Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007370

Physical Location & Seq

Genomic Coordinates Reverse (-)

14158235 .. 14163779

Gene Structure 5545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0152600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGATCATCTCCAAAGCTTCAAACTTTACTGCCCAAGGAGCTCTCTCCCCTCTCTACACCCCCAAATGGGCCCTCAAAAGCCCACACCCTCACGTCTGCATGGTCTTGTCGTCCTCCGCCGACGGACCCAGATGGAACCAGTGCCACCATTTCAACGGCAACAAGAACGGCGCCGTTTACAAGAAACCCAGAAACGCAGAAGAGGCAGATGAAGAAGGAGGAGAGAGAAGGGTGAGCTGTGAAGTGGATATGATTTCGTGGCGGGAGCGCCGAGTCAAGGCCGAGATTTCGGTCAATGCCGACGTCGATTCCGTCTGGAACGCTCTCACGGATTACGAGCGTCTCGCTGACTTCATCCCCAATCTTGTTTCCAGTGGGAGGATTCCATGTCCACATCCTGGGCGTATTTGGCTGGAGCAGAGAGGCTTGCAGAGAGCATTATATTGGCACATTGAAGCTCGAGTTGTTTTGGACCTTCAGGAGTTTTCCAATTTGAGTGGTAATGATCGTGAGCTTCACTTTTCCATGGTTGATGGGGACTTCAAAAAGTTTGAAGGCAAATGGTCTATGAAATGCGGGACAAGGTCATCATCAACAATTTTATCATATGAAGTAAATGTAATACCGAGATTCAACTTCCCTGCCATTTTCTTGGAGAGGATTATCAGATCAGATCTCCCTGTCAATCTTCGGGCCTTGGCTTGTAGGTCTGAAAAGGCTTTTGAAGGGGGAAAAAAGATAGCAATAGAAGAAAGCTCCAAGTCTAGCATGACTAATGGTGTCACTAGTTCACTCCAAAAAGACATGGATGGTTCTTTGTGTGAAAAGGATTATACACTTAACGAGTTTAAAGCGAATTTACCTGGCCCTACTGCTAAATCTTTGCCCCCAGCTTCTTCTGAGTTGAATAGTAATTGGGGTGTTTTTGGAAAAGTCTGCAGACTTGATAGGCCTTGCTTGGTGGATGAGGTTCATCTTCGGAGATTCGATGGTCTATTGGAAAATGGAGGCGTCCATCGTGGTGTTGTTGCTAGCATAACAGTAAAAGCTCCTGTTCGTGAAGTGTGGGGTGTTTTGACAGCTTACGAAAGTCTTCCCGAGATAGTCCCGAATTTGGCAATCAGTCGGATATTGTCAAGAGAAAACAACAAAGTCCGAATTCTTCAGGAAGGATGTAAGGGCTTACTTTATATGGTACTTCATGCACGAGTTGTCCTAGACTTGTGCGAACAGCTTGAACAGGAGATAAGTTTTGAACAAGTTGAAGGGGACTTCGACTCATTTAGGGGTAAATGGGTTCTTGAGCAGCTAGGAAGTCATCACACGCTGTTGAAGTACACTGTTGAATCGAAAATGCGCAAGGATACTTTTCTCTCTGAAGCTATCATGGAAGAGGTCATATACGAAGATCTCCCTTCAAATTTATGTACAATACGAGACTACATAGAAAAGAGGGAGGTAGCACAGTCATCGAAAGCATGTGAAGAAAAAATAAGCTTGGAGGAACAAACTGCTTCATCCAGTACAGACCATAATGATGATGGTTGTATAACAGTTGATCAATTGTCTGATTCCGATGCTCAGAGTTCATCTAGTCAAAGGCCAAGGGTCCCAGGATTGCAGAGGGATATTGAAGTTTTGAAAGCCGAGCTCCTGAAATTTATTGCAGAGCATGGGCAGGAAGGATTTATGCCCATGAGAAAGCAACTTCGTTTACAGGGAAGAGTAGATATCGAGAAAGCAATCACACGCATGGGTGGATTCAGAAGGATTGCTACACTGATGAATCTTTCTCTTGCTTATAAGCATCGAAAACCAAAGGGTTACTGGGATAATCTTGAGAATTTGCAGGAAGAGATTAGTCGATTTCAGAGGAGCTGGGGAATGGACCCTTCATACATGCCCAGCAGGAAGTCATTCGAGCGTGCAGGGCGGTATGACATTGCGCGTGCATTAGAAAAGTGGGGCGGCCTTCATGAAGTTTCGCGTCTTCTGTCACTCAATGTGAGGCGCCCCAATAGACGGCTGAACATTGCCAGGGATGTAAAAAGTGATCGTGTAGTATCAACTAACGCAGATGGTGCAAAAGATGCACCATCCAATCCCTACGTATCTCAAGATACACACAAGTGGATCTCAGAATTAAAGCATTTGGATTGCAATTGGGTAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

724

Amino Acids

82.19

Weight (kDa)

7.02

Isoelectric Point (pI)

49.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Polyketide_cyc	PF03364	98 - 233	3e-17	Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc	PF03364	348 - 475	3.2e-18	Polyketide cyclase / dehydrase and lipid transport

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54250 AT5G54250 AT5G54250 AT5G54250
fragaria_vesca	FvH4_3g21060
malus_domestica	MD03G1218000.v1.1 MD11G1235800.v1.1
prunus_persica	Prupe.4G191200_v2.0.a1
pyrus_communis	pycom03g16750 pycom1049g00060 pycom1049g00070 pycom11g20730
rosa_chinensis	RchiOBHm_Chr5g0036081 RchiOBHm_Chr5g0036091
rosa_laevigata	RLG00000033664
rosa_multiflora	Rmu_sc0000382.1_g000031
rosa_roxburghii	Rroxscaffold_1G00044670
rosa_rugosa	Rorug05G0152600 Rorug05G0152600 Rorug05G0152600
rosa_samantha	Rh5AG246800 Rh5BG247100 Rh5CG278200 Rh5DG255700
rosa_wichuraiana	Rw5G022650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1803
AatII	GACGTC	1 cut(s)	306
Acc16I	TGCGCA	1 cut(s)	1358
AccB1I	GGYRCC	2 cut(s)	170, 2010
AccB7I	CCANNNNNTGG	1 cut(s)	398
AccII	CGCG	2 cut(s)	1948, 1987
AciI	CCGC	5 cut(s)	117, 262, 576, 1933, 1968
AclWI	GGATC	1 cut(s)	2141
AcsI	RAATTY	6 cut(s)	856, 1111, 1158, 1420, 1658, 1843
AcuI	CTGAAG	3 cut(s)	461, 1148, 1398
AcyI	GRCGYC	4 cut(s)	171, 303, 1011, 2011
AfaI	GTAC	4 cut(s)	1197, 1337, 1429, 1525
AfiI	CCNNNNNNNGG	7 cut(s)	66, 67, 277, 378, 398, 1114, 2022
AhlI	ACTAGT	1 cut(s)	785
AjiI	CACGTC	1 cut(s)	94
AjnI	CCWGG	4 cut(s)	397, 862, 1612, 2036
AleI	CACNNNNGTG	1 cut(s)	2128
Alw21I	GWGCWC	2 cut(s)	43, 1653
Alw26I	GTCTC	2 cut(s)	347, 1431
AlwI	GGATC	1 cut(s)	2141
Ama87I	CYCGRG	2 cut(s)	459, 1097
AoxI	GGCC	7 cut(s)	69, 279, 693, 865, 950, 1601, 1969
ApaI	GGGCCC	1 cut(s)	73
ApeKI	GCWGC	1 cut(s)	1306
ApoI	RAATTY	6 cut(s)	856, 1111, 1158, 1420, 1658, 1843
Asp700I	GAANNNNTTC	2 cut(s)	1092, 1916
AspLEI	GCGC	5 cut(s)	173, 270, 1359, 1948, 2013
AspS9I	GGNCC	8 cut(s)	69, 70, 125, 472, 693, 866, 1609, 1888
AsuHPI	GGTGA	1 cut(s)	244
AsuNHI	GCTAGC	1 cut(s)	1031
AvaI	CYCGRG	2 cut(s)	459, 1097
AvaII	GGWCC	4 cut(s)	125, 472, 1609, 1888
BaeGI	GKGCMC	1 cut(s)	73
BanI	GGYRCC	2 cut(s)	170, 2010
BanII	GRGCYC	3 cut(s)	43, 73, 1653
BarI	GAAGNNNNNNTAC	2 cut(s)	1759, 1791
BauI	CACGAG	1 cut(s)	1206
BbsI	GAAGAC	2 cut(s)	1085, 1982
Bbv12I	GWGCWC	2 cut(s)	43, 1653
BbvI	GCAGC	1 cut(s)	1318
BccI	CCATC	8 cut(s)	126, 527, 803, 983, 1023, 1535, 2072, 2104
BceAI	ACGGC	4 cut(s)	158, 172, 184, 2039
BcgI	CGANNNNNNTGC	2 cut(s)	1452, 1486
BciT130I	CCWGG	4 cut(s)	399, 864, 1614, 2038
BciVI	GTATCC	1 cut(s)	1357
BclI	TGATCA	2 cut(s)	3, 1558
BcoDI	GTCTC	2 cut(s)	347, 1431
BcuI	ACTAGT	1 cut(s)	785
BfaI	CTAG	6 cut(s)	765, 786, 1032, 1217, 1310, 1593
BfmI	CTRYAG	1 cut(s)	937
BfoI	RGCGCY	3 cut(s)	174, 271, 2014
BfuI	GTATCC	1 cut(s)	1357
BglII	AGATCT	2 cut(s)	673, 1408
BisI	GCNGC	2 cut(s)	1307, 1969
BlsI	GCNGC	2 cut(s)	1308, 1970
Bme1390I	CCNGG	4 cut(s)	399, 864, 1614, 2038
Bme18I	GGWCC	4 cut(s)	125, 472, 1609, 1888
BmeT110I	CYCGRG	2 cut(s)	459, 1097
BmgBI	CACGTC	1 cut(s)	94
BmgT120I	GGNCC	8 cut(s)	69, 70, 125, 472, 693, 866, 1609, 1888
BmiI	GGNNCC	8 cut(s)	71, 127, 137, 172, 1610, 1611, 1890, 2012
BmrFI	CCNGG	4 cut(s)	399, 864, 1614, 2038
BmrI	ACTGGG	1 cut(s)	1837
BmsI	GCATC	3 cut(s)	1567, 1816, 2080
BmtI	GCTAGC	1 cut(s)	1035
BmuI	ACTGGG	1 cut(s)	1837
BpiI	GAAGAC	2 cut(s)	1085, 1982
BpmI	CTGGAG	1 cut(s)	434
BpuEI	CTTGAG	3 cut(s)	1322, 1859, 2100
BsaAI	YACGTR	1 cut(s)	2110
BsaHI	GRCGYC	4 cut(s)	171, 303, 1011, 2011
BsaJI	CCNNGG	7 cut(s)	34, 398, 525, 696, 1604, 1612, 2037
Bsc4I	CCNNNNNNNGG	7 cut(s)	66, 67, 277, 378, 398, 1114, 2022
Bse1I	ACTGG	4 cut(s)	139, 372, 1521, 1832
Bse3DI	GCAATG	2 cut(s)	1941, 2031
BseBI	CCWGG	4 cut(s)	399, 864, 1614, 2038
BseDI	CCNNGG	7 cut(s)	34, 398, 525, 696, 1604, 1612, 2037
BseGI	GGATG	8 cut(s)	354, 394, 814, 970, 1178, 1517, 2047, 2096
BseLI	CCNNNNNNNGG	7 cut(s)	66, 67, 277, 378, 398, 1114, 2022
BseMI	GCAATG	2 cut(s)	1941, 2031
BseMII	CTCAG	3 cut(s)	891, 1595, 2151
BseNI	ACTGG	4 cut(s)	139, 372, 1521, 1832
BseRI	GAGGAG	2 cut(s)	234, 1888
BseSI	GKGCMC	1 cut(s)	73
BseXI	GCAGC	1 cut(s)	1318
BseYI	CCCAGC	3 cut(s)	889, 1878, 1904
BsgI	GTGCAG	1 cut(s)	1947
Bsh1236I	CGCG	2 cut(s)	1948, 1987
BshFI	GGCC	7 cut(s)	71, 281, 695, 867, 952, 1603, 1971
BshNI	GGYRCC	2 cut(s)	170, 2010
BsiHKAI	GWGCWC	2 cut(s)	43, 1653
BsiHKCI	CYCGRG	2 cut(s)	459, 1097
BslFI	GGGAC	5 cut(s)	551, 592, 1091, 1283, 1595
BslI	CCNNNNNNNGG	7 cut(s)	66, 67, 277, 378, 398, 1114, 2022
BsmAI	GTCTC	2 cut(s)	347, 1431
BsmBI	CGTCTC	1 cut(s)	347
BsmFI	GGGAC	5 cut(s)	551, 592, 1091, 1283, 1595
BsnI	GGCC	7 cut(s)	71, 281, 695, 867, 952, 1603, 1971
BsoBI	CYCGRG	2 cut(s)	459, 1097
Bsp120I	GGGCCC	1 cut(s)	69
Bsp1286I	GDGCHC	3 cut(s)	43, 73, 1653
Bsp1407I	TGTACA	1 cut(s)	1427
Bsp143I	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
Bsp19I	CCATGG	1 cut(s)	525
BspACI	CCGC	5 cut(s)	117, 262, 576, 1933, 1968
BspANI	GGCC	7 cut(s)	71, 281, 695, 867, 952, 1603, 1971
BspCNI	CTCAG	3 cut(s)	892, 1594, 2150
BspFNI	CGCG	2 cut(s)	1948, 1987
BspHI	TCATGA	1 cut(s)	1975
BspLI	GGNNCC	8 cut(s)	71, 127, 137, 172, 1610, 1611, 1890, 2012
BspMAI	CTGCAG	1 cut(s)	941
BspOI	GCTAGC	1 cut(s)	1035
BspPI	GGATC	1 cut(s)	2141
BspT107I	GGYRCC	2 cut(s)	170, 2010
BsrDI	GCAATG	2 cut(s)	1941, 2031
BsrGI	TGTACA	1 cut(s)	1427
BsrI	ACTGG	4 cut(s)	139, 372, 1521, 1832
BssECI	CCNNGG	7 cut(s)	34, 398, 525, 696, 1604, 1612, 2037
BssMI	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
BssNI	GRCGYC	4 cut(s)	171, 303, 1011, 2011
BssSI	CACGAG	1 cut(s)	1206
BssT1I	CCWWGG	4 cut(s)	34, 525, 696, 1604
Bst2BI	CACGAG	1 cut(s)	1206
Bst2UI	CCWGG	4 cut(s)	399, 864, 1614, 2038
Bst4CI	ACNGT	4 cut(s)	1042, 1342, 1467, 1555
Bst6I	CTCTTC	4 cut(s)	195, 1386, 1717, 1848
BstACI	GRCGYC	4 cut(s)	171, 303, 1011, 2011
BstAPI	GCANNNNNTGC	2 cut(s)	2081, 2090
BstAUI	TGTACA	1 cut(s)	1427
BstBAI	YACGTR	1 cut(s)	2110
BstC8I	GCNNGC	4 cut(s)	428, 1033, 1926, 1950
BstDEI	CTNAG	3 cut(s)	900, 1581, 2137
BstDSI	CCRYGG	1 cut(s)	525
BstF5I	GGATG	8 cut(s)	354, 394, 814, 970, 1178, 1517, 2047, 2096
BstFNI	CGCG	2 cut(s)	1948, 1987
BstH2I	RGCGCY	3 cut(s)	174, 271, 2014
BstHHI	GCGC	5 cut(s)	173, 270, 1359, 1948, 2013
BstKTI	GATC	8 cut(s)	6, 508, 671, 676, 1411, 1561, 2056, 2136
BstMAI	GTCTC	2 cut(s)	347, 1431
BstMBI	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 203, 409, 1930, 2081, 2090
BstNI	CCWGG	4 cut(s)	399, 864, 1614, 2038
BstNSI	RCATGY	2 cut(s)	1482, 1903
BstSCI	CCNGG	4 cut(s)	397, 862, 1612, 2036
BstSFI	CTRYAG	1 cut(s)	937
BstSLI	GKGCMC	1 cut(s)	73
BstSNI	TACGTA	1 cut(s)	2110
BstUI	CGCG	2 cut(s)	1948, 1987
BstV1I	GCAGC	1 cut(s)	1318
BstV2I	GAAGAC	2 cut(s)	1085, 1982
BstX2I	RGATCY	3 cut(s)	673, 1408, 2133
BstXI	CCANNNNNNTGG	1 cut(s)	652
BstYI	RGATCY	3 cut(s)	673, 1408, 2133
BsuI	GTATCC	1 cut(s)	1357
BsuRI	GGCC	7 cut(s)	71, 281, 695, 867, 952, 1603, 1971
BtgI	CCRYGG	1 cut(s)	525
BtrI	CACGTC	1 cut(s)	94
BtsCI	GGATG	8 cut(s)	354, 394, 814, 970, 1178, 1517, 2047, 2096
BtsIMutI	CAGTG	4 cut(s)	146, 379, 1338, 1778
Cac8I	GCNNGC	4 cut(s)	428, 1033, 1926, 1950
CciI	TCATGA	1 cut(s)	1975
CfoI	GCGC	5 cut(s)	173, 270, 1359, 1948, 2013
Cfr13I	GGNCC	8 cut(s)	69, 70, 125, 472, 693, 866, 1609, 1888
CseI	GACGC	3 cut(s)	329, 1000, 1976
Csp6I	GTAC	4 cut(s)	1196, 1336, 1428, 1524
CspCI	CAANNNNNGTGG	2 cut(s)	478, 513
CviQI	GTAC	4 cut(s)	1196, 1336, 1428, 1524
DdeI	CTNAG	3 cut(s)	900, 1581, 2137
DinI	GGCGCC	2 cut(s)	172, 2012
DpnI	GATC	8 cut(s)	5, 507, 670, 675, 1410, 1560, 2055, 2135
DpnII	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
DraI	TTTAAA	1 cut(s)	850
Eam1104I	CTCTTC	4 cut(s)	195, 1386, 1717, 1848
EarI	CTCTTC	4 cut(s)	195, 1386, 1717, 1848
EciI	GGCGGA	1 cut(s)	106
Ecl136II	GAGCTC	2 cut(s)	41, 1651
Eco105I	TACGTA	1 cut(s)	2110
Eco130I	CCWWGG	4 cut(s)	34, 525, 696, 1604
Eco147I	AGGCCT	1 cut(s)	952
Eco24I	GRGCYC	3 cut(s)	43, 73, 1653
Eco32I	GATATC	1 cut(s)	1732
Eco47I	GGWCC	4 cut(s)	125, 472, 1609, 1888
Eco53kI	GAGCTC	2 cut(s)	41, 1651
Eco57I	CTGAAG	3 cut(s)	461, 1148, 1398
Eco88I	CYCGRG	2 cut(s)	459, 1097
EcoICRI	GAGCTC	2 cut(s)	41, 1651
EcoO109I	RGGNCCY	2 cut(s)	70, 1609
EcoRI	GAATTC	1 cut(s)	1158
EcoRII	CCWGG	4 cut(s)	397, 862, 1612, 2036
EcoRV	GATATC	1 cut(s)	1732
EcoT14I	CCWWGG	4 cut(s)	34, 525, 696, 1604
EcoT38I	GRGCYC	3 cut(s)	43, 73, 1653
EgeI	GGCGCC	2 cut(s)	172, 2012
EheI	GGCGCC	2 cut(s)	172, 2012
ErhI	CCWWGG	4 cut(s)	34, 525, 696, 1604
Esp3I	CGTCTC	1 cut(s)	347
FaqI	GGGAC	5 cut(s)	551, 592, 1091, 1283, 1595
FauI	CCCGC	2 cut(s)	255, 569
FauNDI	CATATG	1 cut(s)	607
FbaI	TGATCA	2 cut(s)	3, 1558
Fnu4HI	GCNGC	2 cut(s)	1307, 1969
FokI	GGATG	8 cut(s)	341, 381, 821, 977, 1185, 1504, 2054, 2083
FriOI	GRGCYC	3 cut(s)	43, 73, 1653
Fsp4HI	GCNGC	2 cut(s)	1307, 1969
FspBI	CTAG	6 cut(s)	765, 786, 1032, 1217, 1310, 1593
FspI	TGCGCA	1 cut(s)	1358
GlaI	GCGC	5 cut(s)	172, 269, 1358, 1947, 2012
GluI	GCNGC	2 cut(s)	1307, 1969
GsaI	CCCAGC	3 cut(s)	893, 1882, 1908
GsuI	CTGGAG	1 cut(s)	434
HaeII	RGCGCY	3 cut(s)	174, 271, 2014
HaeIII	GGCC	7 cut(s)	71, 281, 695, 867, 952, 1603, 1971
HgaI	GACGC	3 cut(s)	329, 1000, 1976
HhaI	GCGC	5 cut(s)	173, 270, 1359, 1948, 2013
Hin1I	GRCGYC	4 cut(s)	171, 303, 1011, 2011
Hin6I	GCGC	5 cut(s)	171, 268, 1357, 1946, 2011
HinP1I	GCGC	5 cut(s)	171, 268, 1357, 1946, 2011
HindIII	AAGCTT	2 cut(s)	15, 1495
HphI	GGTGA	1 cut(s)	244
Hpy166II	GTNNAC	5 cut(s)	178, 392, 791, 1338, 1715
Hpy8I	GTNNAC	5 cut(s)	178, 392, 791, 1338, 1715
Hpy99I	CGWCG	3 cut(s)	125, 305, 308
HpyCH4III	ACNGT	4 cut(s)	1042, 1342, 1467, 1555
HpyCH4IV	ACGT	3 cut(s)	93, 303, 2109
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 203, 409, 1930, 2081, 2090
HpyF3I	CTNAG	3 cut(s)	900, 1581, 2137
HpySE526I	ACGT	3 cut(s)	93, 303, 2109
Hsp92I	GRCGYC	4 cut(s)	171, 303, 1011, 2011
HspAI	GCGC	5 cut(s)	171, 268, 1357, 1946, 2011
KasI	GGCGCC	2 cut(s)	170, 2010
KflI	GGGWCCC	1 cut(s)	1609
Ksp22I	TGATCA	2 cut(s)	3, 1558
Kzo9I	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
LmnI	GCTCC	7 cut(s)	38, 265, 415, 761, 1054, 1656, 1875
Lsp1109I	GCAGC	1 cut(s)	1318
LweI	GCATC	3 cut(s)	1567, 1816, 2080
MaeI	CTAG	6 cut(s)	765, 786, 1032, 1217, 1310, 1593
MaeII	ACGT	3 cut(s)	93, 303, 2109
MaeIII	GTNAC	3 cut(s)	781, 1823, 1995
MalI	GATC	8 cut(s)	5, 507, 670, 675, 1410, 1560, 2055, 2135
MboI	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
MfeI	CAATTG	2 cut(s)	1562, 2161
MflI	RGATCY	3 cut(s)	673, 1408, 2133
MhlI	GDGCHC	3 cut(s)	43, 73, 1653
Mly113I	GGCGCC	2 cut(s)	171, 2011
MlyI	GAGTC	2 cut(s)	282, 1271
MmeI	TCCRAC	1 cut(s)	1106
MroXI	GAANNNNTTC	2 cut(s)	1092, 1916
MseI	TTAA	3 cut(s)	840, 849, 2144
MslI	CAYNNNNRTG	4 cut(s)	1020, 1536, 1751, 2128
MspR9I	CCNGG	4 cut(s)	399, 864, 1614, 2038
MunI	CAATTG	2 cut(s)	1562, 2161
MvaI	CCWGG	4 cut(s)	399, 864, 1614, 2038
MvnI	CGCG	2 cut(s)	1948, 1987
MwoI	GCNNNNNNNGC	6 cut(s)	38, 203, 409, 1930, 2081, 2090
NarI	GGCGCC	2 cut(s)	171, 2011
NcoI	CCATGG	1 cut(s)	525
NdeI	CATATG	1 cut(s)	607
NdeII	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
NheI	GCTAGC	1 cut(s)	1031
NlaIV	GGNNCC	8 cut(s)	71, 127, 137, 172, 1610, 1611, 1890, 2012
NmeAIII	GCCGAG	3 cut(s)	296, 307, 1672
NmuCI	GTSAC	2 cut(s)	781, 1995
NsbI	TGCGCA	1 cut(s)	1358
NspI	RCATGY	2 cut(s)	1482, 1903
OliI	CACNNNNGTG	1 cut(s)	2128
PaeR7I	CTCGAG	1 cut(s)	459
PagI	TCATGA	1 cut(s)	1975
PceI	AGGCCT	1 cut(s)	952
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PdmI	GAANNNNTTC	2 cut(s)	1092, 1916
PfeI	GAWTC	8 cut(s)	308, 382, 630, 984, 1346, 1571, 1761, 1786
PflFI	GACNNNGTC	1 cut(s)	583
PflMI	CCANNNNNTGG	1 cut(s)	398
PkrI	GCNGC	2 cut(s)	1308, 1970
PleI	GAGTC	2 cut(s)	281, 1271
PluTI	GGCGCC	2 cut(s)	174, 2014
PpsI	GAGTC	2 cut(s)	281, 1271
Ppu21I	YACGTR	1 cut(s)	2110
PpuMI	RGGWCCY	1 cut(s)	1609
PsiI	TTATAA	1 cut(s)	1803
Psp124BI	GAGCTC	2 cut(s)	43, 1653
Psp5II	RGGWCCY	1 cut(s)	1609
Psp6I	CCWGG	4 cut(s)	397, 862, 1612, 2036
PspFI	CCCAGC	3 cut(s)	889, 1878, 1904
PspGI	CCWGG	4 cut(s)	397, 862, 1612, 2036
PspN4I	GGNNCC	8 cut(s)	71, 127, 137, 172, 1610, 1611, 1890, 2012
PspOMI	GGGCCC	1 cut(s)	69
PspPI	GGNCC	8 cut(s)	69, 70, 125, 472, 693, 866, 1609, 1888
PspPPI	RGGWCCY	1 cut(s)	1609
PspXI	VCTCGAGB	1 cut(s)	459
PstI	CTGCAG	1 cut(s)	941
PsuI	RGATCY	3 cut(s)	673, 1408, 2133
PsyI	GACNNNGTC	1 cut(s)	583
RsaI	GTAC	4 cut(s)	1197, 1337, 1429, 1525
RsaNI	GTAC	4 cut(s)	1196, 1336, 1428, 1524
RseI	CAYNNNNRTG	4 cut(s)	1020, 1536, 1751, 2128
SacI	GAGCTC	2 cut(s)	43, 1653
SaqAI	TTAA	3 cut(s)	840, 849, 2144
SatI	GCNGC	2 cut(s)	1307, 1969
Sau3AI	GATC	8 cut(s)	3, 505, 668, 673, 1408, 1558, 2053, 2133
Sau96I	GGNCC	8 cut(s)	69, 70, 125, 472, 693, 866, 1609, 1888
SchI	GAGTC	2 cut(s)	282, 1271
ScrFI	CCNGG	4 cut(s)	399, 864, 1614, 2038
SduI	GDGCHC	3 cut(s)	43, 73, 1653
SfaNI	GCATC	3 cut(s)	1567, 1816, 2080
SfcI	CTRYAG	1 cut(s)	937
SfoI	GGCGCC	2 cut(s)	172, 2012
Sfr274I	CTCGAG	1 cut(s)	459
SinI	GGWCC	4 cut(s)	125, 472, 1609, 1888
SlaI	CTCGAG	1 cut(s)	459
SmiMI	CAYNNNNRTG	4 cut(s)	1020, 1536, 1751, 2128
SmlI	CTYRAG	4 cut(s)	459, 1301, 1838, 2115
SmoI	CTYRAG	4 cut(s)	459, 1301, 1838, 2115
SnaBI	TACGTA	1 cut(s)	2110
SpeI	ACTAGT	1 cut(s)	785
SseBI	AGGCCT	1 cut(s)	952
SsiI	CCGC	5 cut(s)	117, 262, 576, 1933, 1968
SspDI	GGCGCC	2 cut(s)	170, 2010
SspMI	CTAG	6 cut(s)	765, 786, 1032, 1217, 1310, 1593
SstI	GAGCTC	2 cut(s)	43, 1653
StuI	AGGCCT	1 cut(s)	952
StyD4I	CCNGG	4 cut(s)	397, 862, 1612, 2036
StyI	CCWWGG	4 cut(s)	34, 525, 696, 1604
TaaI	ACNGT	4 cut(s)	1042, 1342, 1467, 1555
TaiI	ACGT	3 cut(s)	96, 306, 2112
TaqII	GACCGA	1 cut(s)	280
TatI	WGTACW	3 cut(s)	1335, 1427, 1523
TauI	GCSGC	1 cut(s)	1971
TfiI	GAWTC	8 cut(s)	308, 382, 630, 984, 1346, 1571, 1761, 1786
Tru1I	TTAA	3 cut(s)	840, 849, 2144
Tru9I	TTAA	3 cut(s)	840, 849, 2144
TscAI	CASTG	4 cut(s)	146, 379, 1345, 1785
TseFI	GTSAC	2 cut(s)	781, 1995
TseI	GCWGC	1 cut(s)	1306
Tsp45I	GTSAC	2 cut(s)	781, 1995
TspGWI	ACGGA	3 cut(s)	138, 301, 344
TspRI	CASTG	4 cut(s)	146, 379, 1345, 1785
Tth111I	GACNNNGTC	1 cut(s)	583
Van91I	CCANNNNNTGG	1 cut(s)	398
VpaK11BI	GGWCC	4 cut(s)	125, 472, 1609, 1888
XapI	RAATTY	6 cut(s)	856, 1111, 1158, 1420, 1658, 1843
XceI	RCATGY	2 cut(s)	1482, 1903
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1538, 1824
XhoI	CTCGAG	1 cut(s)	459
XmnI	GAANNNNTTC	2 cut(s)	1092, 1916
XspI	CTAG	6 cut(s)	765, 786, 1032, 1217, 1310, 1593
ZraI	GACGTC	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.