Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007288

Physical Location & Seq

Genomic Coordinates Reverse (-)

50024439 .. 50030543

Gene Structure 6105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G030980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGCAAACCGACGAAGAAGAACAACGCGTCACTCCATTCCAGCTCCAGTTCGACAAGCCAGTCGCTTCGCAGATTAAGATCGCGGAGTCGAATCCCGAGAAGAATTTACTCGCCATGGTAACTGAAGACTCCAAGATATTACTGCACCGCTTCAATTGGCAGAGGCTCTGGACGATCTCCCCAGGGAAGAGCATAACGTCTTTGTGTTGGAGACCTGATGGTAAAGCAATCCCCGTCCGGCTCGAAGATGGAACAGTTTCATTGCATGATGTTGAAGCAGAATGGAAAGTTGTTGAGGAGCTTGAAATGCATACTGTGGCTGTTGTTTCTCTTAATTGGGAGGAGGATGGACAGATGACTAGAGATGAGTATGGCAGCCACTCGGTATATGAAGACCGTACTTCTCGTTTCTTTCCACCACCTCCAAGAGTTCCGCGAATGCCTGGACTGGTATCTGGAGAGACCGGTTTCATGGATGATAGTGAAGATTCATTCCGAGAGCTGTCAAATTCTTCACAGCAGCGTTTTAATATCCTCTGCAGTGGAGATAAAGATGGATTCATTTGCTTTAGTATTTTTGGGATCTTTCCGATAGGGAAAATTAACATCCACAACTTTGGTGCTGCTAGTCCACTTAAGGATACTAAACCTGAGTGTAGACTTCTGAATGCTTCTGTTTACAAGGTTGCTTTGTCAAAAGATCTTTGTCATTTGATAGTCGTGTGTTCAGGAGAATTAGTTGAAGATAGGGAAGAATCAGAAAACAGGCAGATGACTGAACCTGGTATGCATGACTTACATTGCATAGTGCTTGATACATTTATATTTTGGAAGAGAAAAAGTGAGCTTCATCAAGTGGCGCAACAAGCTTCTAACATTGAGGAATTGGCAGAGGAGTGGTGTGATGCTATGCACACTTTTCATGACAAGTTTGATTCTCTGTCTAATCTGATCATAGACCATGGACTCCAGTCCTCTCACCAAGAGGAGTTTTTGAGTCTTTTAGGTGGTGCAAGGACTAGTCCAGCAGTTCATCAGTTTCTAGTTAACTCTCTCGGTGAAGTGGGTGTGAAGCGCGTGTCAAAGGCTGTTTGTGGTGCTGGGAAAGAACTGCAGCTTATAATCCTAAATCATCTCCAGCCTGCTGCAGAAATTATTGCATTCAGGATGGGAGAACTAAGGGGCCTTTCACGATGGAGAGCACGCTATCAGGGCATCGGTTTGGATGAGTCGCTTATCAATAATGCAACAGAAAAAGCTGGAATGATACTTGTACAAGTTGAATGGTTTATCAGGGTGCTTTCATCTGTGGTGCAGCAGTTTTCGAACTTCTTCAATTGGCTCTTGAAGTGTATACAGTTACTCAATTCAGAACCCAGTGATCATCATCTTATACTGTACAATAGTGAACTTCTTGTTATATTCTTGAAGTTTCTATATGACCAATATCCTGTTAAGCAGGTGCTGGAGGCGTCGGAAGCTGATGAGAGTATAGAAGTCTATCACTCAGAGGCCATCTGTTTTGGAACTGAAATTTGCTTCCGTTATTTCAGGGAAACAGTGCAGAGAGTTAGAGAATTAGTTCAGTTTGGGGGATTTTCAGATTGTGAGCACCTGCAGAGGACGTTAGCCAAGGAATTTCAACAGATGGAGTCTAGGTATGCAGAGTCTGAAGATTCATTGCCGCTTTGCCCACTTCCACCTTTCTCAGCATCTTTGTTTACCAGTATTCCTATGTCAGTATCATATTATGAGGATGCCTCCCATTCCATCCCTCATCAGACTCTTCAACATATTGAGGGGATTATGCATGACTCAAGCATTGTAAAGAGGGGTTATACATCAGTAGAAGCTGCACTGTTGTGCATCCCTGTTGGTTATTACTTTGTGGATCTTTCTTTATATAAGGATAGTCAGATCATTTTATTATTAAATGAAACAACTACCACTTCTGAAAGCTCTGGTGATGCCTGTATGATGATTGTGCAAGCAAATGACCTTCCATTTGTATCTATCACAAGATCCACTAGTCGAAACTATTGGAACTTGTATCAACTGAAGGACTCTGTTGTTCACTCGCAAATGGAGAACAAGAAGGTTCGCAGTATACCCCATTCTGTTATTGCTCCTCTAGCAGTTAGCCCATCAAGAGGTGTGGCTTGTGTTTTTGCTGCAAGAAACCGTGCCTTGGTCTACATTCTGGAGGAAGATGAAGATGAAGTTTCTGATTCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC4 ANAPC4_WD40

Protein Analysis

745

Amino Acids

84.54

Weight (kDa)

5.06

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_EML_2	PF23414	21 - 121	1.1e-06	Echinoderm microtubule-associated protein second beta-propeller
ANAPC4_WD40	PF12894	31 - 115	2.6e-21	Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_THOC3	PF25174	31 - 120	7.2e-06	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	35 - 133	8.3e-06	CDC20/Fizzy WD40 domain
ANAPC4	PF12896	267 - 458	4.9e-46	Anaphase-promoting complex, cyclosome, subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21530
fragaria_vesca	FvH4_3g04050 FvH4_3g04050 FvH4_3g04050
malus_domestica	MD10G1303000.v1.1
prunus_persica	Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1
pyrus_communis	pycom10g25560
rosa_chinensis	RchiOBHm_Chr5g0006531
rosa_laevigata	RLG00000031396 RLG00000034652
rosa_multiflora	Rmu_sc0008991.1_g000016
rosa_roxburghii	Rroxscaffold_1G00031790 Rroxscaffold_1G00069530
rosa_rugosa	Rorug04G0421700
rosa_samantha	Rh5AG049400 Rh5BG048700 Rh5CG057000 Rh5DG048000
rosa_wichuraiana	Rw5G004950 Rw5G030980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
AarI	CACCTGC	2 cut(s)	1450, 1623
AasI	GACNNNNNNGTC	1 cut(s)	59
Acc36I	ACCTGC	2 cut(s)	1450, 1623
AccI	GTMKAC	4 cut(s)	658, 1354, 2107, 2193
AccII	CGCG	4 cut(s)	27, 83, 436, 1077
AciI	CCGC	4 cut(s)	83, 148, 434, 1685
AclWI	GGATC	3 cut(s)	590, 1899, 2016
AcsI	RAATTY	4 cut(s)	103, 508, 1533, 1637
AcuI	CTGAAG	3 cut(s)	144, 1692, 2078
AcyI	GRCGYC	1 cut(s)	1472
AfaI	GTAC	3 cut(s)	400, 1275, 1400
AfiI	CCNNNNNNNGG	2 cut(s)	2150, 2188
AflII	CTTAAG	1 cut(s)	635
AflIII	ACRYGT	1 cut(s)	25
AgeI	ACCGGT	1 cut(s)	464
AhlI	ACTAGT	2 cut(s)	1019, 2027
AjnI	CCWGG	3 cut(s)	181, 442, 781
AleI	CACNNNNGTG	1 cut(s)	1861
Alw21I	GWGCWC	2 cut(s)	1204, 1614
Alw26I	GTCTC	2 cut(s)	205, 455
AlwI	GGATC	3 cut(s)	590, 1899, 2016
AlwNI	CAGNNNCTG	2 cut(s)	1465, 1670
Ama87I	CYCGRG	1 cut(s)	95
AoxI	GGCC	2 cut(s)	1183, 1512
ApeKI	GCWGC	8 cut(s)	375, 520, 623, 1114, 1145, 1315, 1853, 2171
ApoI	RAATTY	4 cut(s)	103, 508, 1533, 1637
ArsI	GACNNNNNNTTYG	2 cut(s)	1988, 2020
AsiGI	ACCGGT	1 cut(s)	464
Asp700I	GAANNNNTTC	3 cut(s)	256, 1331, 1581
AspLEI	GCGC	2 cut(s)	862, 1077
AspS9I	GGNCC	1 cut(s)	1183
AsuHPI	GGTGA	3 cut(s)	971, 1070, 1976
AsuII	TTCGAA	1 cut(s)	1325
AvaI	CYCGRG	1 cut(s)	95
BbsI	GAAGAC	2 cut(s)	132, 399
Bbv12I	GWGCWC	2 cut(s)	1204, 1614
BbvI	GCAGC	8 cut(s)	387, 532, 610, 1126, 1132, 1327, 1840, 2158
BciT130I	CCWGG	3 cut(s)	183, 444, 783
BciVI	GTATCC	1 cut(s)	634
BclI	TGATCA	2 cut(s)	951, 1381
BcoDI	GTCTC	2 cut(s)	205, 455
BcuI	ACTAGT	2 cut(s)	1019, 2027
BfaI	CTAG	7 cut(s)	360, 627, 1020, 1043, 1656, 2028, 2132
BfmI	CTRYAG	4 cut(s)	538, 1112, 1146, 1616
BfrI	CTTAAG	1 cut(s)	635
BfuAI	ACCTGC	2 cut(s)	1450, 1623
BfuI	GTATCC	1 cut(s)	634
BglII	AGATCT	1 cut(s)	700
BisI	GCNGC	9 cut(s)	376, 521, 624, 1115, 1146, 1316, 1685, 1854, 2172
BlsI	GCNGC	9 cut(s)	377, 522, 625, 1116, 1147, 1317, 1686, 1855, 2173
Bme1390I	CCNGG	3 cut(s)	183, 444, 783
BmeT110I	CYCGRG	1 cut(s)	95
BmgT120I	GGNCC	1 cut(s)	1183
BmiI	GGNNCC	1 cut(s)	1184
BmrFI	CCNGG	3 cut(s)	183, 444, 783
BmrI	ACTGGG	1 cut(s)	1371
BmsI	GCATC	6 cut(s)	895, 1224, 1721, 1747, 1875, 1957
BmuI	ACTGGG	1 cut(s)	1371
BoxI	GACNNNNGTC	1 cut(s)	970
BpiI	GAAGAC	2 cut(s)	132, 399
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
BpmI	CTGGAG	6 cut(s)	29, 477, 953, 1121, 1487, 2222
Bpu14I	TTCGAA	1 cut(s)	1325
BpuEI	CTTGAG	1 cut(s)	1801
BsaBI	GATNNNNATC	2 cut(s)	77, 1386
BsaHI	GRCGYC	1 cut(s)	1472
BsaI	GGTCTC	2 cut(s)	205, 455
BsaJI	CCNNGG	6 cut(s)	114, 181, 182, 961, 1632, 2187
BsaWI	WCCGGW	1 cut(s)	464
BsaXI	ACNNNNNCTCC	4 cut(s)	723, 753, 1643, 1673
Bsc4I	CCNNNNNNNGG	2 cut(s)	2150, 2188
Bse118I	RCCGGY	1 cut(s)	464
Bse1I	ACTGG	6 cut(s)	46, 59, 453, 970, 1377, 1725
Bse3DI	GCAATG	3 cut(s)	260, 799, 1679
Bse8I	GATNNNNATC	2 cut(s)	77, 1386
BseBI	CCWGG	3 cut(s)	183, 444, 783
BseDI	CCNNGG	6 cut(s)	114, 181, 182, 961, 1632, 2187
BseGI	GGATG	8 cut(s)	352, 481, 606, 1173, 1231, 1762, 1770, 1866
BseJI	GATNNNNATC	2 cut(s)	77, 1386
BseLI	CCNNNNNNNGG	2 cut(s)	2150, 2188
BseMI	GCAATG	3 cut(s)	260, 799, 1679
BseMII	CTCAG	3 cut(s)	642, 1521, 1722
BseNI	ACTGG	6 cut(s)	46, 59, 453, 970, 1377, 1725
BseRI	GAGGAG	5 cut(s)	311, 356, 908, 1001, 2118
BseXI	GCAGC	8 cut(s)	387, 532, 610, 1126, 1132, 1327, 1840, 2158
BseYI	CCCAGC	1 cut(s)	1100
BsgI	GTGCAG	4 cut(s)	128, 1334, 1583, 1839
Bsh1236I	CGCG	4 cut(s)	27, 83, 436, 1077
BshFI	GGCC	2 cut(s)	1185, 1514
BshTI	ACCGGT	1 cut(s)	464
BsiHKAI	GWGCWC	2 cut(s)	1204, 1614
BsiHKCI	CYCGRG	1 cut(s)	95
BsiSI	CCGG	2 cut(s)	238, 465
BslI	CCNNNNNNNGG	2 cut(s)	2150, 2188
BsmAI	GTCTC	2 cut(s)	205, 455
BsmI	GAATGC	3 cut(s)	444, 673, 1160
BsnI	GGCC	2 cut(s)	1185, 1514
Bso31I	GGTCTC	2 cut(s)	205, 455
BsoBI	CYCGRG	1 cut(s)	95
Bsp119I	TTCGAA	1 cut(s)	1325
Bsp1286I	GDGCHC	2 cut(s)	1204, 1614
Bsp1407I	TGTACA	2 cut(s)	1273, 1398
Bsp143I	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
Bsp19I	CCATGG	2 cut(s)	114, 961
BspACI	CCGC	4 cut(s)	83, 148, 434, 1685
BspANI	GGCC	2 cut(s)	1185, 1514
BspCNI	CTCAG	3 cut(s)	643, 1520, 1721
BspFNI	CGCG	4 cut(s)	27, 83, 436, 1077
BspHI	TCATGA	1 cut(s)	922
BspLI	GGNNCC	1 cut(s)	1184
BspMAI	CTGCAG	4 cut(s)	542, 1116, 1150, 1620
BspMI	ACCTGC	2 cut(s)	1450, 1623
BspPI	GGATC	3 cut(s)	590, 1899, 2016
BspQI	GCTCTTC	1 cut(s)	182
BspT104I	TTCGAA	1 cut(s)	1325
BspTI	CTTAAG	1 cut(s)	635
BspTNI	GGTCTC	2 cut(s)	205, 455
BsrDI	GCAATG	3 cut(s)	260, 799, 1679
BsrFI	RCCGGY	1 cut(s)	464
BsrGI	TGTACA	2 cut(s)	1273, 1398
BsrI	ACTGG	6 cut(s)	46, 59, 453, 970, 1377, 1725
BssAI	RCCGGY	1 cut(s)	464
BssECI	CCNNGG	6 cut(s)	114, 181, 182, 961, 1632, 2187
BssMI	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
BssNAI	GTATAC	2 cut(s)	1355, 2108
BssNI	GRCGYC	1 cut(s)	1472
BssT1I	CCWWGG	4 cut(s)	114, 961, 1632, 2187
Bst1107I	GTATAC	2 cut(s)	1355, 2108
Bst2UI	CCWGG	3 cut(s)	183, 444, 783
Bst4CI	ACNGT	8 cut(s)	256, 316, 398, 1359, 1398, 1561, 1860, 2183
Bst6I	CTCTTC	3 cut(s)	182, 827, 1791
BstACI	GRCGYC	1 cut(s)	1472
BstAFI	CTTAAG	1 cut(s)	635
BstAUI	TGTACA	2 cut(s)	1273, 1398
BstBI	TTCGAA	1 cut(s)	1325
BstC8I	GCNNGC	3 cut(s)	1143, 1204, 1989
BstDEI	CTNAG	4 cut(s)	651, 1178, 1507, 1708
BstDSI	CCRYGG	2 cut(s)	114, 961
BstF5I	GGATG	8 cut(s)	352, 481, 606, 1173, 1231, 1762, 1770, 1866
BstFNI	CGCG	4 cut(s)	27, 83, 436, 1077
BstHHI	GCGC	2 cut(s)	862, 1077
BstKTI	GATC	9 cut(s)	81, 177, 585, 703, 954, 1384, 1894, 1920, 2024
BstMAI	GTCTC	2 cut(s)	205, 455
BstMBI	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
BstMWI	GCNNNNNNNGC	5 cut(s)	307, 866, 1212, 1478, 2132
BstNI	CCWGG	3 cut(s)	183, 444, 783
BstPAI	GACNNNNGTC	1 cut(s)	970
BstSCI	CCNGG	3 cut(s)	181, 442, 781
BstSFI	CTRYAG	4 cut(s)	538, 1112, 1146, 1616
BstUI	CGCG	4 cut(s)	27, 83, 436, 1077
BstV1I	GCAGC	8 cut(s)	387, 532, 610, 1126, 1132, 1327, 1840, 2158
BstV2I	GAAGAC	2 cut(s)	132, 399
BstX2I	RGATCY	4 cut(s)	582, 700, 1891, 2021
BstXI	CCANNNNNNTGG	1 cut(s)	617
BstYI	RGATCY	4 cut(s)	582, 700, 1891, 2021
BstZ17I	GTATAC	2 cut(s)	1355, 2108
BsuI	GTATCC	1 cut(s)	634
BsuRI	GGCC	2 cut(s)	1185, 1514
BtgI	CCRYGG	2 cut(s)	114, 961
BtsCI	GGATG	8 cut(s)	352, 481, 606, 1173, 1231, 1762, 1770, 1866
BtsI	GCAGTG	1 cut(s)	547
BtsIMutI	CAGTG	4 cut(s)	547, 1384, 1566, 1856
BveI	ACCTGC	2 cut(s)	1450, 1623
Cac8I	GCNNGC	3 cut(s)	1143, 1204, 1989
CaiI	CAGNNNCTG	2 cut(s)	1465, 1670
CciI	TCATGA	1 cut(s)	922
CfoI	GCGC	2 cut(s)	862, 1077
Cfr10I	RCCGGY	1 cut(s)	464
Cfr13I	GGNCC	1 cut(s)	1183
CseI	GACGC	2 cut(s)	16, 1461
CsiI	ACCWGGT	1 cut(s)	781
Csp6I	GTAC	3 cut(s)	399, 1274, 1399
CspAI	ACCGGT	1 cut(s)	464
CspCI	CAANNNNNGTGG	2 cut(s)	2136, 2171
CviAII	CATG	7 cut(s)	115, 266, 472, 791, 923, 962, 1811
CviQI	GTAC	3 cut(s)	399, 1274, 1399
DdeI	CTNAG	4 cut(s)	651, 1178, 1507, 1708
DpnI	GATC	9 cut(s)	80, 176, 584, 702, 953, 1383, 1893, 1919, 2023
DpnII	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
DrdI	GACNNNNNNGTC	1 cut(s)	59
DseDI	GACNNNNNNGTC	1 cut(s)	59
Eam1104I	CTCTTC	3 cut(s)	182, 827, 1791
EarI	CTCTTC	3 cut(s)	182, 827, 1791
Eco130I	CCWWGG	4 cut(s)	114, 961, 1632, 2187
Eco31I	GGTCTC	2 cut(s)	205, 455
Eco57I	CTGAAG	3 cut(s)	144, 1692, 2078
Eco88I	CYCGRG	1 cut(s)	95
EcoO109I	RGGNCCY	1 cut(s)	1183
EcoRII	CCWGG	3 cut(s)	181, 442, 781
EcoT14I	CCWWGG	4 cut(s)	114, 961, 1632, 2187
EcoT22I	ATGCAT	3 cut(s)	312, 792, 1812
ErhI	CCWWGG	4 cut(s)	114, 961, 1632, 2187
FaeI	CATG	7 cut(s)	118, 269, 475, 794, 926, 965, 1814
FatI	CATG	7 cut(s)	114, 265, 471, 790, 922, 961, 1810
FbaI	TGATCA	2 cut(s)	951, 1381
FblI	GTMKAC	4 cut(s)	658, 1354, 2107, 2193
Fnu4HI	GCNGC	9 cut(s)	376, 521, 624, 1115, 1146, 1316, 1685, 1854, 2172
FokI	GGATG	8 cut(s)	359, 488, 593, 1180, 1238, 1757, 1769, 1853
Fsp4HI	GCNGC	9 cut(s)	376, 521, 624, 1115, 1146, 1316, 1685, 1854, 2172
FspBI	CTAG	7 cut(s)	360, 627, 1020, 1043, 1656, 2028, 2132
GlaI	GCGC	2 cut(s)	861, 1076
GluI	GCNGC	9 cut(s)	376, 521, 624, 1115, 1146, 1316, 1685, 1854, 2172
GsaI	CCCAGC	1 cut(s)	1104
GsuI	CTGGAG	6 cut(s)	29, 477, 953, 1121, 1487, 2222
HaeIII	GGCC	2 cut(s)	1185, 1514
HapII	CCGG	2 cut(s)	238, 465
HgaI	GACGC	2 cut(s)	16, 1461
HhaI	GCGC	2 cut(s)	862, 1077
Hin1I	GRCGYC	1 cut(s)	1472
Hin1II	CATG	7 cut(s)	118, 269, 475, 794, 926, 965, 1814
Hin6I	GCGC	2 cut(s)	860, 1075
HinP1I	GCGC	2 cut(s)	860, 1075
HincII	GTYRAC	1 cut(s)	1048
HindII	GTYRAC	1 cut(s)	1048
HindIII	AAGCTT	1 cut(s)	867
HpaI	GTTAAC	1 cut(s)	1048
HpaII	CCGG	2 cut(s)	238, 465
HphI	GGTGA	3 cut(s)	971, 1070, 1976
Hpy99I	CGWCG	2 cut(s)	14, 1477
HpyAV	CCTTC	3 cut(s)	2009, 2053, 2089
HpyCH4III	ACNGT	8 cut(s)	256, 316, 398, 1359, 1398, 1561, 1860, 2183
HpyCH4IV	ACGT	2 cut(s)	197, 1625
HpyF10VI	GCNNNNNNNGC	5 cut(s)	307, 866, 1212, 1478, 2132
HpyF3I	CTNAG	4 cut(s)	651, 1178, 1507, 1708
HpySE526I	ACGT	2 cut(s)	197, 1625
Hsp92I	GRCGYC	1 cut(s)	1472
Hsp92II	CATG	7 cut(s)	118, 269, 475, 794, 926, 965, 1814
HspAI	GCGC	2 cut(s)	860, 1075
Ksp22I	TGATCA	2 cut(s)	951, 1381
KspAI	GTTAAC	1 cut(s)	1048
Kzo9I	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
LguI	GCTCTTC	1 cut(s)	182
LmnI	GCTCC	3 cut(s)	48, 298, 2131
Lsp1109I	GCAGC	8 cut(s)	387, 532, 610, 1126, 1132, 1327, 1840, 2158
LweI	GCATC	6 cut(s)	895, 1224, 1721, 1747, 1875, 1957
MabI	ACCWGGT	1 cut(s)	781
MaeI	CTAG	7 cut(s)	360, 627, 1020, 1043, 1656, 2028, 2132
MaeII	ACGT	2 cut(s)	197, 1625
MaeIII	GTNAC	3 cut(s)	28, 118, 1359
MalI	GATC	9 cut(s)	80, 176, 584, 702, 953, 1383, 1893, 1919, 2023
MboI	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
MfeI	CAATTG	2 cut(s)	154, 1336
MflI	RGATCY	4 cut(s)	582, 700, 1891, 2021
MhlI	GDGCHC	2 cut(s)	1204, 1614
MluI	ACGCGT	1 cut(s)	25
MmeI	TCCRAC	2 cut(s)	188, 1455
Mph1103I	ATGCAT	3 cut(s)	312, 792, 1812
MroXI	GAANNNNTTC	3 cut(s)	256, 1331, 1581
MseI	TTAA	8 cut(s)	75, 333, 528, 603, 636, 1047, 1455, 1931
MslI	CAYNNNNRTG	1 cut(s)	1861
MspCI	CTTAAG	1 cut(s)	635
MspI	CCGG	2 cut(s)	238, 465
MspR9I	CCNGG	3 cut(s)	183, 444, 783
MunI	CAATTG	2 cut(s)	154, 1336
Mva1269I	GAATGC	3 cut(s)	444, 673, 1160
MvaI	CCWGG	3 cut(s)	183, 444, 783
MvnI	CGCG	4 cut(s)	27, 83, 436, 1077
MwoI	GCNNNNNNNGC	5 cut(s)	307, 866, 1212, 1478, 2132
NcoI	CCATGG	2 cut(s)	114, 961
NdeII	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
NlaIII	CATG	7 cut(s)	118, 269, 475, 794, 926, 965, 1814
NlaIV	GGNNCC	1 cut(s)	1184
NmuCI	GTSAC	1 cut(s)	28
NsiI	ATGCAT	3 cut(s)	312, 792, 1812
NspV	TTCGAA	1 cut(s)	1325
OliI	CACNNNNGTG	1 cut(s)	1861
PagI	TCATGA	1 cut(s)	922
PaqCI	CACCTGC	2 cut(s)	1450, 1623
PasI	CCCWGGG	1 cut(s)	182
PciSI	GCTCTTC	1 cut(s)	182
PctI	GAATGC	3 cut(s)	444, 673, 1160
PdmI	GAANNNNTTC	3 cut(s)	256, 1331, 1581
PfeI	GAWTC	7 cut(s)	91, 488, 558, 755, 935, 1676, 2228
PinAI	ACCGGT	1 cut(s)	464
PkrI	GCNGC	9 cut(s)	377, 522, 625, 1116, 1147, 1317, 1686, 1855, 2173
PshAI	GACNNNNGTC	1 cut(s)	970
PsiI	TTATAA	1 cut(s)	1121
Psp6I	CCWGG	3 cut(s)	181, 442, 781
PspFI	CCCAGC	1 cut(s)	1100
PspGI	CCWGG	3 cut(s)	181, 442, 781
PspN4I	GGNNCC	1 cut(s)	1184
PspPI	GGNCC	1 cut(s)	1183
PstI	CTGCAG	4 cut(s)	542, 1116, 1150, 1620
PstNI	CAGNNNCTG	2 cut(s)	1465, 1670
PsuI	RGATCY	4 cut(s)	582, 700, 1891, 2021
RsaI	GTAC	3 cut(s)	400, 1275, 1400
RsaNI	GTAC	3 cut(s)	399, 1274, 1399
RseI	CAYNNNNRTG	1 cut(s)	1861
SapI	GCTCTTC	1 cut(s)	182
SaqAI	TTAA	8 cut(s)	75, 333, 528, 603, 636, 1047, 1455, 1931
SatI	GCNGC	9 cut(s)	376, 521, 624, 1115, 1146, 1316, 1685, 1854, 2172
Sau3AI	GATC	9 cut(s)	78, 174, 582, 700, 951, 1381, 1891, 1917, 2021
Sau96I	GGNCC	1 cut(s)	1183
ScrFI	CCNGG	3 cut(s)	183, 444, 783
SduI	GDGCHC	2 cut(s)	1204, 1614
SexAI	ACCWGGT	1 cut(s)	781
SfaNI	GCATC	6 cut(s)	895, 1224, 1721, 1747, 1875, 1957
SfcI	CTRYAG	4 cut(s)	538, 1112, 1146, 1616
SfuI	TTCGAA	1 cut(s)	1325
SmiMI	CAYNNNNRTG	1 cut(s)	1861
SmlI	CTYRAG	2 cut(s)	635, 1816
SmoI	CTYRAG	2 cut(s)	635, 1816
SpeI	ACTAGT	2 cut(s)	1019, 2027
SsiI	CCGC	4 cut(s)	83, 148, 434, 1685
SspMI	CTAG	7 cut(s)	360, 627, 1020, 1043, 1656, 2028, 2132
StyD4I	CCNGG	3 cut(s)	181, 442, 781
StyI	CCWWGG	4 cut(s)	114, 961, 1632, 2187
TaaI	ACNGT	8 cut(s)	256, 316, 398, 1359, 1398, 1561, 1860, 2183
TaiI	ACGT	2 cut(s)	200, 1628
TaqI	TCGA	5 cut(s)	51, 89, 243, 1325, 2032
TatI	WGTACW	2 cut(s)	1273, 1398
TauI	GCSGC	1 cut(s)	1687
TfiI	GAWTC	7 cut(s)	91, 488, 558, 755, 935, 1676, 2228
Tru1I	TTAA	8 cut(s)	75, 333, 528, 603, 636, 1047, 1455, 1931
Tru9I	TTAA	8 cut(s)	75, 333, 528, 603, 636, 1047, 1455, 1931
TscAI	CASTG	4 cut(s)	547, 1384, 1566, 1863
TseFI	GTSAC	1 cut(s)	28
TseI	GCWGC	8 cut(s)	375, 520, 623, 1114, 1145, 1315, 1853, 2171
Tsp45I	GTSAC	1 cut(s)	28
TspGWI	ACGGA	1 cut(s)	1532
TspRI	CASTG	4 cut(s)	547, 1384, 1566, 1863
Vha464I	CTTAAG	1 cut(s)	635
XapI	RAATTY	4 cut(s)	103, 508, 1533, 1637
XmiI	GTMKAC	4 cut(s)	658, 1354, 2107, 2193
XmnI	GAANNNNTTC	3 cut(s)	256, 1331, 1581
XspI	CTAG	7 cut(s)	360, 627, 1020, 1043, 1656, 2028, 2132
Zsp2I	ATGCAT	3 cut(s)	312, 792, 1812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.