI	GCNNNNNNNGC	5 cut(s)	795, 860, 1101, 1505, 2225
NcoI	CCATGG	2 cut(s)	111, 988
NdeII	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
NlaIII	CATG	7 cut(s)	115, 266, 469, 718, 788, 953, 992
NmuCI	GTSAC	2 cut(s)	25, 1792
NsbI	TGCGCA	1 cut(s)	941
NsiI	ATGCAT	1 cut(s)	786
NspV	TTCGAA	1 cut(s)	1352
PaqCI	CACCTGC	1 cut(s)	1602
PceI	AGGCCT	1 cut(s)	1212
PcsI	WCGNNNNNNNCGW	1 cut(s)	1518
PctI	GAATGC	1 cut(s)	667
PdmI	GAANNNNTTC	1 cut(s)	1358
PfeI	GAWTC	9 cut(s)	88, 482, 552, 728, 749, 962, 1853, 1907, 2030
PflMI	CCANNNNNTGG	1 cut(s)	994
PkrI	GCNGC	7 cut(s)	159, 371, 619, 1143, 1174, 1344, 2266
PleI	GAGTC	5 cut(s)	119, 1032, 1691, 1798, 2150
PmeI	GTTTAAAC	1 cut(s)	2127
PpsI	GAGTC	5 cut(s)	119, 1032, 1691, 1798, 2150
PshBI	ATTAAT	1 cut(s)	1266
PsiI	TTATAA	2 cut(s)	1148, 1919
Psp124BI	GAGCTC	1 cut(s)	1440
Psp6I	CCWGG	2 cut(s)	178, 2223
PspGI	CCWGG	2 cut(s)	178, 2223
PstI	CTGCAG	3 cut(s)	1143, 1177, 1599
PstNI	CAGNNNCTG	1 cut(s)	1508
PsuI	RGATCY	4 cut(s)	576, 694, 1474, 2114
RsaI	GTAC	5 cut(s)	394, 1302, 1427, 1950, 2166
RsaNI	GTAC	5 cut(s)	393, 1301, 1426, 1949, 2165
RseI	CAYNNNNRTG	1 cut(s)	199
SacI	GAGCTC	1 cut(s)	1440
SatI	GCNGC	7 cut(s)	158, 370, 618, 1142, 1173, 1343, 2265
Sau3AI	GATC	7 cut(s)	576, 694, 978, 1408, 1474, 1984, 2114
SchI	GAGTC	5 cut(s)	119, 1033, 1691, 1798, 2150
ScrFI	CCNGG	2 cut(s)	180, 2225
SduI	GDGCHC	5 cut(s)	240, 722, 1231, 1440, 1593
SfaNI	GCATC	7 cut(s)	922, 1647, 1742, 1968, 1989, 2050, 2152
SfcI	CTRYAG	6 cut(s)	585, 1139, 1173, 1335, 1595, 2160
SfuI	TTCGAA	1 cut(s)	1352
SmiMI	CAYNNNNRTG	1 cut(s)	199
SmlI	CTYRAG	1 cut(s)	629
SmoI	CTYRAG	1 cut(s)	629
SpeI	ACTAGT	2 cut(s)	1046, 1634
SseBI	AGGCCT	1 cut(s)	1212
SsiI	CCGC	3 cut(s)	80, 145, 1035
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	5 cut(s)	354, 621, 1047, 1070, 1635
SstI	GAGCTC	1 cut(s)	1440
StuI	AGGCCT	1 cut(s)	1212
StyD4I	CCNGG	2 cut(s)	178, 2223
StyI	CCWWGG	4 cut(s)	111, 988, 1611, 2280
TaiI	ACGT	1 cut(s)	1607
TaqI	TCGA	7 cut(s)	48, 240, 490, 1352, 1521, 1910, 1983
TaqII	GACCGA	2 cut(s)	885, 1235
TatI	WGTACW	4 cut(s)	1300, 1425, 1948, 2164
TfiI	GAWTC	9 cut(s)	88, 482, 552, 728, 749, 962, 1853, 1907, 2030
TscAI	CASTG	4 cut(s)	313, 541, 1411, 1545
TseFI	GTSAC	2 cut(s)	25, 1792
TseI	GCWGC	7 cut(s)	157, 369, 617, 1141, 1172, 1342, 2264
Tsp45I	GTSAC	2 cut(s)	25, 1792
TspDTI	ATGAA	8 cut(s)	399, 454, 474, 544, 833, 1049, 2043, 2325
TspGWI	ACGGA	1 cut(s)	445
TspRI	CASTG	4 cut(s)	313, 541, 1411, 1545
Van91I	CCANNNNNTGG	1 cut(s)	994
VspI	ATTAAT	1 cut(s)	1266
XapI	RAATTY	3 cut(s)	502, 1616, 2313
XmiI	GTMKAC	3 cut(s)	652, 2200, 2286
XmnI	GAANNNNTTC	1 cut(s)	1358
XspI	CTAG	5 cut(s)	354, 621, 1047, 1070, 1635
Zsp2I	ATGCAT	1 cut(s)	786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.