Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Forward (+)

31516160 .. 31521590

Gene Structure 5431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G022650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGAACAATAACACATATCTCTGCTGCACTCCTGCTCGGAATCAAACCTCATTCAAATTCCCTCCATCACGCAAAAACACCATGCCTATAGAGCAAGAGATTTCTCACTCGTCGCGCATGCACCACTACATGACACAAGACGACGATGACAGCTCTGAGGTAGAAGAGAGAGTATTTGAGGACTACGAAGACGACGACGAAGACGCAGAAGATGAGGATGACAGTGGCAGAGGGAGTAAATTCTGCATGTTCACTGCGTGCGGTGGTGGTTCTGGCCGCAGAAGACCGAGTTGGTCTCTGGGCCAGGTCCTGGACCCGCGAGCCAAGTGGATCCAGGAATGGAACCGGGTTTTCCTGCTGGTGTGCGCCACCGGGCTCGTCATAGACCCTCTGTTCTTCTACTCTCTGTCAATTAGCGAGAGATGTATGTGTCTGTTTGTGGACGGCTGGTTTGCGATAACGGTGACGGTGCTCCGGTGCATGACGGACGTGTTGCACGTGTGGAACATGTGGCTGCAGCTGAAGACTGCTAAGAGGTACTCCTTCACGGCGATGGTTGGTGGTGGTGAAGGGACAAACAATGGGCTGCGTGACACCAGTCCTCGCTCTGTGGCAATGAGATATTTGAAGGGCAAGAAGGGGTTTTTGTTTGACCTCTTTGTTATTCTGCCTATCCCCCAGATAGTATTATGGGTAGTGATTCCTGCATTATTGGAGAAGGGATCGGTGACGGTGGTGATGACAGTGTTCTTGATGTTTTTCATTCAATATCTCCCGAAAATCTATCACTCGGTTTGCCTCTTGCGCCGAATGCAAAACCTCTCTGGCTACATCTTTGGCACCGTTTGGTGGGGAATAGCCCTCAACTTGATTGCATATTTTGTTGCGGCCCATGCTGCAGGAGCATGTTGGTACTTGTTAGGAATCCAAAGGGCAGAGAAGTGCCTGAAAGAGCAATGCAGGGAAGCAGCTGGTTGTGGAATGAGAATATTATCTTGCAAGGACACATTTTATTATGGAAAAGAAACCAGCTTGAGAGACAGAGCAAGAATAGCATGGGCAAACAACAAGCAAGCAAGGTCTACGTGCTTGGAGAGTCCAGACCATTACGACTATGGAGCCTTTGCATGGACTGTTCAACTTTTCACAAATGACAGCCGCTTGGAAAAGATACTTTTCCCTATCTTTTGGGGCCTAATGACTCTCAGCACCTTTGGGAACTTGGAAAGCTCAACGGAATGGTTAGAGGTTGTCTTCAACATAATTGTTTTAACCAGTGGACTCCTTTTGGTCACTATGTTGATAGGAAACATAAAGGTGTTTTTGCATGCAACCACTTCAAAGAAACAAGCAATGCAATTGAAGATGAGAAACATAGAGTGGTGGATGAGGAAGAGGCACTTGCCTATGGAGTTCAGACAACGGGTGCGCAACTACGAGCGTCAACGATGGGCAGCCATGCGTGGTGTCGATGAATGTGAGATGATCAGGAACCTTCCCGAGGGCCTTAGAAGGGATATCAAGTATCACCTATGCTTGGACTTGGTCAGACAGGTACCATTATTCCAATATATGGATGATCTGGTTCTTGAGAACATTTGTGATCGCGTCAAGTCTCTTATATTCCCAAAAGGAGAAACAATTACAAGGGAGGGAGATCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGGCATCTTCAAAGCAGCCAAGTTCTCAGAGATGGTGTGAAAAGTTGTTGCATGTTAGGCCCTGGAAACTTCAGTGGCGACGAGCTCTTGTCATGGTGTCTCAGAAGGCCCTTCATAGAAAGACTACCACCATCTTCCTCGACACTAATTACTCTCGAAACCACGGAAGCATTCAGCCTTGAAGCAGAGGATGTCAAATACGTGACTCAACATTTTCGGTACACATTTGTGAATGAAAAGGTCAAGAGAAGTGCAAGGTACTACTCACCAGGTTGGAGGACATGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGGAGGTACAAGCATCGCTTAACGCTAACTTCATTGTCGTTTATAAGGCCTCGAAGACCCCTGTCGAGATGTTCATCACTGGGAGAGGACAGGCTGAGACTCTACACAGCTTTGTTGACTTCTCCAAAGCCAAATGATCAAGATGATTTTTTGATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

720

Amino Acids

83.44

Weight (kDa)

8.81

Isoelectric Point (pI)

52.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	542 - 629	6.4e-08	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2045
Acc16I	TGCGCA	1 cut(s)	1430
Acc65I	GGTACC	1 cut(s)	1555
AccB1I	GGYRCC	2 cut(s)	839, 1555
AccB7I	CCANNNNNTGG	2 cut(s)	310, 1573
AccI	GTMKAC	1 cut(s)	1082
AccII	CGCG	3 cut(s)	115, 319, 1608
AciI	CCGC	5 cut(s)	261, 277, 317, 887, 1159
AclWI	GGATC	4 cut(s)	325, 338, 730, 1652
AcoI	YGGCCR	1 cut(s)	274
AcsI	RAATTY	2 cut(s)	56, 239
AcuI	CTGAAG	2 cut(s)	542, 1744
AcvI	CACGTG	1 cut(s)	499
AdeI	CACNNNGTG	1 cut(s)	258
AfaI	GTAC	6 cut(s)	539, 914, 1557, 1910, 1949, 2009
AfiI	CCNNNNNNNGG	7 cut(s)	310, 849, 1128, 1501, 1513, 1537, 1573
AflIII	ACRYGT	3 cut(s)	489, 498, 507
AjiI	CACGTC	1 cut(s)	490
AjnI	CCWGG	5 cut(s)	303, 309, 333, 1750, 1957
AjuI	GAANNNNNNNTTGG	2 cut(s)	274, 306
AleI	CACNNNNGTG	1 cut(s)	1916
AloI	GAACNNNNNNTCC	2 cut(s)	1647, 1679
AluBI	AGCT	7 cut(s)	153, 520, 971, 1032, 1230, 1774, 2111
AluI	AGCT	7 cut(s)	153, 520, 971, 1032, 1230, 1774, 2111
Alw21I	GWGCWC	2 cut(s)	474, 1776
Alw26I	GTCTC	5 cut(s)	300, 1032, 1620, 1793, 2092
AlwI	GGATC	4 cut(s)	325, 338, 730, 1652
AlwNI	CAGNNNCTG	1 cut(s)	310
Ama87I	CYCGRG	1 cut(s)	1499
AoxI	GGCC	8 cut(s)	274, 301, 888, 1192, 1504, 1747, 1796, 2048
ApeKI	GCWGC	9 cut(s)	24, 514, 517, 586, 896, 968, 1454, 1704, 1976
ApoI	RAATTY	2 cut(s)	56, 239
ArsI	GACNNNNNNTTYG	2 cut(s)	434, 466
Asp718I	GGTACC	1 cut(s)	1555
AspLEI	GCGC	4 cut(s)	117, 368, 807, 1431
AspS9I	GGNCC	8 cut(s)	301, 307, 313, 889, 1192, 1504, 1748, 1797
AsuC2I	CCSGG	2 cut(s)	347, 373
AsuHPI	GGTGA	6 cut(s)	475, 578, 739, 748, 1520, 1947
AvaI	CYCGRG	1 cut(s)	1499
AvaII	GGWCC	2 cut(s)	307, 313
BamHI	GGATCC	1 cut(s)	330
BanI	GGYRCC	2 cut(s)	839, 1555
BanII	GRGCYC	2 cut(s)	378, 1776
BbrPI	CACGTG	1 cut(s)	499
BbsI	GAAGAC	6 cut(s)	195, 207, 289, 530, 1246, 2062
Bbv12I	GWGCWC	2 cut(s)	474, 1776
BbvI	GCAGC	9 cut(s)	11, 501, 529, 573, 883, 980, 1466, 1716, 1963
BccI	CCATC	5 cut(s)	73, 547, 1443, 1715, 1828
BceAI	ACGGC	2 cut(s)	460, 564
BciT130I	CCWGG	5 cut(s)	305, 311, 335, 1752, 1959
BclI	TGATCA	2 cut(s)	1485, 2137
BcnI	CCSGG	2 cut(s)	347, 373
BcoDI	GTCTC	5 cut(s)	300, 1032, 1620, 1793, 2092
BfmI	CTRYAG	3 cut(s)	87, 515, 897
Bme1390I	CCNGG	7 cut(s)	305, 311, 335, 347, 373, 1752, 1959
Bme18I	GGWCC	2 cut(s)	307, 313
BmeT110I	CYCGRG	1 cut(s)	1499
BmgBI	CACGTC	1 cut(s)	490
BmgT120I	GGNCC	8 cut(s)	301, 307, 313, 889, 1192, 1504, 1748, 1797
BmiI	GGNNCC	8 cut(s)	315, 332, 344, 841, 1120, 1193, 1493, 1557
BmrFI	CCNGG	7 cut(s)	305, 311, 335, 347, 373, 1752, 1959
BmrI	ACTGGG	1 cut(s)	2090
BmsI	GCATC	2 cut(s)	1702, 2023
BmuI	ACTGGG	1 cut(s)	2090
BoxI	GACNNNNGTC	2 cut(s)	597, 2062
BpiI	GAAGAC	6 cut(s)	195, 207, 289, 530, 1246, 2062
BplI	GAGNNNNNCTC	2 cut(s)	280, 312
BpuEI	CTTGAG	2 cut(s)	1054, 1610
BpuMI	CCSGG	2 cut(s)	347, 373
BsaAI	YACGTR	3 cut(s)	499, 1086, 1891
BsaBI	GATNNNNATC	1 cut(s)	2074
BsaI	GGTCTC	1 cut(s)	300
BsaJI	CCNNGG	3 cut(s)	1500, 1750, 1851
BsaWI	WCCGGW	1 cut(s)	474
BsaXI	ACNNNNNCTCC	2 cut(s)	1647, 1677
Bsc4I	CCNNNNNNNGG	7 cut(s)	310, 849, 1128, 1501, 1513, 1537, 1573
Bse1I	ACTGG	4 cut(s)	597, 1275, 1661, 2085
Bse3DI	GCAATG	3 cut(s)	621, 962, 1359
Bse8I	GATNNNNATC	1 cut(s)	2074
BseBI	CCWGG	5 cut(s)	305, 311, 335, 1752, 1959
BseDI	CCNNGG	3 cut(s)	1500, 1750, 1851
BseGI	GGATG	4 cut(s)	223, 1392, 1582, 1885
BseJI	GATNNNNATC	1 cut(s)	2074
BseLI	CCNNNNNNNGG	7 cut(s)	310, 849, 1128, 1501, 1513, 1537, 1573
BseMI	GCAATG	3 cut(s)	621, 962, 1359
BseMII	CTCAG	5 cut(s)	147, 1219, 1729, 1804, 2087
BseNI	ACTGG	4 cut(s)	597, 1275, 1661, 2085
BseRI	GAGGAG	1 cut(s)	2017
BseXI	GCAGC	9 cut(s)	11, 501, 529, 573, 883, 980, 1466, 1716, 1963
BsgI	GTGCAG	1 cut(s)	10
Bsh1236I	CGCG	3 cut(s)	115, 319, 1608
BshFI	GGCC	8 cut(s)	276, 303, 890, 1194, 1506, 1749, 1798, 2050
BshNI	GGYRCC	2 cut(s)	839, 1555
BsiHKAI	GWGCWC	2 cut(s)	474, 1776
BsiHKCI	CYCGRG	1 cut(s)	1499
BsiSI	CCGG	3 cut(s)	346, 372, 475
BslFI	GGGAC	1 cut(s)	586
BslI	CCNNNNNNNGG	7 cut(s)	310, 849, 1128, 1501, 1513, 1537, 1573
BsmAI	GTCTC	5 cut(s)	300, 1032, 1620, 1793, 2092
BsmFI	GGGAC	1 cut(s)	586
BsmI	GAATGC	3 cut(s)	816, 1677, 1859
BsnI	GGCC	8 cut(s)	276, 303, 890, 1194, 1506, 1749, 1798, 2050
Bso31I	GGTCTC	1 cut(s)	300
BsoBI	CYCGRG	1 cut(s)	1499
Bsp1286I	GDGCHC	3 cut(s)	378, 474, 1776
Bsp143I	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
BspACI	CCGC	5 cut(s)	261, 277, 317, 887, 1159
BspANI	GGCC	8 cut(s)	276, 303, 890, 1194, 1506, 1749, 1798, 2050
BspCNI	CTCAG	5 cut(s)	148, 1218, 1728, 1803, 2088
BspFNI	CGCG	3 cut(s)	115, 319, 1608
BspLI	GGNNCC	8 cut(s)	315, 332, 344, 841, 1120, 1193, 1493, 1557
BspMAI	CTGCAG	2 cut(s)	519, 901
BspPI	GGATC	4 cut(s)	325, 338, 730, 1652
BspT107I	GGYRCC	2 cut(s)	839, 1555
BspTNI	GGTCTC	1 cut(s)	300
BsrDI	GCAATG	3 cut(s)	621, 962, 1359
BsrI	ACTGG	4 cut(s)	597, 1275, 1661, 2085
BssECI	CCNNGG	3 cut(s)	1500, 1750, 1851
BssMI	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
Bst2UI	CCWGG	5 cut(s)	305, 311, 335, 1752, 1959
Bst4CI	ACNGT	7 cut(s)	224, 463, 469, 733, 745, 844, 1135
Bst6I	CTCTTC	2 cut(s)	159, 1388
BstBAI	YACGTR	3 cut(s)	499, 1086, 1891
BstC8I	GCNNGC	5 cut(s)	119, 259, 321, 1074, 1329
BstDEI	CTNAG	7 cut(s)	156, 531, 1205, 1508, 1715, 1790, 2096
BstDSI	CCRYGG	1 cut(s)	1851
BstENI	CCTNNNNNAGG	1 cut(s)	1499
BstF5I	GGATG	4 cut(s)	223, 1392, 1582, 1885
BstFNI	CGCG	3 cut(s)	115, 319, 1608
BstHHI	GCGC	4 cut(s)	117, 368, 807, 1431
BstKTI	GATC	7 cut(s)	333, 725, 1488, 1582, 1606, 1660, 2140
BstMAI	GTCTC	5 cut(s)	300, 1032, 1620, 1793, 2092
BstMBI	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
BstMWI	GCNNNNNNNGC	9 cut(s)	91, 804, 811, 893, 896, 902, 1052, 1746, 1982
BstNI	CCWGG	5 cut(s)	305, 311, 335, 1752, 1959
BstNSI	RCATGY	6 cut(s)	121, 250, 511, 909, 1331, 1744
BstPAI	GACNNNNGTC	2 cut(s)	597, 2062
BstSCI	CCNGG	7 cut(s)	303, 309, 333, 345, 371, 1750, 1957
BstSFI	CTRYAG	3 cut(s)	87, 515, 897
BstUI	CGCG	3 cut(s)	115, 319, 1608
BstV1I	GCAGC	9 cut(s)	11, 501, 529, 573, 883, 980, 1466, 1716, 1963
BstV2I	GAAGAC	6 cut(s)	195, 207, 289, 530, 1246, 2062
BstX2I	RGATCY	2 cut(s)	330, 1657
BstYI	RGATCY	2 cut(s)	330, 1657
BsuRI	GGCC	8 cut(s)	276, 303, 890, 1194, 1506, 1749, 1798, 2050
BtgI	CCRYGG	1 cut(s)	1851
BtgZI	GCGATG	2 cut(s)	566, 2000
BtrI	CACGTC	1 cut(s)	490
BtsCI	GGATG	4 cut(s)	223, 1392, 1582, 1885
BtsI	GCAGTG	1 cut(s)	252
BtsIMutI	CAGTG	6 cut(s)	229, 252, 750, 1282, 1768, 2078
Cac8I	GCNNGC	5 cut(s)	119, 259, 321, 1074, 1329
CaiI	CAGNNNCTG	1 cut(s)	310
CfoI	GCGC	4 cut(s)	117, 368, 807, 1431
Cfr13I	GGNCC	8 cut(s)	301, 307, 313, 889, 1192, 1504, 1748, 1797
CseI	GACGC	3 cut(s)	212, 1430, 1597
CsiI	ACCWGGT	1 cut(s)	1957
Csp6I	GTAC	6 cut(s)	538, 913, 1556, 1909, 1948, 2008
CviQI	GTAC	6 cut(s)	538, 913, 1556, 1909, 1948, 2008
DdeI	CTNAG	7 cut(s)	156, 531, 1205, 1508, 1715, 1790, 2096
DpnI	GATC	7 cut(s)	332, 724, 1487, 1581, 1605, 1659, 2139
DpnII	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
DraIII	CACNNNGTG	1 cut(s)	258
EaeI	YGGCCR	1 cut(s)	274
Eam1104I	CTCTTC	2 cut(s)	159, 1388
EarI	CTCTTC	2 cut(s)	159, 1388
Ecl136II	GAGCTC	1 cut(s)	1774
Eco147I	AGGCCT	1 cut(s)	2050
Eco24I	GRGCYC	2 cut(s)	378, 1776
Eco31I	GGTCTC	1 cut(s)	300
Eco32I	GATATC	1 cut(s)	1519
Eco47I	GGWCC	2 cut(s)	307, 313
Eco53kI	GAGCTC	1 cut(s)	1774
Eco57I	CTGAAG	2 cut(s)	542, 1744
Eco72I	CACGTG	1 cut(s)	499
Eco88I	CYCGRG	1 cut(s)	1499
EcoICRI	GAGCTC	1 cut(s)	1774
EcoNI	CCTNNNNNAGG	1 cut(s)	1499
EcoO109I	RGGNCCY	5 cut(s)	307, 1192, 1504, 1748, 1797
EcoRII	CCWGG	5 cut(s)	303, 309, 333, 1750, 1957
EcoRV	GATATC	1 cut(s)	1519
EcoT38I	GRGCYC	2 cut(s)	378, 1776
FalI	AAGNNNNNCTT	4 cut(s)	1385, 1417, 2003, 2035
FaqI	GGGAC	1 cut(s)	586
FauI	CCCGC	1 cut(s)	324
FbaI	TGATCA	2 cut(s)	1485, 2137
FblI	GTMKAC	1 cut(s)	1082
FokI	GGATG	4 cut(s)	230, 1399, 1589, 1892
FriOI	GRGCYC	2 cut(s)	378, 1776
FspI	TGCGCA	1 cut(s)	1430
GlaI	GCGC	4 cut(s)	116, 367, 806, 1430
HaeIII	GGCC	8 cut(s)	276, 303, 890, 1194, 1506, 1749, 1798, 2050
HapII	CCGG	3 cut(s)	346, 372, 475
HgaI	GACGC	3 cut(s)	212, 1430, 1597
HhaI	GCGC	4 cut(s)	117, 368, 807, 1431
Hin6I	GCGC	4 cut(s)	115, 366, 805, 1429
HinP1I	GCGC	4 cut(s)	115, 366, 805, 1429
HincII	GTYRAC	2 cut(s)	1445, 2118
HindII	GTYRAC	2 cut(s)	1445, 2118
HinfI	GANTC	8 cut(s)	40, 700, 924, 1096, 1201, 1281, 1894, 2100
HpaII	CCGG	3 cut(s)	346, 372, 475
HphI	GGTGA	6 cut(s)	475, 578, 739, 748, 1520, 1947
Hpy166II	GTNNAC	7 cut(s)	252, 442, 1083, 1280, 1445, 1911, 2118
Hpy188I	TCNGA	6 cut(s)	39, 157, 1418, 1550, 1718, 1793
Hpy8I	GTNNAC	7 cut(s)	252, 442, 1083, 1280, 1445, 1911, 2118
Hpy99I	CGWCG	5 cut(s)	115, 146, 197, 200, 1772
HpyAV	CCTTC	9 cut(s)	553, 563, 622, 631, 712, 1505, 1506, 1788, 1810
HpyCH4III	ACNGT	7 cut(s)	224, 463, 469, 733, 745, 844, 1135
HpyCH4IV	ACGT	4 cut(s)	489, 498, 1085, 1890
HpyF10VI	GCNNNNNNNGC	9 cut(s)	91, 804, 811, 893, 896, 902, 1052, 1746, 1982
HpyF3I	CTNAG	7 cut(s)	156, 531, 1205, 1508, 1715, 1790, 2096
HpySE526I	ACGT	4 cut(s)	489, 498, 1085, 1890
HspAI	GCGC	4 cut(s)	115, 366, 805, 1429
KpnI	GGTACC	1 cut(s)	1559
Ksp22I	TGATCA	2 cut(s)	1485, 2137
Kzo9I	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
LmnI	GCTCC	3 cut(s)	477, 902, 1118
Lsp1109I	GCAGC	9 cut(s)	11, 501, 529, 573, 883, 980, 1466, 1716, 1963
LweI	GCATC	2 cut(s)	1702, 2023
MabI	ACCWGGT	1 cut(s)	1957
MaeII	ACGT	4 cut(s)	489, 498, 1085, 1890
MaeIII	GTNAC	5 cut(s)	463, 590, 727, 1291, 1891
MalI	GATC	7 cut(s)	332, 724, 1487, 1581, 1605, 1659, 2139
MboI	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
MfeI	CAATTG	1 cut(s)	1358
MflI	RGATCY	2 cut(s)	330, 1657
MhlI	GDGCHC	3 cut(s)	378, 474, 1776
MluCI	AATT	8 cut(s)	56, 239, 411, 1263, 1358, 1641, 1836, 1986
MlyI	GAGTC	5 cut(s)	1105, 1195, 1275, 1888, 2094
MmeI	TCCRAC	1 cut(s)	1943
MseI	TTAA	2 cut(s)	1271, 2021
MslI	CAYNNNNRTG	3 cut(s)	551, 1316, 1916
MspA1I	CMGCKG	2 cut(s)	520, 971
MspI	CCGG	3 cut(s)	346, 372, 475
MspR9I	CCNGG	7 cut(s)	305, 311, 335, 347, 373, 1752, 1959
MunI	CAATTG	1 cut(s)	1358
Mva1269I	GAATGC	3 cut(s)	816, 1677, 1859
MvaI	CCWGG	5 cut(s)	305, 311, 335, 1752, 1959
MvnI	CGCG	3 cut(s)	115, 319, 1608
MwoI	GCNNNNNNNGC	9 cut(s)	91, 804, 811, 893, 896, 902, 1052, 1746, 1982
NciI	CCSGG	2 cut(s)	347, 373
NdeII	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
NlaIV	GGNNCC	8 cut(s)	315, 332, 344, 841, 1120, 1193, 1493, 1557
NmuCI	GTSAC	5 cut(s)	463, 590, 727, 1291, 1891
NsbI	TGCGCA	1 cut(s)	1430
NspI	RCATGY	6 cut(s)	121, 250, 511, 909, 1331, 1744
OliI	CACNNNNGTG	1 cut(s)	1916
PaeI	GCATGC	2 cut(s)	121, 1331
PceI	AGGCCT	1 cut(s)	2050
PciI	ACATGT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 495
PctI	GAATGC	3 cut(s)	816, 1677, 1859
PfeI	GAWTC	3 cut(s)	40, 700, 924
PflFI	GACNNNGTC	1 cut(s)	1544
PflMI	CCANNNNNTGG	2 cut(s)	310, 1573
PfoI	TCCNGGA	2 cut(s)	309, 333
PleI	GAGTC	5 cut(s)	1104, 1195, 1275, 1888, 2094
PmaCI	CACGTG	1 cut(s)	499
PmlI	CACGTG	1 cut(s)	499
PpsI	GAGTC	5 cut(s)	1104, 1195, 1275, 1888, 2094
Ppu21I	YACGTR	3 cut(s)	499, 1086, 1891
PpuMI	RGGWCCY	1 cut(s)	307
PscI	ACATGT	1 cut(s)	507
PshAI	GACNNNNGTC	2 cut(s)	597, 2062
PsiI	TTATAA	1 cut(s)	2045
Psp124BI	GAGCTC	1 cut(s)	1776
Psp5II	RGGWCCY	1 cut(s)	307
Psp6I	CCWGG	5 cut(s)	303, 309, 333, 1750, 1957
PspCI	CACGTG	1 cut(s)	499
PspGI	CCWGG	5 cut(s)	303, 309, 333, 1750, 1957
PspN4I	GGNNCC	8 cut(s)	315, 332, 344, 841, 1120, 1193, 1493, 1557
PspPI	GGNCC	8 cut(s)	301, 307, 313, 889, 1192, 1504, 1748, 1797
PspPPI	RGGWCCY	1 cut(s)	307
PstI	CTGCAG	2 cut(s)	519, 901
PstNI	CAGNNNCTG	1 cut(s)	310
PsuI	RGATCY	2 cut(s)	330, 1657
PsyI	GACNNNGTC	1 cut(s)	1544
PvuII	CAGCTG	2 cut(s)	520, 971
RsaI	GTAC	6 cut(s)	539, 914, 1557, 1910, 1949, 2009
RsaNI	GTAC	6 cut(s)	538, 913, 1556, 1909, 1948, 2008
RseI	CAYNNNNRTG	3 cut(s)	551, 1316, 1916
SacI	GAGCTC	1 cut(s)	1776
SaqAI	TTAA	2 cut(s)	1271, 2021
Sau3AI	GATC	7 cut(s)	330, 722, 1485, 1579, 1603, 1657, 2137
Sau96I	GGNCC	8 cut(s)	301, 307, 313, 889, 1192, 1504, 1748, 1797
SchI	GAGTC	5 cut(s)	1105, 1195, 1275, 1888, 2094
ScrFI	CCNGG	7 cut(s)	305, 311, 335, 347, 373, 1752, 1959
SduI	GDGCHC	3 cut(s)	378, 474, 1776
SexAI	ACCWGGT	1 cut(s)	1957
SfaNI	GCATC	2 cut(s)	1702, 2023
SfcI	CTRYAG	3 cut(s)	87, 515, 897
SinI	GGWCC	2 cut(s)	307, 313
SmiMI	CAYNNNNRTG	3 cut(s)	551, 1316, 1916
SmlI	CTYRAG	2 cut(s)	1033, 1589
SmoI	CTYRAG	2 cut(s)	1033, 1589
SphI	GCATGC	2 cut(s)	121, 1331
Sse9I	AATT	8 cut(s)	56, 239, 411, 1263, 1358, 1641, 1836, 1986
SseBI	AGGCCT	1 cut(s)	2050
SsiI	CCGC	5 cut(s)	261, 277, 317, 887, 1159
SspI	AATATT	1 cut(s)	990
SstI	GAGCTC	1 cut(s)	1776
StuI	AGGCCT	1 cut(s)	2050
StyD4I	CCNGG	7 cut(s)	303, 309, 333, 345, 371, 1750, 1957
TaaI	ACNGT	7 cut(s)	224, 463, 469, 733, 745, 844, 1135
TaiI	ACGT	4 cut(s)	492, 501, 1088, 1893
TaqI	TCGA	5 cut(s)	1470, 1829, 1845, 2053, 2066
TaqII	GACCGA	1 cut(s)	301
TasI	AATT	8 cut(s)	56, 239, 411, 1263, 1358, 1641, 1836, 1986
TauI	GCSGC	3 cut(s)	279, 890, 1161
TfiI	GAWTC	3 cut(s)	40, 700, 924
Tru1I	TTAA	2 cut(s)	1271, 2021
Tru9I	TTAA	2 cut(s)	1271, 2021
TscAI	CASTG	6 cut(s)	229, 259, 750, 1282, 1768, 2085
TseFI	GTSAC	5 cut(s)	463, 590, 727, 1291, 1891
TseI	GCWGC	9 cut(s)	24, 514, 517, 586, 896, 968, 1454, 1704, 1976
Tsp45I	GTSAC	5 cut(s)	463, 590, 727, 1291, 1891
TspDTI	ATGAA	7 cut(s)	17, 751, 1488, 1792, 1938, 2022, 2064
TspGWI	ACGGA	3 cut(s)	500, 1250, 1868
TspRI	CASTG	6 cut(s)	229, 259, 750, 1282, 1768, 2085
Tth111I	GACNNNGTC	1 cut(s)	1544
Van91I	CCANNNNNTGG	2 cut(s)	310, 1573
VpaK11BI	GGWCC	2 cut(s)	307, 313
XagI	CCTNNNNNAGG	1 cut(s)	1499
XapI	RAATTY	2 cut(s)	56, 239
XceI	RCATGY	6 cut(s)	121, 250, 511, 909, 1331, 1744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1112
XmiI	GTMKAC	1 cut(s)	1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.