Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16300 AT1G79530 |
| fragaria_vesca | FvH4_3g14640 |
| malus_domestica | MD05G1234400.v1.1 MD10G1210900.v1.1 |
| prunus_persica | Prupe.4G131700_v2.0.a1 Prupe.4G131700_v2.0.a1 |
| pyrus_communis | pycom05g21170 pycom10g17920 pycom10g17930 |
| rosa_chinensis | RchiOBHm_Chr5g0024101 |
| rosa_laevigata | RLG00000032770 |
| rosa_multiflora | Rmu_sc0020340.1_g000003 Rmu_sc0026565.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00055140 Rroxscaffold_1G00055670 |
| rosa_rugosa | Rorug05G0081300 |
| rosa_samantha | Rh5AG172200 Rh5BG168700 Rh5CG184500 Rh5DG171000 |
| rosa_wichuraiana | Rw0G003230 Rw5G015540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 57 |
| AccI | GTMKAC | 1 cut(s) | 1012 |
| AccII | CGCG | 1 cut(s) | 972 |
| AciI | CCGC | 7 cut(s) | 24, 27, 55, 75, 81, 313, 970 |
| AclWI | GGATC | 4 cut(s) | 9, 365, 377, 517 |
| AcoI | YGGCCR | 1 cut(s) | 865 |
| AcsI | RAATTY | 2 cut(s) | 237, 770 |
| AfaI | GTAC | 3 cut(s) | 392, 413, 727 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 153, 1082, 1243 |
| AflIII | ACRYGT | 1 cut(s) | 402 |
| AgeI | ACCGGT | 1 cut(s) | 902 |
| AgsI | TTSAA | 3 cut(s) | 124, 132, 900 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1141 |
| AjnI | CCWGG | 3 cut(s) | 200, 338, 527 |
| AluBI | AGCT | 6 cut(s) | 638, 647, 723, 875, 952, 1198 |
| AluI | AGCT | 6 cut(s) | 638, 647, 723, 875, 952, 1198 |
| Alw21I | GWGCWC | 1 cut(s) | 1260 |
| AlwI | GGATC | 4 cut(s) | 9, 365, 377, 517 |
| AoxI | GGCC | 4 cut(s) | 838, 865, 963, 1073 |
| ApeKI | GCWGC | 7 cut(s) | 7, 593, 875, 908, 1049, 1064, 1274 |
| ApoI | RAATTY | 2 cut(s) | 237, 770 |
| AsiGI | ACCGGT | 1 cut(s) | 902 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 5 cut(s) | 511, 839, 1073, 1143, 1246 |
| AsuHPI | GGTGA | 3 cut(s) | 568, 769, 1145 |
| AsuII | TTCGAA | 1 cut(s) | 45 |
| AvaII | GGWCC | 3 cut(s) | 511, 1143, 1246 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 233, 266 |
| BbsI | GAAGAC | 1 cut(s) | 171 |
| Bbv12I | GWGCWC | 1 cut(s) | 1260 |
| BbvI | GCAGC | 5 cut(s) | 580, 862, 895, 1051, 1061 |
| BccI | CCATC | 7 cut(s) | 155, 431, 649, 830, 850, 1061, 1064 |
| BciT130I | CCWGG | 3 cut(s) | 202, 340, 529 |
| BciVI | GTATCC | 1 cut(s) | 1088 |
| BfaI | CTAG | 1 cut(s) | 894 |
| BfmI | CTRYAG | 2 cut(s) | 516, 813 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfuI | GTATCC | 1 cut(s) | 1088 |
| BisI | GCNGC | 8 cut(s) | 8, 27, 594, 876, 909, 1050, 1065, 1275 |
| BlsI | GCNGC | 8 cut(s) | 9, 28, 595, 877, 910, 1051, 1066, 1276 |
| Bme1390I | CCNGG | 3 cut(s) | 202, 340, 529 |
| Bme18I | GGWCC | 3 cut(s) | 511, 1143, 1246 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1141 |
| BmgT120I | GGNCC | 5 cut(s) | 511, 839, 1073, 1143, 1246 |
| BmiI | GGNNCC | 2 cut(s) | 512, 513 |
| BmrFI | CCNGG | 3 cut(s) | 202, 340, 529 |
| BmsI | GCATC | 3 cut(s) | 640, 1147, 1158 |
| BpiI | GAAGAC | 1 cut(s) | 171 |
| Bpu14I | TTCGAA | 1 cut(s) | 45 |
| BpuEI | CTTGAG | 3 cut(s) | 605, 1037, 1123 |
| BsaAI | YACGTR | 1 cut(s) | 249 |
| BsaJI | CCNNGG | 7 cut(s) | 339, 468, 527, 528, 753, 868, 1161 |
| BsaWI | WCCGGW | 1 cut(s) | 902 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 153, 1082, 1243 |
| Bse118I | RCCGGY | 2 cut(s) | 170, 902 |
| Bse1I | ACTGG | 1 cut(s) | 961 |
| BseBI | CCWGG | 3 cut(s) | 202, 340, 529 |
| BseDI | CCNNGG | 7 cut(s) | 339, 468, 527, 528, 753, 868, 1161 |
| BseGI | GGATG | 5 cut(s) | 143, 349, 463, 841, 1045 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 153, 1082, 1243 |
| BseMII | CTCAG | 2 cut(s) | 25, 893 |
| BseNI | ACTGG | 1 cut(s) | 961 |
| BseRI | GAGGAG | 1 cut(s) | 885 |
| BseXI | GCAGC | 5 cut(s) | 580, 862, 895, 1051, 1061 |
| Bsh1236I | CGCG | 1 cut(s) | 972 |
| BshFI | GGCC | 4 cut(s) | 840, 867, 965, 1075 |
| BshTI | ACCGGT | 1 cut(s) | 902 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1260 |
| BsiSI | CCGG | 2 cut(s) | 171, 903 |
| BslFI | GGGAC | 2 cut(s) | 524, 959 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 153, 1082, 1243 |
| BsmFI | GGGAC | 2 cut(s) | 524, 959 |
| BsmI | GAATGC | 1 cut(s) | 1086 |
| BsnI | GGCC | 4 cut(s) | 840, 867, 965, 1075 |
| Bsp119I | TTCGAA | 1 cut(s) | 45 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1260 |
| Bsp143I | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| BspACI | CCGC | 7 cut(s) | 24, 27, 55, 75, 81, 313, 970 |
| BspANI | GGCC | 4 cut(s) | 840, 867, 965, 1075 |
| BspCNI | CTCAG | 2 cut(s) | 24, 892 |
| BspFNI | CGCG | 1 cut(s) | 972 |
| BspHI | TCATGA | 1 cut(s) | 763 |
| BspLI | GGNNCC | 2 cut(s) | 512, 513 |
| BspMAI | CTGCAG | 1 cut(s) | 520 |
| BspPI | GGATC | 4 cut(s) | 9, 365, 377, 517 |
| BspT104I | TTCGAA | 1 cut(s) | 45 |
| BsrBI | CCGCTC | 1 cut(s) | 57 |
| BsrFI | RCCGGY | 2 cut(s) | 170, 902 |
| BsrI | ACTGG | 1 cut(s) | 961 |
| BssAI | RCCGGY | 2 cut(s) | 170, 902 |
| BssECI | CCNNGG | 7 cut(s) | 339, 468, 527, 528, 753, 868, 1161 |
| BssMI | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| BssT1I | CCWWGG | 3 cut(s) | 468, 753, 1161 |
| Bst2UI | CCWGG | 3 cut(s) | 202, 340, 529 |
| Bst4CI | ACNGT | 3 cut(s) | 128, 802, 832 |
| BstBAI | YACGTR | 1 cut(s) | 249 |
| BstBI | TTCGAA | 1 cut(s) | 45 |
| BstC8I | GCNNGC | 2 cut(s) | 721, 807 |
| BstDEI | CTNAG | 5 cut(s) | 11, 387, 879, 1079, 1178 |
| BstF5I | GGATG | 5 cut(s) | 143, 349, 463, 841, 1045 |
| BstFNI | CGCG | 1 cut(s) | 972 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 6 cut(s) | 17, 260, 279, 373, 385, 525 |
| BstMBI | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 32, 644, 749, 815, 914, 1172, 1271 |
| BstNI | CCWGG | 3 cut(s) | 202, 340, 529 |
| BstNSI | RCATGY | 2 cut(s) | 406, 809 |
| BstSCI | CCNGG | 3 cut(s) | 200, 338, 527 |
| BstSFI | CTRYAG | 2 cut(s) | 516, 813 |
| BstUI | CGCG | 1 cut(s) | 972 |
| BstV1I | GCAGC | 5 cut(s) | 580, 862, 895, 1051, 1061 |
| BstV2I | GAAGAC | 1 cut(s) | 171 |
| BstX2I | RGATCY | 2 cut(s) | 14, 522 |
| BstYI | RGATCY | 2 cut(s) | 14, 522 |
| BsuI | GTATCC | 1 cut(s) | 1088 |
| BsuRI | GGCC | 4 cut(s) | 840, 867, 965, 1075 |
| BtsCI | GGATG | 5 cut(s) | 143, 349, 463, 841, 1045 |
| BtsI | GCAGTG | 2 cut(s) | 274, 369 |
| BtsIMutI | CAGTG | 4 cut(s) | 274, 369, 454, 837 |
| Cac8I | GCNNGC | 2 cut(s) | 721, 807 |
| CciI | TCATGA | 1 cut(s) | 763 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr10I | RCCGGY | 2 cut(s) | 170, 902 |
| Cfr13I | GGNCC | 5 cut(s) | 511, 839, 1073, 1143, 1246 |
| CseI | GACGC | 1 cut(s) | 961 |
| Csp6I | GTAC | 3 cut(s) | 391, 412, 726 |
| CspAI | ACCGGT | 1 cut(s) | 902 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 606, 641 |
| CviAII | CATG | 8 cut(s) | 394, 403, 425, 658, 764, 806, 1206, 1261 |
| CviQI | GTAC | 3 cut(s) | 391, 412, 726 |
| DdeI | CTNAG | 5 cut(s) | 11, 387, 879, 1079, 1178 |
| DpnI | GATC | 6 cut(s) | 16, 259, 278, 372, 384, 524 |
| DpnII | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1141 |
| EaeI | YGGCCR | 1 cut(s) | 865 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1141 |
| EciI | GGCGGA | 1 cut(s) | 64 |
| Eco130I | CCWWGG | 3 cut(s) | 468, 753, 1161 |
| Eco47I | GGWCC | 3 cut(s) | 511, 1143, 1246 |
| EcoO109I | RGGNCCY | 1 cut(s) | 511 |
| EcoRII | CCWGG | 3 cut(s) | 200, 338, 527 |
| EcoT14I | CCWWGG | 3 cut(s) | 468, 753, 1161 |
| ErhI | CCWWGG | 3 cut(s) | 468, 753, 1161 |
| FaeI | CATG | 8 cut(s) | 397, 406, 428, 661, 767, 809, 1209, 1264 |
| FaqI | GGGAC | 2 cut(s) | 524, 959 |
| FatI | CATG | 8 cut(s) | 393, 402, 424, 657, 763, 805, 1205, 1260 |
| FauI | CCCGC | 1 cut(s) | 62 |
| FblI | GTMKAC | 1 cut(s) | 1012 |
| Fnu4HI | GCNGC | 8 cut(s) | 8, 27, 594, 876, 909, 1050, 1065, 1275 |
| FokI | GGATG | 5 cut(s) | 130, 356, 470, 848, 1052 |
| Fsp4HI | GCNGC | 8 cut(s) | 8, 27, 594, 876, 909, 1050, 1065, 1275 |
| FspBI | CTAG | 1 cut(s) | 894 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 8 cut(s) | 8, 27, 594, 876, 909, 1050, 1065, 1275 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 4 cut(s) | 840, 867, 965, 1075 |
| HapII | CCGG | 2 cut(s) | 171, 903 |
| HgaI | GACGC | 1 cut(s) | 961 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 8 cut(s) | 397, 406, 428, 661, 767, 809, 1209, 1264 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HincII | GTYRAC | 1 cut(s) | 1013 |
| HindII | GTYRAC | 1 cut(s) | 1013 |
| HindIII | AAGCTT | 1 cut(s) | 1196 |
| HinfI | GANTC | 6 cut(s) | 288, 416, 461, 560, 760, 1136 |
| HpaII | CCGG | 2 cut(s) | 171, 903 |
| HphI | GGTGA | 3 cut(s) | 568, 769, 1145 |
| Hpy166II | GTNNAC | 2 cut(s) | 1000, 1013 |
| Hpy188I | TCNGA | 6 cut(s) | 14, 61, 255, 306, 792, 882 |
| Hpy188III | TCNNGA | 3 cut(s) | 584, 764, 782 |
| Hpy8I | GTNNAC | 2 cut(s) | 1000, 1013 |
| HpyAV | CCTTC | 5 cut(s) | 583, 779, 844, 976, 1015 |
| HpyCH4III | ACNGT | 3 cut(s) | 128, 802, 832 |
| HpyCH4IV | ACGT | 1 cut(s) | 248 |
| HpyCH4V | TGCA | 9 cut(s) | 139, 518, 596, 617, 653, 719, 805, 809, 911 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 32, 644, 749, 815, 914, 1172, 1271 |
| HpyF3I | CTNAG | 5 cut(s) | 11, 387, 879, 1079, 1178 |
| HpySE526I | ACGT | 1 cut(s) | 248 |
| Hsp92II | CATG | 8 cut(s) | 397, 406, 428, 661, 767, 809, 1209, 1264 |
| HspAI | GCGC | 1 cut(s) | 5 |
| KflI | GGGWCCC | 1 cut(s) | 511 |
| Kzo9I | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| LmnI | GCTCC | 6 cut(s) | 40, 62, 264, 643, 748, 872 |
| Lsp1109I | GCAGC | 5 cut(s) | 580, 862, 895, 1051, 1061 |
| LweI | GCATC | 3 cut(s) | 640, 1147, 1158 |
| MaeI | CTAG | 1 cut(s) | 894 |
| MaeII | ACGT | 1 cut(s) | 248 |
| MaeIII | GTNAC | 3 cut(s) | 536, 1133, 1226 |
| MalI | GATC | 6 cut(s) | 16, 259, 278, 372, 384, 524 |
| MbiI | CCGCTC | 1 cut(s) | 57 |
| MboI | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| MboII | GAAGA | 4 cut(s) | 171, 286, 555, 1118 |
| MflI | RGATCY | 2 cut(s) | 14, 522 |
| MhlI | GDGCHC | 1 cut(s) | 1260 |
| MluCI | AATT | 5 cut(s) | 118, 237, 282, 733, 770 |
| MlyI | GAGTC | 3 cut(s) | 410, 455, 1130 |
| MmeI | TCCRAC | 3 cut(s) | 84, 284, 901 |
| MseI | TTAA | 5 cut(s) | 219, 408, 492, 1004, 1194 |
| MspA1I | CMGCKG | 1 cut(s) | 647 |
| MspI | CCGG | 2 cut(s) | 171, 903 |
| MspR9I | CCNGG | 3 cut(s) | 202, 340, 529 |
| Mva1269I | GAATGC | 1 cut(s) | 1086 |
| MvaI | CCWGG | 3 cut(s) | 202, 340, 529 |
| MvnI | CGCG | 1 cut(s) | 972 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 32, 644, 749, 815, 914, 1172, 1271 |
| NdeII | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| NlaIII | CATG | 8 cut(s) | 397, 406, 428, 661, 767, 809, 1209, 1264 |
| NlaIV | GGNNCC | 2 cut(s) | 512, 513 |
| NmeAIII | GCCGAG | 1 cut(s) | 893 |
| NmuCI | GTSAC | 1 cut(s) | 1133 |
| NspI | RCATGY | 2 cut(s) | 406, 809 |
| NspV | TTCGAA | 1 cut(s) | 45 |
| PaeI | GCATGC | 1 cut(s) | 809 |
| PagI | TCATGA | 1 cut(s) | 763 |
| PasI | CCCWGGG | 1 cut(s) | 528 |
| PciI | ACATGT | 1 cut(s) | 402 |
| PctI | GAATGC | 1 cut(s) | 1086 |
| PfeI | GAWTC | 3 cut(s) | 288, 560, 760 |
| PinAI | ACCGGT | 1 cut(s) | 902 |
| PkrI | GCNGC | 8 cut(s) | 9, 28, 595, 877, 910, 1051, 1066, 1276 |
| PleI | GAGTC | 3 cut(s) | 410, 455, 1130 |
| PpsI | GAGTC | 3 cut(s) | 410, 455, 1130 |
| Ppu21I | YACGTR | 1 cut(s) | 249 |
| PpuMI | RGGWCCY | 1 cut(s) | 511 |
| PscI | ACATGT | 1 cut(s) | 402 |
| Psp5II | RGGWCCY | 1 cut(s) | 511 |
| Psp6I | CCWGG | 3 cut(s) | 200, 338, 527 |
| PspGI | CCWGG | 3 cut(s) | 200, 338, 527 |
| PspN4I | GGNNCC | 2 cut(s) | 512, 513 |
| PspPI | GGNCC | 5 cut(s) | 511, 839, 1073, 1143, 1246 |
| PspPPI | RGGWCCY | 1 cut(s) | 511 |
| PstI | CTGCAG | 1 cut(s) | 520 |
| PsuI | RGATCY | 2 cut(s) | 14, 522 |
| PvuII | CAGCTG | 1 cut(s) | 647 |
| RsaI | GTAC | 3 cut(s) | 392, 413, 727 |
| RsaNI | GTAC | 3 cut(s) | 391, 412, 726 |
| SalI | GTCGAC | 1 cut(s) | 1011 |
| SaqAI | TTAA | 5 cut(s) | 219, 408, 492, 1004, 1194 |
| SatI | GCNGC | 8 cut(s) | 8, 27, 594, 876, 909, 1050, 1065, 1275 |
| Sau3AI | GATC | 6 cut(s) | 14, 257, 276, 370, 382, 522 |
| Sau96I | GGNCC | 5 cut(s) | 511, 839, 1073, 1143, 1246 |
| SchI | GAGTC | 3 cut(s) | 410, 455, 1130 |
| ScrFI | CCNGG | 3 cut(s) | 202, 340, 529 |
| SduI | GDGCHC | 1 cut(s) | 1260 |
| SfaNI | GCATC | 3 cut(s) | 640, 1147, 1158 |
| SfcI | CTRYAG | 2 cut(s) | 516, 813 |
| SfuI | TTCGAA | 1 cut(s) | 45 |
| SinI | GGWCC | 3 cut(s) | 511, 1143, 1246 |
| SmlI | CTYRAG | 3 cut(s) | 584, 1016, 1138 |
| SmoI | CTYRAG | 3 cut(s) | 584, 1016, 1138 |
| SphI | GCATGC | 1 cut(s) | 809 |
| Sse9I | AATT | 5 cut(s) | 118, 237, 282, 733, 770 |
| SsiI | CCGC | 7 cut(s) | 24, 27, 55, 75, 81, 313, 970 |
| SspMI | CTAG | 1 cut(s) | 894 |
| StyD4I | CCNGG | 3 cut(s) | 200, 338, 527 |
| StyI | CCWWGG | 3 cut(s) | 468, 753, 1161 |
| TaaI | ACNGT | 3 cut(s) | 128, 802, 832 |
| TaiI | ACGT | 1 cut(s) | 251 |
| TaqI | TCGA | 3 cut(s) | 45, 783, 1012 |
| TasI | AATT | 5 cut(s) | 118, 237, 282, 733, 770 |
| TatI | WGTACW | 1 cut(s) | 390 |
| TauI | GCSGC | 1 cut(s) | 29 |
| TfiI | GAWTC | 3 cut(s) | 288, 560, 760 |
| Tru1I | TTAA | 5 cut(s) | 219, 408, 492, 1004, 1194 |
| Tru9I | TTAA | 5 cut(s) | 219, 408, 492, 1004, 1194 |
| TscAI | CASTG | 4 cut(s) | 274, 369, 454, 837 |
| TseFI | GTSAC | 1 cut(s) | 1133 |
| TseI | GCWGC | 7 cut(s) | 7, 593, 875, 908, 1049, 1064, 1274 |
| Tsp45I | GTSAC | 1 cut(s) | 1133 |
| TspDTI | ATGAA | 4 cut(s) | 752, 1119, 1194, 1233 |
| TspGWI | ACGGA | 1 cut(s) | 27 |
| TspRI | CASTG | 4 cut(s) | 274, 369, 454, 837 |
| VpaK11BI | GGWCC | 3 cut(s) | 511, 1143, 1246 |
| XapI | RAATTY | 2 cut(s) | 237, 770 |
| XceI | RCATGY | 2 cut(s) | 406, 809 |
| XmiI | GTMKAC | 1 cut(s) | 1012 |
| XspI | CTAG | 1 cut(s) | 894 |