Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Forward (+)

30299597 .. 30305722

Gene Structure 6126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG278200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGCCTATAGAGCAAGAGATTTCTCACTCGTCGCGCATGCACCACTACATGACACAAGAAGACGATGACAGCTCTGAGGTAGAAGAGAGAGTATTTGAGGACTACGAAGACGACGACGAAGACGCAGAAGATGAGGATGACAGTGGCAGAGGGAGTAAATTCTGCATGTTCACTGCATGCGGTGGTGGCTCTGGCCGCAGAAGACCGAGTTGGTCTCTGGGCCAGGTCCTGGACCCGCGAGCCAAGTGGATCCAGGAATGGAACCGGGTTTTCCTGCTGGTGTGCGCCACGGGGCTCGTGATAGACCCTCTGTTCTTCTACTCTCTGTCAATCAGTGAGAGATGTATGTGTCTGTTTGTGGACGGCTGGTTTGCGATAACGGTGACGGTGCTCCGGTGCATGACGGACGTGTTGCACGTGTGGAACATGTGGCTGCAGCTGAAGACGGCGAAGAGGTACTCCTTCACGGCGATGGTTGGTGGTGGTGAAGGGACAAACAATGGGCTGCGTGACACCAGTCCACGCTCTGTGGCGATGAGATATTTGAAGGGCAAGAAGGGGTTTTTGTTTGACCTCTTTGTTATTCTGCCTATCCCCCAGATGGTATTATGGGTCGTGATTCCTGCATTATTGGAGAAGGGATCGGTGACGGTGGTGATGACAGTGTTCTTGATGTTTTTCATTCAATATCTCCCGAAAATCTATCACTCGGTTTGCCTCTTGCGCCGAATGCAAAACCTCTCTGGCTACATCTTTGGCACCGTTTGGTGGGGAATAGCCCTCAACTTGATTGCATATTTTGTTGCGGCCCATGCTGCAGGAGCATGTTGGTACTTGTTAGGAATCCAAAGGGCAGAGAAGTGCCTGAAAGAGCAATGCAGGGAAGCAGCTGGTTGTGGAATGAGAATATTATCTTGCAAAGACCCATTTTATTATGGAAAAGAAACCAGCTTGAGAGACAGAGCAAGAATAGCATGGGCAAACAACAAGCAAGCAAGGTCTACGTGCTTGGAGAGTCCAGACCATTACGACTATGGAGCCTTTGCATGGACTGTTCAACTTTTCACAAATGACAGCCGCTTGGAAAAGATACTTTTCCCTATCTTTTGGGGCCTAATGACTCTCAGCACCTTTGGGAACTTGGAAAGCTCAACGGAATGGTTAGAGGTTGTCTTCAACATAATTGTTTTAACCAGTGGACTCCTTTTGGTCACTATGTTGATAGGAAACATAAAGGTGTTTTTGCATGCAACCACTTCAAAGAAACAAGCAATGCAATTGAAGATGAGAAACATAGAGTGGTGGATGAGGAAGAGGCACTTGCCTATGGAGTTCAGGCAACGGGTGCGCAACTACGAGCGTCAACGATGGGCAGCCATGCGTGGTGTCGATGAATGTGAGATGATCAGGAACCTTCCCGAGGGCCTTAGAAGGGATATCAAGTATCACCTATGCTTGGACTTGGTCAGACAGCTTAGTCGGGAACCCCCAAGTCTAGCTTTCGAATCCCAGCTCCATCCCGTGGCCAGCAGATTTGAGGGATCCTTTGGATTCGTGCGTCTGCGGTGCAGTGGATTAGTCTGGTTTTGCCTGGCTTTTGCAGCAATGTCGATGCAGGTATCCTGGTGCTGGGATACCACTGCATGGGTACCATTATTCCAATATATGGATGATCTGGTTCTTGAGAACATTTGTGATCGCGTCAAGTCTCTTATATTCCCAAAAGGAGAAACAATTACAAGGGAGGGAGACCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGGCATCTTCAAAGCAGCCAAGTTCTCAGAGATGGTGTGAAAAGTTGCTGCATGTTAGGCCCTGGAAACTTCAGTGGCGACGAGCTCTTGTCGTGGTGTCTCAGAAGGCCCTTCATAGAAAGACTACCACCATCTTCCTCGACACTAATTACTCTCGAAACCACGGAAGCATTCAGCCTTGAAGCAGAGGATGTCAAATACGTGACTCAACATTTTCGGTACACATTTGTGAATGAAAAGGTCAAGAGAAGTGCAAGGTACTACTCACCAGGTTGGAGGACATGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGGAGGTACAAGCATCGCTTAACGCTAACTTCATTGTCGTTTATAAGGCCTCGAAGACCCCTGTCGAGATGTTCATCACTGGGAGAGGACAGGCTGAGACTCTACACAGCTTTGTTGACTTCTCCAAAGCCAAATGATCAAGATGATTTTTTGATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

751

Amino Acids

86.93

Weight (kDa)

8.57

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	573 - 660	6.8e-08	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2138
AasI	GACNNNNNNGTC	1 cut(s)	1476
Acc16I	TGCGCA	1 cut(s)	1349
Acc36I	ACCTGC	1 cut(s)	1606
Acc65I	GGTACC	1 cut(s)	1648
AccB1I	GGYRCC	2 cut(s)	758, 1648
AccB7I	CCANNNNNTGG	4 cut(s)	229, 1522, 1644, 1666
AccI	GTMKAC	1 cut(s)	1001
AccII	CGCG	3 cut(s)	34, 238, 1701
AciI	CCGC	6 cut(s)	180, 196, 236, 806, 1078, 1564
AclWI	GGATC	5 cut(s)	244, 257, 649, 1536, 1549
AcoI	YGGCCR	2 cut(s)	193, 1524
AcsI	RAATTY	1 cut(s)	158
AcuI	CTGAAG	2 cut(s)	461, 1837
AcvI	CACGTG	1 cut(s)	418
AfaI	GTAC	6 cut(s)	458, 833, 1650, 2003, 2042, 2102
AflIII	ACRYGT	3 cut(s)	408, 417, 426
AgsI	TTSAA	9 cut(s)	547, 686, 1058, 1177, 1260, 1282, 1760, 1793, 1964
AjiI	CACGTC	1 cut(s)	409
AjnI	CCWGG	7 cut(s)	222, 228, 252, 1590, 1622, 1843, 2050
AjuI	GAANNNNNNNTTGG	2 cut(s)	193, 225
AleI	CACNNNNGTG	1 cut(s)	2009
AloI	GAACNNNNNNTCC	2 cut(s)	1740, 1772
Alw21I	GWGCWC	2 cut(s)	393, 1869
Alw26I	GTCTC	6 cut(s)	219, 951, 1713, 1743, 1886, 2185
AlwI	GGATC	5 cut(s)	244, 257, 649, 1536, 1549
AlwNI	CAGNNNCTG	1 cut(s)	229
Ama87I	CYCGRG	1 cut(s)	1418
AoxI	GGCC	9 cut(s)	193, 220, 807, 1111, 1423, 1524, 1840, 1889, 2141
ApoI	RAATTY	1 cut(s)	158
ArsI	GACNNNNNNTTYG	2 cut(s)	353, 385
Asp718I	GGTACC	1 cut(s)	1648
AspLEI	GCGC	4 cut(s)	36, 287, 726, 1350
AspS9I	GGNCC	8 cut(s)	220, 226, 232, 808, 1111, 1423, 1841, 1890
AsuC2I	CCSGG	1 cut(s)	266
AsuHPI	GGTGA	6 cut(s)	394, 497, 658, 667, 1439, 2040
AsuII	TTCGAA	1 cut(s)	1503
AvaI	CYCGRG	1 cut(s)	1418
AvaII	GGWCC	2 cut(s)	226, 232
BalI	TGGCCA	1 cut(s)	1526
BamHI	GGATCC	2 cut(s)	249, 1541
BanI	GGYRCC	2 cut(s)	758, 1648
BanII	GRGCYC	2 cut(s)	297, 1869
BauI	CACGAG	1 cut(s)	296
BbrPI	CACGTG	1 cut(s)	418
BbsI	GAAGAC	7 cut(s)	66, 114, 126, 208, 449, 1165, 2155
Bbv12I	GWGCWC	2 cut(s)	393, 1869
BccI	CCATC	6 cut(s)	466, 595, 1362, 1524, 1808, 1921
BceAI	ACGGC	3 cut(s)	379, 462, 483
BcgI	CGANNNNNNTGC	2 cut(s)	1590, 1624
BciT130I	CCWGG	7 cut(s)	224, 230, 254, 1592, 1624, 1845, 2052
BciVI	GTATCC	2 cut(s)	1627, 1630
BclI	TGATCA	2 cut(s)	1404, 2230
BcnI	CCSGG	1 cut(s)	266
BcoDI	GTCTC	6 cut(s)	219, 951, 1713, 1743, 1886, 2185
BfaI	CTAG	1 cut(s)	1496
BfmI	CTRYAG	3 cut(s)	6, 434, 816
BfuAI	ACCTGC	1 cut(s)	1606
BfuI	GTATCC	2 cut(s)	1627, 1630
Bme1390I	CCNGG	8 cut(s)	224, 230, 254, 266, 1592, 1624, 1845, 2052
Bme18I	GGWCC	2 cut(s)	226, 232
BmeT110I	CYCGRG	1 cut(s)	1418
BmgBI	CACGTC	1 cut(s)	409
BmgT120I	GGNCC	8 cut(s)	220, 226, 232, 808, 1111, 1423, 1841, 1890
BmrFI	CCNGG	8 cut(s)	224, 230, 254, 266, 1592, 1624, 1845, 2052
BmrI	ACTGGG	2 cut(s)	1748, 2183
BmsI	GCATC	3 cut(s)	1602, 1795, 2116
BmuI	ACTGGG	2 cut(s)	1748, 2183
BoxI	GACNNNNGTC	2 cut(s)	516, 2155
BpiI	GAAGAC	7 cut(s)	66, 114, 126, 208, 449, 1165, 2155
BplI	GAGNNNNNCTC	2 cut(s)	199, 231
Bpu14I	TTCGAA	1 cut(s)	1503
BpuEI	CTTGAG	2 cut(s)	973, 1703
BpuMI	CCSGG	1 cut(s)	266
BsaAI	YACGTR	3 cut(s)	418, 1005, 1984
BsaBI	GATNNNNATC	1 cut(s)	2167
BsaI	GGTCTC	2 cut(s)	219, 1743
BsaJI	CCNNGG	5 cut(s)	288, 1419, 1521, 1843, 1944
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	2 cut(s)	1740, 1770
Bse1I	ACTGG	4 cut(s)	516, 1194, 1754, 2178
Bse3DI	GCAATG	3 cut(s)	881, 1278, 1611
Bse8I	GATNNNNATC	1 cut(s)	2167
BseBI	CCWGG	7 cut(s)	224, 230, 254, 1592, 1624, 1845, 2052
BseDI	CCNNGG	5 cut(s)	288, 1419, 1521, 1843, 1944
BseGI	GGATG	5 cut(s)	142, 1311, 1516, 1675, 1978
BseJI	GATNNNNATC	1 cut(s)	2167
BseMI	GCAATG	3 cut(s)	881, 1278, 1611
BseMII	CTCAG	5 cut(s)	66, 1138, 1822, 1897, 2180
BseNI	ACTGG	4 cut(s)	516, 1194, 1754, 2178
BseRI	GAGGAG	1 cut(s)	2110
BseYI	CCCAGC	2 cut(s)	1509, 1629
BsgI	GTGCAG	1 cut(s)	1588
Bsh1236I	CGCG	3 cut(s)	34, 238, 1701
BshFI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1526, 1842, 1891, 2143
BshNI	GGYRCC	2 cut(s)	758, 1648
BsiHKAI	GWGCWC	2 cut(s)	393, 1869
BsiHKCI	CYCGRG	1 cut(s)	1418
BsiSI	CCGG	2 cut(s)	265, 394
BslFI	GGGAC	1 cut(s)	505
BsmAI	GTCTC	6 cut(s)	219, 951, 1713, 1743, 1886, 2185
BsmFI	GGGAC	1 cut(s)	505
BsmI	GAATGC	3 cut(s)	735, 1770, 1952
BsnI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1526, 1842, 1891, 2143
Bso31I	GGTCTC	2 cut(s)	219, 1743
BsoBI	CYCGRG	1 cut(s)	1418
Bsp119I	TTCGAA	1 cut(s)	1503
Bsp1286I	GDGCHC	3 cut(s)	297, 393, 1869
Bsp143I	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
BspACI	CCGC	6 cut(s)	180, 196, 236, 806, 1078, 1564
BspANI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1526, 1842, 1891, 2143
BspCNI	CTCAG	5 cut(s)	67, 1137, 1821, 1896, 2181
BspFNI	CGCG	3 cut(s)	34, 238, 1701
BspMAI	CTGCAG	2 cut(s)	438, 820
BspMI	ACCTGC	1 cut(s)	1606
BspPI	GGATC	5 cut(s)	244, 257, 649, 1536, 1549
BspT104I	TTCGAA	1 cut(s)	1503
BspT107I	GGYRCC	2 cut(s)	758, 1648
BspTNI	GGTCTC	2 cut(s)	219, 1743
BsrDI	GCAATG	3 cut(s)	881, 1278, 1611
BsrI	ACTGG	4 cut(s)	516, 1194, 1754, 2178
BssECI	CCNNGG	5 cut(s)	288, 1419, 1521, 1843, 1944
BssMI	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
BssSI	CACGAG	1 cut(s)	296
Bst2BI	CACGAG	1 cut(s)	296
Bst2UI	CCWGG	7 cut(s)	224, 230, 254, 1592, 1624, 1845, 2052
Bst4CI	ACNGT	7 cut(s)	143, 382, 388, 652, 664, 763, 1054
Bst6I	CTCTTC	3 cut(s)	78, 446, 1307
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstBAI	YACGTR	3 cut(s)	418, 1005, 1984
BstBI	TTCGAA	1 cut(s)	1503
BstC8I	GCNNGC	6 cut(s)	38, 178, 240, 993, 1248, 1528
BstDEI	CTNAG	7 cut(s)	75, 1124, 1427, 1475, 1808, 1883, 2189
BstDSI	CCRYGG	3 cut(s)	288, 1521, 1944
BstENI	CCTNNNNNAGG	1 cut(s)	1418
BstF5I	GGATG	5 cut(s)	142, 1311, 1516, 1675, 1978
BstFNI	CGCG	3 cut(s)	34, 238, 1701
BstHHI	GCGC	4 cut(s)	36, 287, 726, 1350
BstKTI	GATC	7 cut(s)	252, 644, 1407, 1544, 1675, 1699, 2233
BstMAI	GTCTC	6 cut(s)	219, 951, 1713, 1743, 1886, 2185
BstMBI	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
BstNI	CCWGG	7 cut(s)	224, 230, 254, 1592, 1624, 1845, 2052
BstNSI	RCATGY	7 cut(s)	40, 169, 180, 430, 828, 1250, 1837
BstPAI	GACNNNNGTC	2 cut(s)	516, 2155
BstSCI	CCNGG	8 cut(s)	222, 228, 252, 264, 1590, 1622, 1843, 2050
BstSFI	CTRYAG	3 cut(s)	6, 434, 816
BstUI	CGCG	3 cut(s)	34, 238, 1701
BstV2I	GAAGAC	7 cut(s)	66, 114, 126, 208, 449, 1165, 2155
BstX2I	RGATCY	2 cut(s)	249, 1541
BstYI	RGATCY	2 cut(s)	249, 1541
BsuI	GTATCC	2 cut(s)	1627, 1630
BsuRI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1526, 1842, 1891, 2143
BtgI	CCRYGG	3 cut(s)	288, 1521, 1944
BtgZI	GCGATG	3 cut(s)	485, 548, 2093
BtrI	CACGTC	1 cut(s)	409
BtsCI	GGATG	5 cut(s)	142, 1311, 1516, 1675, 1978
BtsI	GCAGTG	3 cut(s)	171, 1576, 1638
BtsIMutI	CAGTG	9 cut(s)	148, 171, 340, 669, 1201, 1576, 1638, 1861, 2171
BveI	ACCTGC	1 cut(s)	1606
Cac8I	GCNNGC	6 cut(s)	38, 178, 240, 993, 1248, 1528
CaiI	CAGNNNCTG	1 cut(s)	229
CfoI	GCGC	4 cut(s)	36, 287, 726, 1350
Cfr13I	GGNCC	8 cut(s)	220, 226, 232, 808, 1111, 1423, 1841, 1890
CseI	GACGC	4 cut(s)	131, 1349, 1547, 1690
CsiI	ACCWGGT	1 cut(s)	2050
Csp6I	GTAC	6 cut(s)	457, 832, 1649, 2002, 2041, 2101
CviQI	GTAC	6 cut(s)	457, 832, 1649, 2002, 2041, 2101
DdeI	CTNAG	7 cut(s)	75, 1124, 1427, 1475, 1808, 1883, 2189
DpnI	GATC	7 cut(s)	251, 643, 1406, 1543, 1674, 1698, 2232
DpnII	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
DrdI	GACNNNNNNGTC	1 cut(s)	1476
DseDI	GACNNNNNNGTC	1 cut(s)	1476
EaeI	YGGCCR	2 cut(s)	193, 1524
Eam1104I	CTCTTC	3 cut(s)	78, 446, 1307
EarI	CTCTTC	3 cut(s)	78, 446, 1307
Ecl136II	GAGCTC	1 cut(s)	1867
Eco147I	AGGCCT	1 cut(s)	2143
Eco24I	GRGCYC	2 cut(s)	297, 1869
Eco31I	GGTCTC	2 cut(s)	219, 1743
Eco32I	GATATC	1 cut(s)	1438
Eco47I	GGWCC	2 cut(s)	226, 232
Eco53kI	GAGCTC	1 cut(s)	1867
Eco57I	CTGAAG	2 cut(s)	461, 1837
Eco72I	CACGTG	1 cut(s)	418
Eco88I	CYCGRG	1 cut(s)	1418
EcoICRI	GAGCTC	1 cut(s)	1867
EcoNI	CCTNNNNNAGG	1 cut(s)	1418
EcoO109I	RGGNCCY	5 cut(s)	226, 1111, 1423, 1841, 1890
EcoRII	CCWGG	7 cut(s)	222, 228, 252, 1590, 1622, 1843, 2050
EcoRV	GATATC	1 cut(s)	1438
EcoT38I	GRGCYC	2 cut(s)	297, 1869
FalI	AAGNNNNNCTT	6 cut(s)	1304, 1336, 1483, 1515, 2096, 2128
FaqI	GGGAC	1 cut(s)	505
FauI	CCCGC	1 cut(s)	243
FbaI	TGATCA	2 cut(s)	1404, 2230
FblI	GTMKAC	1 cut(s)	1001
FokI	GGATG	5 cut(s)	149, 1318, 1503, 1682, 1985
FriOI	GRGCYC	2 cut(s)	297, 1869
FspBI	CTAG	1 cut(s)	1496
FspI	TGCGCA	1 cut(s)	1349
GlaI	GCGC	4 cut(s)	35, 286, 725, 1349
GsaI	CCCAGC	2 cut(s)	1513, 1633
HaeIII	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1526, 1842, 1891, 2143
HapII	CCGG	2 cut(s)	265, 394
HgaI	GACGC	4 cut(s)	131, 1349, 1547, 1690
HhaI	GCGC	4 cut(s)	36, 287, 726, 1350
Hin6I	GCGC	4 cut(s)	34, 285, 724, 1348
HinP1I	GCGC	4 cut(s)	34, 285, 724, 1348
HincII	GTYRAC	2 cut(s)	1364, 2211
HindII	GTYRAC	2 cut(s)	1364, 2211
HinfI	GANTC	9 cut(s)	619, 843, 1015, 1120, 1200, 1505, 1551, 1987, 2193
HpaII	CCGG	2 cut(s)	265, 394
HphI	GGTGA	6 cut(s)	394, 497, 658, 667, 1439, 2040
Hpy166II	GTNNAC	8 cut(s)	171, 361, 521, 1002, 1199, 1364, 2004, 2211
Hpy188I	TCNGA	4 cut(s)	76, 1469, 1811, 1886
Hpy8I	GTNNAC	8 cut(s)	171, 361, 521, 1002, 1199, 1364, 2004, 2211
Hpy99I	CGWCG	4 cut(s)	34, 116, 119, 1865
HpyAV	CCTTC	9 cut(s)	472, 482, 541, 550, 631, 1424, 1425, 1881, 1903
HpyCH4III	ACNGT	7 cut(s)	143, 382, 388, 652, 664, 763, 1054
HpyCH4IV	ACGT	4 cut(s)	408, 417, 1004, 1983
HpyF3I	CTNAG	7 cut(s)	75, 1124, 1427, 1475, 1808, 1883, 2189
HpySE526I	ACGT	4 cut(s)	408, 417, 1004, 1983
HspAI	GCGC	4 cut(s)	34, 285, 724, 1348
KpnI	GGTACC	1 cut(s)	1652
Ksp22I	TGATCA	2 cut(s)	1404, 2230
Kzo9I	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
LmnI	GCTCC	4 cut(s)	396, 821, 1037, 1518
LweI	GCATC	3 cut(s)	1602, 1795, 2116
MabI	ACCWGGT	1 cut(s)	2050
MaeI	CTAG	1 cut(s)	1496
MaeII	ACGT	4 cut(s)	408, 417, 1004, 1983
MaeIII	GTNAC	5 cut(s)	382, 509, 646, 1210, 1984
MalI	GATC	7 cut(s)	251, 643, 1406, 1543, 1674, 1698, 2232
MboI	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
MfeI	CAATTG	1 cut(s)	1277
MflI	RGATCY	2 cut(s)	249, 1541
MhlI	GDGCHC	3 cut(s)	297, 393, 1869
MlsI	TGGCCA	1 cut(s)	1526
MluCI	AATT	6 cut(s)	158, 1182, 1277, 1734, 1929, 2079
MluNI	TGGCCA	1 cut(s)	1526
MlyI	GAGTC	5 cut(s)	1024, 1114, 1194, 1981, 2187
MmeI	TCCRAC	1 cut(s)	2036
Mox20I	TGGCCA	1 cut(s)	1526
MscI	TGGCCA	1 cut(s)	1526
MseI	TTAA	2 cut(s)	1190, 2114
MslI	CAYNNNNRTG	3 cut(s)	470, 1235, 2009
Msp20I	TGGCCA	1 cut(s)	1526
MspA1I	CMGCKG	2 cut(s)	439, 890
MspI	CCGG	2 cut(s)	265, 394
MspR9I	CCNGG	8 cut(s)	224, 230, 254, 266, 1592, 1624, 1845, 2052
MunI	CAATTG	1 cut(s)	1277
Mva1269I	GAATGC	3 cut(s)	735, 1770, 1952
MvaI	CCWGG	7 cut(s)	224, 230, 254, 1592, 1624, 1845, 2052
MvnI	CGCG	3 cut(s)	34, 238, 1701
NciI	CCSGG	1 cut(s)	266
NdeII	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
NmuCI	GTSAC	5 cut(s)	382, 509, 646, 1210, 1984
NsbI	TGCGCA	1 cut(s)	1349
NspI	RCATGY	7 cut(s)	40, 169, 180, 430, 828, 1250, 1837
NspV	TTCGAA	1 cut(s)	1503
OliI	CACNNNNGTG	1 cut(s)	2009
PaeI	GCATGC	3 cut(s)	40, 180, 1250
PceI	AGGCCT	1 cut(s)	2143
PciI	ACATGT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 414
PctI	GAATGC	3 cut(s)	735, 1770, 1952
PfeI	GAWTC	4 cut(s)	619, 843, 1505, 1551
PflFI	GACNNNGTC	1 cut(s)	1463
PflMI	CCANNNNNTGG	4 cut(s)	229, 1522, 1644, 1666
PfoI	TCCNGGA	2 cut(s)	228, 252
PleI	GAGTC	5 cut(s)	1023, 1114, 1194, 1981, 2187
PmaCI	CACGTG	1 cut(s)	418
PmlI	CACGTG	1 cut(s)	418
PpsI	GAGTC	5 cut(s)	1023, 1114, 1194, 1981, 2187
Ppu21I	YACGTR	3 cut(s)	418, 1005, 1984
PpuMI	RGGWCCY	1 cut(s)	226
PscI	ACATGT	1 cut(s)	426
PshAI	GACNNNNGTC	2 cut(s)	516, 2155
PsiI	TTATAA	1 cut(s)	2138
Psp124BI	GAGCTC	1 cut(s)	1869
Psp5II	RGGWCCY	1 cut(s)	226
Psp6I	CCWGG	7 cut(s)	222, 228, 252, 1590, 1622, 1843, 2050
PspCI	CACGTG	1 cut(s)	418
PspFI	CCCAGC	2 cut(s)	1509, 1629
PspGI	CCWGG	7 cut(s)	222, 228, 252, 1590, 1622, 1843, 2050
PspPI	GGNCC	8 cut(s)	220, 226, 232, 808, 1111, 1423, 1841, 1890
PspPPI	RGGWCCY	1 cut(s)	226
PstI	CTGCAG	2 cut(s)	438, 820
PstNI	CAGNNNCTG	1 cut(s)	229
PsuI	RGATCY	2 cut(s)	249, 1541
PsyI	GACNNNGTC	1 cut(s)	1463
PvuII	CAGCTG	2 cut(s)	439, 890
RsaI	GTAC	6 cut(s)	458, 833, 1650, 2003, 2042, 2102
RsaNI	GTAC	6 cut(s)	457, 832, 1649, 2002, 2041, 2101
RseI	CAYNNNNRTG	3 cut(s)	470, 1235, 2009
SacI	GAGCTC	1 cut(s)	1869
SaqAI	TTAA	2 cut(s)	1190, 2114
Sau3AI	GATC	7 cut(s)	249, 641, 1404, 1541, 1672, 1696, 2230
Sau96I	GGNCC	8 cut(s)	220, 226, 232, 808, 1111, 1423, 1841, 1890
SchI	GAGTC	5 cut(s)	1024, 1114, 1194, 1981, 2187
ScrFI	CCNGG	8 cut(s)	224, 230, 254, 266, 1592, 1624, 1845, 2052
SduI	GDGCHC	3 cut(s)	297, 393, 1869
SexAI	ACCWGGT	1 cut(s)	2050
SfaNI	GCATC	3 cut(s)	1602, 1795, 2116
SfcI	CTRYAG	3 cut(s)	6, 434, 816
SfuI	TTCGAA	1 cut(s)	1503
SinI	GGWCC	2 cut(s)	226, 232
SmiMI	CAYNNNNRTG	3 cut(s)	470, 1235, 2009
SmlI	CTYRAG	2 cut(s)	952, 1682
SmoI	CTYRAG	2 cut(s)	952, 1682
SphI	GCATGC	3 cut(s)	40, 180, 1250
Sse9I	AATT	6 cut(s)	158, 1182, 1277, 1734, 1929, 2079
SseBI	AGGCCT	1 cut(s)	2143
SsiI	CCGC	6 cut(s)	180, 196, 236, 806, 1078, 1564
SspI	AATATT	1 cut(s)	909
SspMI	CTAG	1 cut(s)	1496
SstI	GAGCTC	1 cut(s)	1869
StuI	AGGCCT	1 cut(s)	2143
StyD4I	CCNGG	8 cut(s)	222, 228, 252, 264, 1590, 1622, 1843, 2050
TaaI	ACNGT	7 cut(s)	143, 382, 388, 652, 664, 763, 1054
TaiI	ACGT	4 cut(s)	411, 420, 1007, 1986
TaqI	TCGA	7 cut(s)	1389, 1503, 1610, 1922, 1938, 2146, 2159
TaqII	GACCGA	1 cut(s)	220
TasI	AATT	6 cut(s)	158, 1182, 1277, 1734, 1929, 2079
TauI	GCSGC	3 cut(s)	198, 809, 1080
TfiI	GAWTC	4 cut(s)	619, 843, 1505, 1551
Tru1I	TTAA	2 cut(s)	1190, 2114
Tru9I	TTAA	2 cut(s)	1190, 2114
TscAI	CASTG	9 cut(s)	148, 178, 340, 669, 1201, 1576, 1645, 1861, 2178
TseFI	GTSAC	5 cut(s)	382, 509, 646, 1210, 1984
Tsp45I	GTSAC	5 cut(s)	382, 509, 646, 1210, 1984
TspDTI	ATGAA	6 cut(s)	670, 1407, 1885, 2031, 2115, 2157
TspGWI	ACGGA	3 cut(s)	419, 1169, 1961
TspRI	CASTG	9 cut(s)	148, 178, 340, 669, 1201, 1576, 1645, 1861, 2178
Tth111I	GACNNNGTC	1 cut(s)	1463
Van91I	CCANNNNNTGG	4 cut(s)	229, 1522, 1644, 1666
VpaK11BI	GGWCC	2 cut(s)	226, 232
XagI	CCTNNNNNAGG	1 cut(s)	1418
XapI	RAATTY	1 cut(s)	158
XceI	RCATGY	7 cut(s)	40, 169, 180, 430, 828, 1250, 1837
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1031
XmiI	GTMKAC	1 cut(s)	1001
XspI	CTAG	1 cut(s)	1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.