Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Forward (+)

14078069 .. 14083634

Gene Structure 5566 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g21060.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGTCTGTGGAGCAAGAGATTTCTCACTCGTCCCGCATGCACCACTACGTCACACACGACGACGACGACGACAGCTCTGAGGAATCAGAAGAGAGAGTTTTCGAAGATTATGAAGACGACGATGAGGAAGAGGATGACAGTGGCAAAGGGAGTAAATTCTGCATGTTCACCGCGTGCGGCGGTGACGACTCTCGCCGCAGGAGACCGAGTTGGTCCCTGGGCCAGGTCCTGGACCCGCGAGCCAAGTGGGTCCAGGAATGGAACCGGGTTTTCCTCCTGGTTTGCGCCACCGGGCTGGTGATCGACCCTTTGTTCTTCTACGCTCTGTCGATCAGCGGGAGATGTATGTGTCTGTTTGTGGACGGGTGGTTTGCGATAACGGTGACGGTGCTCCGGTGCATGACGGACGTTCTGCACGTGTGGAACATGTGGCTGCAGCTGAAGATGGCGAAGAGGTACTCCTTCACGGCCATGGTTGGTGGTGGTGAAGGGACAAACAATGGGCTGCGTGATACCAGTCCTCGCTCTGTGGCGATGAGATATTTGAAGGGCAAGAAGGGGTTTTTGTTTGATCTCTTTGTTATTCTGCCTATCCCCCAGATAGTATTATGGGTAGTGATTCCTGCACTACTGGAGAGGGGATCAGTGACGGTGGTGATGACAGTGTTCTTGATGTTCTTCATTCAATATCTCCCGAAAATCTATCACTCTGTTTGCCTCTTGCGGCGAATGCAAAACCTCTCAGGCTACATCTTTGGCACTGTCTGGTGGGGAATAGCCCTCAATTTGATTGCGTATTTTGTTGCCGCTCATGCTGCAGGAGCATGTTGGTACTTGTTAGGAATCCAAAGAGCCGAGAAATGCCTGAAAGAGCAATGCAGGGAAACAGCTGGTTGTGGACTGAGAATATTATCTTGCAAAGACCCATTTTACTATGGAAAAGAAACCAACTTGAGAGACAGAGCAAGAATAGCATGGGCAAACAACAAGCAAGCAAGGTCTACATGCTTGGATAGTCCTGACCATTACGACTATGGAGCCTTTGCATGGACTGTTCAGCTTTTCACAAACACCAGCCGCTTGGAAAAGATACTATTCCCTATCTTTTGGGGCCTAATGACTCTCAGCACCTTTGGGAACTTGGAAAGCTCAACGGAATGGTTAGAGGTTGTTTTCAACATAATTGTTTTAACCAGTGGACTCCTTTTGGTCACTATGTTGATAGGAAACATAAAGGTGTTTTTGCATGCAACCACTTCAAAGAAACAAGCAATGCAATTGAAGATGAGAAACATAGAGTGGTGGATGAGGAAGAGGCACTTGCCTATGGGGTTCAGGCAACGGGTGCGCAACTACGAGCGTCAGCGATGGGCAGCCATGCGCGGAGTGGATGAATGTGAGATGATCAGGAACCTGCCCGAGGGCCTCAGAAGGGACATCAAGTATCACCTGTGCTTGGACTTGGTCAGACAGGTACCGTTGTTCCAATATATGGACGATCTGGTTCTTGAGAACATTTGTGATCGCGTCAAGTCTCTTATCTTCCCAAAAGGAGAAACAATCACAAGAGAGGGAGACCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGACATCTTCAAAGCAGCCAGGTTCTCAGAGACGGTGTGAAAAGTTGCTGCATGTTAGGCCCTGGAAACTTCAGTGGTGACGAGCTCTTGTCATGGTGTCTCCGAAGGCCCTTCATAGAAAGACTACCACCATCTTCCTCGACGCTAATCACTCTCGAAACCACAGAAGCATTCAGCCTTGAAGCAGAGGATGTCAAATATGTGACACAACATTTTCGGTACACATTTGTGAACGAAAAGGTCAAGAGAAGTGCGCGGTACTACTCACCAGGTTGGAGGACATGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGGAGGTACAAGCATCGCTTAACTTTAACTTCATTGTCATTCATAAGGCCTCGAAGACCTCTGTCGAGATGTTCTTCGCTGGGAGAGGACAGGCTGAGACTATACACAGCTTTGTTGACTTCTCCAAAGCCAAATGATCAAGATGATTTTTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

693

Amino Acids

80.26

Weight (kDa)

8.75

Isoelectric Point (pI)

54.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	515 - 602	6.1e-08	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1349
Acc36I	ACCTGC	1 cut(s)	1422
Acc65I	GGTACC	1 cut(s)	1474
AccB1I	GGYRCC	1 cut(s)	1474
AccB7I	CCANNNNNTGG	2 cut(s)	229, 1492
AccBSI	CCGCTC	1 cut(s)	809
AccI	GTMKAC	1 cut(s)	1001
AccII	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
AclWI	GGATC	1 cut(s)	649
AcoI	YGGCCR	1 cut(s)	468
AcsI	RAATTY	1 cut(s)	155
AcuI	CTGAAG	2 cut(s)	461, 1663
AcvI	CACGTG	1 cut(s)	418
AdeI	CACNNNGTG	1 cut(s)	174
AfaI	GTAC	6 cut(s)	458, 833, 1476, 1829, 1868, 1928
AfiI	CCNNNNNNNGG	7 cut(s)	223, 229, 1047, 1420, 1432, 1456, 1492
AflIII	ACRYGT	2 cut(s)	417, 426
AgsI	TTSAA	8 cut(s)	547, 686, 1177, 1260, 1282, 1586, 1619, 1790
AjnI	CCWGG	8 cut(s)	216, 222, 228, 252, 276, 1626, 1669, 1876
AleI	CACNNNNGTG	1 cut(s)	1835
AloI	GAACNNNNNNTCC	2 cut(s)	1566, 1598
AluBI	AGCT	7 cut(s)	75, 439, 890, 1060, 1149, 1693, 2030
AluI	AGCT	7 cut(s)	75, 439, 890, 1060, 1149, 1693, 2030
Alw21I	GWGCWC	2 cut(s)	393, 1695
Alw26I	GTCTC	7 cut(s)	196, 951, 1539, 1569, 1632, 1712, 2011
AlwI	GGATC	1 cut(s)	649
AlwNI	CAGNNNCTG	1 cut(s)	229
Ama87I	CYCGRG	1 cut(s)	1418
AoxI	GGCC	7 cut(s)	220, 468, 1111, 1423, 1666, 1715, 1967
ApeKI	GCWGC	8 cut(s)	433, 436, 505, 815, 1373, 1623, 1656, 1895
ApoI	RAATTY	1 cut(s)	155
ArsI	GACNNNNNNTTYG	2 cut(s)	353, 385
Asp718I	GGTACC	1 cut(s)	1474
AspLEI	GCGC	4 cut(s)	287, 1350, 1383, 1864
AspS9I	GGNCC	9 cut(s)	213, 220, 226, 232, 250, 1111, 1423, 1667, 1716
AsuC2I	CCSGG	2 cut(s)	266, 292
AsuHPI	GGTGA	9 cut(s)	160, 194, 310, 394, 497, 667, 1439, 1697, 1866
AsuII	TTCGAA	1 cut(s)	102
AvaI	CYCGRG	1 cut(s)	1418
AvaII	GGWCC	4 cut(s)	213, 226, 232, 250
BaeI	ACNNNNGTAYC	2 cut(s)	1466, 1499
BanI	GGYRCC	1 cut(s)	1474
BanII	GRGCYC	1 cut(s)	1695
BbrPI	CACGTG	1 cut(s)	418
BbsI	GAAGAC	2 cut(s)	120, 1981
Bbv12I	GWGCWC	2 cut(s)	393, 1695
BbvI	GCAGC	8 cut(s)	420, 448, 492, 802, 1385, 1635, 1643, 1882
BccI	CCATC	3 cut(s)	439, 1362, 1747
BceAI	ACGGC	1 cut(s)	483
BciT130I	CCWGG	8 cut(s)	218, 224, 230, 254, 278, 1628, 1671, 1878
BclI	TGATCA	2 cut(s)	1404, 2056
BcnI	CCSGG	2 cut(s)	266, 292
BcoDI	GTCTC	7 cut(s)	196, 951, 1539, 1569, 1632, 1712, 2011
BfmI	CTRYAG	2 cut(s)	434, 816
BfuAI	ACCTGC	1 cut(s)	1422
Bme18I	GGWCC	4 cut(s)	213, 226, 232, 250
BmeT110I	CYCGRG	1 cut(s)	1418
BmgT120I	GGNCC	9 cut(s)	213, 220, 226, 232, 250, 1111, 1423, 1667, 1716
BmiI	GGNNCC	8 cut(s)	215, 234, 251, 263, 1039, 1112, 1412, 1476
BmrI	ACTGGG	1 cut(s)	1574
BmsI	GCATC	1 cut(s)	1942
BmuI	ACTGGG	1 cut(s)	1574
BoxI	GACNNNNGTC	1 cut(s)	1981
BpiI	GAAGAC	2 cut(s)	120, 1981
BpmI	CTGGAG	1 cut(s)	653
Bpu14I	TTCGAA	1 cut(s)	102
BpuEI	CTTGAG	2 cut(s)	973, 1529
BpuMI	CCSGG	2 cut(s)	266, 292
BsaAI	YACGTR	1 cut(s)	418
BsaI	GGTCTC	2 cut(s)	196, 1569
BsaJI	CCNNGG	5 cut(s)	216, 217, 471, 1419, 1669
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	4 cut(s)	193, 223, 1566, 1596
Bsc4I	CCNNNNNNNGG	7 cut(s)	223, 229, 1047, 1420, 1432, 1456, 1492
Bse1I	ACTGG	4 cut(s)	516, 636, 1194, 1580
Bse3DI	GCAATG	2 cut(s)	881, 1278
BseBI	CCWGG	8 cut(s)	218, 224, 230, 254, 278, 1628, 1671, 1878
BseDI	CCNNGG	5 cut(s)	216, 217, 471, 1419, 1669
BseGI	GGATG	4 cut(s)	139, 1311, 1396, 1804
BseLI	CCNNNNNNNGG	7 cut(s)	223, 229, 1047, 1420, 1432, 1456, 1492
BseMI	GCAATG	2 cut(s)	881, 1278
BseMII	CTCAG	7 cut(s)	69, 756, 893, 1138, 1441, 1648, 2006
BseNI	ACTGG	4 cut(s)	516, 636, 1194, 1580
BseRI	GAGGAG	1 cut(s)	1936
BseXI	GCAGC	8 cut(s)	420, 448, 492, 802, 1385, 1635, 1643, 1882
BseYI	CCCAGC	1 cut(s)	1999
BsgI	GTGCAG	2 cut(s)	398, 609
Bsh1236I	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
BshFI	GGCC	7 cut(s)	222, 470, 1113, 1425, 1668, 1717, 1969
BshNI	GGYRCC	1 cut(s)	1474
BsiHKAI	GWGCWC	2 cut(s)	393, 1695
BsiHKCI	CYCGRG	1 cut(s)	1418
BsiSI	CCGG	3 cut(s)	265, 291, 394
BslFI	GGGAC	5 cut(s)	16, 199, 505, 1448, 1623
BslI	CCNNNNNNNGG	7 cut(s)	223, 229, 1047, 1420, 1432, 1456, 1492
BsmAI	GTCTC	7 cut(s)	196, 951, 1539, 1569, 1632, 1712, 2011
BsmBI	CGTCTC	1 cut(s)	1632
BsmFI	GGGAC	5 cut(s)	16, 199, 505, 1448, 1623
BsmI	GAATGC	3 cut(s)	735, 1596, 1778
BsnI	GGCC	7 cut(s)	222, 470, 1113, 1425, 1668, 1717, 1969
Bso31I	GGTCTC	2 cut(s)	196, 1569
BsoBI	CYCGRG	1 cut(s)	1418
Bsp119I	TTCGAA	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	393, 1695
Bsp143I	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
Bsp19I	CCATGG	1 cut(s)	471
BspANI	GGCC	7 cut(s)	222, 470, 1113, 1425, 1668, 1717, 1969
BspCNI	CTCAG	7 cut(s)	70, 755, 894, 1137, 1440, 1647, 2007
BspFNI	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
BspLI	GGNNCC	8 cut(s)	215, 234, 251, 263, 1039, 1112, 1412, 1476
BspMAI	CTGCAG	2 cut(s)	438, 820
BspMI	ACCTGC	1 cut(s)	1422
BspPI	GGATC	1 cut(s)	649
BspT104I	TTCGAA	1 cut(s)	102
BspT107I	GGYRCC	1 cut(s)	1474
BspTNI	GGTCTC	2 cut(s)	196, 1569
BsrBI	CCGCTC	1 cut(s)	809
BsrDI	GCAATG	2 cut(s)	881, 1278
BsrI	ACTGG	4 cut(s)	516, 636, 1194, 1580
BssECI	CCNNGG	5 cut(s)	216, 217, 471, 1419, 1669
BssMI	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
BssT1I	CCWWGG	1 cut(s)	471
Bst2UI	CCWGG	8 cut(s)	218, 224, 230, 254, 278, 1628, 1671, 1878
Bst4CI	ACNGT	9 cut(s)	140, 382, 388, 652, 664, 763, 1054, 1479, 1643
Bst6I	CTCTTC	4 cut(s)	84, 123, 446, 1307
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstBAI	YACGTR	1 cut(s)	418
BstBI	TTCGAA	1 cut(s)	102
BstC8I	GCNNGC	5 cut(s)	38, 175, 240, 993, 1248
BstDEI	CTNAG	7 cut(s)	78, 742, 902, 1124, 1427, 1634, 2015
BstDSI	CCRYGG	1 cut(s)	471
BstENI	CCTNNNNNAGG	2 cut(s)	221, 1418
BstF5I	GGATG	4 cut(s)	139, 1311, 1396, 1804
BstFNI	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
BstHHI	GCGC	4 cut(s)	287, 1350, 1383, 1864
BstKTI	GATC	8 cut(s)	303, 333, 574, 644, 1407, 1501, 1525, 2059
BstMAI	GTCTC	7 cut(s)	196, 951, 1539, 1569, 1632, 1712, 2011
BstMBI	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
BstMWI	GCNNNNNNNGC	8 cut(s)	730, 812, 815, 821, 971, 1345, 1665, 1901
BstNI	CCWGG	8 cut(s)	218, 224, 230, 254, 278, 1628, 1671, 1878
BstNSI	RCATGY	7 cut(s)	40, 166, 430, 828, 1008, 1250, 1663
BstPAI	GACNNNNGTC	1 cut(s)	1981
BstSFI	CTRYAG	2 cut(s)	434, 816
BstUI	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
BstV1I	GCAGC	8 cut(s)	420, 448, 492, 802, 1385, 1635, 1643, 1882
BstV2I	GAAGAC	2 cut(s)	120, 1981
BstXI	CCANNNNNNTGG	2 cut(s)	295, 1081
BsuRI	GGCC	7 cut(s)	222, 470, 1113, 1425, 1668, 1717, 1969
BtgI	CCRYGG	1 cut(s)	471
BtgZI	GCGATG	3 cut(s)	548, 1381, 1919
BtsCI	GGATG	4 cut(s)	139, 1311, 1396, 1804
BtsIMutI	CAGTG	6 cut(s)	145, 651, 669, 759, 1201, 1687
BveI	ACCTGC	1 cut(s)	1422
Cac8I	GCNNGC	5 cut(s)	38, 175, 240, 993, 1248
CaiI	CAGNNNCTG	1 cut(s)	229
CfoI	GCGC	4 cut(s)	287, 1350, 1383, 1864
Cfr13I	GGNCC	9 cut(s)	213, 220, 226, 232, 250, 1111, 1423, 1667, 1716
CseI	GACGC	3 cut(s)	1349, 1516, 1759
CsiI	ACCWGGT	1 cut(s)	1876
Csp6I	GTAC	6 cut(s)	457, 832, 1475, 1828, 1867, 1927
CviQI	GTAC	6 cut(s)	457, 832, 1475, 1828, 1867, 1927
DdeI	CTNAG	7 cut(s)	78, 742, 902, 1124, 1427, 1634, 2015
DpnI	GATC	8 cut(s)	302, 332, 573, 643, 1406, 1500, 1524, 2058
DpnII	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
DraIII	CACNNNGTG	1 cut(s)	174
EaeI	YGGCCR	1 cut(s)	468
Eam1104I	CTCTTC	4 cut(s)	84, 123, 446, 1307
EarI	CTCTTC	4 cut(s)	84, 123, 446, 1307
Ecl136II	GAGCTC	1 cut(s)	1693
Eco130I	CCWWGG	1 cut(s)	471
Eco147I	AGGCCT	1 cut(s)	1969
Eco24I	GRGCYC	1 cut(s)	1695
Eco31I	GGTCTC	2 cut(s)	196, 1569
Eco47I	GGWCC	4 cut(s)	213, 226, 232, 250
Eco53kI	GAGCTC	1 cut(s)	1693
Eco57I	CTGAAG	2 cut(s)	461, 1663
Eco72I	CACGTG	1 cut(s)	418
Eco88I	CYCGRG	1 cut(s)	1418
EcoICRI	GAGCTC	1 cut(s)	1693
EcoNI	CCTNNNNNAGG	2 cut(s)	221, 1418
EcoO109I	RGGNCCY	5 cut(s)	226, 1111, 1423, 1667, 1716
EcoRII	CCWGG	8 cut(s)	216, 222, 228, 252, 276, 1626, 1669, 1876
EcoT14I	CCWWGG	1 cut(s)	471
EcoT38I	GRGCYC	1 cut(s)	1695
ErhI	CCWWGG	1 cut(s)	471
Esp3I	CGTCTC	1 cut(s)	1632
FalI	AAGNNNNNCTT	4 cut(s)	1304, 1336, 1922, 1954
FaqI	GGGAC	5 cut(s)	16, 199, 505, 1448, 1623
FauI	CCCGC	3 cut(s)	41, 243, 329
FbaI	TGATCA	2 cut(s)	1404, 2056
FblI	GTMKAC	1 cut(s)	1001
FokI	GGATG	4 cut(s)	146, 1318, 1403, 1811
FriOI	GRGCYC	1 cut(s)	1695
FspI	TGCGCA	1 cut(s)	1349
GlaI	GCGC	4 cut(s)	286, 1349, 1382, 1863
GsaI	CCCAGC	1 cut(s)	2003
GsuI	CTGGAG	1 cut(s)	653
HaeIII	GGCC	7 cut(s)	222, 470, 1113, 1425, 1668, 1717, 1969
HapII	CCGG	3 cut(s)	265, 291, 394
HgaI	GACGC	3 cut(s)	1349, 1516, 1759
HhaI	GCGC	4 cut(s)	287, 1350, 1383, 1864
Hin6I	GCGC	4 cut(s)	285, 1348, 1381, 1862
HinP1I	GCGC	4 cut(s)	285, 1348, 1381, 1862
HincII	GTYRAC	1 cut(s)	2037
HindII	GTYRAC	1 cut(s)	2037
HinfI	GANTC	6 cut(s)	83, 188, 619, 843, 1120, 1200
HpaII	CCGG	3 cut(s)	265, 291, 394
HphI	GGTGA	9 cut(s)	160, 194, 310, 394, 497, 667, 1439, 1697, 1866
Hpy166II	GTNNAC	8 cut(s)	168, 361, 899, 1002, 1199, 1830, 1840, 2037
Hpy188I	TCNGA	6 cut(s)	79, 88, 1430, 1469, 1637, 1712
Hpy188III	TCNNGA	9 cut(s)	670, 694, 1019, 1408, 1508, 1763, 1852, 1986, 2060
Hpy8I	GTNNAC	8 cut(s)	168, 361, 899, 1002, 1199, 1830, 1840, 2037
Hpy99I	CGWCG	6 cut(s)	62, 65, 68, 71, 122, 1753
HpyAV	CCTTC	7 cut(s)	472, 482, 541, 550, 1425, 1707, 1729
HpyCH4III	ACNGT	9 cut(s)	140, 382, 388, 652, 664, 763, 1054, 1479, 1643
HpyCH4IV	ACGT	3 cut(s)	48, 408, 417
HpyF10VI	GCNNNNNNNGC	8 cut(s)	730, 812, 815, 821, 971, 1345, 1665, 1901
HpyF3I	CTNAG	7 cut(s)	78, 742, 902, 1124, 1427, 1634, 2015
HpySE526I	ACGT	3 cut(s)	48, 408, 417
HspAI	GCGC	4 cut(s)	285, 1348, 1381, 1862
KpnI	GGTACC	1 cut(s)	1478
Ksp22I	TGATCA	2 cut(s)	1404, 2056
Kzo9I	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
LmnI	GCTCC	4 cut(s)	10, 396, 821, 1037
Lsp1109I	GCAGC	8 cut(s)	420, 448, 492, 802, 1385, 1635, 1643, 1882
LweI	GCATC	1 cut(s)	1942
MabI	ACCWGGT	1 cut(s)	1876
MaeII	ACGT	3 cut(s)	48, 408, 417
MaeIII	GTNAC	7 cut(s)	49, 182, 382, 646, 1210, 1685, 1810
MalI	GATC	8 cut(s)	302, 332, 573, 643, 1406, 1500, 1524, 2058
MbiI	CCGCTC	1 cut(s)	809
MboI	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
MfeI	CAATTG	1 cut(s)	1277
MhlI	GDGCHC	2 cut(s)	393, 1695
MluCI	AATT	5 cut(s)	155, 784, 1182, 1277, 1905
MlyI	GAGTC	3 cut(s)	182, 1114, 1194
MmeI	TCCRAC	1 cut(s)	1862
MseI	TTAA	3 cut(s)	1190, 1940, 1946
MslI	CAYNNNNRTG	3 cut(s)	470, 1235, 1835
MspA1I	CMGCKG	3 cut(s)	336, 439, 890
MspI	CCGG	3 cut(s)	265, 291, 394
MunI	CAATTG	1 cut(s)	1277
Mva1269I	GAATGC	3 cut(s)	735, 1596, 1778
MvaI	CCWGG	8 cut(s)	218, 224, 230, 254, 278, 1628, 1671, 1878
MvnI	CGCG	5 cut(s)	173, 238, 1383, 1527, 1864
MwoI	GCNNNNNNNGC	8 cut(s)	730, 812, 815, 821, 971, 1345, 1665, 1901
NciI	CCSGG	2 cut(s)	266, 292
NcoI	CCATGG	1 cut(s)	471
NdeII	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
NlaIV	GGNNCC	8 cut(s)	215, 234, 251, 263, 1039, 1112, 1412, 1476
NmeAIII	GCCGAG	1 cut(s)	880
NmuCI	GTSAC	7 cut(s)	49, 182, 382, 646, 1210, 1685, 1810
NsbI	TGCGCA	1 cut(s)	1349
NspI	RCATGY	7 cut(s)	40, 166, 430, 828, 1008, 1250, 1663
NspV	TTCGAA	1 cut(s)	102
OliI	CACNNNNGTG	1 cut(s)	1835
PaeI	GCATGC	2 cut(s)	40, 1250
PasI	CCCWGGG	1 cut(s)	217
PceI	AGGCCT	1 cut(s)	1969
PciI	ACATGT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	4 cut(s)	54, 63, 66, 414
PctI	GAATGC	3 cut(s)	735, 1596, 1778
PfeI	GAWTC	3 cut(s)	83, 619, 843
PflFI	GACNNNGTC	1 cut(s)	1463
PflMI	CCANNNNNTGG	2 cut(s)	229, 1492
PfoI	TCCNGGA	2 cut(s)	228, 252
PleI	GAGTC	3 cut(s)	182, 1114, 1194
PmaCI	CACGTG	1 cut(s)	418
PmlI	CACGTG	1 cut(s)	418
PpsI	GAGTC	3 cut(s)	182, 1114, 1194
Ppu21I	YACGTR	1 cut(s)	418
PpuMI	RGGWCCY	1 cut(s)	226
PscI	ACATGT	1 cut(s)	426
PshAI	GACNNNNGTC	1 cut(s)	1981
Psp124BI	GAGCTC	1 cut(s)	1695
Psp5II	RGGWCCY	1 cut(s)	226
Psp6I	CCWGG	8 cut(s)	216, 222, 228, 252, 276, 1626, 1669, 1876
PspCI	CACGTG	1 cut(s)	418
PspFI	CCCAGC	1 cut(s)	1999
PspGI	CCWGG	8 cut(s)	216, 222, 228, 252, 276, 1626, 1669, 1876
PspN4I	GGNNCC	8 cut(s)	215, 234, 251, 263, 1039, 1112, 1412, 1476
PspPI	GGNCC	9 cut(s)	213, 220, 226, 232, 250, 1111, 1423, 1667, 1716
PspPPI	RGGWCCY	1 cut(s)	226
PstI	CTGCAG	2 cut(s)	438, 820
PstNI	CAGNNNCTG	1 cut(s)	229
PsyI	GACNNNGTC	1 cut(s)	1463
PvuII	CAGCTG	2 cut(s)	439, 890
RsaI	GTAC	6 cut(s)	458, 833, 1476, 1829, 1868, 1928
RsaNI	GTAC	6 cut(s)	457, 832, 1475, 1828, 1867, 1927
RseI	CAYNNNNRTG	3 cut(s)	470, 1235, 1835
SacI	GAGCTC	1 cut(s)	1695
SaqAI	TTAA	3 cut(s)	1190, 1940, 1946
Sau3AI	GATC	8 cut(s)	300, 330, 571, 641, 1404, 1498, 1522, 2056
Sau96I	GGNCC	9 cut(s)	213, 220, 226, 232, 250, 1111, 1423, 1667, 1716
SchI	GAGTC	3 cut(s)	182, 1114, 1194
SduI	GDGCHC	2 cut(s)	393, 1695
SexAI	ACCWGGT	1 cut(s)	1876
SfaNI	GCATC	1 cut(s)	1942
SfcI	CTRYAG	2 cut(s)	434, 816
SfuI	TTCGAA	1 cut(s)	102
SinI	GGWCC	4 cut(s)	213, 226, 232, 250
SmiMI	CAYNNNNRTG	3 cut(s)	470, 1235, 1835
SmlI	CTYRAG	2 cut(s)	952, 1508
SmoI	CTYRAG	2 cut(s)	952, 1508
SphI	GCATGC	2 cut(s)	40, 1250
Sse9I	AATT	5 cut(s)	155, 784, 1182, 1277, 1905
SseBI	AGGCCT	1 cut(s)	1969
SspI	AATATT	1 cut(s)	909
SstI	GAGCTC	1 cut(s)	1695
StuI	AGGCCT	1 cut(s)	1969
StyI	CCWWGG	1 cut(s)	471
TaaI	ACNGT	9 cut(s)	140, 382, 388, 652, 664, 763, 1054, 1479, 1643
TaiI	ACGT	3 cut(s)	51, 411, 420
TaqI	TCGA	7 cut(s)	102, 303, 329, 1748, 1764, 1972, 1985
TaqII	GACCGA	1 cut(s)	220
TasI	AATT	5 cut(s)	155, 784, 1182, 1277, 1905
TauI	GCSGC	5 cut(s)	180, 198, 727, 809, 1080
TfiI	GAWTC	3 cut(s)	83, 619, 843
Tru1I	TTAA	3 cut(s)	1190, 1940, 1946
Tru9I	TTAA	3 cut(s)	1190, 1940, 1946
TscAI	CASTG	6 cut(s)	145, 651, 669, 766, 1201, 1687
TseFI	GTSAC	7 cut(s)	49, 182, 382, 646, 1210, 1685, 1810
TseI	GCWGC	8 cut(s)	433, 436, 505, 815, 1373, 1623, 1656, 1895
Tsp45I	GTSAC	7 cut(s)	49, 182, 382, 646, 1210, 1685, 1810
TspDTI	ATGAA	6 cut(s)	126, 670, 1407, 1711, 1941, 1951
TspGWI	ACGGA	2 cut(s)	419, 1169
TspRI	CASTG	6 cut(s)	145, 651, 669, 766, 1201, 1687
Tth111I	GACNNNGTC	1 cut(s)	1463
Van91I	CCANNNNNTGG	2 cut(s)	229, 1492
VpaK11BI	GGWCC	4 cut(s)	213, 226, 232, 250
XagI	CCTNNNNNAGG	2 cut(s)	221, 1418
XapI	RAATTY	1 cut(s)	155
XceI	RCATGY	7 cut(s)	40, 166, 430, 828, 1008, 1250, 1663
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1031, 1384
XmiI	GTMKAC	1 cut(s)	1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.