3-deoxy-manno-octulosonate cytidylyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53000 AT1G53000 |
| fragaria_vesca | FvH4_3g20180 FvH4_3g20180 FvH4_3g20180 |
| malus_domestica | MD03G1226400.v1.1 MD11G1244700.v1.1 |
| prunus_persica | Prupe.4G047000_v2.0.a1 Prupe.4G047000_v2.0.a1 Prupe.4G183000_v2.0.a1 Prupe.4G183000_v2.0.a1 |
| pyrus_communis | pycom03g17410 pycom11g21680 |
| rosa_chinensis | RchiOBHm_Chr5g0008351 RchiOBHm_Chr5g0033991 |
| rosa_laevigata | RLG00000033517 |
| rosa_multiflora | Rmu_sc0012341.1_g000007 Rmu_sc0014753.1_g000003 Rmu_sc0021840.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00046240 Rroxscaffold_1G00068140 |
| rosa_rugosa | Rorug04G0435400 Rorug04G0435400 Rorug05G0144000 |
| rosa_samantha | Rh5AG063900 Rh5AG234900 Rh5BG060800 Rh5BG235700 Rh5CG070800 Rh5CG265500 Rh5DG059800 |
| rosa_wichuraiana | Rw5G005710 Rw5G021470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 370 |
| AccB1I | GGYRCC | 1 cut(s) | 122 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 72 |
| AccI | GTMKAC | 1 cut(s) | 825 |
| AccII | CGCG | 1 cut(s) | 113 |
| AccIII | TCCGGA | 1 cut(s) | 156 |
| AciI | CCGC | 6 cut(s) | 63, 111, 113, 183, 537, 668 |
| AclWI | GGATC | 6 cut(s) | 83, 223, 241, 297, 566, 631 |
| AcoI | YGGCCR | 1 cut(s) | 114 |
| AcsI | RAATTY | 1 cut(s) | 696 |
| AcuI | CTGAAG | 2 cut(s) | 761, 876 |
| AcyI | GRCGYC | 1 cut(s) | 123 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 72, 163 |
| AgsI | TTSAA | 5 cut(s) | 413, 473, 560, 627, 794 |
| AjiI | CACGTC | 1 cut(s) | 546 |
| AjnI | CCWGG | 2 cut(s) | 125, 135 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 28 |
| AluBI | AGCT | 7 cut(s) | 350, 418, 503, 705, 739, 781, 878 |
| AluI | AGCT | 7 cut(s) | 350, 418, 503, 705, 739, 781, 878 |
| AlwI | GGATC | 6 cut(s) | 83, 223, 241, 297, 566, 631 |
| Aor13HI | TCCGGA | 1 cut(s) | 156 |
| AoxI | GGCC | 4 cut(s) | 114, 129, 139, 660 |
| ApaI | GGGCCC | 1 cut(s) | 143 |
| ApeKI | GCWGC | 1 cut(s) | 778 |
| ApoI | RAATTY | 1 cut(s) | 696 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 408 |
| AspLEI | GCGC | 1 cut(s) | 125 |
| AspS9I | GGNCC | 4 cut(s) | 57, 129, 139, 140 |
| AsuC2I | CCSGG | 3 cut(s) | 55, 164, 518 |
| AsuHPI | GGTGA | 1 cut(s) | 826 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BaeGI | GKGCMC | 1 cut(s) | 143 |
| BanI | GGYRCC | 1 cut(s) | 122 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| BbvI | GCAGC | 1 cut(s) | 790 |
| BccI | CCATC | 3 cut(s) | 482, 623, 696 |
| BciT130I | CCWGG | 2 cut(s) | 127, 137 |
| BclI | TGATCA | 1 cut(s) | 816 |
| BcnI | CCSGG | 3 cut(s) | 55, 164, 518 |
| BfaI | CTAG | 2 cut(s) | 692, 761 |
| BfmI | CTRYAG | 2 cut(s) | 334, 506 |
| BfoI | RGCGCY | 1 cut(s) | 126 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 384 |
| BglII | AGATCT | 1 cut(s) | 769 |
| BisI | GCNGC | 3 cut(s) | 111, 114, 779 |
| BlsI | GCNGC | 3 cut(s) | 112, 115, 780 |
| Bme1390I | CCNGG | 5 cut(s) | 55, 127, 137, 164, 518 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmgBI | CACGTC | 1 cut(s) | 546 |
| BmgT120I | GGNCC | 4 cut(s) | 57, 129, 139, 140 |
| BmiI | GGNNCC | 4 cut(s) | 58, 124, 141, 161 |
| BmrFI | CCNGG | 5 cut(s) | 55, 127, 137, 164, 518 |
| BmsI | GCATC | 5 cut(s) | 183, 287, 511, 553, 575 |
| BpmI | CTGGAG | 1 cut(s) | 794 |
| BpuEI | CTTGAG | 1 cut(s) | 440 |
| BpuMI | CCSGG | 3 cut(s) | 55, 164, 518 |
| BsaBI | GATNNNNATC | 1 cut(s) | 576 |
| BsaHI | GRCGYC | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 7 cut(s) | 66, 82, 111, 126, 136, 232, 516 |
| BsaWI | WCCGGW | 1 cut(s) | 156 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 339, 369 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 72, 163 |
| Bse3DI | GCAATG | 1 cut(s) | 105 |
| Bse8I | GATNNNNATC | 1 cut(s) | 576 |
| BseAI | TCCGGA | 1 cut(s) | 156 |
| BseBI | CCWGG | 2 cut(s) | 127, 137 |
| BseDI | CCNNGG | 7 cut(s) | 66, 82, 111, 126, 136, 232, 516 |
| BseGI | GGATG | 3 cut(s) | 50, 316, 526 |
| BseJI | GATNNNNATC | 1 cut(s) | 576 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 72, 163 |
| BseMI | GCAATG | 1 cut(s) | 105 |
| BseMII | CTCAG | 2 cut(s) | 381, 381 |
| BseRI | GAGGAG | 1 cut(s) | 34 |
| BseSI | GKGCMC | 1 cut(s) | 143 |
| BseXI | GCAGC | 1 cut(s) | 790 |
| Bsh1236I | CGCG | 1 cut(s) | 113 |
| BshFI | GGCC | 4 cut(s) | 116, 131, 141, 662 |
| BshNI | GGYRCC | 1 cut(s) | 122 |
| BsiSI | CCGG | 5 cut(s) | 54, 96, 157, 163, 518 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 72, 163 |
| BsmI | GAATGC | 1 cut(s) | 335 |
| BsnI | GGCC | 4 cut(s) | 116, 131, 141, 662 |
| Bsp120I | GGGCCC | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp13I | TCCGGA | 1 cut(s) | 156 |
| Bsp143I | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| BspACI | CCGC | 6 cut(s) | 63, 111, 113, 183, 537, 668 |
| BspANI | GGCC | 4 cut(s) | 116, 131, 141, 662 |
| BspCNI | CTCAG | 2 cut(s) | 380, 382 |
| BspEI | TCCGGA | 1 cut(s) | 156 |
| BspFNI | CGCG | 1 cut(s) | 113 |
| BspLI | GGNNCC | 4 cut(s) | 58, 124, 141, 161 |
| BspMAI | CTGCAG | 1 cut(s) | 510 |
| BspPI | GGATC | 6 cut(s) | 83, 223, 241, 297, 566, 631 |
| BspT107I | GGYRCC | 1 cut(s) | 122 |
| BsrDI | GCAATG | 1 cut(s) | 105 |
| BssECI | CCNNGG | 7 cut(s) | 66, 82, 111, 126, 136, 232, 516 |
| BssMI | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| BssNI | GRCGYC | 1 cut(s) | 123 |
| BssT1I | CCWWGG | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 2 cut(s) | 127, 137 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstACI | GRCGYC | 1 cut(s) | 123 |
| BstDEI | CTNAG | 2 cut(s) | 367, 390 |
| BstDSI | CCRYGG | 2 cut(s) | 82, 111 |
| BstF5I | GGATG | 3 cut(s) | 50, 316, 526 |
| BstFNI | CGCG | 1 cut(s) | 113 |
| BstH2I | RGCGCY | 1 cut(s) | 126 |
| BstHHI | GCGC | 1 cut(s) | 125 |
| BstKTI | GATC | 8 cut(s) | 78, 231, 249, 292, 574, 639, 772, 819 |
| BstMBI | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 101, 110, 122, 191, 275, 384, 521 |
| BstNI | CCWGG | 2 cut(s) | 127, 137 |
| BstSCI | CCNGG | 5 cut(s) | 53, 125, 135, 162, 516 |
| BstSFI | CTRYAG | 2 cut(s) | 334, 506 |
| BstSLI | GKGCMC | 1 cut(s) | 143 |
| BstUI | CGCG | 1 cut(s) | 113 |
| BstV1I | GCAGC | 1 cut(s) | 790 |
| BstX2I | RGATCY | 2 cut(s) | 228, 769 |
| BstYI | RGATCY | 2 cut(s) | 228, 769 |
| BsuRI | GGCC | 4 cut(s) | 116, 131, 141, 662 |
| BtgI | CCRYGG | 2 cut(s) | 82, 111 |
| BtrI | CACGTC | 1 cut(s) | 546 |
| BtsCI | GGATG | 3 cut(s) | 50, 316, 526 |
| BtsI | GCAGTG | 1 cut(s) | 531 |
| BtsIMutI | CAGTG | 2 cut(s) | 387, 531 |
| CfoI | GCGC | 1 cut(s) | 125 |
| Cfr13I | GGNCC | 4 cut(s) | 57, 129, 139, 140 |
| Cfr42I | CCGCGG | 1 cut(s) | 114 |
| CviAII | CATG | 5 cut(s) | 244, 258, 375, 830, 839 |
| DdeI | CTNAG | 2 cut(s) | 367, 390 |
| DinI | GGCGCC | 1 cut(s) | 124 |
| DpnI | GATC | 8 cut(s) | 77, 230, 248, 291, 573, 638, 771, 818 |
| DpnII | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 370 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 370 |
| EaeI | YGGCCR | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 1 cut(s) | 66 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| Eco57I | CTGAAG | 2 cut(s) | 761, 876 |
| EcoO109I | RGGNCCY | 1 cut(s) | 129 |
| EcoRI | GAATTC | 1 cut(s) | 696 |
| EcoRII | CCWGG | 2 cut(s) | 125, 135 |
| EcoT14I | CCWWGG | 1 cut(s) | 66 |
| EcoT22I | ATGCAT | 1 cut(s) | 568 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| EgeI | GGCGCC | 1 cut(s) | 124 |
| EheI | GGCGCC | 1 cut(s) | 124 |
| ErhI | CCWWGG | 1 cut(s) | 66 |
| FaeI | CATG | 5 cut(s) | 247, 261, 378, 833, 842 |
| FatI | CATG | 5 cut(s) | 243, 257, 374, 829, 838 |
| FauI | CCCGC | 1 cut(s) | 190 |
| FbaI | TGATCA | 1 cut(s) | 816 |
| FblI | GTMKAC | 1 cut(s) | 825 |
| Fnu4HI | GCNGC | 3 cut(s) | 111, 114, 779 |
| FokI | GGATG | 3 cut(s) | 37, 323, 533 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 3 cut(s) | 111, 114, 779 |
| FspBI | CTAG | 2 cut(s) | 692, 761 |
| GlaI | GCGC | 1 cut(s) | 124 |
| GluI | GCNGC | 3 cut(s) | 111, 114, 779 |
| GsuI | CTGGAG | 1 cut(s) | 794 |
| HaeII | RGCGCY | 1 cut(s) | 126 |
| HaeIII | GGCC | 4 cut(s) | 116, 131, 141, 662 |
| HapII | CCGG | 5 cut(s) | 54, 96, 157, 163, 518 |
| HhaI | GCGC | 1 cut(s) | 125 |
| Hin1I | GRCGYC | 1 cut(s) | 123 |
| Hin1II | CATG | 5 cut(s) | 247, 261, 378, 833, 842 |
| Hin6I | GCGC | 1 cut(s) | 123 |
| HinP1I | GCGC | 1 cut(s) | 123 |
| HincII | GTYRAC | 2 cut(s) | 826, 847 |
| HindII | GTYRAC | 2 cut(s) | 826, 847 |
| HindIII | AAGCTT | 2 cut(s) | 416, 876 |
| HinfI | GANTC | 3 cut(s) | 87, 371, 577 |
| HpaII | CCGG | 5 cut(s) | 54, 96, 157, 163, 518 |
| HphI | GGTGA | 1 cut(s) | 826 |
| Hpy166II | GTNNAC | 4 cut(s) | 60, 82, 826, 847 |
| Hpy188I | TCNGA | 6 cut(s) | 228, 236, 370, 571, 576, 702 |
| Hpy188III | TCNNGA | 4 cut(s) | 157, 250, 734, 773 |
| Hpy8I | GTNNAC | 4 cut(s) | 60, 82, 826, 847 |
| Hpy99I | CGWCG | 2 cut(s) | 95, 310 |
| HpyAV | CCTTC | 2 cut(s) | 33, 805 |
| HpyCH4IV | ACGT | 1 cut(s) | 545 |
| HpyCH4V | TGCA | 4 cut(s) | 508, 524, 566, 757 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 101, 110, 122, 191, 275, 384, 521 |
| HpyF3I | CTNAG | 2 cut(s) | 367, 390 |
| HpySE526I | ACGT | 1 cut(s) | 545 |
| Hsp92I | GRCGYC | 1 cut(s) | 123 |
| Hsp92II | CATG | 5 cut(s) | 247, 261, 378, 833, 842 |
| HspAI | GCGC | 1 cut(s) | 123 |
| KasI | GGCGCC | 1 cut(s) | 122 |
| Kpn2I | TCCGGA | 1 cut(s) | 156 |
| Ksp22I | TGATCA | 1 cut(s) | 816 |
| KspI | CCGCGG | 1 cut(s) | 114 |
| Kzo9I | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| LmnI | GCTCC | 4 cut(s) | 159, 347, 690, 775 |
| Lsp1109I | GCAGC | 1 cut(s) | 790 |
| LweI | GCATC | 5 cut(s) | 183, 287, 511, 553, 575 |
| MaeI | CTAG | 2 cut(s) | 692, 761 |
| MaeII | ACGT | 1 cut(s) | 545 |
| MaeIII | GTNAC | 1 cut(s) | 541 |
| MalI | GATC | 8 cut(s) | 77, 230, 248, 291, 573, 638, 771, 818 |
| MboI | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| MflI | RGATCY | 2 cut(s) | 228, 769 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 2 cut(s) | 144, 696 |
| Mly113I | GGCGCC | 1 cut(s) | 123 |
| MlyI | GAGTC | 2 cut(s) | 81, 380 |
| Mph1103I | ATGCAT | 1 cut(s) | 568 |
| MroI | TCCGGA | 1 cut(s) | 156 |
| MroXI | GAANNNNTTC | 1 cut(s) | 408 |
| MseI | TTAA | 5 cut(s) | 498, 551, 645, 783, 881 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 5 cut(s) | 54, 96, 157, 163, 518 |
| MspR9I | CCNGG | 5 cut(s) | 55, 127, 137, 164, 518 |
| Mva1269I | GAATGC | 1 cut(s) | 335 |
| MvaI | CCWGG | 2 cut(s) | 127, 137 |
| MvnI | CGCG | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 101, 110, 122, 191, 275, 384, 521 |
| NarI | GGCGCC | 1 cut(s) | 123 |
| NciI | CCSGG | 3 cut(s) | 55, 164, 518 |
| NdeII | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| NlaIII | CATG | 5 cut(s) | 247, 261, 378, 833, 842 |
| NlaIV | GGNNCC | 4 cut(s) | 58, 124, 141, 161 |
| NmuCI | GTSAC | 1 cut(s) | 541 |
| NsiI | ATGCAT | 1 cut(s) | 568 |
| PctI | GAATGC | 1 cut(s) | 335 |
| PdmI | GAANNNNTTC | 1 cut(s) | 408 |
| PfeI | GAWTC | 1 cut(s) | 577 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 72 |
| PkrI | GCNGC | 3 cut(s) | 112, 115, 780 |
| PleI | GAGTC | 2 cut(s) | 81, 379 |
| PluTI | GGCGCC | 1 cut(s) | 126 |
| PpsI | GAGTC | 2 cut(s) | 81, 379 |
| Psp6I | CCWGG | 2 cut(s) | 125, 135 |
| PspGI | CCWGG | 2 cut(s) | 125, 135 |
| PspN4I | GGNNCC | 4 cut(s) | 58, 124, 141, 161 |
| PspOMI | GGGCCC | 1 cut(s) | 139 |
| PspPI | GGNCC | 4 cut(s) | 57, 129, 139, 140 |
| PstI | CTGCAG | 1 cut(s) | 510 |
| PsuI | RGATCY | 2 cut(s) | 228, 769 |
| SacII | CCGCGG | 1 cut(s) | 114 |
| SalI | GTCGAC | 1 cut(s) | 824 |
| SaqAI | TTAA | 5 cut(s) | 498, 551, 645, 783, 881 |
| SatI | GCNGC | 3 cut(s) | 111, 114, 779 |
| Sau3AI | GATC | 8 cut(s) | 75, 228, 246, 289, 571, 636, 769, 816 |
| Sau96I | GGNCC | 4 cut(s) | 57, 129, 139, 140 |
| SchI | GAGTC | 2 cut(s) | 81, 380 |
| ScrFI | CCNGG | 5 cut(s) | 55, 127, 137, 164, 518 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SfaNI | GCATC | 5 cut(s) | 183, 287, 511, 553, 575 |
| SfcI | CTRYAG | 2 cut(s) | 334, 506 |
| SfoI | GGCGCC | 1 cut(s) | 124 |
| Sfr303I | CCGCGG | 1 cut(s) | 114 |
| SgrBI | CCGCGG | 1 cut(s) | 114 |
| SinI | GGWCC | 1 cut(s) | 57 |
| SmlI | CTYRAG | 1 cut(s) | 419 |
| SmoI | CTYRAG | 1 cut(s) | 419 |
| Sse9I | AATT | 2 cut(s) | 144, 696 |
| SsiI | CCGC | 6 cut(s) | 63, 111, 113, 183, 537, 668 |
| SspDI | GGCGCC | 1 cut(s) | 122 |
| SspI | AATATT | 1 cut(s) | 448 |
| SspMI | CTAG | 2 cut(s) | 692, 761 |
| StyD4I | CCNGG | 5 cut(s) | 53, 125, 135, 162, 516 |
| StyI | CCWWGG | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 548 |
| TaqI | TCGA | 3 cut(s) | 580, 733, 825 |
| TasI | AATT | 2 cut(s) | 144, 696 |
| TauI | GCSGC | 2 cut(s) | 113, 116 |
| TfiI | GAWTC | 1 cut(s) | 577 |
| Tru1I | TTAA | 5 cut(s) | 498, 551, 645, 783, 881 |
| Tru9I | TTAA | 5 cut(s) | 498, 551, 645, 783, 881 |
| TscAI | CASTG | 2 cut(s) | 394, 531 |
| TseFI | GTSAC | 1 cut(s) | 541 |
| TseI | GCWGC | 1 cut(s) | 778 |
| Tsp45I | GTSAC | 1 cut(s) | 541 |
| TspDTI | ATGAA | 3 cut(s) | 17, 417, 824 |
| TspGWI | ACGGA | 3 cut(s) | 4, 99, 323 |
| TspRI | CASTG | 2 cut(s) | 394, 531 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 72 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| XapI | RAATTY | 1 cut(s) | 696 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 133, 836 |
| XmiI | GTMKAC | 1 cut(s) | 825 |
| XmnI | GAANNNNTTC | 1 cut(s) | 408 |
| XspI | CTAG | 2 cut(s) | 692, 761 |
| Zsp2I | ATGCAT | 1 cut(s) | 568 |