Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16300 AT1G79530 |
| fragaria_vesca | FvH4_3g14640 |
| malus_domestica | MD05G1234400.v1.1 MD10G1210900.v1.1 |
| prunus_persica | Prupe.4G131700_v2.0.a1 Prupe.4G131700_v2.0.a1 |
| pyrus_communis | pycom05g21170 pycom10g17920 pycom10g17930 |
| rosa_chinensis | RchiOBHm_Chr5g0024101 |
| rosa_laevigata | RLG00000032770 |
| rosa_multiflora | Rmu_sc0020340.1_g000003 Rmu_sc0026565.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00055140 Rroxscaffold_1G00055670 |
| rosa_rugosa | Rorug05G0081300 |
| rosa_samantha | Rh5AG172200 Rh5BG168700 Rh5CG184500 Rh5DG171000 |
| rosa_wichuraiana | Rw0G003230 Rw5G015540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 202 |
| AclWI | GGATC | 2 cut(s) | 55, 115 |
| AflIII | ACRYGT | 1 cut(s) | 9 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| AlwI | GGATC | 2 cut(s) | 55, 115 |
| AsuHPI | GGTGA | 1 cut(s) | 154 |
| BccI | CCATC | 1 cut(s) | 38 |
| BisI | GCNGC | 1 cut(s) | 203 |
| BlsI | GCNGC | 1 cut(s) | 204 |
| BpuEI | CTTGAG | 1 cut(s) | 214 |
| Bsa29I | ATCGAT | 2 cut(s) | 50, 119 |
| BsaJI | CCNNGG | 2 cut(s) | 75, 136 |
| BseCI | ATCGAT | 2 cut(s) | 50, 119 |
| BseDI | CCNNGG | 2 cut(s) | 75, 136 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseMII | CTCAG | 1 cut(s) | 119 |
| BshVI | ATCGAT | 2 cut(s) | 50, 119 |
| Bsp143I | GATC | 3 cut(s) | 47, 116, 120 |
| BspACI | CCGC | 1 cut(s) | 202 |
| BspCNI | CTCAG | 1 cut(s) | 120 |
| BspDI | ATCGAT | 2 cut(s) | 50, 119 |
| BspPI | GGATC | 2 cut(s) | 55, 115 |
| BssECI | CCNNGG | 2 cut(s) | 75, 136 |
| BssMI | GATC | 3 cut(s) | 47, 116, 120 |
| BssT1I | CCWWGG | 2 cut(s) | 75, 136 |
| BstDEI | CTNAG | 1 cut(s) | 128 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstKTI | GATC | 3 cut(s) | 50, 119, 123 |
| BstMBI | GATC | 3 cut(s) | 47, 116, 120 |
| BstNSI | RCATGY | 1 cut(s) | 13 |
| Bsu15I | ATCGAT | 2 cut(s) | 50, 119 |
| BsuTUI | ATCGAT | 2 cut(s) | 50, 119 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| ClaI | ATCGAT | 2 cut(s) | 50, 119 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 215 |
| CviAII | CATG | 2 cut(s) | 10, 32 |
| CviJI | RGCY | 1 cut(s) | 5 |
| CviKI_1 | RGCY | 1 cut(s) | 5 |
| DdeI | CTNAG | 1 cut(s) | 128 |
| DpnI | GATC | 3 cut(s) | 49, 118, 122 |
| DpnII | GATC | 3 cut(s) | 47, 116, 120 |
| Eco130I | CCWWGG | 2 cut(s) | 75, 136 |
| EcoT14I | CCWWGG | 2 cut(s) | 75, 136 |
| ErhI | CCWWGG | 2 cut(s) | 75, 136 |
| FaeI | CATG | 2 cut(s) | 13, 35 |
| FaiI | YATR | 5 cut(s) | 11, 33, 149, 161, 212 |
| FatI | CATG | 2 cut(s) | 9, 31 |
| Fnu4HI | GCNGC | 1 cut(s) | 203 |
| FokI | GGATG | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 1 cut(s) | 203 |
| GluI | GCNGC | 1 cut(s) | 203 |
| Hin1II | CATG | 2 cut(s) | 13, 35 |
| HinfI | GANTC | 4 cut(s) | 23, 68, 132, 169 |
| HphI | GGTGA | 1 cut(s) | 154 |
| HpyAV | CCTTC | 2 cut(s) | 85, 192 |
| HpyCH4V | TGCA | 1 cut(s) | 226 |
| HpyF3I | CTNAG | 1 cut(s) | 128 |
| Hsp92II | CATG | 2 cut(s) | 13, 35 |
| Kzo9I | GATC | 3 cut(s) | 47, 116, 120 |
| LpnPI | CCDG | 2 cut(s) | 137, 161 |
| MalI | GATC | 3 cut(s) | 49, 118, 122 |
| MboI | GATC | 3 cut(s) | 47, 116, 120 |
| MboII | GAAGA | 1 cut(s) | 164 |
| MlyI | GAGTC | 1 cut(s) | 17 |
| MseI | TTAA | 1 cut(s) | 15 |
| NdeII | GATC | 3 cut(s) | 47, 116, 120 |
| NlaIII | CATG | 2 cut(s) | 13, 35 |
| NspI | RCATGY | 1 cut(s) | 13 |
| PciI | ACATGT | 1 cut(s) | 9 |
| PfeI | GAWTC | 3 cut(s) | 68, 132, 169 |
| PkrI | GCNGC | 1 cut(s) | 204 |
| PleI | GAGTC | 1 cut(s) | 17 |
| PpsI | GAGTC | 1 cut(s) | 17 |
| PscI | ACATGT | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 15 |
| SatI | GCNGC | 1 cut(s) | 203 |
| Sau3AI | GATC | 3 cut(s) | 47, 116, 120 |
| SchI | GAGTC | 1 cut(s) | 17 |
| SetI | ASST | 1 cut(s) | 77 |
| SgeI | CNNG | 7 cut(s) | 22, 44, 88, 136, 149, 188, 205 |
| SmlI | CTYRAG | 1 cut(s) | 193 |
| SmoI | CTYRAG | 1 cut(s) | 193 |
| SsiI | CCGC | 1 cut(s) | 202 |
| SspI | AATATT | 1 cut(s) | 39 |
| StyI | CCWWGG | 2 cut(s) | 75, 136 |
| TaqI | TCGA | 2 cut(s) | 50, 119 |
| TauI | GCSGC | 1 cut(s) | 205 |
| TfiI | GAWTC | 3 cut(s) | 68, 132, 169 |
| Tru1I | TTAA | 1 cut(s) | 15 |
| Tru9I | TTAA | 1 cut(s) | 15 |
| XceI | RCATGY | 1 cut(s) | 13 |