3-deoxy-manno-octulosonate cytidylyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53000 AT1G53000 |
| fragaria_vesca | FvH4_3g20180 FvH4_3g20180 FvH4_3g20180 |
| malus_domestica | MD03G1226400.v1.1 MD11G1244700.v1.1 |
| prunus_persica | Prupe.4G047000_v2.0.a1 Prupe.4G047000_v2.0.a1 Prupe.4G183000_v2.0.a1 Prupe.4G183000_v2.0.a1 |
| pyrus_communis | pycom03g17410 pycom11g21680 |
| rosa_chinensis | RchiOBHm_Chr5g0008351 RchiOBHm_Chr5g0033991 |
| rosa_laevigata | RLG00000033517 |
| rosa_multiflora | Rmu_sc0012341.1_g000007 Rmu_sc0014753.1_g000003 Rmu_sc0021840.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00046240 Rroxscaffold_1G00068140 |
| rosa_rugosa | Rorug04G0435400 Rorug04G0435400 Rorug05G0144000 |
| rosa_samantha | Rh5AG063900 Rh5AG234900 Rh5BG060800 Rh5BG235700 Rh5CG070800 Rh5CG265500 Rh5DG059800 |
| rosa_wichuraiana | Rw5G005710 Rw5G021470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 816 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 382 |
| AccB1I | GGYRCC | 1 cut(s) | 134 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 84 |
| AccI | GTMKAC | 2 cut(s) | 144, 858 |
| AccII | CGCG | 1 cut(s) | 214 |
| AccIII | TCCGGA | 1 cut(s) | 168 |
| AciI | CCGC | 5 cut(s) | 122, 125, 195, 214, 549 |
| AclWI | GGATC | 6 cut(s) | 95, 235, 253, 309, 578, 789 |
| AcsI | RAATTY | 1 cut(s) | 708 |
| AcuI | CTGAAG | 1 cut(s) | 773 |
| AcyI | GRCGYC | 1 cut(s) | 135 |
| AfaI | GTAC | 1 cut(s) | 400 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 66, 84, 175 |
| AflIII | ACRYGT | 1 cut(s) | 909 |
| AgsI | TTSAA | 4 cut(s) | 485, 572, 639, 806 |
| AjiI | CACGTC | 1 cut(s) | 558 |
| AjnI | CCWGG | 1 cut(s) | 147 |
| AluBI | AGCT | 9 cut(s) | 75, 158, 430, 515, 717, 751, 793, 890, 904 |
| AluI | AGCT | 9 cut(s) | 75, 158, 430, 515, 717, 751, 793, 890, 904 |
| AlwI | GGATC | 6 cut(s) | 95, 235, 253, 309, 578, 789 |
| Ama87I | CYCGRG | 1 cut(s) | 138 |
| Aor13HI | TCCGGA | 1 cut(s) | 168 |
| AoxI | GGCC | 2 cut(s) | 151, 672 |
| ApaI | GGGCCC | 1 cut(s) | 155 |
| ApeKI | GCWGC | 1 cut(s) | 790 |
| ApoI | RAATTY | 1 cut(s) | 708 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 420 |
| AspLEI | GCGC | 2 cut(s) | 137, 362 |
| AspS9I | GGNCC | 2 cut(s) | 151, 152 |
| AsuC2I | CCSGG | 4 cut(s) | 61, 139, 140, 176 |
| AsuHPI | GGTGA | 1 cut(s) | 838 |
| AvaI | CYCGRG | 1 cut(s) | 138 |
| BaeGI | GKGCMC | 1 cut(s) | 155 |
| BanI | GGYRCC | 1 cut(s) | 134 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 802 |
| BccI | CCATC | 2 cut(s) | 494, 708 |
| BciT130I | CCWGG | 1 cut(s) | 149 |
| BcnI | CCSGG | 4 cut(s) | 61, 139, 140, 176 |
| BfaI | CTAG | 3 cut(s) | 287, 704, 773 |
| BfmI | CTRYAG | 2 cut(s) | 346, 518 |
| BfoI | RGCGCY | 2 cut(s) | 138, 363 |
| BisI | GCNGC | 3 cut(s) | 123, 126, 791 |
| BlsI | GCNGC | 3 cut(s) | 124, 127, 792 |
| Bme1390I | CCNGG | 5 cut(s) | 61, 139, 140, 149, 176 |
| BmeT110I | CYCGRG | 1 cut(s) | 138 |
| BmgBI | CACGTC | 1 cut(s) | 558 |
| BmgT120I | GGNCC | 2 cut(s) | 151, 152 |
| BmiI | GGNNCC | 3 cut(s) | 136, 153, 173 |
| BmrFI | CCNGG | 5 cut(s) | 61, 139, 140, 149, 176 |
| BmsI | GCATC | 3 cut(s) | 195, 523, 565 |
| BpmI | CTGGAG | 1 cut(s) | 806 |
| BpuEI | CTTGAG | 1 cut(s) | 452 |
| BpuMI | CCSGG | 4 cut(s) | 61, 139, 140, 176 |
| BsaBI | GATNNNNATC | 1 cut(s) | 588 |
| BsaHI | GRCGYC | 1 cut(s) | 135 |
| BsaJI | CCNNGG | 5 cut(s) | 78, 94, 138, 148, 244 |
| BsaWI | WCCGGW | 1 cut(s) | 168 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 66, 84, 175 |
| Bse8I | GATNNNNATC | 1 cut(s) | 588 |
| BseAI | TCCGGA | 1 cut(s) | 168 |
| BseBI | CCWGG | 1 cut(s) | 149 |
| BseDI | CCNNGG | 5 cut(s) | 78, 94, 138, 148, 244 |
| BseGI | GGATG | 3 cut(s) | 41, 56, 475 |
| BseJI | GATNNNNATC | 1 cut(s) | 588 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 66, 84, 175 |
| BseMII | CTCAG | 2 cut(s) | 393, 393 |
| BseSI | GKGCMC | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 802 |
| BseYI | CCCAGC | 1 cut(s) | 154 |
| Bsh1236I | CGCG | 1 cut(s) | 214 |
| Bsh1285I | CGRYCG | 1 cut(s) | 132 |
| BshFI | GGCC | 2 cut(s) | 153, 674 |
| BshNI | GGYRCC | 1 cut(s) | 134 |
| BsiEI | CGRYCG | 1 cut(s) | 132 |
| BsiHKCI | CYCGRG | 1 cut(s) | 138 |
| BsiSI | CCGG | 5 cut(s) | 60, 108, 139, 169, 175 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 66, 84, 175 |
| BsmI | GAATGC | 1 cut(s) | 347 |
| BsnI | GGCC | 2 cut(s) | 153, 674 |
| BsoBI | CYCGRG | 1 cut(s) | 138 |
| Bsp120I | GGGCCC | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 1 cut(s) | 155 |
| Bsp13I | TCCGGA | 1 cut(s) | 168 |
| Bsp143I | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| BspACI | CCGC | 5 cut(s) | 122, 125, 195, 214, 549 |
| BspANI | GGCC | 2 cut(s) | 153, 674 |
| BspCNI | CTCAG | 2 cut(s) | 392, 394 |
| BspEI | TCCGGA | 1 cut(s) | 168 |
| BspFNI | CGCG | 1 cut(s) | 214 |
| BspLI | GGNNCC | 3 cut(s) | 136, 153, 173 |
| BspMAI | CTGCAG | 1 cut(s) | 522 |
| BspPI | GGATC | 6 cut(s) | 95, 235, 253, 309, 578, 789 |
| BspQI | GCTCTTC | 1 cut(s) | 28 |
| BspT107I | GGYRCC | 1 cut(s) | 134 |
| BssECI | CCNNGG | 5 cut(s) | 78, 94, 138, 148, 244 |
| BssMI | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| BssNI | GRCGYC | 1 cut(s) | 135 |
| BssT1I | CCWWGG | 1 cut(s) | 78 |
| Bst2UI | CCWGG | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 1 cut(s) | 684 |
| Bst6I | CTCTTC | 2 cut(s) | 28, 771 |
| BstACI | GRCGYC | 1 cut(s) | 135 |
| BstDEI | CTNAG | 3 cut(s) | 159, 379, 402 |
| BstDSI | CCRYGG | 1 cut(s) | 94 |
| BstF5I | GGATG | 3 cut(s) | 41, 56, 475 |
| BstFNI | CGCG | 1 cut(s) | 214 |
| BstH2I | RGCGCY | 2 cut(s) | 138, 363 |
| BstHHI | GCGC | 2 cut(s) | 137, 362 |
| BstKTI | GATC | 7 cut(s) | 90, 132, 243, 261, 304, 586, 784 |
| BstMBI | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| BstMCI | CGRYCG | 1 cut(s) | 132 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 113, 122, 134, 203, 287, 533 |
| BstNI | CCWGG | 1 cut(s) | 149 |
| BstNSI | RCATGY | 1 cut(s) | 913 |
| BstSCI | CCNGG | 5 cut(s) | 59, 137, 138, 147, 174 |
| BstSFI | CTRYAG | 2 cut(s) | 346, 518 |
| BstSLI | GKGCMC | 1 cut(s) | 155 |
| BstUI | CGCG | 1 cut(s) | 214 |
| BstV1I | GCAGC | 1 cut(s) | 802 |
| BstX2I | RGATCY | 2 cut(s) | 240, 781 |
| BstYI | RGATCY | 2 cut(s) | 240, 781 |
| BsuRI | GGCC | 2 cut(s) | 153, 674 |
| BtgI | CCRYGG | 1 cut(s) | 94 |
| BtrI | CACGTC | 1 cut(s) | 558 |
| BtsCI | GGATG | 3 cut(s) | 41, 56, 475 |
| BtsI | GCAGTG | 1 cut(s) | 543 |
| BtsIMutI | CAGTG | 1 cut(s) | 543 |
| CfoI | GCGC | 2 cut(s) | 137, 362 |
| Cfr13I | GGNCC | 2 cut(s) | 151, 152 |
| Cfr9I | CCCGGG | 1 cut(s) | 138 |
| Csp6I | GTAC | 1 cut(s) | 399 |
| CviAII | CATG | 5 cut(s) | 256, 270, 842, 851, 910 |
| CviQI | GTAC | 1 cut(s) | 399 |
| DdeI | CTNAG | 3 cut(s) | 159, 379, 402 |
| DinI | GGCGCC | 1 cut(s) | 136 |
| DpnI | GATC | 7 cut(s) | 89, 131, 242, 260, 303, 585, 783 |
| DpnII | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| DraI | TTTAAA | 1 cut(s) | 564 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 382 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 382 |
| Eam1104I | CTCTTC | 2 cut(s) | 28, 771 |
| EarI | CTCTTC | 2 cut(s) | 28, 771 |
| Eco130I | CCWWGG | 1 cut(s) | 78 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco57I | CTGAAG | 1 cut(s) | 773 |
| Eco88I | CYCGRG | 1 cut(s) | 138 |
| EcoRI | GAATTC | 1 cut(s) | 708 |
| EcoRII | CCWGG | 1 cut(s) | 147 |
| EcoT14I | CCWWGG | 1 cut(s) | 78 |
| EcoT22I | ATGCAT | 1 cut(s) | 580 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| EgeI | GGCGCC | 1 cut(s) | 136 |
| EheI | GGCGCC | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 78 |
| FaeI | CATG | 5 cut(s) | 259, 273, 845, 854, 913 |
| FatI | CATG | 5 cut(s) | 255, 269, 841, 850, 909 |
| FauI | CCCGC | 1 cut(s) | 202 |
| FblI | GTMKAC | 2 cut(s) | 144, 858 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 126, 791 |
| FokI | GGATG | 3 cut(s) | 28, 43, 482 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 126, 791 |
| FspBI | CTAG | 3 cut(s) | 287, 704, 773 |
| GlaI | GCGC | 2 cut(s) | 136, 361 |
| GluI | GCNGC | 3 cut(s) | 123, 126, 791 |
| GsaI | CCCAGC | 1 cut(s) | 158 |
| GsuI | CTGGAG | 1 cut(s) | 806 |
| HaeII | RGCGCY | 2 cut(s) | 138, 363 |
| HaeIII | GGCC | 2 cut(s) | 153, 674 |
| HapII | CCGG | 5 cut(s) | 60, 108, 139, 169, 175 |
| HhaI | GCGC | 2 cut(s) | 137, 362 |
| Hin1I | GRCGYC | 1 cut(s) | 135 |
| Hin1II | CATG | 5 cut(s) | 259, 273, 845, 854, 913 |
| Hin6I | GCGC | 2 cut(s) | 135, 360 |
| HinP1I | GCGC | 2 cut(s) | 135, 360 |
| HincII | GTYRAC | 2 cut(s) | 838, 859 |
| HindII | GTYRAC | 2 cut(s) | 838, 859 |
| HindIII | AAGCTT | 2 cut(s) | 428, 888 |
| HinfI | GANTC | 4 cut(s) | 99, 111, 383, 649 |
| HpaII | CCGG | 5 cut(s) | 60, 108, 139, 169, 175 |
| HphI | GGTGA | 1 cut(s) | 838 |
| Hpy166II | GTNNAC | 4 cut(s) | 94, 145, 838, 859 |
| Hpy188I | TCNGA | 5 cut(s) | 240, 248, 382, 426, 714 |
| Hpy188III | TCNNGA | 6 cut(s) | 169, 262, 746, 785, 803, 866 |
| Hpy8I | GTNNAC | 4 cut(s) | 94, 145, 838, 859 |
| Hpy99I | CGWCG | 3 cut(s) | 107, 185, 214 |
| HpyAV | CCTTC | 1 cut(s) | 817 |
| HpyCH4III | ACNGT | 1 cut(s) | 684 |
| HpyCH4IV | ACGT | 1 cut(s) | 557 |
| HpyCH4V | TGCA | 4 cut(s) | 520, 536, 578, 769 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 113, 122, 134, 203, 287, 533 |
| HpyF3I | CTNAG | 3 cut(s) | 159, 379, 402 |
| HpySE526I | ACGT | 1 cut(s) | 557 |
| Hsp92I | GRCGYC | 1 cut(s) | 135 |
| Hsp92II | CATG | 5 cut(s) | 259, 273, 845, 854, 913 |
| HspAI | GCGC | 2 cut(s) | 135, 360 |
| KasI | GGCGCC | 1 cut(s) | 134 |
| Kpn2I | TCCGGA | 1 cut(s) | 168 |
| Kzo9I | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| LguI | GCTCTTC | 1 cut(s) | 28 |
| LmnI | GCTCC | 4 cut(s) | 80, 171, 702, 787 |
| Lsp1109I | GCAGC | 1 cut(s) | 802 |
| LweI | GCATC | 3 cut(s) | 195, 523, 565 |
| MaeI | CTAG | 3 cut(s) | 287, 704, 773 |
| MaeII | ACGT | 1 cut(s) | 557 |
| MaeIII | GTNAC | 1 cut(s) | 553 |
| MalI | GATC | 7 cut(s) | 89, 131, 242, 260, 303, 585, 783 |
| MboI | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| MfeI | CAATTG | 1 cut(s) | 117 |
| MflI | RGATCY | 2 cut(s) | 240, 781 |
| MhlI | GDGCHC | 1 cut(s) | 155 |
| MluCI | AATT | 2 cut(s) | 117, 708 |
| Mly113I | GGCGCC | 1 cut(s) | 135 |
| MlyI | GAGTC | 2 cut(s) | 120, 392 |
| MnlI | CCTC | 9 cut(s) | 55, 214, 240, 254, 270, 388, 486, 772, 838 |
| Mph1103I | ATGCAT | 1 cut(s) | 580 |
| MroI | TCCGGA | 1 cut(s) | 168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 420 |
| MseI | TTAA | 6 cut(s) | 510, 563, 657, 795, 831, 893 |
| MspI | CCGG | 5 cut(s) | 60, 108, 139, 169, 175 |
| MspR9I | CCNGG | 5 cut(s) | 61, 139, 140, 149, 176 |
| MunI | CAATTG | 1 cut(s) | 117 |
| Mva1269I | GAATGC | 1 cut(s) | 347 |
| MvaI | CCWGG | 1 cut(s) | 149 |
| MvnI | CGCG | 1 cut(s) | 214 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 113, 122, 134, 203, 287, 533 |
| NarI | GGCGCC | 1 cut(s) | 135 |
| NciI | CCSGG | 4 cut(s) | 61, 139, 140, 176 |
| NdeII | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| NlaIII | CATG | 5 cut(s) | 259, 273, 845, 854, 913 |
| NlaIV | GGNNCC | 3 cut(s) | 136, 153, 173 |
| NmuCI | GTSAC | 1 cut(s) | 553 |
| NsiI | ATGCAT | 1 cut(s) | 580 |
| NspI | RCATGY | 1 cut(s) | 913 |
| PciI | ACATGT | 1 cut(s) | 909 |
| PciSI | GCTCTTC | 1 cut(s) | 28 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 864 |
| PctI | GAATGC | 1 cut(s) | 347 |
| PdmI | GAANNNNTTC | 1 cut(s) | 420 |
| PfeI | GAWTC | 2 cut(s) | 99, 649 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 84 |
| PkrI | GCNGC | 3 cut(s) | 124, 127, 792 |
| Ple19I | CGATCG | 1 cut(s) | 132 |
| PleI | GAGTC | 2 cut(s) | 119, 391 |
| PluTI | GGCGCC | 1 cut(s) | 138 |
| PpsI | GAGTC | 2 cut(s) | 119, 391 |
| PscI | ACATGT | 1 cut(s) | 909 |
| PsiI | TTATAA | 1 cut(s) | 816 |
| Psp6I | CCWGG | 1 cut(s) | 147 |
| PspFI | CCCAGC | 1 cut(s) | 154 |
| PspGI | CCWGG | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 3 cut(s) | 136, 153, 173 |
| PspOMI | GGGCCC | 1 cut(s) | 151 |
| PspPI | GGNCC | 2 cut(s) | 151, 152 |
| PstI | CTGCAG | 1 cut(s) | 522 |
| PsuI | RGATCY | 2 cut(s) | 240, 781 |
| PvuI | CGATCG | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 400 |
| RsaNI | GTAC | 1 cut(s) | 399 |
| SalI | GTCGAC | 1 cut(s) | 857 |
| SapI | GCTCTTC | 1 cut(s) | 28 |
| SaqAI | TTAA | 6 cut(s) | 510, 563, 657, 795, 831, 893 |
| SatI | GCNGC | 3 cut(s) | 123, 126, 791 |
| Sau3AI | GATC | 7 cut(s) | 87, 129, 240, 258, 301, 583, 781 |
| Sau96I | GGNCC | 2 cut(s) | 151, 152 |
| SchI | GAGTC | 2 cut(s) | 120, 392 |
| ScrFI | CCNGG | 5 cut(s) | 61, 139, 140, 149, 176 |
| SduI | GDGCHC | 1 cut(s) | 155 |
| SfaNI | GCATC | 3 cut(s) | 195, 523, 565 |
| SfcI | CTRYAG | 2 cut(s) | 346, 518 |
| SfoI | GGCGCC | 1 cut(s) | 136 |
| SmaI | CCCGGG | 1 cut(s) | 140 |
| SmlI | CTYRAG | 1 cut(s) | 431 |
| SmoI | CTYRAG | 1 cut(s) | 431 |
| Sse9I | AATT | 2 cut(s) | 117, 708 |
| SsiI | CCGC | 5 cut(s) | 122, 125, 195, 214, 549 |
| SspDI | GGCGCC | 1 cut(s) | 134 |
| SspI | AATATT | 1 cut(s) | 460 |
| SspMI | CTAG | 3 cut(s) | 287, 704, 773 |
| StyD4I | CCNGG | 5 cut(s) | 59, 137, 138, 147, 174 |
| StyI | CCWWGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 684 |
| TaiI | ACGT | 1 cut(s) | 560 |
| TaqI | TCGA | 3 cut(s) | 592, 745, 858 |
| TasI | AATT | 2 cut(s) | 117, 708 |
| TauI | GCSGC | 2 cut(s) | 125, 128 |
| TfiI | GAWTC | 2 cut(s) | 99, 649 |
| Tru1I | TTAA | 6 cut(s) | 510, 563, 657, 795, 831, 893 |
| Tru9I | TTAA | 6 cut(s) | 510, 563, 657, 795, 831, 893 |
| TscAI | CASTG | 1 cut(s) | 543 |
| TseFI | GTSAC | 1 cut(s) | 553 |
| TseI | GCWGC | 1 cut(s) | 790 |
| Tsp45I | GTSAC | 1 cut(s) | 553 |
| TspDTI | ATGAA | 4 cut(s) | 17, 30, 429, 836 |
| TspGWI | ACGGA | 1 cut(s) | 111 |
| TspMI | CCCGGG | 1 cut(s) | 138 |
| TspRI | CASTG | 1 cut(s) | 543 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 84 |
| XapI | RAATTY | 1 cut(s) | 708 |
| XceI | RCATGY | 1 cut(s) | 913 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 848 |
| XmaI | CCCGGG | 1 cut(s) | 138 |
| XmiI | GTMKAC | 2 cut(s) | 144, 858 |
| XmnI | GAANNNNTTC | 1 cut(s) | 420 |
| XspI | CTAG | 3 cut(s) | 287, 704, 773 |
| Zsp2I | ATGCAT | 1 cut(s) | 580 |