Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008206

Physical Location & Seq

Genomic Coordinates Forward (+)

76590931 .. 76595587

Gene Structure 4657 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00055140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGAAAAAGCCCAAAAAAGCTCACACGAGTCCGACGTGGCTTTCGAGGAGTACGCGACCTTTCCTCCTCTGCCCGCCACGTCACGACAAAACCACCTACGCGATTCTCACAGCCTGTCATCCCCTGCTTGCAGCCCCACCGCAACACCAACCTCCACACCCCATCCGCCGTCCATCTTCTTTAACCTAAAATTCGAACGGCTCAAAATTGCTAGTATATTCATAACTGCAGCAGGGGATCGAAACCTCGTGTCAAGCGTTGGGTTTGGGCGCAATCTGAACTGTTCAAAGGTGCAATCATCTATCTTTGGGGCTTCTATCTCAACCGCGTCGTCTTCTTTACAGTTGAGTAATCGGCTTTCGACAAGTAGCGCCAGGAGTGTCCAGCCCATTAAAGCAACAGCCACCGAACTTCCACCCACGATTCAGAGATCAGGGAGTAGTGGGAAGATCAAAGTTGGAATCAATGGTTTTGGTCGGATTGGGCGGTTGGTTCTACGGATAGCGACCGCCAGGGATGATATAGAAGTGGTGGCAGTGAATGATCCTTTAGTTGATGCTAAGTACATGGCTTACATGTTTAAGTATGACTCTACACATGGGGTGTTTGATGGATCTATTAGTGTTGTGGACGGGTCCACCTTGGAAATAAATGGGAAGCAGATTAAAGTTGAGAGCAAAAGGGACCCTGCTGAGATCCCCTGGGGAAGTTATGGGGTGGAGTATGTAGTGGAATCTTCTGGGATTTTCACCACTCTCGATAAGGCTGCATTACATAAAAAGGGTGGTGCAAAGAAAGTGGTGATTCATGAGGAATTTGGTATTCTTGAAGGTTTGATGACGACTGTGCATGCAACTACAGCAACACAAAAAACAGTTGATGGCCCATCAAGGAAGGACTGGAGAGGTGGCCGAGGAGCTGCACAGAATATCATTCCTAGTTCAACTGGTGCTGCAAAGGCTGTTGGTAAAGTTCTACCTGAACTCAATGGAAAGCTTACTGGAATGGCCTTCCGTGTCCCGACTCCTAATGTATCTGTTGTGGACTTAACTTGTCGACTTGAGAAGAGTTCTTCTTATGAGGATATCAAAGCTGCCATCAGGTATGCTGCTGATGGACCACTTAGAGGCATTCTTGGATACACCGATGAAGATGTGGTTTCCAATGATTTTGTTGGTGACTCAAGGTCCAGTATCTTTGATGCCAAGGCTGGATTAGCACTTAGTTCCTCCTTTGTTAAGCTTGTTTCGTGGTATGACAATGAATGGGGTTACAGCAACCGAGTTTTGGATCTCATAGAGCACATGGCATTGGTGGTAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004365 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0007275 GO:0008150 GO:0008152 GO:0008270 GO:0009536 GO:0009555 GO:0009719 GO:0009725 GO:0009735 GO:0009791 GO:0009908 GO:0010033 GO:0016020 GO:0016491 GO:0016620 GO:0016903 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0042221 GO:0042592 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043891 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0048229 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050801 GO:0050896 GO:0055081 GO:0055114 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0080022 GO:0080144 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04066 ko05010 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map04066 map05010

Pfam Domains

Protein Families

Gp_dh_C Gp_dh_N

Protein Analysis

441

Amino Acids

47.28

Weight (kDa)

8.74

Isoelectric Point (pI)

39.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gp_dh_N	PF00044	151 - 252	6.8e-38	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C	PF02800	268 - 419	1.1e-65	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008206)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16300 AT1G79530
fragaria_vesca	FvH4_3g14640
malus_domestica	MD05G1234400.v1.1 MD10G1210900.v1.1
prunus_persica	Prupe.4G131700_v2.0.a1 Prupe.4G131700_v2.0.a1
pyrus_communis	pycom05g21170 pycom10g17920 pycom10g17930
rosa_chinensis	RchiOBHm_Chr5g0024101
rosa_laevigata	RLG00000032770
rosa_multiflora	Rmu_sc0020340.1_g000003 Rmu_sc0026565.1_g000003
rosa_roxburghii	Rroxscaffold_1G00055140 Rroxscaffold_1G00055670
rosa_rugosa	Rorug05G0081300
rosa_samantha	Rh5AG172200 Rh5BG168700 Rh5CG184500 Rh5DG171000
rosa_wichuraiana	Rw0G003230 Rw5G015540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1057
AccII	CGCG	3 cut(s)	56, 102, 329
AciI	CCGC	6 cut(s)	75, 141, 167, 327, 487, 510
AclWI	GGATC	5 cut(s)	246, 539, 622, 691, 1299
AcoI	YGGCCR	1 cut(s)	910
AcsI	RAATTY	2 cut(s)	191, 815
AfaI	GTAC	2 cut(s)	53, 566
AfiI	CCNNNNNNNGG	2 cut(s)	1127, 1288
AflIII	ACRYGT	1 cut(s)	576
AgsI	TTSAA	3 cut(s)	288, 830, 945
AhdI	GACNNNNNGTC	1 cut(s)	1186
AjiI	CACGTC	2 cut(s)	37, 81
AjnI	CCWGG	3 cut(s)	374, 512, 701
AluBI	AGCT	5 cut(s)	21, 920, 997, 1094, 1243
AluI	AGCT	5 cut(s)	21, 920, 997, 1094, 1243
Alw21I	GWGCWC	1 cut(s)	1305
AlwI	GGATC	5 cut(s)	246, 539, 622, 691, 1299
AoxI	GGCC	3 cut(s)	883, 910, 1008
ApeKI	GCWGC	7 cut(s)	132, 230, 767, 920, 953, 1094, 1109
ApoI	RAATTY	2 cut(s)	191, 815
ArsI	GACNNNNNNTTYG	2 cut(s)	26, 58
AspLEI	GCGC	2 cut(s)	273, 374
AspS9I	GGNCC	5 cut(s)	636, 685, 884, 1118, 1188
AsuHPI	GGTGA	3 cut(s)	742, 814, 1190
AsuII	TTCGAA	1 cut(s)	195
AvaII	GGWCC	4 cut(s)	636, 685, 1118, 1188
BauI	CACGAG	2 cut(s)	26, 248
BbsI	GAAGAC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	1305
BbvI	GCAGC	7 cut(s)	144, 242, 754, 907, 940, 1081, 1096
BccI	CCATC	7 cut(s)	171, 182, 605, 875, 895, 1106, 1109
BceAI	ACGGC	2 cut(s)	154, 215
BcgI	CGANNNNNNTGC	2 cut(s)	749, 783
BciT130I	CCWGG	3 cut(s)	376, 514, 703
BciVI	GTATCC	1 cut(s)	1133
BfaI	CTAG	2 cut(s)	213, 939
BfmI	CTRYAG	2 cut(s)	228, 858
BfoI	RGCGCY	1 cut(s)	375
BfuI	GTATCC	1 cut(s)	1133
BisI	GCNGC	7 cut(s)	133, 231, 768, 921, 954, 1095, 1110
BlsI	GCNGC	7 cut(s)	134, 232, 769, 922, 955, 1096, 1111
Bme1390I	CCNGG	3 cut(s)	376, 514, 703
Bme18I	GGWCC	4 cut(s)	636, 685, 1118, 1188
BmeRI	GACNNNNNGTC	1 cut(s)	1186
BmgBI	CACGTC	2 cut(s)	37, 81
BmgT120I	GGNCC	5 cut(s)	636, 685, 884, 1118, 1188
BmiI	GGNNCC	3 cut(s)	637, 686, 687
BmrFI	CCNGG	3 cut(s)	376, 514, 703
BmsI	GCATC	2 cut(s)	547, 1192
BpiI	GAAGAC	1 cut(s)	327
BpmI	CTGGAG	1 cut(s)	922
Bpu14I	TTCGAA	1 cut(s)	195
BpuEI	CTTGAG	2 cut(s)	1082, 1168
BsaJI	CCNNGG	6 cut(s)	513, 642, 701, 702, 913, 1206
BsaXI	ACNNNNNCTCC	2 cut(s)	49, 79
Bsc4I	CCNNNNNNNGG	2 cut(s)	1127, 1288
Bse1I	ACTGG	4 cut(s)	905, 952, 1006, 1191
BseBI	CCWGG	3 cut(s)	376, 514, 703
BseDI	CCNNGG	6 cut(s)	513, 642, 701, 702, 913, 1206
BseGI	GGATG	3 cut(s)	119, 163, 523
BseLI	CCNNNNNNNGG	2 cut(s)	1127, 1288
BseMII	CTCAG	1 cut(s)	684
BseNI	ACTGG	4 cut(s)	905, 952, 1006, 1191
BseRI	GAGGAG	3 cut(s)	57, 62, 930
BseXI	GCAGC	7 cut(s)	144, 242, 754, 907, 940, 1081, 1096
BsgI	GTGCAG	1 cut(s)	906
Bsh1236I	CGCG	3 cut(s)	56, 102, 329
Bsh1285I	CGRYCG	1 cut(s)	510
BshFI	GGCC	3 cut(s)	885, 912, 1010
BsiEI	CGRYCG	1 cut(s)	510
BsiHKAI	GWGCWC	1 cut(s)	1305
BslFI	GGGAC	2 cut(s)	698, 1004
BslI	CCNNNNNNNGG	2 cut(s)	1127, 1288
BsmFI	GGGAC	2 cut(s)	698, 1004
BsmI	GAATGC	1 cut(s)	1131
BsnI	GGCC	3 cut(s)	885, 912, 1010
Bsp119I	TTCGAA	1 cut(s)	195
Bsp1286I	GDGCHC	1 cut(s)	1305
Bsp143I	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
BspACI	CCGC	6 cut(s)	75, 141, 167, 327, 487, 510
BspANI	GGCC	3 cut(s)	885, 912, 1010
BspCNI	CTCAG	1 cut(s)	685
BspFNI	CGCG	3 cut(s)	56, 102, 329
BspHI	TCATGA	1 cut(s)	808
BspLI	GGNNCC	3 cut(s)	637, 686, 687
BspMAI	CTGCAG	1 cut(s)	232
BspPI	GGATC	5 cut(s)	246, 539, 622, 691, 1299
BspT104I	TTCGAA	1 cut(s)	195
BsrI	ACTGG	4 cut(s)	905, 952, 1006, 1191
BssECI	CCNNGG	6 cut(s)	513, 642, 701, 702, 913, 1206
BssMI	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
BssSI	CACGAG	2 cut(s)	26, 248
BssT1I	CCWWGG	2 cut(s)	642, 1206
Bst2BI	CACGAG	2 cut(s)	26, 248
Bst2UI	CCWGG	3 cut(s)	376, 514, 703
Bst4CI	ACNGT	4 cut(s)	284, 345, 847, 877
Bst6I	CTCTTC	1 cut(s)	1061
BstBI	TTCGAA	1 cut(s)	195
BstC8I	GCNNGC	3 cut(s)	75, 130, 852
BstDEI	CTNAG	4 cut(s)	561, 693, 1124, 1223
BstF5I	GGATG	3 cut(s)	119, 163, 523
BstFNI	CGCG	3 cut(s)	56, 102, 329
BstH2I	RGCGCY	1 cut(s)	375
BstHHI	GCGC	2 cut(s)	273, 374
BstKTI	GATC	7 cut(s)	241, 434, 453, 547, 617, 699, 1294
BstMBI	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
BstMCI	CGRYCG	1 cut(s)	510
BstMWI	GCNNNNNNNGC	3 cut(s)	860, 959, 1217
BstNI	CCWGG	3 cut(s)	376, 514, 703
BstNSI	RCATGY	2 cut(s)	580, 854
BstSCI	CCNGG	3 cut(s)	374, 512, 701
BstSFI	CTRYAG	2 cut(s)	228, 858
BstUI	CGCG	3 cut(s)	56, 102, 329
BstV1I	GCAGC	7 cut(s)	144, 242, 754, 907, 940, 1081, 1096
BstV2I	GAAGAC	1 cut(s)	327
BstX2I	RGATCY	3 cut(s)	614, 696, 1291
BstYI	RGATCY	3 cut(s)	614, 696, 1291
BsuI	GTATCC	1 cut(s)	1133
BsuRI	GGCC	3 cut(s)	885, 912, 1010
BtrI	CACGTC	2 cut(s)	37, 81
BtsCI	GGATG	3 cut(s)	119, 163, 523
BtsI	GCAGTG	1 cut(s)	543
BtsIMutI	CAGTG	1 cut(s)	543
Cac8I	GCNNGC	3 cut(s)	75, 130, 852
CciI	TCATGA	1 cut(s)	808
CfoI	GCGC	2 cut(s)	273, 374
Cfr13I	GGNCC	5 cut(s)	636, 685, 884, 1118, 1188
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	2 cut(s)	52, 565
CspCI	CAANNNNNGTGG	2 cut(s)	780, 815
CviAII	CATG	6 cut(s)	568, 577, 599, 809, 851, 1306
CviQI	GTAC	2 cut(s)	52, 565
DdeI	CTNAG	4 cut(s)	561, 693, 1124, 1223
DpnI	GATC	7 cut(s)	240, 433, 452, 546, 616, 698, 1293
DpnII	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
DriI	GACNNNNNGTC	1 cut(s)	1186
EaeI	YGGCCR	1 cut(s)	910
Eam1104I	CTCTTC	1 cut(s)	1061
Eam1105I	GACNNNNNGTC	1 cut(s)	1186
EarI	CTCTTC	1 cut(s)	1061
EciI	GGCGGA	1 cut(s)	156
Eco130I	CCWWGG	2 cut(s)	642, 1206
Eco32I	GATATC	1 cut(s)	1087
Eco47I	GGWCC	4 cut(s)	636, 685, 1118, 1188
EcoO109I	RGGNCCY	1 cut(s)	685
EcoRII	CCWGG	3 cut(s)	374, 512, 701
EcoRV	GATATC	1 cut(s)	1087
EcoT14I	CCWWGG	2 cut(s)	642, 1206
ErhI	CCWWGG	2 cut(s)	642, 1206
FaeI	CATG	6 cut(s)	571, 580, 602, 812, 854, 1309
FaqI	GGGAC	2 cut(s)	698, 1004
FatI	CATG	6 cut(s)	567, 576, 598, 808, 850, 1305
FauI	CCCGC	1 cut(s)	82
FblI	GTMKAC	1 cut(s)	1057
Fnu4HI	GCNGC	7 cut(s)	133, 231, 768, 921, 954, 1095, 1110
FokI	GGATG	3 cut(s)	106, 150, 530
Fsp4HI	GCNGC	7 cut(s)	133, 231, 768, 921, 954, 1095, 1110
FspBI	CTAG	2 cut(s)	213, 939
GlaI	GCGC	2 cut(s)	272, 373
GluI	GCNGC	7 cut(s)	133, 231, 768, 921, 954, 1095, 1110
GsuI	CTGGAG	1 cut(s)	922
HaeII	RGCGCY	1 cut(s)	375
HaeIII	GGCC	3 cut(s)	885, 912, 1010
HgaI	GACGC	1 cut(s)	318
HhaI	GCGC	2 cut(s)	273, 374
Hin1II	CATG	6 cut(s)	571, 580, 602, 812, 854, 1309
Hin6I	GCGC	2 cut(s)	271, 372
HinP1I	GCGC	2 cut(s)	271, 372
HincII	GTYRAC	1 cut(s)	1058
HindII	GTYRAC	1 cut(s)	1058
HindIII	AAGCTT	2 cut(s)	995, 1241
HinfI	GANTC	9 cut(s)	29, 104, 424, 462, 590, 734, 805, 1024, 1181
HphI	GGTGA	3 cut(s)	742, 814, 1190
Hpy166II	GTNNAC	4 cut(s)	631, 639, 1045, 1058
Hpy188I	TCNGA	4 cut(s)	34, 279, 429, 480
Hpy188III	TCNNGA	5 cut(s)	84, 758, 809, 827, 1021
Hpy8I	GTNNAC	4 cut(s)	631, 639, 1045, 1058
Hpy99I	CGWCG	2 cut(s)	38, 334
HpyAV	CCTTC	3 cut(s)	824, 889, 1021
HpyCH4III	ACNGT	4 cut(s)	284, 345, 847, 877
HpyCH4IV	ACGT	2 cut(s)	36, 80
HpyCH4V	TGCA	9 cut(s)	132, 230, 295, 770, 791, 850, 854, 923, 956
HpyF10VI	GCNNNNNNNGC	3 cut(s)	860, 959, 1217
HpyF3I	CTNAG	4 cut(s)	561, 693, 1124, 1223
HpySE526I	ACGT	2 cut(s)	36, 80
Hsp92II	CATG	6 cut(s)	571, 580, 602, 812, 854, 1309
HspAI	GCGC	2 cut(s)	271, 372
KflI	GGGWCCC	1 cut(s)	685
Kzo9I	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
LmnI	GCTCC	1 cut(s)	917
Lsp1109I	GCAGC	7 cut(s)	144, 242, 754, 907, 940, 1081, 1096
LweI	GCATC	2 cut(s)	547, 1192
MaeI	CTAG	2 cut(s)	213, 939
MaeII	ACGT	2 cut(s)	36, 80
MaeIII	GTNAC	3 cut(s)	81, 1178, 1271
MalI	GATC	7 cut(s)	240, 433, 452, 546, 616, 698, 1293
MboI	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
MboII	GAAGA	7 cut(s)	169, 327, 460, 729, 1065, 1078, 1163
MflI	RGATCY	3 cut(s)	614, 696, 1291
MhlI	GDGCHC	1 cut(s)	1305
MluCI	AATT	3 cut(s)	191, 207, 815
MlyI	GAGTC	4 cut(s)	38, 584, 1018, 1175
MmeI	TCCRAC	3 cut(s)	57, 439, 458
MseI	TTAA	6 cut(s)	183, 393, 582, 666, 1049, 1239
MspR9I	CCNGG	3 cut(s)	376, 514, 703
Mva1269I	GAATGC	1 cut(s)	1131
MvaI	CCWGG	3 cut(s)	376, 514, 703
MvnI	CGCG	3 cut(s)	56, 102, 329
MwoI	GCNNNNNNNGC	3 cut(s)	860, 959, 1217
NdeII	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
NlaIII	CATG	6 cut(s)	571, 580, 602, 812, 854, 1309
NlaIV	GGNNCC	3 cut(s)	637, 686, 687
NmeAIII	GCCGAG	1 cut(s)	938
NmuCI	GTSAC	2 cut(s)	81, 1178
NspI	RCATGY	2 cut(s)	580, 854
NspV	TTCGAA	1 cut(s)	195
PaeI	GCATGC	1 cut(s)	854
PagI	TCATGA	1 cut(s)	808
PasI	CCCWGGG	1 cut(s)	702
PciI	ACATGT	1 cut(s)	576
PcsI	WCGNNNNNNNCGW	3 cut(s)	33, 42, 255
PctI	GAATGC	1 cut(s)	1131
PfeI	GAWTC	5 cut(s)	104, 424, 462, 734, 805
PkrI	GCNGC	7 cut(s)	134, 232, 769, 922, 955, 1096, 1111
PleI	GAGTC	4 cut(s)	37, 584, 1018, 1175
PpsI	GAGTC	4 cut(s)	37, 584, 1018, 1175
PpuMI	RGGWCCY	1 cut(s)	685
PscI	ACATGT	1 cut(s)	576
Psp5II	RGGWCCY	1 cut(s)	685
Psp6I	CCWGG	3 cut(s)	374, 512, 701
PspGI	CCWGG	3 cut(s)	374, 512, 701
PspN4I	GGNNCC	3 cut(s)	637, 686, 687
PspPI	GGNCC	5 cut(s)	636, 685, 884, 1118, 1188
PspPPI	RGGWCCY	1 cut(s)	685
PstI	CTGCAG	1 cut(s)	232
PsuI	RGATCY	3 cut(s)	614, 696, 1291
RsaI	GTAC	2 cut(s)	53, 566
RsaNI	GTAC	2 cut(s)	52, 565
SalI	GTCGAC	1 cut(s)	1056
SaqAI	TTAA	6 cut(s)	183, 393, 582, 666, 1049, 1239
SatI	GCNGC	7 cut(s)	133, 231, 768, 921, 954, 1095, 1110
Sau3AI	GATC	7 cut(s)	238, 431, 450, 544, 614, 696, 1291
Sau96I	GGNCC	5 cut(s)	636, 685, 884, 1118, 1188
SchI	GAGTC	4 cut(s)	38, 584, 1018, 1175
ScrFI	CCNGG	3 cut(s)	376, 514, 703
SduI	GDGCHC	1 cut(s)	1305
SfaNI	GCATC	2 cut(s)	547, 1192
SfcI	CTRYAG	2 cut(s)	228, 858
SfuI	TTCGAA	1 cut(s)	195
SinI	GGWCC	4 cut(s)	636, 685, 1118, 1188
SmlI	CTYRAG	2 cut(s)	1061, 1183
SmoI	CTYRAG	2 cut(s)	1061, 1183
SphI	GCATGC	1 cut(s)	854
Sse9I	AATT	3 cut(s)	191, 207, 815
SsiI	CCGC	6 cut(s)	75, 141, 167, 327, 487, 510
SspMI	CTAG	2 cut(s)	213, 939
StyD4I	CCNGG	3 cut(s)	374, 512, 701
StyI	CCWWGG	2 cut(s)	642, 1206
TaaI	ACNGT	4 cut(s)	284, 345, 847, 877
TaiI	ACGT	2 cut(s)	39, 83
TaqI	TCGA	6 cut(s)	45, 195, 241, 362, 759, 1057
TasI	AATT	3 cut(s)	191, 207, 815
TatI	WGTACW	1 cut(s)	564
TfiI	GAWTC	5 cut(s)	104, 424, 462, 734, 805
Tru1I	TTAA	6 cut(s)	183, 393, 582, 666, 1049, 1239
Tru9I	TTAA	6 cut(s)	183, 393, 582, 666, 1049, 1239
TscAI	CASTG	1 cut(s)	543
TseFI	GTSAC	2 cut(s)	81, 1178
TseI	GCWGC	7 cut(s)	132, 230, 767, 920, 953, 1094, 1109
Tsp45I	GTSAC	2 cut(s)	81, 1178
TspDTI	ATGAA	4 cut(s)	211, 797, 1164, 1278
TspGWI	ACGGA	2 cut(s)	514, 1004
TspRI	CASTG	1 cut(s)	543
VpaK11BI	GGWCC	4 cut(s)	636, 685, 1118, 1188
XapI	RAATTY	2 cut(s)	191, 815
XceI	RCATGY	2 cut(s)	580, 854
XmiI	GTMKAC	1 cut(s)	1057
XspI	CTAG	2 cut(s)	213, 939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.