Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004984

Physical Location & Seq

Genomic Coordinates Reverse (-)

16659515 .. 16664835

Gene Structure 5321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g23572.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGGATCTGACGCCTAGGGTTGAGAAGCGGCCAATTGCAGACGCGGAATCGGGGGCCCAGCCTAGCAAGAAGCCCAGATGCGAGAGCGACTTGAAGAGAGTGGCCGAGATTGTGCTGGCTTTGTCCACCTTGGCCAAGATTCGAGGCGGTGAGAAGCCGACGGAGCCGGAGATTGGGCTCATCGAGGAGGCGAGGGCCAGGCTGGTCGAGCTCTGCGAGGGTTTGCCGCCTAAGGAGATTGTCGCCAGGGACACGATTTCAGCTGTGATTGAGAATTTGGGGCTTAATCCCAAGGTTAAGGAGCAGGGATTAGGGTTTCGGGGTCCCCAGTTGACGGTTGCCGAGAAGTTTTCGCTGACTAAGAGGAAGATGGATGAATCCAAGAAATATGCTGCACAAACTGCTACATATTCACCTCAACCATTAAAAACAAGCTTCAGTGCAGCTGCTGAAAGCCATGGGATGCCACATACTGTTCGTATGTCAACAGATAACCCGAACCATGCACCAATTTCAGCCGGTGGTTTTGCAGCTTCTCCTCTCGTTCATGTTTCTGCAACAACTCCTACATCTGCACAGTATCAGTTGCCCGTGGGTTCTGGCAGTGTGCCTGGTAGCCATATAGGAAGAGATCCATCTTCCCCAGCATTGCCTAGAGGTGAAAGAGTACAGATAAGAACTGATGGAGGATCCAATGGGTCTTCTTATGCTTATCAAGTACAAGCAAATTCTTCTGCAAATCATCCACCCGTTAATGCTCCAACTTGGTCAACACAAAATCAAAGTGGACCAGAAAACAAGGTGCCAAGTCATACTTCTGTCAGGGTTGAAGGAACTGCTGGTATGAGTAAGCCAGCAATGACTCCTCTAGCAGCACGAGATCAGAATTCTAGGTCATTTACCTCTCAGCCATCTTCTGGACAAGTGCCTGGCGGACACCAGCCTTCACCAAAAATTCGCTTTGTTCAAACTTCTTCAGTTCCTAATAATCACAACGAGATTGCCAGAATTATTCAGAAATTATTGCAACCACATCTTCCTGATCATCCAACATGGATCCCTCCATCAAGGGATTACATGAGTAAGGCTTTGACTTGCCAAACTTGCCAGATCAGCATCAATGAGGTAGATAATGTTCTTATATGTGATGCATGTGAAAAAGGATATCACATTACATGCGCACAAGCACCTAACCAGAGAGGAATTCCTAGAGGTGAATGGCACTGCACAAGATGCTTGTCGCTAAGCAATGGAAAGCCTTTGCCTCCTAAGTATGGGCGTGTTATGAGAAGTAATATACAATTAAAAGCCCCTTCCAGCACGGTCCCTTCCAGTACAGTTGCTTCCAGCACTGTTGCTTCTGCTACAGTCCCTTCTAGCACGGCTGTAGTTCAGATGTCCTCGGGGAATAACGTGGGAGCTTTAGATCAGAAGGCCTTTGAGCAGAAGATAAATGCACATGTAAGCTCTGTTTCCCCAGATCCTGCTCATGCCGGTGGTGTGGGAACGGACAATATTAAGTCGGAAACAGATTCAAAAGTTTCATTTGCAAGAGCAATGCAAGGGAATAATTTACCATCAAGCAGTGTAAATGCAGATGAGAAACCTGTTTCTGGAAGTTTCTTGTCAAGTGAAACATCATCTAAACAAATAGGTAATCTTGAATTATCTGAACCAAACGGGACACCTTCTCAATCAAGAGCAGAACCTTCTTCTGATTTGTCAAACAAAGATGCTGATCCAAAGATTTCGACTGCAAGTGAAATCGAAGGGAATAAATTTCCATCAAGCAGTAACAATATGGATGAGAAAACTCTTTCTGGAAGTCTTCCTTCTGGGGAAAGGACATCTCAACTGAGAGATACTTCTGAATCATCTAAATCTGACAAGAGACTTTTTGAATCAAGTGCAGAACCACCTGCAGATTTATGCAACAAAGATTCTGATCCAAACATTTCAAGTGCAACAGAAACACAGGTGAATAATTTCCCATCAAGCAGTCAAAGTACGGATGAGAAACCTCTTTCTGGAAGTTTCATGTCTGGTGAAAGATCCACTAGAGAAACAGATAATCCTGAATCATCTAGATTAATTGAATCAAGCGCAGAGCCTCCTTCTGATATATCCAACAAAGATGTTGATTCAAATATTTCAAATGCAAGAGAAATGCAAGGGCTTCCAAACTGTGGAGAAGATTCTAGCTGTTCTATTAGAGATGTCCAAGATATTGCAAAAGAAAATATTTGTGAAAGTCTTGTAGTTAGCGGTGGGACACTAGAGCATACTAGACTTACCTCTGATGGCTTGCGACCTGTTGAATGGATCGGTGATTCAATTCAAGTTGTCAGTGAAAAACAATTTTACGGTTCTTGTTGTATTGATGGAGTAACATATGAGCTACAAGAACATGCTCTCTTCCAGTCTAGTGATGGCAAATTGATACCCTCTAAACTTCAGTCAATGTGGGAGGATATGAAAAGCGGGTCAAAGTGGGTTATAGTTAACACATGTTACTTTCCTAGTGACTTACCAGAGAATGTTGGTCGGCCATCTACACCTGAAAGTAATGAGGTGTACGAATCTAATCATGAAAGCACTGTAATGGCGGGCTTAATTCAAGGTCCATGTGAAGTTCTTCCTCTTGCTAAGTTCAATGAAGAAATTGAAAGACGGAGCCAATTAGGAGCTGATACAAATAATGAACTACCACCAGTTTTTCTGTGCAAATGGAATTATGATGAGTTCAAGGGGTTATTGCAGCCTGTTTCCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH PHD

Protein Analysis

925

Amino Acids

99.12

Weight (kDa)

5.52

Isoelectric Point (pI)

57.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	243 - 289	1.4e-06	PHD-finger
BAH	PF01426	694 - 797	1e-10	BAH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50620 AT3G20280 AT3G20280 AT3G20280 AT3G20280 AT3G20280
fragaria_vesca	FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 FvH4_3g23572
malus_domestica	MD03G1193000.v1.1 MD11G1209200.v1.1
prunus_persica	Prupe.4G224000_v2.0.a1 Prupe.4G224000_v2.0.a1
pyrus_communis	pycom03g14530 pycom03g14540 pycom11g18420
rosa_chinensis	RchiOBHm_Chr5g0041571
rosa_laevigata	RLG00000034083
rosa_multiflora	Rmu_sc0003051.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038930
rosa_rugosa	Rorug05G0193800 Rorug05G0193900 Rorug05G0193900
rosa_samantha	Rh5AG279500 Rh5BG283900 Rh5BG284800 Rh5CG316800 Rh5DG293600
rosa_wichuraiana	Rw5G026310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1927
Acc16I	TGCGCA	1 cut(s)	1180
Acc36I	ACCTGC	1 cut(s)	1927
AccB1I	GGYRCC	1 cut(s)	802
AccB7I	CCANNNNNTGG	2 cut(s)	917, 2186
AccII	CGCG	1 cut(s)	44
AciI	CCGC	8 cut(s)	28, 44, 147, 227, 933, 2265, 2481, 2606
AcoI	YGGCCR	4 cut(s)	29, 102, 132, 2546
AcsI	RAATTY	6 cut(s)	274, 727, 886, 954, 1203, 1778
AcuI	CTGAAG	3 cut(s)	421, 960, 2438
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	5 cut(s)	669, 720, 1336, 2008, 2576
AfiI	CCNNNNNNNGG	7 cut(s)	173, 334, 917, 1274, 1613, 2027, 2186
AflIII	ACRYGT	2 cut(s)	1459, 2507
AjnI	CCWGG	4 cut(s)	197, 245, 610, 928
AjuI	GAANNNNNNNTTGG	2 cut(s)	799, 831
Alw21I	GWGCWC	1 cut(s)	213
Alw26I	GTCTC	1 cut(s)	1885
AlwNI	CAGNNNCTG	2 cut(s)	449, 1484
Ama87I	CYCGRG	1 cut(s)	1402
AoxI	GGCC	7 cut(s)	29, 54, 102, 132, 195, 1434, 2546
ApaI	GGGCCC	1 cut(s)	58
ApeKI	GCWGC	6 cut(s)	392, 443, 446, 530, 872, 2758
ApoI	RAATTY	6 cut(s)	274, 727, 886, 954, 1203, 1778
AseI	ATTAAT	1 cut(s)	2090
Asp700I	GAANNNNTTC	2 cut(s)	1985, 2634
AspA2I	CCTAGG	1 cut(s)	14
AspLEI	GCGC	2 cut(s)	1181, 2105
AspS9I	GGNCC	7 cut(s)	54, 55, 195, 323, 788, 1324, 2621
AsuHPI	GGTGA	8 cut(s)	161, 405, 671, 939, 1226, 1990, 2057, 2339
AvaI	CYCGRG	1 cut(s)	1402
AvaII	GGWCC	4 cut(s)	323, 788, 1324, 2621
AvrII	CCTAGG	1 cut(s)	14
AxyI	CCTNAGG	1 cut(s)	231
BaeGI	GKGCMC	1 cut(s)	58
BalI	TGGCCA	1 cut(s)	134
BamHI	GGATCC	2 cut(s)	689, 1056
BanI	GGYRCC	1 cut(s)	802
BanII	GRGCYC	3 cut(s)	58, 180, 213
BarI	GAAGNNNNNNTAC	2 cut(s)	1327, 1359
BauI	CACGAG	1 cut(s)	876
BbsI	GAAGAC	2 cut(s)	693, 1820
Bbv12I	GWGCWC	1 cut(s)	213
BbvI	GCAGC	6 cut(s)	379, 433, 455, 542, 884, 2770
BceAI	ACGGC	1 cut(s)	1398
BciT130I	CCWGG	4 cut(s)	199, 247, 612, 930
BclI	TGATCA	1 cut(s)	1042
BcoDI	GTCTC	1 cut(s)	1885
BfmI	CTRYAG	3 cut(s)	1365, 1386, 1920
BfuAI	ACCTGC	1 cut(s)	1927
BisI	GCNGC	8 cut(s)	29, 227, 393, 444, 447, 531, 873, 2759
BlnI	CCTAGG	1 cut(s)	14
BlpI	GCTNAGC	1 cut(s)	1244
BlsI	GCNGC	8 cut(s)	30, 228, 394, 445, 448, 532, 874, 2760
Bme1390I	CCNGG	4 cut(s)	199, 247, 612, 930
Bme18I	GGWCC	4 cut(s)	323, 788, 1324, 2621
BmeT110I	CYCGRG	1 cut(s)	1402
BmgT120I	GGNCC	7 cut(s)	54, 55, 195, 323, 788, 1324, 2621
BmrFI	CCNGG	4 cut(s)	199, 247, 612, 930
BmrI	ACTGGG	1 cut(s)	322
BmsI	GCATC	6 cut(s)	68, 453, 1125, 1138, 1223, 1723
BmuI	ACTGGG	1 cut(s)	322
BpiI	GAAGAC	2 cut(s)	693, 1820
Bpu1102I	GCTNAGC	1 cut(s)	1244
BsaBI	GATNNNNATC	3 cut(s)	1115, 1737, 1944
BsaHI	GRCGYC	1 cut(s)	11
BsaJI	CCNNGG	7 cut(s)	14, 129, 246, 291, 457, 591, 1401
Bsc4I	CCNNNNNNNGG	7 cut(s)	173, 334, 917, 1274, 1613, 2027, 2186
Bse118I	RCCGGY	2 cut(s)	518, 1493
Bse1I	ACTGG	4 cut(s)	328, 1332, 2419, 2711
Bse21I	CCTNAGG	1 cut(s)	231
Bse3DI	GCAATG	4 cut(s)	647, 864, 1255, 1563
Bse8I	GATNNNNATC	3 cut(s)	1115, 1737, 1944
BseBI	CCWGG	4 cut(s)	199, 247, 612, 930
BseDI	CCNNGG	7 cut(s)	14, 129, 246, 291, 457, 591, 1401
BseGI	GGATG	6 cut(s)	379, 468, 742, 1045, 1810, 2017
BseJI	GATNNNNATC	3 cut(s)	1115, 1737, 1944
BseLI	CCNNNNNNNGG	7 cut(s)	173, 334, 917, 1274, 1613, 2027, 2186
BseMI	GCAATG	4 cut(s)	647, 864, 1255, 1563
BseMII	CTCAG	2 cut(s)	920, 1847
BseNI	ACTGG	4 cut(s)	328, 1332, 2419, 2711
BseRI	GAGGAG	3 cut(s)	200, 528, 855
BseSI	GKGCMC	1 cut(s)	58
BseXI	GCAGC	6 cut(s)	379, 433, 455, 542, 884, 2770
BseYI	CCCAGC	2 cut(s)	57, 643
BsgI	GTGCAG	5 cut(s)	378, 462, 558, 1210, 1929
Bsh1236I	CGCG	1 cut(s)	44
BshFI	GGCC	7 cut(s)	31, 56, 104, 134, 197, 1436, 2548
BshNI	GGYRCC	1 cut(s)	802
BsiHKAI	GWGCWC	1 cut(s)	213
BsiHKCI	CYCGRG	1 cut(s)	1402
BsiSI	CCGG	3 cut(s)	167, 519, 1494
BslFI	GGGAC	6 cut(s)	263, 309, 1310, 1355, 1696, 2284
BslI	CCNNNNNNNGG	7 cut(s)	173, 334, 917, 1274, 1613, 2027, 2186
BsmAI	GTCTC	1 cut(s)	1885
BsmFI	GGGAC	6 cut(s)	263, 309, 1310, 1355, 1696, 2284
BsnI	GGCC	7 cut(s)	31, 56, 104, 134, 197, 1436, 2548
BsoBI	CYCGRG	1 cut(s)	1402
Bsp120I	GGGCCC	1 cut(s)	54
Bsp1286I	GDGCHC	3 cut(s)	58, 180, 213
Bsp1720I	GCTNAGC	1 cut(s)	1244
Bsp19I	CCATGG	1 cut(s)	457
BspACI	CCGC	8 cut(s)	28, 44, 147, 227, 933, 2265, 2481, 2606
BspANI	GGCC	7 cut(s)	31, 56, 104, 134, 197, 1436, 2548
BspCNI	CTCAG	2 cut(s)	919, 1848
BspFNI	CGCG	1 cut(s)	44
BspHI	TCATGA	1 cut(s)	2587
BspMAI	CTGCAG	1 cut(s)	1924
BspMI	ACCTGC	1 cut(s)	1927
BspT107I	GGYRCC	1 cut(s)	802
BsrDI	GCAATG	4 cut(s)	647, 864, 1255, 1563
BsrFI	RCCGGY	2 cut(s)	518, 1493
BsrI	ACTGG	4 cut(s)	328, 1332, 2419, 2711
BssAI	RCCGGY	2 cut(s)	518, 1493
BssECI	CCNNGG	7 cut(s)	14, 129, 246, 291, 457, 591, 1401
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	1 cut(s)	876
BssT1I	CCWWGG	4 cut(s)	14, 129, 291, 457
Bst2BI	CACGAG	1 cut(s)	876
Bst2UI	CCWGG	4 cut(s)	199, 247, 612, 930
Bst6I	CTCTTC	3 cut(s)	89, 622, 2420
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	2 cut(s)	401, 1233
BstC8I	GCNNGC	4 cut(s)	117, 855, 2306, 2608
BstDEI	CTNAG	7 cut(s)	231, 360, 906, 1244, 1269, 1856, 2646
BstDSI	CCRYGG	2 cut(s)	457, 591
BstF5I	GGATG	6 cut(s)	379, 468, 742, 1045, 1810, 2017
BstFNI	CGCG	1 cut(s)	44
BstHHI	GCGC	2 cut(s)	1181, 2105
BstMAI	GTCTC	1 cut(s)	1885
BstMWI	GCNNNNNNNGC	6 cut(s)	163, 208, 401, 1104, 1113, 1233
BstNI	CCWGG	4 cut(s)	199, 247, 612, 930
BstNSI	RCATGY	5 cut(s)	1155, 1179, 1463, 2411, 2511
BstSCI	CCNGG	4 cut(s)	197, 245, 610, 928
BstSFI	CTRYAG	3 cut(s)	1365, 1386, 1920
BstSLI	GKGCMC	1 cut(s)	58
BstUI	CGCG	1 cut(s)	44
BstV1I	GCAGC	6 cut(s)	379, 433, 455, 542, 884, 2770
BstV2I	GAAGAC	2 cut(s)	693, 1820
BstX2I	RGATCY	6 cut(s)	4, 631, 689, 1056, 1480, 2051
BstYI	RGATCY	6 cut(s)	4, 631, 689, 1056, 1480, 2051
Bsu36I	CCTNAGG	1 cut(s)	231
BsuRI	GGCC	7 cut(s)	31, 56, 104, 134, 197, 1436, 2548
BtgI	CCRYGG	2 cut(s)	457, 591
BtsCI	GGATG	6 cut(s)	379, 468, 742, 1045, 1810, 2017
BtsI	GCAGTG	3 cut(s)	610, 1222, 1591
BtsIMutI	CAGTG	7 cut(s)	445, 610, 1222, 1350, 1591, 2353, 2595
BveI	ACCTGC	1 cut(s)	1927
Cac8I	GCNNGC	4 cut(s)	117, 855, 2306, 2608
CaiI	CAGNNNCTG	2 cut(s)	449, 1484
CciI	TCATGA	1 cut(s)	2587
CfoI	GCGC	2 cut(s)	1181, 2105
Cfr10I	RCCGGY	2 cut(s)	518, 1493
Cfr13I	GGNCC	7 cut(s)	54, 55, 195, 323, 788, 1324, 2621
CseI	GACGC	2 cut(s)	19, 50
Csp6I	GTAC	5 cut(s)	668, 719, 1335, 2007, 2575
CviQI	GTAC	5 cut(s)	668, 719, 1335, 2007, 2575
DdeI	CTNAG	7 cut(s)	231, 360, 906, 1244, 1269, 1856, 2646
EaeI	YGGCCR	4 cut(s)	29, 102, 132, 2546
Eam1104I	CTCTTC	3 cut(s)	89, 622, 2420
EarI	CTCTTC	3 cut(s)	89, 622, 2420
EciI	GGCGGA	1 cut(s)	948
Ecl136II	GAGCTC	1 cut(s)	211
Eco130I	CCWWGG	4 cut(s)	14, 129, 291, 457
Eco147I	AGGCCT	1 cut(s)	1436
Eco24I	GRGCYC	3 cut(s)	58, 180, 213
Eco32I	GATATC	1 cut(s)	1166
Eco47I	GGWCC	4 cut(s)	323, 788, 1324, 2621
Eco53kI	GAGCTC	1 cut(s)	211
Eco57I	CTGAAG	3 cut(s)	421, 960, 2438
Eco81I	CCTNAGG	1 cut(s)	231
Eco88I	CYCGRG	1 cut(s)	1402
EcoICRI	GAGCTC	1 cut(s)	211
EcoO109I	RGGNCCY	2 cut(s)	54, 323
EcoRI	GAATTC	2 cut(s)	886, 1203
EcoRII	CCWGG	4 cut(s)	197, 245, 610, 928
EcoRV	GATATC	1 cut(s)	1166
EcoT14I	CCWWGG	4 cut(s)	14, 129, 291, 457
EcoT22I	ATGCAT	1 cut(s)	1153
EcoT38I	GRGCYC	3 cut(s)	58, 180, 213
ErhI	CCWWGG	4 cut(s)	14, 129, 291, 457
FalI	AAGNNNNNCTT	4 cut(s)	799, 831, 1816, 1848
FaqI	GGGAC	6 cut(s)	263, 309, 1310, 1355, 1696, 2284
FauI	CCCGC	2 cut(s)	2474, 2599
FauNDI	CATATG	1 cut(s)	2392
FbaI	TGATCA	1 cut(s)	1042
Fnu4HI	GCNGC	8 cut(s)	29, 227, 393, 444, 447, 531, 873, 2759
FokI	GGATG	6 cut(s)	386, 475, 729, 1032, 1817, 2024
FriOI	GRGCYC	3 cut(s)	58, 180, 213
Fsp4HI	GCNGC	8 cut(s)	29, 227, 393, 444, 447, 531, 873, 2759
FspAI	RTGCGCAY	1 cut(s)	1180
FspI	TGCGCA	1 cut(s)	1180
GlaI	GCGC	2 cut(s)	1180, 2104
GluI	GCNGC	8 cut(s)	29, 227, 393, 444, 447, 531, 873, 2759
GsaI	CCCAGC	2 cut(s)	61, 647
HaeIII	GGCC	7 cut(s)	31, 56, 104, 134, 197, 1436, 2548
HapII	CCGG	3 cut(s)	167, 519, 1494
HgaI	GACGC	2 cut(s)	19, 50
HhaI	GCGC	2 cut(s)	1181, 2105
Hin1I	GRCGYC	1 cut(s)	11
Hin6I	GCGC	2 cut(s)	1179, 2103
HinP1I	GCGC	2 cut(s)	1179, 2103
HincII	GTYRAC	4 cut(s)	333, 486, 771, 2503
HindII	GTYRAC	4 cut(s)	333, 486, 771, 2503
HindIII	AAGCTT	1 cut(s)	433
HpaI	GTTAAC	1 cut(s)	2503
HpaII	CCGG	3 cut(s)	167, 519, 1494
HphI	GGTGA	8 cut(s)	161, 405, 671, 939, 1226, 1990, 2057, 2339
Hpy166II	GTNNAC	7 cut(s)	126, 333, 486, 771, 788, 2503, 2575
Hpy8I	GTNNAC	7 cut(s)	126, 333, 486, 771, 788, 2503, 2575
Hpy99I	CGWCG	1 cut(s)	163
HpyCH4IV	ACGT	1 cut(s)	1413
HpyF10VI	GCNNNNNNNGC	6 cut(s)	163, 208, 401, 1104, 1113, 1233
HpyF3I	CTNAG	7 cut(s)	231, 360, 906, 1244, 1269, 1856, 2646
HpySE526I	ACGT	1 cut(s)	1413
Hsp92I	GRCGYC	1 cut(s)	11
HspAI	GCGC	2 cut(s)	1179, 2103
KflI	GGGWCCC	1 cut(s)	323
Ksp22I	TGATCA	1 cut(s)	1042
KspAI	GTTAAC	1 cut(s)	2503
LmnI	GCTCC	6 cut(s)	163, 301, 763, 1418, 2673, 2684
Lsp1109I	GCAGC	6 cut(s)	379, 433, 455, 542, 884, 2770
LweI	GCATC	6 cut(s)	68, 453, 1125, 1138, 1223, 1723
MaeII	ACGT	1 cut(s)	1413
MaeIII	GTNAC	4 cut(s)	1793, 2386, 2510, 2522
MfeI	CAATTG	1 cut(s)	33
MflI	RGATCY	6 cut(s)	4, 631, 689, 1056, 1480, 2051
MhlI	GDGCHC	3 cut(s)	58, 180, 213
MlsI	TGGCCA	1 cut(s)	134
MluNI	TGGCCA	1 cut(s)	134
MlyI	GAGTC	1 cut(s)	856
MmeI	TCCRAC	4 cut(s)	785, 1073, 1503, 2151
Mox20I	TGGCCA	1 cut(s)	134
Mph1103I	ATGCAT	1 cut(s)	1153
MroXI	GAANNNNTTC	2 cut(s)	1985, 2634
MscI	TGGCCA	1 cut(s)	134
MseI	TTAA	9 cut(s)	285, 297, 425, 753, 1304, 1518, 2090, 2502, 2612
MslI	CAYNNNNRTG	2 cut(s)	1494, 2600
Msp20I	TGGCCA	1 cut(s)	134
MspA1I	CMGCKG	2 cut(s)	263, 446
MspI	CCGG	3 cut(s)	167, 519, 1494
MspR9I	CCNGG	4 cut(s)	199, 247, 612, 930
MunI	CAATTG	1 cut(s)	33
MvaI	CCWGG	4 cut(s)	199, 247, 612, 930
MvnI	CGCG	1 cut(s)	44
MwoI	GCNNNNNNNGC	6 cut(s)	163, 208, 401, 1104, 1113, 1233
NcoI	CCATGG	1 cut(s)	457
NdeI	CATATG	1 cut(s)	2392
NmeAIII	GCCGAG	2 cut(s)	130, 367
NmuCI	GTSAC	1 cut(s)	2522
NsbI	TGCGCA	1 cut(s)	1180
NsiI	ATGCAT	1 cut(s)	1153
NspI	RCATGY	5 cut(s)	1155, 1179, 1463, 2411, 2511
PagI	TCATGA	1 cut(s)	2587
PaqCI	CACCTGC	1 cut(s)	1927
PceI	AGGCCT	1 cut(s)	1436
PciI	ACATGT	2 cut(s)	1459, 2507
PcsI	WCGNNNNNNNCGW	1 cut(s)	213
PdmI	GAANNNNTTC	2 cut(s)	1985, 2634
PflMI	CCANNNNNTGG	2 cut(s)	917, 2186
PkrI	GCNGC	8 cut(s)	30, 228, 394, 445, 448, 532, 874, 2760
PleI	GAGTC	1 cut(s)	856
PpsI	GAGTC	1 cut(s)	856
PpuMI	RGGWCCY	1 cut(s)	323
PscI	ACATGT	2 cut(s)	1459, 2507
PshBI	ATTAAT	1 cut(s)	2090
Psp124BI	GAGCTC	1 cut(s)	213
Psp5II	RGGWCCY	1 cut(s)	323
Psp6I	CCWGG	4 cut(s)	197, 245, 610, 928
PspFI	CCCAGC	2 cut(s)	57, 643
PspGI	CCWGG	4 cut(s)	197, 245, 610, 928
PspOMI	GGGCCC	1 cut(s)	54
PspPI	GGNCC	7 cut(s)	54, 55, 195, 323, 788, 1324, 2621
PspPPI	RGGWCCY	1 cut(s)	323
PsrI	GAACNNNNNNTAC	2 cut(s)	1119, 1151
PstI	CTGCAG	1 cut(s)	1924
PstNI	CAGNNNCTG	2 cut(s)	449, 1484
PsuI	RGATCY	6 cut(s)	4, 631, 689, 1056, 1480, 2051
PvuII	CAGCTG	2 cut(s)	263, 446
RsaI	GTAC	5 cut(s)	669, 720, 1336, 2008, 2576
RsaNI	GTAC	5 cut(s)	668, 719, 1335, 2007, 2575
RseI	CAYNNNNRTG	2 cut(s)	1494, 2600
SacI	GAGCTC	1 cut(s)	213
SaqAI	TTAA	9 cut(s)	285, 297, 425, 753, 1304, 1518, 2090, 2502, 2612
SatI	GCNGC	8 cut(s)	29, 227, 393, 444, 447, 531, 873, 2759
Sau96I	GGNCC	7 cut(s)	54, 55, 195, 323, 788, 1324, 2621
SchI	GAGTC	1 cut(s)	856
ScrFI	CCNGG	4 cut(s)	199, 247, 612, 930
SduI	GDGCHC	3 cut(s)	58, 180, 213
SfaNI	GCATC	6 cut(s)	68, 453, 1125, 1138, 1223, 1723
SfcI	CTRYAG	3 cut(s)	1365, 1386, 1920
SinI	GGWCC	4 cut(s)	323, 788, 1324, 2621
SmiMI	CAYNNNNRTG	2 cut(s)	1494, 2600
SseBI	AGGCCT	1 cut(s)	1436
SsiI	CCGC	8 cut(s)	28, 44, 147, 227, 933, 2265, 2481, 2606
SspI	AATATT	3 cut(s)	1516, 2149, 2242
SstI	GAGCTC	1 cut(s)	213
StuI	AGGCCT	1 cut(s)	1436
StyD4I	CCNGG	4 cut(s)	197, 245, 610, 928
StyI	CCWWGG	4 cut(s)	14, 129, 291, 457
TaiI	ACGT	1 cut(s)	1416
TaqI	TCGA	5 cut(s)	142, 183, 207, 1751, 1767
TatI	WGTACW	3 cut(s)	667, 718, 1334
TauI	GCSGC	2 cut(s)	31, 229
Tru1I	TTAA	9 cut(s)	285, 297, 425, 753, 1304, 1518, 2090, 2502, 2612
Tru9I	TTAA	9 cut(s)	285, 297, 425, 753, 1304, 1518, 2090, 2502, 2612
TscAI	CASTG	7 cut(s)	445, 610, 1229, 1357, 1591, 2353, 2602
TseFI	GTSAC	1 cut(s)	2522
TseI	GCWGC	6 cut(s)	392, 443, 446, 530, 872, 2758
Tsp45I	GTSAC	1 cut(s)	2522
TspDTI	ATGAA	8 cut(s)	390, 536, 1533, 2026, 2489, 2604, 2670, 2715
TspGWI	ACGGA	4 cut(s)	176, 1523, 2024, 2686
TspRI	CASTG	7 cut(s)	445, 610, 1229, 1357, 1591, 2353, 2602
Van91I	CCANNNNNTGG	2 cut(s)	917, 2186
VpaK11BI	GGWCC	4 cut(s)	323, 788, 1324, 2621
VspI	ATTAAT	1 cut(s)	2090
XapI	RAATTY	6 cut(s)	274, 727, 886, 954, 1203, 1778
XbaI	TCTAGA	1 cut(s)	2084
XceI	RCATGY	5 cut(s)	1155, 1179, 1463, 2411, 2511
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2426
XmaJI	CCTAGG	1 cut(s)	14
XmnI	GAANNNNTTC	2 cut(s)	1985, 2634
Zsp2I	ATGCAT	1 cut(s)	1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.