Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Forward (+)

30398278 .. 30403477

Gene Structure 5200 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033664

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGCCTATAGAGCAAGAGATTTCTCACTCGTCGCGCATGCACCACTACATGACACAAGACGACGATGACAGCTCTGAGGTAGAAGAGAGAGTATTTGAGGACTACGAAGACGACGACGAAGACGCAGAAGATGACGATGACAGTGGCAGAGGGAGTAAATTCTGCATGTTCACTGCTTGCGGTGGTGGTTCTGGCCGCAGAAGACCGAGTTGGTCTCTGGGCCAGGTCCTAGACCCACGAGCCAAGTGGATCCAGGAATGGAACCGGGTTTTCCTGCTGGTGTGCGCCACCGGGCTCGTGATAGACCCTCTGTTCTTCTACTCTCTGTCAATCAGCGAGAGATGTATGTGTCTGTTTGTGGACGGCTGGTTTGCCATAACGGTGACGGTGCTCCGGTGCATGACGGACGTGTTGCACGTGTGGAACATGTGGCTGCAGCTGAAGACGGCGAAGAGGTACTCCTTCACGGCGATGGTTGGTGGTGGTGAAGGGACAAACAATGAGCTGCGTGACACCAGTCCACGCTCTGTGGCGATGAGATATTTGAAGGGCAAGAAGGGGTTTTTGTTTGACCTCTTTGTTATTCTGCCTATCCCCCAGATAGTATTATGGGTAGTGATTCCTGCATTATTGGAGAAGGGATCGGTGACGGTGGTGATGACAGTGTTCTTGATGTTTTTCATTCAATATCTCCCGAAAATCTATCACTCAGTTTGCCTCTTGCGCCGAATGCAAAACCTATCTGGCTACATCTTTGGCACCGTTTGGTGGGGAATAGCCCTCAACTTGATTGCATATTTTGTTGCGGCCCATGCTGCAGGAGCATGTTGGTACTTGTTAGGAATCCAAAGGGCAGAGAAGTGCCTGAAAGAGCAATGCAGGGAAGCAGCTGGTTGTGGAATGAGAATATTATCTTGCAAAGACCCATTTTATTATGGAAAAGAAACCAGCTTGAGAGACAGAGCAAGAATAGCATGGGCAAACAACAAGCAAGCTAGGTCTACGTGCTTGGAGAGTCCAAATCATTACGACTATGGAGCCTTTGCATGGACTGTTCAACTTTTCACAAATGACAGCCGCTTGGAAAAGATACTTTTCCCTATCTTTTGGGGCCTAATGACTCTCAGCACCTTTGGGAACTTGGAAAGCTCAACGGAATGGTTAGAGGTTGTCTTCAACATAATTGTTTTAACCAGTGGACTCCTTTTGGTCACTATGTTGATAGGAAACATAAAGGTGTTTTTGCATGCAACCACTTCAAAGAAACAAGCAATGCAATTGAAGATGAGAAACATAGAGTGGTGGATGAGGAAGAGGCACTTGCCTATGGGGTTCAGGCAACGGGTGCGCAACTACGAGCGTCAACGATGGGCAGCCATGCGTGGTGTCGATGAATGTGAGATGATCAGGAACCTTCCCGAGGGCCTTAGAAGGGATATCAAGTATCACCTATGCTTGGACTTGGTCAGACAGGTACCATTATTCCAATATATGGATGATCTGGTTCTTGAGAACATTTGTGATCGCGTCAAGTCTCTTATATTCCCAAAAGGAGAAACAATAACAAGAGAGGGAGACCCAGTTCAAAGAATGCTATTTGTAGTAAGGGGGCATCTTCAAAGCAGCCAAGTTCTCAGAGATGGTGTGAAAAGTTGCTGCATGTTAGGCCCTGGAAACTTCAGTGGCGACGAGCTCTTGTCATGGTGTCTCAGAAGGCCCTTCATAGAAAGACTACCACCATCTTCCTCGACGCTAATTACTCTCGAAACCACAGAAGCATTCGGCCTTGAAGCAGAGGATGTCAAATACGTGACTCAACATTTTCGGTACACATTTGTGAATGAAAAGGTCAAGAGAAGTGCAAGGTACTACTCACCAGGTTGGAGGACATGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGGAGGTACAAGCATCGCTTAACGTTAACTTCATTGTCGTTTATAAGGCCTCGAAGACCCCTGTCTAGATGTTCATCACTGGGAGAGGACAGGCTGAGACTGTACACAGCTTTGTTGACTTCTCCAAAGCCAAATGATCAAGATGATTTTTTGATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

694

Amino Acids

80.27

Weight (kDa)

8.69

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	515 - 602	2e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1964
Acc16I	TGCGCA	1 cut(s)	1349
Acc65I	GGTACC	1 cut(s)	1474
AccB1I	GGYRCC	2 cut(s)	758, 1474
AccB7I	CCANNNNNTGG	1 cut(s)	1492
AccI	GTMKAC	1 cut(s)	1001
AccII	CGCG	2 cut(s)	34, 1527
AciI	CCGC	4 cut(s)	180, 196, 806, 1078
AclI	AACGTT	1 cut(s)	1943
AclWI	GGATC	3 cut(s)	244, 257, 649
AcoI	YGGCCR	1 cut(s)	193
AcsI	RAATTY	1 cut(s)	158
AcuI	CTGAAG	2 cut(s)	461, 1663
AcvI	CACGTG	1 cut(s)	418
AfaI	GTAC	7 cut(s)	458, 833, 1476, 1829, 1868, 1928, 2024
AfiI	CCNNNNNNNGG	6 cut(s)	768, 1047, 1420, 1432, 1456, 1492
AflIII	ACRYGT	3 cut(s)	408, 417, 426
AgsI	TTSAA	9 cut(s)	547, 686, 1058, 1177, 1260, 1282, 1586, 1619, 1790
AjiI	CACGTC	1 cut(s)	409
AjnI	CCWGG	4 cut(s)	222, 252, 1669, 1876
AjuI	GAANNNNNNNTTGG	2 cut(s)	193, 225
AleI	CACNNNNGTG	1 cut(s)	1835
AloI	GAACNNNNNNTCC	2 cut(s)	1566, 1598
AluBI	AGCT	9 cut(s)	72, 439, 505, 890, 951, 995, 1149, 1693, 2030
AluI	AGCT	9 cut(s)	72, 439, 505, 890, 951, 995, 1149, 1693, 2030
Alw21I	GWGCWC	2 cut(s)	393, 1695
Alw26I	GTCTC	6 cut(s)	219, 951, 1539, 1569, 1712, 2011
AlwI	GGATC	3 cut(s)	244, 257, 649
Ama87I	CYCGRG	1 cut(s)	1418
AoxI	GGCC	9 cut(s)	193, 220, 807, 1111, 1423, 1666, 1715, 1783, 1967
ApeKI	GCWGC	9 cut(s)	433, 436, 505, 815, 887, 1373, 1623, 1656, 1895
ApoI	RAATTY	1 cut(s)	158
ArsI	GACNNNNNNTTYG	2 cut(s)	353, 385
Asp718I	GGTACC	1 cut(s)	1474
AspLEI	GCGC	4 cut(s)	36, 287, 726, 1350
AspS9I	GGNCC	7 cut(s)	220, 226, 808, 1111, 1423, 1667, 1716
AsuC2I	CCSGG	2 cut(s)	266, 292
AsuHPI	GGTGA	6 cut(s)	394, 497, 658, 667, 1439, 1866
AvaI	CYCGRG	1 cut(s)	1418
AvaII	GGWCC	1 cut(s)	226
BamHI	GGATCC	1 cut(s)	249
BanI	GGYRCC	2 cut(s)	758, 1474
BanII	GRGCYC	2 cut(s)	297, 1695
BauI	CACGAG	2 cut(s)	237, 296
BbrPI	CACGTG	1 cut(s)	418
BbsI	GAAGAC	6 cut(s)	114, 126, 208, 449, 1165, 1981
Bbv12I	GWGCWC	2 cut(s)	393, 1695
BbvI	GCAGC	9 cut(s)	420, 448, 492, 802, 899, 1385, 1635, 1643, 1882
BccI	CCATC	4 cut(s)	466, 1362, 1634, 1747
BceAI	ACGGC	3 cut(s)	379, 462, 483
BciT130I	CCWGG	4 cut(s)	224, 254, 1671, 1878
BclI	TGATCA	2 cut(s)	1404, 2056
BcnI	CCSGG	2 cut(s)	266, 292
BcoDI	GTCTC	6 cut(s)	219, 951, 1539, 1569, 1712, 2011
BfaI	CTAG	3 cut(s)	230, 996, 1986
BfmI	CTRYAG	3 cut(s)	6, 434, 816
Bme1390I	CCNGG	6 cut(s)	224, 254, 266, 292, 1671, 1878
Bme18I	GGWCC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	1418
BmgBI	CACGTC	1 cut(s)	409
BmgT120I	GGNCC	7 cut(s)	220, 226, 808, 1111, 1423, 1667, 1716
BmiI	GGNNCC	7 cut(s)	251, 263, 760, 1039, 1112, 1412, 1476
BmrFI	CCNGG	6 cut(s)	224, 254, 266, 292, 1671, 1878
BmrI	ACTGGG	2 cut(s)	1574, 2009
BmsI	GCATC	2 cut(s)	1621, 1942
BmuI	ACTGGG	2 cut(s)	1574, 2009
BoxI	GACNNNNGTC	2 cut(s)	516, 1981
BpiI	GAAGAC	6 cut(s)	114, 126, 208, 449, 1165, 1981
BplI	GAGNNNNNCTC	2 cut(s)	199, 231
BpuEI	CTTGAG	2 cut(s)	973, 1529
BpuMI	CCSGG	2 cut(s)	266, 292
BsaAI	YACGTR	3 cut(s)	418, 1005, 1810
BsaBI	GATNNNNATC	1 cut(s)	1993
BsaI	GGTCTC	2 cut(s)	219, 1569
BsaJI	CCNNGG	2 cut(s)	1419, 1669
BsaWI	WCCGGW	1 cut(s)	393
BsaXI	ACNNNNNCTCC	2 cut(s)	1566, 1596
Bsc4I	CCNNNNNNNGG	6 cut(s)	768, 1047, 1420, 1432, 1456, 1492
Bse1I	ACTGG	4 cut(s)	516, 1194, 1580, 2004
Bse3DI	GCAATG	2 cut(s)	881, 1278
Bse8I	GATNNNNATC	1 cut(s)	1993
BseBI	CCWGG	4 cut(s)	224, 254, 1671, 1878
BseDI	CCNNGG	2 cut(s)	1419, 1669
BseGI	GGATG	3 cut(s)	1311, 1501, 1804
BseJI	GATNNNNATC	1 cut(s)	1993
BseLI	CCNNNNNNNGG	6 cut(s)	768, 1047, 1420, 1432, 1456, 1492
BseMI	GCAATG	2 cut(s)	881, 1278
BseMII	CTCAG	6 cut(s)	66, 723, 1138, 1648, 1723, 2006
BseNI	ACTGG	4 cut(s)	516, 1194, 1580, 2004
BseRI	GAGGAG	1 cut(s)	1936
BseXI	GCAGC	9 cut(s)	420, 448, 492, 802, 899, 1385, 1635, 1643, 1882
Bsh1236I	CGCG	2 cut(s)	34, 1527
BshFI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1668, 1717, 1785, 1969
BshNI	GGYRCC	2 cut(s)	758, 1474
BsiHKAI	GWGCWC	2 cut(s)	393, 1695
BsiHKCI	CYCGRG	1 cut(s)	1418
BsiSI	CCGG	3 cut(s)	265, 291, 394
BslFI	GGGAC	1 cut(s)	505
BslI	CCNNNNNNNGG	6 cut(s)	768, 1047, 1420, 1432, 1456, 1492
BsmAI	GTCTC	6 cut(s)	219, 951, 1539, 1569, 1712, 2011
BsmFI	GGGAC	1 cut(s)	505
BsmI	GAATGC	3 cut(s)	735, 1596, 1778
BsnI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1668, 1717, 1785, 1969
Bso31I	GGTCTC	2 cut(s)	219, 1569
BsoBI	CYCGRG	1 cut(s)	1418
Bsp1286I	GDGCHC	3 cut(s)	297, 393, 1695
Bsp1407I	TGTACA	1 cut(s)	2022
Bsp143I	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
BspACI	CCGC	4 cut(s)	180, 196, 806, 1078
BspANI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1668, 1717, 1785, 1969
BspCNI	CTCAG	6 cut(s)	67, 722, 1137, 1647, 1722, 2007
BspFNI	CGCG	2 cut(s)	34, 1527
BspLI	GGNNCC	7 cut(s)	251, 263, 760, 1039, 1112, 1412, 1476
BspMAI	CTGCAG	2 cut(s)	438, 820
BspPI	GGATC	3 cut(s)	244, 257, 649
BspT107I	GGYRCC	2 cut(s)	758, 1474
BspTNI	GGTCTC	2 cut(s)	219, 1569
BsrDI	GCAATG	2 cut(s)	881, 1278
BsrGI	TGTACA	1 cut(s)	2022
BsrI	ACTGG	4 cut(s)	516, 1194, 1580, 2004
BssECI	CCNNGG	2 cut(s)	1419, 1669
BssMI	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
BssSI	CACGAG	2 cut(s)	237, 296
Bst2BI	CACGAG	2 cut(s)	237, 296
Bst2UI	CCWGG	4 cut(s)	224, 254, 1671, 1878
Bst4CI	ACNGT	8 cut(s)	143, 382, 388, 652, 664, 763, 1054, 2022
Bst6I	CTCTTC	3 cut(s)	78, 446, 1307
BstAPI	GCANNNNNTGC	1 cut(s)	1345
BstAUI	TGTACA	1 cut(s)	2022
BstBAI	YACGTR	3 cut(s)	418, 1005, 1810
BstC8I	GCNNGC	4 cut(s)	38, 178, 993, 1248
BstDEI	CTNAG	7 cut(s)	75, 709, 1124, 1427, 1634, 1709, 2015
BstENI	CCTNNNNNAGG	1 cut(s)	1418
BstF5I	GGATG	3 cut(s)	1311, 1501, 1804
BstFNI	CGCG	2 cut(s)	34, 1527
BstHHI	GCGC	4 cut(s)	36, 287, 726, 1350
BstKTI	GATC	6 cut(s)	252, 644, 1407, 1501, 1525, 2059
BstMAI	GTCTC	6 cut(s)	219, 951, 1539, 1569, 1712, 2011
BstMBI	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
BstNI	CCWGG	4 cut(s)	224, 254, 1671, 1878
BstNSI	RCATGY	6 cut(s)	40, 169, 430, 828, 1250, 1663
BstPAI	GACNNNNGTC	2 cut(s)	516, 1981
BstSCI	CCNGG	6 cut(s)	222, 252, 264, 290, 1669, 1876
BstSFI	CTRYAG	3 cut(s)	6, 434, 816
BstUI	CGCG	2 cut(s)	34, 1527
BstV1I	GCAGC	9 cut(s)	420, 448, 492, 802, 899, 1385, 1635, 1643, 1882
BstV2I	GAAGAC	6 cut(s)	114, 126, 208, 449, 1165, 1981
BstX2I	RGATCY	1 cut(s)	249
BstYI	RGATCY	1 cut(s)	249
BsuRI	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1668, 1717, 1785, 1969
BtgZI	GCGATG	3 cut(s)	485, 548, 1919
BtrI	CACGTC	1 cut(s)	409
BtsCI	GGATG	3 cut(s)	1311, 1501, 1804
BtsI	GCAGTG	1 cut(s)	171
BtsIMutI	CAGTG	6 cut(s)	148, 171, 669, 1201, 1687, 1997
Cac8I	GCNNGC	4 cut(s)	38, 178, 993, 1248
CfoI	GCGC	4 cut(s)	36, 287, 726, 1350
Cfr13I	GGNCC	7 cut(s)	220, 226, 808, 1111, 1423, 1667, 1716
CseI	GACGC	4 cut(s)	131, 1349, 1516, 1759
CsiI	ACCWGGT	1 cut(s)	1876
Csp6I	GTAC	7 cut(s)	457, 832, 1475, 1828, 1867, 1927, 2023
CviQI	GTAC	7 cut(s)	457, 832, 1475, 1828, 1867, 1927, 2023
DdeI	CTNAG	7 cut(s)	75, 709, 1124, 1427, 1634, 1709, 2015
DpnI	GATC	6 cut(s)	251, 643, 1406, 1500, 1524, 2058
DpnII	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
EaeI	YGGCCR	1 cut(s)	193
Eam1104I	CTCTTC	3 cut(s)	78, 446, 1307
EarI	CTCTTC	3 cut(s)	78, 446, 1307
Ecl136II	GAGCTC	1 cut(s)	1693
Eco147I	AGGCCT	1 cut(s)	1969
Eco24I	GRGCYC	2 cut(s)	297, 1695
Eco31I	GGTCTC	2 cut(s)	219, 1569
Eco32I	GATATC	1 cut(s)	1438
Eco47I	GGWCC	1 cut(s)	226
Eco53kI	GAGCTC	1 cut(s)	1693
Eco57I	CTGAAG	2 cut(s)	461, 1663
Eco72I	CACGTG	1 cut(s)	418
Eco88I	CYCGRG	1 cut(s)	1418
EcoICRI	GAGCTC	1 cut(s)	1693
EcoNI	CCTNNNNNAGG	1 cut(s)	1418
EcoO109I	RGGNCCY	5 cut(s)	226, 1111, 1423, 1667, 1716
EcoRII	CCWGG	4 cut(s)	222, 252, 1669, 1876
EcoRV	GATATC	1 cut(s)	1438
EcoT38I	GRGCYC	2 cut(s)	297, 1695
FalI	AAGNNNNNCTT	4 cut(s)	1304, 1336, 1922, 1954
FaqI	GGGAC	1 cut(s)	505
FbaI	TGATCA	2 cut(s)	1404, 2056
FblI	GTMKAC	1 cut(s)	1001
FokI	GGATG	3 cut(s)	1318, 1508, 1811
FriOI	GRGCYC	2 cut(s)	297, 1695
FspBI	CTAG	3 cut(s)	230, 996, 1986
FspI	TGCGCA	1 cut(s)	1349
GlaI	GCGC	4 cut(s)	35, 286, 725, 1349
HaeIII	GGCC	9 cut(s)	195, 222, 809, 1113, 1425, 1668, 1717, 1785, 1969
HapII	CCGG	3 cut(s)	265, 291, 394
HgaI	GACGC	4 cut(s)	131, 1349, 1516, 1759
HhaI	GCGC	4 cut(s)	36, 287, 726, 1350
Hin6I	GCGC	4 cut(s)	34, 285, 724, 1348
HinP1I	GCGC	4 cut(s)	34, 285, 724, 1348
HincII	GTYRAC	3 cut(s)	1364, 1947, 2037
HindII	GTYRAC	3 cut(s)	1364, 1947, 2037
HinfI	GANTC	6 cut(s)	619, 843, 1015, 1120, 1200, 1813
HpaI	GTTAAC	1 cut(s)	1947
HpaII	CCGG	3 cut(s)	265, 291, 394
HphI	GGTGA	6 cut(s)	394, 497, 658, 667, 1439, 1866
Hpy188I	TCNGA	4 cut(s)	76, 1469, 1637, 1712
Hpy99I	CGWCG	6 cut(s)	34, 65, 116, 119, 1691, 1753
HpyAV	CCTTC	9 cut(s)	472, 482, 541, 550, 631, 1424, 1425, 1707, 1729
HpyCH4III	ACNGT	8 cut(s)	143, 382, 388, 652, 664, 763, 1054, 2022
HpyCH4IV	ACGT	5 cut(s)	408, 417, 1004, 1809, 1943
HpyF3I	CTNAG	7 cut(s)	75, 709, 1124, 1427, 1634, 1709, 2015
HpySE526I	ACGT	5 cut(s)	408, 417, 1004, 1809, 1943
HspAI	GCGC	4 cut(s)	34, 285, 724, 1348
KpnI	GGTACC	1 cut(s)	1478
Ksp22I	TGATCA	2 cut(s)	1404, 2056
KspAI	GTTAAC	1 cut(s)	1947
Kzo9I	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
LmnI	GCTCC	3 cut(s)	396, 821, 1037
Lsp1109I	GCAGC	9 cut(s)	420, 448, 492, 802, 899, 1385, 1635, 1643, 1882
LweI	GCATC	2 cut(s)	1621, 1942
MabI	ACCWGGT	1 cut(s)	1876
MaeI	CTAG	3 cut(s)	230, 996, 1986
MaeII	ACGT	5 cut(s)	408, 417, 1004, 1809, 1943
MaeIII	GTNAC	5 cut(s)	382, 509, 646, 1210, 1810
MalI	GATC	6 cut(s)	251, 643, 1406, 1500, 1524, 2058
MboI	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
MfeI	CAATTG	1 cut(s)	1277
MflI	RGATCY	1 cut(s)	249
MhlI	GDGCHC	3 cut(s)	297, 393, 1695
MluCI	AATT	5 cut(s)	158, 1182, 1277, 1755, 1905
MlyI	GAGTC	4 cut(s)	1024, 1114, 1194, 1807
MmeI	TCCRAC	1 cut(s)	1862
MseI	TTAA	3 cut(s)	1190, 1940, 1946
MslI	CAYNNNNRTG	4 cut(s)	380, 470, 1235, 1835
MspA1I	CMGCKG	2 cut(s)	439, 890
MspI	CCGG	3 cut(s)	265, 291, 394
MspR9I	CCNGG	6 cut(s)	224, 254, 266, 292, 1671, 1878
MunI	CAATTG	1 cut(s)	1277
Mva1269I	GAATGC	3 cut(s)	735, 1596, 1778
MvaI	CCWGG	4 cut(s)	224, 254, 1671, 1878
MvnI	CGCG	2 cut(s)	34, 1527
NciI	CCSGG	2 cut(s)	266, 292
NdeII	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
NlaIV	GGNNCC	7 cut(s)	251, 263, 760, 1039, 1112, 1412, 1476
NmuCI	GTSAC	5 cut(s)	382, 509, 646, 1210, 1810
NsbI	TGCGCA	1 cut(s)	1349
NspI	RCATGY	6 cut(s)	40, 169, 430, 828, 1250, 1663
OliI	CACNNNNGTG	1 cut(s)	1835
PaeI	GCATGC	2 cut(s)	40, 1250
PceI	AGGCCT	1 cut(s)	1969
PciI	ACATGT	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 414
PctI	GAATGC	3 cut(s)	735, 1596, 1778
PfeI	GAWTC	2 cut(s)	619, 843
PflFI	GACNNNGTC	1 cut(s)	1463
PflMI	CCANNNNNTGG	1 cut(s)	1492
PfoI	TCCNGGA	1 cut(s)	252
PleI	GAGTC	4 cut(s)	1023, 1114, 1194, 1807
PmaCI	CACGTG	1 cut(s)	418
PmlI	CACGTG	1 cut(s)	418
PpsI	GAGTC	4 cut(s)	1023, 1114, 1194, 1807
Ppu21I	YACGTR	3 cut(s)	418, 1005, 1810
PpuMI	RGGWCCY	1 cut(s)	226
PscI	ACATGT	1 cut(s)	426
PshAI	GACNNNNGTC	2 cut(s)	516, 1981
PsiI	TTATAA	1 cut(s)	1964
Psp124BI	GAGCTC	1 cut(s)	1695
Psp1406I	AACGTT	1 cut(s)	1943
Psp5II	RGGWCCY	1 cut(s)	226
Psp6I	CCWGG	4 cut(s)	222, 252, 1669, 1876
PspCI	CACGTG	1 cut(s)	418
PspGI	CCWGG	4 cut(s)	222, 252, 1669, 1876
PspN4I	GGNNCC	7 cut(s)	251, 263, 760, 1039, 1112, 1412, 1476
PspPI	GGNCC	7 cut(s)	220, 226, 808, 1111, 1423, 1667, 1716
PspPPI	RGGWCCY	1 cut(s)	226
PstI	CTGCAG	2 cut(s)	438, 820
PsuI	RGATCY	1 cut(s)	249
PsyI	GACNNNGTC	1 cut(s)	1463
PvuII	CAGCTG	2 cut(s)	439, 890
RsaI	GTAC	7 cut(s)	458, 833, 1476, 1829, 1868, 1928, 2024
RsaNI	GTAC	7 cut(s)	457, 832, 1475, 1828, 1867, 1927, 2023
RseI	CAYNNNNRTG	4 cut(s)	380, 470, 1235, 1835
SacI	GAGCTC	1 cut(s)	1695
SaqAI	TTAA	3 cut(s)	1190, 1940, 1946
Sau3AI	GATC	6 cut(s)	249, 641, 1404, 1498, 1522, 2056
Sau96I	GGNCC	7 cut(s)	220, 226, 808, 1111, 1423, 1667, 1716
SchI	GAGTC	4 cut(s)	1024, 1114, 1194, 1807
ScrFI	CCNGG	6 cut(s)	224, 254, 266, 292, 1671, 1878
SduI	GDGCHC	3 cut(s)	297, 393, 1695
SexAI	ACCWGGT	1 cut(s)	1876
SfaNI	GCATC	2 cut(s)	1621, 1942
SfcI	CTRYAG	3 cut(s)	6, 434, 816
SinI	GGWCC	1 cut(s)	226
SmiMI	CAYNNNNRTG	4 cut(s)	380, 470, 1235, 1835
SmlI	CTYRAG	2 cut(s)	952, 1508
SmoI	CTYRAG	2 cut(s)	952, 1508
SphI	GCATGC	2 cut(s)	40, 1250
Sse9I	AATT	5 cut(s)	158, 1182, 1277, 1755, 1905
SseBI	AGGCCT	1 cut(s)	1969
SsiI	CCGC	4 cut(s)	180, 196, 806, 1078
SspI	AATATT	1 cut(s)	909
SspMI	CTAG	3 cut(s)	230, 996, 1986
SstI	GAGCTC	1 cut(s)	1695
StuI	AGGCCT	1 cut(s)	1969
StyD4I	CCNGG	6 cut(s)	222, 252, 264, 290, 1669, 1876
TaaI	ACNGT	8 cut(s)	143, 382, 388, 652, 664, 763, 1054, 2022
TaiI	ACGT	5 cut(s)	411, 420, 1007, 1812, 1946
TaqI	TCGA	4 cut(s)	1389, 1748, 1764, 1972
TaqII	GACCGA	1 cut(s)	220
TasI	AATT	5 cut(s)	158, 1182, 1277, 1755, 1905
TatI	WGTACW	1 cut(s)	2022
TauI	GCSGC	3 cut(s)	198, 809, 1080
TfiI	GAWTC	2 cut(s)	619, 843
Tru1I	TTAA	3 cut(s)	1190, 1940, 1946
Tru9I	TTAA	3 cut(s)	1190, 1940, 1946
TscAI	CASTG	6 cut(s)	148, 178, 669, 1201, 1687, 2004
TseFI	GTSAC	5 cut(s)	382, 509, 646, 1210, 1810
TseI	GCWGC	9 cut(s)	433, 436, 505, 815, 887, 1373, 1623, 1656, 1895
Tsp45I	GTSAC	5 cut(s)	382, 509, 646, 1210, 1810
TspDTI	ATGAA	6 cut(s)	670, 1407, 1711, 1857, 1941, 1983
TspGWI	ACGGA	2 cut(s)	419, 1169
TspRI	CASTG	6 cut(s)	148, 178, 669, 1201, 1687, 2004
Tth111I	GACNNNGTC	1 cut(s)	1463
Van91I	CCANNNNNTGG	1 cut(s)	1492
VpaK11BI	GGWCC	1 cut(s)	226
XagI	CCTNNNNNAGG	1 cut(s)	1418
XapI	RAATTY	1 cut(s)	158
XbaI	TCTAGA	1 cut(s)	1985
XceI	RCATGY	6 cut(s)	40, 169, 430, 828, 1250, 1663
XcmI	CCANNNNNNNNNTGG	1 cut(s)	243
XmiI	GTMKAC	1 cut(s)	1001
XspI	CTAG	3 cut(s)	230, 996, 1986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.