Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008991.1

Orthogroup ID

OG0007288

Physical Location & Seq

Genomic Coordinates Forward (+)

59810 .. 66191

Gene Structure 6382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008991.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

atggaaaccgacgaagaagaacaacgcgtcactccattccagctccagttcgacaagccagtcgcttcgcagatcgcagagtggaatcccgagaaggatttactcgccatggtaactgaagactccaagattttactgcaccgcttcaattggcagaggctctggacaatctccccagggaagagcataacgtctttgtgttggagacctgatggtaaagccgtcgccgtcgggctcgaagatggaacagtctcattgcatgatgttgaaaatggaaagttgttgaggagcttgaaatcacatactgtggctgttgtttctcttaattgggaggaggatggacagatgaccagagatgagtatggcagccacttggtatatgaagaccgtacttctcgtttctttccaccacctccaagagttccgcgaatgcctggactggtatctggagagaccggtttcatggacgatagtgaagattcatttcgagagctgtcaaattcttcacagcaacgttttaatatcctctgcagtggagataaagatggattcatttgctttagtatatttgggatctttccgatagggaaaattaacatacacaactttggtgctgctagtccacttaaggatactgaagctgagtgtagacttctgaatgcttctgtttacaaggttgctttgtcaaaagatctttgtcatttgatagtcatgtgttcaggagaattaattgaagatagggaaaaatcagaaaacaggcagatgactgaacctggtatgcatggcttacattgcatagtgcttgatacatctatattttggacgagaaaaagtgagcttcatcaagtggcgcaacaagcttctaacattgaggaattggcagaggttattcggtcatcaatttcagttatgcacaaggagtggtctgatgctatgcgcacttttcatgacaagtttgattctctgtccaatctgatcatagaccatggactccagtcctctccccaagaggagtttttgagtcttttaggcggtgcaaggactagtccagcagttcatcagtttctagttaactctctcggtgaagtgggcgtgaagcgcgtgtcaaaggctgtttgtggtgctgggaaagaactgcagcttataatcctaaatcatctccagcctgctgcagaaattatcgcattcaggatgggagaactaagaggcctttcaagatggagagcacgctatcagggcatcggtttggatgagacgcttatcaataatgcaacagaaaaagctggaatgatacttgtacaagttgaacggtttatcagggtgctttcatctgtggtgcagcagttttcgaacttcttcaattggctcttgaagtgtataaagttactcaattcagaacccagtgatcatcatcttctactgtacaatagtgaacttgttgttatattcttgaagttcctatatgaccaagatcctgttaagcagttgctggaggcgtcggaagctgatgagagtatcgaagttggattggaaacagtgcagagagttagagaattagttcagtttgggggattttcagattgtgagcacctgcagaggacgttagccaaggaatttcagcagatggagtctagttttaaggaggcttttcagatgccctttattacaatttcaagaaagatagtctgtgaagattcattgccactttgcccactgccaccttcgtcagcatctttgtctaccagtattcctatgtcagtatcatattatgaggatgcctcccattccgtctctcatcagactcgtcaacatatgtttcttgactacatatctttccatataccagatgagtcctctggtatggaaaattgtataggcatagtgagggggattatgcatgactcaagcattgtaaagaggggttatacttcagtagaagctgtactgttgtgcatccctgttggttattactgtgtggatctttctttatataaggaaagtcagattgttttattattaaatgaaacaactaccacttctgaaagctctggtgatgcctgtatgatggttgtgcaagcaaatgaccttccatttgtatctatcacaagatccactagtctaaactattggaacttgcatcaactgaaggactctgttgttcacttgcaaatggagaacgagaaggttcgcagtataccccattctgttattgctcctctagcagttagctcatcaagaggtgtggcttgtgtttttgctgcaagaaagcgtgccttggtctacattctggaggaagatgaagatgaagtttctgattcagagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0035670 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC4 ANAPC4_WD40

Protein Analysis

774

Amino Acids

87.06

Weight (kDa)

5.2

Isoelectric Point (pI)

48.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21530
fragaria_vesca	FvH4_3g04050 FvH4_3g04050 FvH4_3g04050
malus_domestica	MD10G1303000.v1.1
prunus_persica	Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1 Prupe.4G036500_v2.0.a1
pyrus_communis	pycom10g25560
rosa_chinensis	RchiOBHm_Chr5g0006531
rosa_laevigata	RLG00000031396 RLG00000034652
rosa_multiflora	Rmu_sc0008991.1_g000016
rosa_roxburghii	Rroxscaffold_1G00031790 Rroxscaffold_1G00069530
rosa_rugosa	Rorug04G0421700
rosa_samantha	Rh5AG049400 Rh5BG048700 Rh5CG057000 Rh5DG048000
rosa_wichuraiana	Rw5G004950 Rw5G030980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1145
AarI	CACCTGC	1 cut(s)	1599
AasI	GACNNNNNNGTC	1 cut(s)	59
Acc16I	TGCGCA	1 cut(s)	938
Acc36I	ACCTGC	1 cut(s)	1599
AccI	GTMKAC	4 cut(s)	649, 1739, 2194, 2280
AccII	CGCG	3 cut(s)	27, 427, 1101
AciI	CCGC	3 cut(s)	142, 425, 1032
AclI	AACGTT	1 cut(s)	514
AclWI	GGATC	4 cut(s)	581, 1466, 1986, 2103
AcsI	RAATTY	2 cut(s)	499, 1613
AcuI	CTGAAG	4 cut(s)	138, 657, 1914, 2165
AcyI	GRCGYC	1 cut(s)	1496
AfaI	GTAC	4 cut(s)	391, 1299, 1424, 1944
AflII	CTTAAG	1 cut(s)	626
AflIII	ACRYGT	1 cut(s)	25
AgeI	ACCGGT	1 cut(s)	455
AhlI	ACTAGT	2 cut(s)	1043, 2114
AjnI	CCWGG	3 cut(s)	175, 433, 772
Alw21I	GWGCWC	2 cut(s)	1228, 1590
Alw26I	GTCTC	5 cut(s)	199, 256, 446, 1247, 1795
AlwI	GGATC	4 cut(s)	581, 1466, 1986, 2103
AlwNI	CAGNNNCTG	1 cut(s)	1489
Ama87I	CYCGRG	1 cut(s)	89
AoxI	GGCC	1 cut(s)	1207
ApeKI	GCWGC	6 cut(s)	366, 614, 1138, 1169, 1339, 2258
ApoI	RAATTY	2 cut(s)	499, 1613
ArsI	GACNNNNNNTTYG	2 cut(s)	2075, 2107
AseI	ATTAAT	1 cut(s)	728
AsiGI	ACCGGT	1 cut(s)	455
Asp700I	GAANNNNTTC	2 cut(s)	1355, 1557
AspLEI	GCGC	3 cut(s)	853, 939, 1101
AsuHPI	GGTGA	2 cut(s)	1094, 2063
AsuII	TTCGAA	1 cut(s)	1349
AvaI	CYCGRG	1 cut(s)	89
BanII	GRGCYC	1 cut(s)	237
BbsI	GAAGAC	2 cut(s)	126, 390
Bbv12I	GWGCWC	2 cut(s)	1228, 1590
BbvI	GCAGC	6 cut(s)	378, 601, 1150, 1156, 1351, 2245
BccI	CCATC	8 cut(s)	206, 236, 332, 539, 1186, 1212, 1618, 2059
BceAI	ACGGC	2 cut(s)	206, 212
BciT130I	CCWGG	3 cut(s)	177, 435, 774
BciVI	GTATCC	1 cut(s)	625
BclI	TGATCA	2 cut(s)	975, 1405
BcoDI	GTCTC	5 cut(s)	199, 256, 446, 1247, 1795
BcuI	ACTAGT	2 cut(s)	1043, 2114
BfaI	CTAG	6 cut(s)	618, 1044, 1067, 1632, 2115, 2219
BfmI	CTRYAG	4 cut(s)	529, 1136, 1170, 1592
BfrI	CTTAAG	1 cut(s)	626
BfuAI	ACCTGC	1 cut(s)	1599
BfuI	GTATCC	1 cut(s)	625
BglII	AGATCT	1 cut(s)	691
BisI	GCNGC	6 cut(s)	367, 615, 1139, 1170, 1340, 2259
BlsI	GCNGC	6 cut(s)	368, 616, 1140, 1171, 1341, 2260
Bme1390I	CCNGG	3 cut(s)	177, 435, 774
BmeT110I	CYCGRG	1 cut(s)	89
BmrFI	CCNGG	3 cut(s)	177, 435, 774
BmrI	ACTGGG	1 cut(s)	1395
BmsI	GCATC	8 cut(s)	919, 1248, 1644, 1739, 1765, 1962, 2044, 2146
BmuI	ACTGGG	1 cut(s)	1395
BoxI	GACNNNNGTC	1 cut(s)	994
BpiI	GAAGAC	2 cut(s)	126, 390
BplI	GAGNNNNNCTC	2 cut(s)	1763, 1795
BpmI	CTGGAG	6 cut(s)	29, 468, 977, 1145, 1511, 2309
Bpu14I	TTCGAA	1 cut(s)	1349
BpuEI	CTTGAG	1 cut(s)	1888
BsaBI	GATNNNNATC	1 cut(s)	1410
BsaHI	GRCGYC	1 cut(s)	1496
BsaI	GGTCTC	2 cut(s)	199, 446
BsaJI	CCNNGG	6 cut(s)	108, 175, 176, 985, 1608, 2274
BsaWI	WCCGGW	1 cut(s)	455
Bse118I	RCCGGY	1 cut(s)	455
Bse1I	ACTGG	6 cut(s)	46, 59, 444, 994, 1401, 1743
Bse3DI	GCAATG	3 cut(s)	254, 790, 1697
Bse8I	GATNNNNATC	1 cut(s)	1410
BseBI	CCWGG	3 cut(s)	177, 435, 774
BseDI	CCNNGG	6 cut(s)	108, 175, 176, 985, 1608, 2274
BseGI	GGATG	5 cut(s)	343, 1197, 1255, 1780, 1953
BseJI	GATNNNNATC	1 cut(s)	1410
BseMI	GCAATG	3 cut(s)	254, 790, 1697
BseMII	CTCAG	1 cut(s)	633
BseNI	ACTGG	6 cut(s)	46, 59, 444, 994, 1401, 1743
BseRI	GAGGAG	4 cut(s)	301, 347, 1025, 2205
BseXI	GCAGC	6 cut(s)	378, 601, 1150, 1156, 1351, 2245
BseYI	CCCAGC	1 cut(s)	1124
BsgI	GTGCAG	3 cut(s)	122, 1358, 1559
Bsh1236I	CGCG	3 cut(s)	27, 427, 1101
BshFI	GGCC	1 cut(s)	1209
BshTI	ACCGGT	1 cut(s)	455
BsiHKAI	GWGCWC	2 cut(s)	1228, 1590
BsiHKCI	CYCGRG	1 cut(s)	89
BsiSI	CCGG	1 cut(s)	456
BsmAI	GTCTC	5 cut(s)	199, 256, 446, 1247, 1795
BsmBI	CGTCTC	2 cut(s)	1247, 1795
BsmI	GAATGC	3 cut(s)	435, 664, 1184
BsnI	GGCC	1 cut(s)	1209
Bso31I	GGTCTC	2 cut(s)	199, 446
BsoBI	CYCGRG	1 cut(s)	89
Bsp119I	TTCGAA	1 cut(s)	1349
Bsp1286I	GDGCHC	3 cut(s)	237, 1228, 1590
Bsp1407I	TGTACA	2 cut(s)	1297, 1422
Bsp143I	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
Bsp19I	CCATGG	2 cut(s)	108, 985
BspACI	CCGC	3 cut(s)	142, 425, 1032
BspANI	GGCC	1 cut(s)	1209
BspCNI	CTCAG	1 cut(s)	634
BspFNI	CGCG	3 cut(s)	27, 427, 1101
BspHI	TCATGA	1 cut(s)	946
BspMAI	CTGCAG	4 cut(s)	533, 1140, 1174, 1596
BspMI	ACCTGC	1 cut(s)	1599
BspPI	GGATC	4 cut(s)	581, 1466, 1986, 2103
BspQI	GCTCTTC	1 cut(s)	176
BspT104I	TTCGAA	1 cut(s)	1349
BspTI	CTTAAG	1 cut(s)	626
BspTNI	GGTCTC	2 cut(s)	199, 446
BsrDI	GCAATG	3 cut(s)	254, 790, 1697
BsrFI	RCCGGY	1 cut(s)	455
BsrGI	TGTACA	2 cut(s)	1297, 1422
BsrI	ACTGG	6 cut(s)	46, 59, 444, 994, 1401, 1743
BssAI	RCCGGY	1 cut(s)	455
BssECI	CCNNGG	6 cut(s)	108, 175, 176, 985, 1608, 2274
BssMI	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
BssNAI	GTATAC	1 cut(s)	2195
BssNI	GRCGYC	1 cut(s)	1496
BssT1I	CCWWGG	4 cut(s)	108, 985, 1608, 2274
Bst1107I	GTATAC	1 cut(s)	2195
Bst2UI	CCWGG	3 cut(s)	177, 435, 774
Bst4CI	ACNGT	8 cut(s)	250, 307, 389, 1311, 1422, 1537, 1947, 1973
Bst6I	CTCTTC	1 cut(s)	176
BstACI	GRCGYC	1 cut(s)	1496
BstAFI	CTTAAG	1 cut(s)	626
BstAUI	TGTACA	2 cut(s)	1297, 1422
BstBI	TTCGAA	1 cut(s)	1349
BstC8I	GCNNGC	4 cut(s)	1167, 1228, 2076, 2271
BstDEI	CTNAG	2 cut(s)	642, 1202
BstDSI	CCRYGG	2 cut(s)	108, 985
BstF5I	GGATG	5 cut(s)	343, 1197, 1255, 1780, 1953
BstFNI	CGCG	3 cut(s)	27, 427, 1101
BstHHI	GCGC	3 cut(s)	853, 939, 1101
BstKTI	GATC	8 cut(s)	75, 576, 694, 978, 1408, 1474, 1981, 2111
BstMAI	GTCTC	5 cut(s)	199, 256, 446, 1247, 1795
BstMBI	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
BstMWI	GCNNNNNNNGC	6 cut(s)	792, 857, 1098, 1236, 1502, 2219
BstNI	CCWGG	3 cut(s)	177, 435, 774
BstPAI	GACNNNNGTC	1 cut(s)	994
BstSCI	CCNGG	3 cut(s)	175, 433, 772
BstSFI	CTRYAG	4 cut(s)	529, 1136, 1170, 1592
BstUI	CGCG	3 cut(s)	27, 427, 1101
BstV1I	GCAGC	6 cut(s)	378, 601, 1150, 1156, 1351, 2245
BstV2I	GAAGAC	2 cut(s)	126, 390
BstX2I	RGATCY	5 cut(s)	573, 691, 1471, 1978, 2108
BstYI	RGATCY	5 cut(s)	573, 691, 1471, 1978, 2108
BstZ17I	GTATAC	1 cut(s)	2195
BsuI	GTATCC	1 cut(s)	625
BsuRI	GGCC	1 cut(s)	1209
BtgI	CCRYGG	2 cut(s)	108, 985
BtsCI	GGATG	5 cut(s)	343, 1197, 1255, 1780, 1953
BtsI	GCAGTG	2 cut(s)	538, 1712
BtsIMutI	CAGTG	4 cut(s)	538, 1408, 1542, 1712
BveI	ACCTGC	1 cut(s)	1599
Cac8I	GCNNGC	4 cut(s)	1167, 1228, 2076, 2271
CaiI	CAGNNNCTG	1 cut(s)	1489
CciI	TCATGA	1 cut(s)	946
CfoI	GCGC	3 cut(s)	853, 939, 1101
Cfr10I	RCCGGY	1 cut(s)	455
CseI	GACGC	3 cut(s)	16, 1264, 1485
CsiI	ACCWGGT	1 cut(s)	772
Csp6I	GTAC	4 cut(s)	390, 1298, 1423, 1943
CspAI	ACCGGT	1 cut(s)	455
CspCI	CAANNNNNGTGG	2 cut(s)	2223, 2258
CviAII	CATG	8 cut(s)	109, 260, 463, 712, 782, 947, 986, 1898
CviQI	GTAC	4 cut(s)	390, 1298, 1423, 1943
DdeI	CTNAG	2 cut(s)	642, 1202
DpnI	GATC	8 cut(s)	74, 575, 693, 977, 1407, 1473, 1980, 2110
DpnII	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
DrdI	GACNNNNNNGTC	1 cut(s)	59
DseDI	GACNNNNNNGTC	1 cut(s)	59
Eam1104I	CTCTTC	1 cut(s)	176
EarI	CTCTTC	1 cut(s)	176
Eco130I	CCWWGG	4 cut(s)	108, 985, 1608, 2274
Eco147I	AGGCCT	1 cut(s)	1209
Eco24I	GRGCYC	1 cut(s)	237
Eco31I	GGTCTC	2 cut(s)	199, 446
Eco57I	CTGAAG	4 cut(s)	138, 657, 1914, 2165
Eco88I	CYCGRG	1 cut(s)	89
EcoRII	CCWGG	3 cut(s)	175, 433, 772
EcoT14I	CCWWGG	4 cut(s)	108, 985, 1608, 2274
EcoT22I	ATGCAT	2 cut(s)	783, 1899
EcoT38I	GRGCYC	1 cut(s)	237
ErhI	CCWWGG	4 cut(s)	108, 985, 1608, 2274
Esp3I	CGTCTC	2 cut(s)	1247, 1795
FaeI	CATG	8 cut(s)	112, 263, 466, 715, 785, 950, 989, 1901
FalI	AAGNNNNNCTT	2 cut(s)	2258, 2290
FatI	CATG	8 cut(s)	108, 259, 462, 711, 781, 946, 985, 1897
FauNDI	CATATG	1 cut(s)	1812
FbaI	TGATCA	2 cut(s)	975, 1405
FblI	GTMKAC	4 cut(s)	649, 1739, 2194, 2280
Fnu4HI	GCNGC	6 cut(s)	367, 615, 1139, 1170, 1340, 2259
FokI	GGATG	5 cut(s)	350, 1204, 1262, 1787, 1940
FriOI	GRGCYC	1 cut(s)	237
Fsp4HI	GCNGC	6 cut(s)	367, 615, 1139, 1170, 1340, 2259
FspAI	RTGCGCAY	1 cut(s)	938
FspBI	CTAG	6 cut(s)	618, 1044, 1067, 1632, 2115, 2219
FspI	TGCGCA	1 cut(s)	938
GlaI	GCGC	3 cut(s)	852, 938, 1100
GluI	GCNGC	6 cut(s)	367, 615, 1139, 1170, 1340, 2259
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	6 cut(s)	29, 468, 977, 1145, 1511, 2309
HaeIII	GGCC	1 cut(s)	1209
HapII	CCGG	1 cut(s)	456
HgaI	GACGC	3 cut(s)	16, 1264, 1485
HhaI	GCGC	3 cut(s)	853, 939, 1101
Hin1I	GRCGYC	1 cut(s)	1496
Hin1II	CATG	8 cut(s)	112, 263, 466, 715, 785, 950, 989, 1901
Hin6I	GCGC	3 cut(s)	851, 937, 1099
HinP1I	GCGC	3 cut(s)	851, 937, 1099
HincII	GTYRAC	2 cut(s)	1072, 1808
HindII	GTYRAC	2 cut(s)	1072, 1808
HindIII	AAGCTT	1 cut(s)	858
HpaI	GTTAAC	1 cut(s)	1072
HpaII	CCGG	1 cut(s)	456
HphI	GGTGA	2 cut(s)	1094, 2063
Hpy99I	CGWCG	4 cut(s)	14, 227, 233, 1501
HpyAV	CCTTC	5 cut(s)	88, 1731, 2096, 2140, 2176
HpyCH4III	ACNGT	8 cut(s)	250, 307, 389, 1311, 1422, 1537, 1947, 1973
HpyCH4IV	ACGT	3 cut(s)	191, 514, 1601
HpyF10VI	GCNNNNNNNGC	6 cut(s)	792, 857, 1098, 1236, 1502, 2219
HpyF3I	CTNAG	2 cut(s)	642, 1202
HpySE526I	ACGT	3 cut(s)	191, 514, 1601
Hsp92I	GRCGYC	1 cut(s)	1496
Hsp92II	CATG	8 cut(s)	112, 263, 466, 715, 785, 950, 989, 1901
HspAI	GCGC	3 cut(s)	851, 937, 1099
Ksp22I	TGATCA	2 cut(s)	975, 1405
KspAI	GTTAAC	1 cut(s)	1072
Kzo9I	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
LguI	GCTCTTC	1 cut(s)	176
LmnI	GCTCC	3 cut(s)	48, 288, 2218
Lsp1109I	GCAGC	6 cut(s)	378, 601, 1150, 1156, 1351, 2245
LweI	GCATC	8 cut(s)	919, 1248, 1644, 1739, 1765, 1962, 2044, 2146
MabI	ACCWGGT	1 cut(s)	772
MaeI	CTAG	6 cut(s)	618, 1044, 1067, 1632, 2115, 2219
MaeII	ACGT	3 cut(s)	191, 514, 1601
MaeIII	GTNAC	3 cut(s)	28, 112, 1383
MalI	GATC	8 cut(s)	74, 575, 693, 977, 1407, 1473, 1980, 2110
MboI	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
MfeI	CAATTG	2 cut(s)	148, 1360
MflI	RGATCY	5 cut(s)	573, 691, 1471, 1978, 2108
MhlI	GDGCHC	3 cut(s)	237, 1228, 1590
MluI	ACGCGT	1 cut(s)	25
MlyI	GAGTC	8 cut(s)	116, 984, 1030, 1637, 1795, 1859, 1895, 2144
MmeI	TCCRAC	3 cut(s)	182, 1479, 1504
Mph1103I	ATGCAT	2 cut(s)	783, 1899
MroXI	GAANNNNTTC	2 cut(s)	1355, 1557
MseI	TTAA	9 cut(s)	324, 519, 594, 627, 728, 1071, 1479, 1638, 2018
MspCI	CTTAAG	1 cut(s)	626
MspI	CCGG	1 cut(s)	456
MspR9I	CCNGG	3 cut(s)	177, 435, 774
MunI	CAATTG	2 cut(s)	148, 1360
Mva1269I	GAATGC	3 cut(s)	435, 664, 1184
MvaI	CCWGG	3 cut(s)	177, 435, 774
MvnI	CGCG	3 cut(s)	27, 427, 1101
MwoI	GCNNNNNNNGC	6 cut(s)	792, 857, 1098, 1236, 1502, 2219
NcoI	CCATGG	2 cut(s)	108, 985
NdeI	CATATG	1 cut(s)	1812
NdeII	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
NlaIII	CATG	8 cut(s)	112, 263, 466, 715, 785, 950, 989, 1901
NmuCI	GTSAC	1 cut(s)	28
NsbI	TGCGCA	1 cut(s)	938
NsiI	ATGCAT	2 cut(s)	783, 1899
NspV	TTCGAA	1 cut(s)	1349
PagI	TCATGA	1 cut(s)	946
PaqCI	CACCTGC	1 cut(s)	1599
PasI	CCCWGGG	1 cut(s)	176
PceI	AGGCCT	1 cut(s)	1209
PciSI	GCTCTTC	1 cut(s)	176
PctI	GAATGC	3 cut(s)	435, 664, 1184
PdmI	GAANNNNTTC	2 cut(s)	1355, 1557
PfeI	GAWTC	6 cut(s)	85, 479, 549, 959, 1694, 2315
PinAI	ACCGGT	1 cut(s)	455
PkrI	GCNGC	6 cut(s)	368, 616, 1140, 1171, 1341, 2260
PleI	GAGTC	8 cut(s)	116, 984, 1029, 1636, 1795, 1858, 1895, 2144
PpsI	GAGTC	8 cut(s)	116, 984, 1029, 1636, 1795, 1858, 1895, 2144
PshAI	GACNNNNGTC	1 cut(s)	994
PshBI	ATTAAT	1 cut(s)	728
PsiI	TTATAA	1 cut(s)	1145
Psp1406I	AACGTT	1 cut(s)	514
Psp6I	CCWGG	3 cut(s)	175, 433, 772
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	3 cut(s)	175, 433, 772
PstI	CTGCAG	4 cut(s)	533, 1140, 1174, 1596
PstNI	CAGNNNCTG	1 cut(s)	1489
PsuI	RGATCY	5 cut(s)	573, 691, 1471, 1978, 2108
RsaI	GTAC	4 cut(s)	391, 1299, 1424, 1944
RsaNI	GTAC	4 cut(s)	390, 1298, 1423, 1943
SapI	GCTCTTC	1 cut(s)	176
SaqAI	TTAA	9 cut(s)	324, 519, 594, 627, 728, 1071, 1479, 1638, 2018
SatI	GCNGC	6 cut(s)	367, 615, 1139, 1170, 1340, 2259
Sau3AI	GATC	8 cut(s)	72, 573, 691, 975, 1405, 1471, 1978, 2108
SchI	GAGTC	8 cut(s)	116, 984, 1030, 1637, 1795, 1859, 1895, 2144
ScrFI	CCNGG	3 cut(s)	177, 435, 774
SduI	GDGCHC	3 cut(s)	237, 1228, 1590
SexAI	ACCWGGT	1 cut(s)	772
SfaNI	GCATC	8 cut(s)	919, 1248, 1644, 1739, 1765, 1962, 2044, 2146
SfcI	CTRYAG	4 cut(s)	529, 1136, 1170, 1592
SfuI	TTCGAA	1 cut(s)	1349
SmlI	CTYRAG	2 cut(s)	626, 1903
SmoI	CTYRAG	2 cut(s)	626, 1903
SpeI	ACTAGT	2 cut(s)	1043, 2114
SseBI	AGGCCT	1 cut(s)	1209
SsiI	CCGC	3 cut(s)	142, 425, 1032
SspMI	CTAG	6 cut(s)	618, 1044, 1067, 1632, 2115, 2219
StuI	AGGCCT	1 cut(s)	1209
StyD4I	CCNGG	3 cut(s)	175, 433, 772
StyI	CCWWGG	4 cut(s)	108, 985, 1608, 2274
TaaI	ACNGT	8 cut(s)	250, 307, 389, 1311, 1422, 1537, 1947, 1973
TaiI	ACGT	3 cut(s)	194, 517, 1604
TaqI	TCGA	5 cut(s)	51, 237, 487, 1349, 1518
TaqII	GACCGA	1 cut(s)	882
TatI	WGTACW	3 cut(s)	1297, 1422, 1942
TfiI	GAWTC	6 cut(s)	85, 479, 549, 959, 1694, 2315
Tru1I	TTAA	9 cut(s)	324, 519, 594, 627, 728, 1071, 1479, 1638, 2018
Tru9I	TTAA	9 cut(s)	324, 519, 594, 627, 728, 1071, 1479, 1638, 2018
TscAI	CASTG	4 cut(s)	538, 1408, 1542, 1719
TseFI	GTSAC	1 cut(s)	28
TseI	GCWGC	6 cut(s)	366, 614, 1138, 1169, 1339, 2258
Tsp45I	GTSAC	1 cut(s)	28
TspGWI	ACGGA	1 cut(s)	1777
TspRI	CASTG	4 cut(s)	538, 1408, 1542, 1719
Vha464I	CTTAAG	1 cut(s)	626
VspI	ATTAAT	1 cut(s)	728
XapI	RAATTY	2 cut(s)	499, 1613
XmiI	GTMKAC	4 cut(s)	649, 1739, 2194, 2280
XmnI	GAANNNNTTC	2 cut(s)	1355, 1557
XspI	CTAG	6 cut(s)	618, 1044, 1067, 1632, 2115, 2219
Zsp2I	ATGCAT	2 cut(s)	783, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.