Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Reverse (-)

34297449 .. 34304565

Gene Structure 7117 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1235800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGCCTGGTGAGCACGAAATTTCTCAGACTTCTTCACGCATGCAACACTATATCTCCGACGAAGAATCGGAATCCGAAGATCACGAAGACCACGAGGTACGAGAAGACGACGAAGAAAGTGATGGAAGCAGTACATCTCATGGAGGAAATTTTGAGAACAACTGCTTGTACAACATGTGTTCGTTGCAGCGTCGGAGGAGGCCCGGTTGGTCGCTAGGCCAAGTTCTCGACCCGAGGGCAAAATGGATTCAAGAATGGAACAGGATTTTCCTCCTTGTGTGTGCATCGGGGCTCATCATAGACCCTCTCTTCTTCTATGCCTTGTCCATTAGCCAGAGCTGTATGTGTCTGTTTGTGGACGGGTGGCTTGCCATCACGGTGACCGTGCTCCGCTGCATGACGGACGTTCTGCACGTGTGGAACATGTGGTTGCAGCTGAAGATGGCCAAGCGCTACTCCTTCACTGCAATGGTTGGGGGGGATGGTGGAGGAGCCACTGGGCTGCGCGACACTAGTCCAAGGTCTGTAGCTCTCAAGTACTTGAAGTCAAAGAAGGGGTTTTTGTTTGACCTCTTTGTTATTCTCCCCATACCCCAGATAATATTATGGGTGGTAATTCCTTCACTATTGGAGAGAGGATCGGTGACCGTAGTGATGACAGTGTTCTTGATGTTTTTCTTCCAATATCTCCCAAAGATCTATCACTCTGTCTGCCTCCTGCGTCGGATGCAAAATCTCTCTGGCTACATTTTTGGAACTGTTTGGTGGGGGATAGCCCTCAACTTGATTGCATATTTTGTCGCTGCCCATGCTGCAGGAGCATGTTGGTACTTGTTAGGAATTCAACGGGCAGAGAAATGCTTGAAAGAGCAATGCAGAGAATCAAGTGGATGCGGCCTCAGAATACTAGCTTGCAAAGACCCTATTTACTACGGAGCAACAAACACTCTCAGAGACACTGCGAGACTTGCCTGGGCGGAGAACAGAAAAGCACGGTCGACGTGCTTAGACAATGCCGATCATTACGATTATGGAGCTTATTCATGGACTGTTCAGCTTGTTACAAACGATAGCCGATTGGAAAAAATACTTTTTCCCATCTTTTGGGGCCTAATGACTCTCAGCACCTTCGGAAACTTGGAAAGCTCAACTGAGTGGTTGGAGGTTGTTTTCAACATCATTGTTCTAACTAGTGGGCTGCTTTTGGTCACCATGTTGATAGGAAACATAAAGGTGTTTTTGCATGCGACAACATCTAAGAAACAAGCAATGCAATTGAAGATGAGAAACATAGAGTGGTGGATGAGGAAGAGGCATTTACCTCAGGGGTTTAGACAGCGAGTGCGAAACTACGAGCGCCAGAGATGGGCCGCCATGCGTGGCGTAGATGAATGTGAGATGATCAGAAACCTCCCTGAGGGCCTCAGGAGGGACATCAAGTATCATCTATGCTTGGACTTAGTAAGACAAGTGCCATTGTTCCAACATATGGATGATCTGGTTCTTGAGAATATTTGTGACCGTGTGAAGTCTCTTATATTCCCAAAAGGAGAAACAATAACTAGAGAAGGAGATCCAGTTCAAAGAATGCTGTTTGTAGTAAGGGGTCACCTTCAAAGCAGTCAAGTGCTCAGAGATGGTGTGAAAAGTTGCTGCATGTTAGGCCCTGGCAACTTCAGCGGCGATGAGCTTTTGTCATGGTGTCTCAGAAGGCCCTTTATAGAAAGACTACCACCATCTTCCTCCACATTAGTCACTCTTGAAACCACAGAGGCATTTAGCCTTGAAGCTGAGGATGTCAAATACGTGACTCAACATTTTCGGTACACATTTGTGAACGAAAAGGTTAAGAGAAGTGCAAGGTACTACTCACCCGGTTGGAGGACTTGGGCTGCTGTGGCAATTCAGTTGGCTTGGAGGAGGTACAAGCACCGGTTAACGCTGACTTCGTTGTCGTTTATAAGGCCTAGGAGACCTCTATCAAGGTGTTCTTCACTGGGAGAGGACAGGCTCAGATTGTATACGGCCCTGTTGACGTCTCCAAAGCCAAATGATCAAGATGACTTTTTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

692

Amino Acids

79.85

Weight (kDa)

8.82

Isoelectric Point (pI)

52.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	514 - 602	4.2e-08	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1961
AasI	GACNNNNNNGTC	1 cut(s)	1951
AatII	GACGTC	1 cut(s)	2039
AccB7I	CCANNNNNTGG	2 cut(s)	1104, 1489
AccI	GTMKAC	2 cut(s)	998, 2021
AccII	CGCG	1 cut(s)	507
AciI	CCGC	5 cut(s)	391, 894, 977, 1371, 1680
AclWI	GGATC	2 cut(s)	646, 1568
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	3 cut(s)	18, 148, 840
AcuI	CTGAAG	2 cut(s)	458, 1660
AcvI	CACGTG	1 cut(s)	415
AcyI	GRCGYC	1 cut(s)	2036
AfaI	GTAC	8 cut(s)	99, 133, 170, 539, 830, 1826, 1865, 1925
AfeI	AGCGCT	1 cut(s)	452
AfiI	CCNNNNNNNGG	6 cut(s)	1104, 1366, 1417, 1429, 1489, 1881
AflIII	ACRYGT	3 cut(s)	174, 414, 423
AgeI	ACCGGT	1 cut(s)	1932
AhlI	ACTAGT	2 cut(s)	512, 1190
AjiI	CACGTC	1 cut(s)	1002
AjnI	CCWGG	3 cut(s)	4, 971, 1666
AleI	CACNNNNGTG	1 cut(s)	1832
AloI	GAACNNNNNNTCC	2 cut(s)	1563, 1595
AluBI	AGCT	9 cut(s)	339, 436, 530, 911, 1037, 1057, 1146, 1690, 1790
AluI	AGCT	9 cut(s)	339, 436, 530, 911, 1037, 1057, 1146, 1690, 1790
Alw21I	GWGCWC	3 cut(s)	15, 390, 1632
Alw26I	GTCTC	6 cut(s)	948, 958, 1536, 1709, 1966, 2043
AlwI	GGATC	2 cut(s)	646, 1568
Ama87I	CYCGRG	1 cut(s)	232
Aor51HI	AGCGCT	1 cut(s)	452
ApeKI	GCWGC	9 cut(s)	187, 393, 433, 502, 803, 812, 1198, 1653, 1892
ApoI	RAATTY	3 cut(s)	18, 148, 840
AsiGI	ACCGGT	1 cut(s)	1932
AspA2I	CCTAGG	1 cut(s)	1967
AspLEI	GCGC	3 cut(s)	453, 507, 1359
AspS9I	GGNCC	7 cut(s)	201, 1108, 1368, 1420, 1664, 1713, 2026
AsuC2I	CCSGG	2 cut(s)	204, 1875
AsuHPI	GGTGA	6 cut(s)	20, 391, 655, 1201, 1601, 1863
AvaI	CYCGRG	1 cut(s)	232
AvrII	CCTAGG	1 cut(s)	1967
AxyI	CCTNAGG	3 cut(s)	1323, 1416, 1424
BalI	TGGCCA	1 cut(s)	446
BanII	GRGCYC	1 cut(s)	294
BauI	CACGAG	1 cut(s)	92
BbrPI	CACGTG	1 cut(s)	415
BbsI	GAAGAC	2 cut(s)	93, 111
Bbv12I	GWGCWC	3 cut(s)	15, 390, 1632
BbvCI	CCTCAGC	1 cut(s)	1791
BbvI	GCAGC	9 cut(s)	199, 380, 445, 489, 790, 799, 1185, 1640, 1879
BccI	CCATC	8 cut(s)	116, 380, 436, 476, 1106, 1359, 1631, 1744
BceAI	ACGGC	1 cut(s)	2040
BciT130I	CCWGG	3 cut(s)	6, 973, 1668
BclI	TGATCA	2 cut(s)	1401, 2053
BcnI	CCSGG	2 cut(s)	204, 1875
BcoDI	GTCTC	6 cut(s)	948, 958, 1536, 1709, 1966, 2043
BcuI	ACTAGT	2 cut(s)	512, 1190
BfaI	CTAG	6 cut(s)	215, 513, 908, 1191, 1563, 1968
BfmI	CTRYAG	2 cut(s)	525, 813
BfoI	RGCGCY	2 cut(s)	454, 1360
BglII	AGATCT	1 cut(s)	696
BlnI	CCTAGG	1 cut(s)	1967
BmcAI	AGTACT	1 cut(s)	539
Bme1390I	CCNGG	5 cut(s)	6, 204, 973, 1668, 1875
BmeT110I	CYCGRG	1 cut(s)	232
BmgBI	CACGTC	1 cut(s)	1002
BmgT120I	GGNCC	7 cut(s)	201, 1108, 1368, 1420, 1664, 1713, 2026
BmiI	GGNNCC	2 cut(s)	493, 1109
BmrFI	CCNGG	5 cut(s)	6, 204, 973, 1668, 1875
BmrI	ACTGGG	2 cut(s)	507, 2006
BmsI	GCATC	3 cut(s)	293, 717, 881
BmuI	ACTGGG	2 cut(s)	507, 2006
BoxI	GACNNNNGTC	1 cut(s)	513
BpiI	GAAGAC	2 cut(s)	93, 111
Bpu10I	CCTNAGC	1 cut(s)	1791
BpuEI	CTTGAG	2 cut(s)	518, 1526
BpuMI	CCSGG	2 cut(s)	204, 1875
BsaAI	YACGTR	2 cut(s)	415, 1807
BsaHI	GRCGYC	1 cut(s)	2036
BsaI	GGTCTC	1 cut(s)	1966
BsaJI	CCNNGG	5 cut(s)	233, 518, 972, 1666, 1967
BsaWI	WCCGGW	1 cut(s)	1932
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 190, 220, 1563, 1593
Bsc4I	CCNNNNNNNGG	6 cut(s)	1104, 1366, 1417, 1429, 1489, 1881
Bse118I	RCCGGY	1 cut(s)	1932
Bse1I	ACTGG	3 cut(s)	502, 1577, 2001
Bse21I	CCTNAGG	3 cut(s)	1323, 1416, 1424
Bse3DI	GCAATG	3 cut(s)	474, 878, 1275
BseBI	CCWGG	3 cut(s)	6, 973, 1668
BseDI	CCNNGG	5 cut(s)	233, 518, 972, 1666, 1967
BseGI	GGATG	6 cut(s)	487, 732, 896, 1308, 1498, 1801
BseLI	CCNNNNNNNGG	6 cut(s)	1104, 1366, 1417, 1429, 1489, 1881
BseMI	GCAATG	3 cut(s)	474, 878, 1275
BseNI	ACTGG	3 cut(s)	502, 1577, 2001
BseRI	GAGGAG	3 cut(s)	211, 504, 1933
BseXI	GCAGC	9 cut(s)	199, 380, 445, 489, 790, 799, 1185, 1640, 1879
BsgI	GTGCAG	1 cut(s)	395
Bsh1236I	CGCG	1 cut(s)	507
Bsh1285I	CGRYCG	1 cut(s)	998
BshTI	ACCGGT	1 cut(s)	1932
BsiEI	CGRYCG	1 cut(s)	998
BsiHKAI	GWGCWC	3 cut(s)	15, 390, 1632
BsiHKCI	CYCGRG	1 cut(s)	232
BsiSI	CCGG	3 cut(s)	204, 1875, 1933
BslFI	GGGAC	1 cut(s)	1445
BslI	CCNNNNNNNGG	6 cut(s)	1104, 1366, 1417, 1429, 1489, 1881
BsmAI	GTCTC	6 cut(s)	948, 958, 1536, 1709, 1966, 2043
BsmBI	CGTCTC	1 cut(s)	2043
BsmFI	GGGAC	1 cut(s)	1445
BsmI	GAATGC	1 cut(s)	1593
Bso31I	GGTCTC	1 cut(s)	1966
BsoBI	CYCGRG	1 cut(s)	232
Bsp1286I	GDGCHC	4 cut(s)	15, 294, 390, 1632
Bsp1407I	TGTACA	1 cut(s)	168
Bsp143I	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
BspACI	CCGC	5 cut(s)	391, 894, 977, 1371, 1680
BspFNI	CGCG	1 cut(s)	507
BspLI	GGNNCC	2 cut(s)	493, 1109
BspMAI	CTGCAG	1 cut(s)	817
BspPI	GGATC	2 cut(s)	646, 1568
BspTNI	GGTCTC	1 cut(s)	1966
BsrDI	GCAATG	3 cut(s)	474, 878, 1275
BsrFI	RCCGGY	1 cut(s)	1932
BsrGI	TGTACA	1 cut(s)	168
BsrI	ACTGG	3 cut(s)	502, 1577, 2001
BssAI	RCCGGY	1 cut(s)	1932
BssECI	CCNNGG	5 cut(s)	233, 518, 972, 1666, 1967
BssMI	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
BssNAI	GTATAC	1 cut(s)	2022
BssNI	GRCGYC	1 cut(s)	2036
BssSI	CACGAG	1 cut(s)	92
BssT1I	CCWWGG	2 cut(s)	518, 1967
Bst1107I	GTATAC	1 cut(s)	2022
Bst2BI	CACGAG	1 cut(s)	92
Bst2UI	CCWGG	3 cut(s)	6, 973, 1668
Bst4CI	ACNGT	8 cut(s)	379, 385, 649, 661, 760, 996, 1051, 1523
Bst6I	CTCTTC	2 cut(s)	314, 1304
BstACI	GRCGYC	1 cut(s)	2036
BstAUI	TGTACA	1 cut(s)	168
BstBAI	YACGTR	2 cut(s)	415, 1807
BstC8I	GCNNGC	4 cut(s)	41, 369, 913, 1245
BstEII	GGTNACC	4 cut(s)	379, 643, 1207, 1607
BstENI	CCTNNNNNAGG	1 cut(s)	1415
BstF5I	GGATG	6 cut(s)	487, 732, 896, 1308, 1498, 1801
BstFNI	CGCG	1 cut(s)	507
BstH2I	RGCGCY	2 cut(s)	454, 1360
BstHHI	GCGC	3 cut(s)	453, 507, 1359
BstKTI	GATC	8 cut(s)	82, 641, 699, 1021, 1404, 1498, 1576, 2056
BstMAI	GTCTC	6 cut(s)	948, 958, 1536, 1709, 1966, 2043
BstMBI	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
BstMCI	CGRYCG	1 cut(s)	998
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 727, 809, 812, 818, 968, 1662, 1677, 1898
BstNI	CCWGG	3 cut(s)	6, 973, 1668
BstNSI	RCATGY	6 cut(s)	43, 178, 427, 825, 1247, 1660
BstPAI	GACNNNNGTC	1 cut(s)	513
BstPI	GGTNACC	4 cut(s)	379, 643, 1207, 1607
BstSCI	CCNGG	5 cut(s)	4, 202, 971, 1666, 1873
BstSFI	CTRYAG	2 cut(s)	525, 813
BstUI	CGCG	1 cut(s)	507
BstV1I	GCAGC	9 cut(s)	199, 380, 445, 489, 790, 799, 1185, 1640, 1879
BstV2I	GAAGAC	2 cut(s)	93, 111
BstX2I	RGATCY	2 cut(s)	696, 1573
BstYI	RGATCY	2 cut(s)	696, 1573
BstZ17I	GTATAC	1 cut(s)	2022
Bsu36I	CCTNAGG	3 cut(s)	1323, 1416, 1424
BtgZI	GCGATG	1 cut(s)	1698
BtrI	CACGTC	1 cut(s)	1002
BtsCI	GGATG	6 cut(s)	487, 732, 896, 1308, 1498, 1801
BtsI	GCAGTG	2 cut(s)	462, 957
BtsIMutI	CAGTG	5 cut(s)	462, 495, 666, 957, 1994
Cac8I	GCNNGC	4 cut(s)	41, 369, 913, 1245
CfoI	GCGC	3 cut(s)	453, 507, 1359
Cfr10I	RCCGGY	1 cut(s)	1932
Cfr13I	GGNCC	7 cut(s)	201, 1108, 1368, 1420, 1664, 1713, 2026
CseI	GACGC	2 cut(s)	179, 710
Csp6I	GTAC	8 cut(s)	98, 132, 169, 538, 829, 1825, 1864, 1924
CspAI	ACCGGT	1 cut(s)	1932
CviQI	GTAC	8 cut(s)	98, 132, 169, 538, 829, 1825, 1864, 1924
DpnI	GATC	8 cut(s)	81, 640, 698, 1020, 1403, 1497, 1575, 2055
DpnII	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
DrdI	GACNNNNNNGTC	1 cut(s)	1951
DseDI	GACNNNNNNGTC	1 cut(s)	1951
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	2 cut(s)	314, 1304
EarI	CTCTTC	2 cut(s)	314, 1304
EciI	GGCGGA	1 cut(s)	992
Eco130I	CCWWGG	2 cut(s)	518, 1967
Eco147I	AGGCCT	1 cut(s)	1966
Eco24I	GRGCYC	1 cut(s)	294
Eco31I	GGTCTC	1 cut(s)	1966
Eco47III	AGCGCT	1 cut(s)	452
Eco57I	CTGAAG	2 cut(s)	458, 1660
Eco72I	CACGTG	1 cut(s)	415
Eco81I	CCTNAGG	3 cut(s)	1323, 1416, 1424
Eco88I	CYCGRG	1 cut(s)	232
Eco91I	GGTNACC	4 cut(s)	379, 643, 1207, 1607
EcoNI	CCTNNNNNAGG	1 cut(s)	1415
EcoO109I	RGGNCCY	4 cut(s)	1108, 1420, 1664, 1713
EcoO65I	GGTNACC	4 cut(s)	379, 643, 1207, 1607
EcoRI	GAATTC	1 cut(s)	840
EcoRII	CCWGG	3 cut(s)	4, 971, 1666
EcoT14I	CCWWGG	2 cut(s)	518, 1967
EcoT38I	GRGCYC	1 cut(s)	294
ErhI	CCWWGG	2 cut(s)	518, 1967
Esp3I	CGTCTC	1 cut(s)	2043
FalI	AAGNNNNNCTT	2 cut(s)	1975, 2007
FaqI	GGGAC	1 cut(s)	1445
FauNDI	CATATG	1 cut(s)	1488
FbaI	TGATCA	2 cut(s)	1401, 2053
FblI	GTMKAC	2 cut(s)	998, 2021
FokI	GGATG	6 cut(s)	494, 739, 903, 1315, 1505, 1808
FriOI	GRGCYC	1 cut(s)	294
FspBI	CTAG	6 cut(s)	215, 513, 908, 1191, 1563, 1968
GlaI	GCGC	3 cut(s)	452, 506, 1358
HaeII	RGCGCY	2 cut(s)	454, 1360
HapII	CCGG	3 cut(s)	204, 1875, 1933
HgaI	GACGC	2 cut(s)	179, 710
HhaI	GCGC	3 cut(s)	453, 507, 1359
Hin1I	GRCGYC	1 cut(s)	2036
Hin6I	GCGC	3 cut(s)	451, 505, 1357
HinP1I	GCGC	3 cut(s)	451, 505, 1357
HincII	GTYRAC	3 cut(s)	999, 1938, 2034
HindII	GTYRAC	3 cut(s)	999, 1938, 2034
HinfI	GANTC	6 cut(s)	65, 71, 247, 881, 1117, 1810
HpaI	GTTAAC	1 cut(s)	1938
HpaII	CCGG	3 cut(s)	204, 1875, 1933
HphI	GGTGA	6 cut(s)	20, 391, 655, 1201, 1601, 1863
Hpy166II	GTNNAC	7 cut(s)	358, 999, 1827, 1837, 1938, 2022, 2034
Hpy188III	TCNNGA	8 cut(s)	83, 227, 251, 667, 1426, 1505, 1760, 2057
Hpy8I	GTNNAC	7 cut(s)	358, 999, 1827, 1837, 1938, 2022, 2034
Hpy99I	CGWCG	5 cut(s)	62, 113, 195, 726, 1003
HpyAV	CCTTC	7 cut(s)	469, 547, 630, 1138, 1562, 1622, 1704
HpyCH4III	ACNGT	8 cut(s)	379, 385, 649, 661, 760, 996, 1051, 1523
HpyCH4IV	ACGT	5 cut(s)	405, 414, 1001, 1806, 2036
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 727, 809, 812, 818, 968, 1662, 1677, 1898
HpySE526I	ACGT	5 cut(s)	405, 414, 1001, 1806, 2036
Hsp92I	GRCGYC	1 cut(s)	2036
HspAI	GCGC	3 cut(s)	451, 505, 1357
Ksp22I	TGATCA	2 cut(s)	1401, 2053
KspAI	GTTAAC	1 cut(s)	1938
Kzo9I	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
LmnI	GCTCC	5 cut(s)	393, 491, 818, 935, 1034
Lsp1109I	GCAGC	9 cut(s)	199, 380, 445, 489, 790, 799, 1185, 1640, 1879
LweI	GCATC	3 cut(s)	293, 717, 881
MaeI	CTAG	6 cut(s)	215, 513, 908, 1191, 1563, 1968
MaeII	ACGT	5 cut(s)	405, 414, 1001, 1806, 2036
MaeIII	GTNAC	8 cut(s)	379, 643, 1060, 1207, 1517, 1607, 1753, 1807
MalI	GATC	8 cut(s)	81, 640, 698, 1020, 1403, 1497, 1575, 2055
MboI	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
MfeI	CAATTG	1 cut(s)	1274
MflI	RGATCY	2 cut(s)	696, 1573
MhlI	GDGCHC	4 cut(s)	15, 294, 390, 1632
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	6 cut(s)	18, 148, 615, 840, 1274, 1902
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	2 cut(s)	1111, 1804
MmeI	TCCRAC	6 cut(s)	81, 173, 704, 1140, 1507, 1859
Mox20I	TGGCCA	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	2 cut(s)	1848, 1937
MslI	CAYNNNNRTG	5 cut(s)	377, 467, 1232, 1491, 1832
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	3 cut(s)	393, 436, 1680
MspI	CCGG	3 cut(s)	204, 1875, 1933
MspR9I	CCNGG	5 cut(s)	6, 204, 973, 1668, 1875
MunI	CAATTG	1 cut(s)	1274
Mva1269I	GAATGC	1 cut(s)	1593
MvaI	CCWGG	3 cut(s)	6, 973, 1668
MvnI	CGCG	1 cut(s)	507
MwoI	GCNNNNNNNGC	9 cut(s)	10, 727, 809, 812, 818, 968, 1662, 1677, 1898
NciI	CCSGG	2 cut(s)	204, 1875
NdeI	CATATG	1 cut(s)	1488
NdeII	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
NlaIV	GGNNCC	2 cut(s)	493, 1109
NmuCI	GTSAC	7 cut(s)	379, 643, 1207, 1517, 1607, 1753, 1807
NspI	RCATGY	6 cut(s)	43, 178, 427, 825, 1247, 1660
OliI	CACNNNNGTG	1 cut(s)	1832
PaeI	GCATGC	2 cut(s)	43, 1247
PceI	AGGCCT	1 cut(s)	1966
PciI	ACATGT	2 cut(s)	174, 423
PcsI	WCGNNNNNNNCGW	3 cut(s)	90, 411, 1946
PctI	GAATGC	1 cut(s)	1593
PfeI	GAWTC	4 cut(s)	65, 71, 247, 881
PflMI	CCANNNNNTGG	2 cut(s)	1104, 1489
PinAI	ACCGGT	1 cut(s)	1932
PleI	GAGTC	2 cut(s)	1111, 1804
PmaCI	CACGTG	1 cut(s)	415
PmlI	CACGTG	1 cut(s)	415
PpsI	GAGTC	2 cut(s)	1111, 1804
Ppu21I	YACGTR	2 cut(s)	415, 1807
PscI	ACATGT	2 cut(s)	174, 423
PshAI	GACNNNNGTC	1 cut(s)	513
PsiI	TTATAA	1 cut(s)	1961
Psp6I	CCWGG	3 cut(s)	4, 971, 1666
PspCI	CACGTG	1 cut(s)	415
PspEI	GGTNACC	4 cut(s)	379, 643, 1207, 1607
PspGI	CCWGG	3 cut(s)	4, 971, 1666
PspN4I	GGNNCC	2 cut(s)	493, 1109
PspPI	GGNCC	7 cut(s)	201, 1108, 1368, 1420, 1664, 1713, 2026
PstI	CTGCAG	1 cut(s)	817
PsuI	RGATCY	2 cut(s)	696, 1573
PvuII	CAGCTG	1 cut(s)	436
RsaI	GTAC	8 cut(s)	99, 133, 170, 539, 830, 1826, 1865, 1925
RsaNI	GTAC	8 cut(s)	98, 132, 169, 538, 829, 1825, 1864, 1924
RseI	CAYNNNNRTG	5 cut(s)	377, 467, 1232, 1491, 1832
SalI	GTCGAC	1 cut(s)	997
SaqAI	TTAA	2 cut(s)	1848, 1937
Sau3AI	GATC	8 cut(s)	79, 638, 696, 1018, 1401, 1495, 1573, 2053
Sau96I	GGNCC	7 cut(s)	201, 1108, 1368, 1420, 1664, 1713, 2026
ScaI	AGTACT	1 cut(s)	539
SchI	GAGTC	2 cut(s)	1111, 1804
ScrFI	CCNGG	5 cut(s)	6, 204, 973, 1668, 1875
SduI	GDGCHC	4 cut(s)	15, 294, 390, 1632
SfaNI	GCATC	3 cut(s)	293, 717, 881
SfcI	CTRYAG	2 cut(s)	525, 813
SmiMI	CAYNNNNRTG	5 cut(s)	377, 467, 1232, 1491, 1832
SmlI	CTYRAG	2 cut(s)	533, 1505
SmoI	CTYRAG	2 cut(s)	533, 1505
SpeI	ACTAGT	2 cut(s)	512, 1190
SphI	GCATGC	2 cut(s)	43, 1247
Sse9I	AATT	6 cut(s)	18, 148, 615, 840, 1274, 1902
SseBI	AGGCCT	1 cut(s)	1966
SsiI	CCGC	5 cut(s)	391, 894, 977, 1371, 1680
SspI	AATATT	2 cut(s)	603, 1513
SspMI	CTAG	6 cut(s)	215, 513, 908, 1191, 1563, 1968
StuI	AGGCCT	1 cut(s)	1966
StyD4I	CCNGG	5 cut(s)	4, 202, 971, 1666, 1873
StyI	CCWWGG	2 cut(s)	518, 1967
TaaI	ACNGT	8 cut(s)	379, 385, 649, 661, 760, 996, 1051, 1523
TaiI	ACGT	5 cut(s)	408, 417, 1004, 1809, 2039
TaqI	TCGA	2 cut(s)	228, 998
TasI	AATT	6 cut(s)	18, 148, 615, 840, 1274, 1902
TatI	WGTACW	3 cut(s)	131, 168, 537
TauI	GCSGC	3 cut(s)	897, 1373, 1683
TfiI	GAWTC	4 cut(s)	65, 71, 247, 881
Tru1I	TTAA	2 cut(s)	1848, 1937
Tru9I	TTAA	2 cut(s)	1848, 1937
TscAI	CASTG	5 cut(s)	469, 502, 666, 964, 2001
TseFI	GTSAC	7 cut(s)	379, 643, 1207, 1517, 1607, 1753, 1807
TseI	GCWGC	9 cut(s)	187, 393, 433, 502, 803, 812, 1198, 1653, 1892
Tsp45I	GTSAC	7 cut(s)	379, 643, 1207, 1517, 1607, 1753, 1807
TspDTI	ATGAA	2 cut(s)	1032, 1404
TspGWI	ACGGA	2 cut(s)	416, 948
TspRI	CASTG	5 cut(s)	469, 502, 666, 964, 2001
Van91I	CCANNNNNTGG	2 cut(s)	1104, 1489
XagI	CCTNNNNNAGG	1 cut(s)	1415
XapI	RAATTY	3 cut(s)	18, 148, 840
XceI	RCATGY	6 cut(s)	43, 178, 427, 825, 1247, 1660
XmaJI	CCTAGG	1 cut(s)	1967
XmiI	GTMKAC	2 cut(s)	998, 2021
XspI	CTAG	6 cut(s)	215, 513, 908, 1191, 1563, 1968
ZraI	GACGTC	1 cut(s)	2037
ZrmI	AGTACT	1 cut(s)	539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.