Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003051.1

Orthogroup ID

OG0004984

Physical Location & Seq

Genomic Coordinates Forward (+)

20194 .. 24740

Gene Structure 4547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003051.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

atggatctggccgcagacgagccgcctagggttgagaagaggccgattcagaacggcgccggcggagaattggggccccagctgagcaagaagcccagattggggcccgattgcgagagggacttgaagagagtggcggagattgtgctggctctgtcgaccatggcgaaaattcgaggcggagagaagccgacggagccggagattgggcttatggaggaggctagggcaaagctggtggagctgtgcgaggctttgccgcccaaggagattgtggcgaaggatgcgatttcggctgtgattgaggatttggggcttaatgccaagctcaatgaacagagattagggtttcggggtcccaagttgacgattgcggagaagtttgcactcactaagaggaagatggatgaatccaagaaatacgctgcgcaaaccgctgcatatccatctcaaccattaaagacaagcttcaatgtagcagctgaaaaccatgggttgccacatactgttcgtatttcaacagataacccaaaccatgcacctatttcaactggtggtttcgcagcgtctcctcttgttcatgtttccacagtaactcctacatctgcacagtatcagttgcccaccagcgaaattagaacaactatggtttctggcagtgtgcctggtagtcatctgggaagagattcatcttccccagcatttcctagaggtgaaagagtgcaattaagaactgatggaggatccaatggatcttcttatgcatatcaagtacaagcaaattcttcggcaaatcatccaccggttagtgctccaacttggtctacacaaactcaaggtggaccagaaaacaaggtgccaaatcatacttctgtcaaggttgaaggacccgctggtatcagtaagccatcagtgactcctctagcagcacgagatcagaattctaggtcatttgcctctcaaccatcttctggacatttgcctggtggacaccagtcttcacaaaagattcgctttgttcaagcttcttcagttcctagtaatcacactgaaattgcgagaattattcagaaattattgcaaccacagctgcctgatcatcccacatggatccctccatcaagggattatatgagtaaggctttgacttgccaaacttgccagattagcatcaatgaggtagataatgttcttatttgtgatgcatgtgagaaaggatatcacattacatgtgcacaatcacctaaccagagaggaattcctcgaggtgaatggcactgctcaagatgcttgtcactaagcaatggaaagcctttgcctcctaagtatgggcgtgttatgagaagtaatatacaattaaaagctggcacggtcccttccagtacagtcgcttccagcacagtcccttccagtacggtcgcttccagcacagccccttccagtactgtcccttccagcatggctgtagttcagatgtcctcagggaataaagtgggagctttagatccaaaggtctatgagcagaagataaatgcacatgtaagctctgttttccagaatcctgctcatttggttggtgtgggcacaaacaatattaagtcggcaacagattcaaaagtttcatttgcaatgcaagggaataatttaccatccagcagtgtaaatacggatgagaaacctctttctggaagtttcctgttaagtgaaacatcatctcaacaaatagataattctgaattatctacatcggacaagagacctatggaatcaagagcagaaccttcttctgatttgtcaaacaaagatgctgatcccaagatttcaactgcaagtgaaactgaagggactaattttccatcaagcagtaaaactacggatgagaaaattctttctggaagtttccagtctggtgaaaggacttctcaacagagagatatttctgaatcatccaaatctgacaagagaccttctgaatcaagagcagaatcatccatcgctttacccaacaaagattctgatccaaatattttaagtgcaacagaaacgcaagggaataatttcccatcaagcagtcaaagtacagatgagaaacctgtttctggaagtttcatgtctagtgaaagatcctctcgagaaatagataattctgaatcatctagactatttgaatcaagcacagagcctcctgctgatttatccaacaaagatgctgattcaaaaatttcaaatgcaagagaaatgcaaggtaataattcctcaacaagcagcaagggtataaatgagaaaccgcttcctggaagtttcccgtctagcgaaagttcatctcaacaaactgataattctgaattatctatattagataagataccttatgaatcaaaaacagagcctcctgctgatttacccaatgaagatattgataagtctgttccttctcagccagtttctaactcagaagttgttgatcgagcaggagctccaaactgtggagaaaattctagctgttctattagagatgaccaaggtcttgcgcaagaaaatactagtgaaagtcttgtagtcagtggtggggcactagagcatactggatttacttctgatggcttgcgacctgttgaatggatcggtgattcaattcaagatgtcagtgaaaaaaacttctatcgttcttgtcgcattgatggagtaacatatgagttacaagaacatgctctcttccagtctggtcatggcagattgataccctctaagcttcagtcaatgtgggaggataggaaaactgggtcaaagtgggttgtagttaacagttgctactttcctagtgacttaccagagcatgttagtcgtccatctacacctgaaagtaatgaggtgtacgaatctaatcatgaaacaactgtaatggcgggcttaattcaaggtccatgtgaagttcttcctcctgctaagttcagtgaagaaattgaaagacggagccaattaggacatgatacaaataatgaactacgaccagttttcctgtgcaaatggaactatgatgagttcaaagggttattacagactgtttcccagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH PHD

Protein Analysis

1024

Amino Acids

110.17

Weight (kDa)

5.64

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50620 AT3G20280 AT3G20280 AT3G20280 AT3G20280 AT3G20280
fragaria_vesca	FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 FvH4_3g23572
malus_domestica	MD03G1193000.v1.1 MD11G1209200.v1.1
prunus_persica	Prupe.4G224000_v2.0.a1 Prupe.4G224000_v2.0.a1
pyrus_communis	pycom03g14530 pycom03g14540 pycom11g18420
rosa_chinensis	RchiOBHm_Chr5g0041571
rosa_laevigata	RLG00000034083
rosa_multiflora	Rmu_sc0003051.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038930
rosa_rugosa	Rorug05G0193800 Rorug05G0193900 Rorug05G0193900
rosa_samantha	Rh5AG279500 Rh5BG283900 Rh5BG284800 Rh5CG316800 Rh5DG293600
rosa_wichuraiana	Rw5G026310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1263
Acc16I	TGCGCA	2 cut(s)	429, 2532
AccB1I	GGYRCC	2 cut(s)	56, 856
AccB7I	CCANNNNNTGG	2 cut(s)	971, 2486
AccI	GTMKAC	2 cut(s)	158, 824
AcoI	YGGCCR	1 cut(s)	9
AcsI	RAATTY	7 cut(s)	171, 781, 940, 1257, 1884, 2220, 2494
AcuI	CTGAAG	3 cut(s)	1014, 1860, 2738
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	6 cut(s)	774, 1384, 1414, 1444, 2080, 2876
AfiI	CCNNNNNNNGG	9 cut(s)	101, 102, 206, 971, 1328, 1685, 2099, 2294, 2486
AflIII	ACRYGT	2 cut(s)	1229, 1537
AgeI	ACCGGT	1 cut(s)	802
AhlI	ACTAGT	1 cut(s)	2543
AjnI	CCWGG	3 cut(s)	664, 982, 2293
AjuI	GAANNNNNNNTTGG	4 cut(s)	83, 115, 853, 885
Alw21I	GWGCWC	3 cut(s)	814, 1237, 2479
Alw26I	GTCTC	3 cut(s)	573, 1750, 1957
Alw44I	GTGCAC	1 cut(s)	1233
Ama87I	CYCGRG	2 cut(s)	1263, 2130
AoxI	GGCC	4 cut(s)	9, 41, 74, 104
ApaI	GGGCCC	2 cut(s)	78, 108
ApaLI	GTGCAC	1 cut(s)	1233
ApeKI	GCWGC	7 cut(s)	425, 437, 479, 563, 926, 1090, 2265
ApoI	RAATTY	7 cut(s)	171, 781, 940, 1257, 1884, 2220, 2494
AsiGI	ACCGGT	1 cut(s)	802
Asp700I	GAANNNNTTC	3 cut(s)	685, 2057, 2934
AspA2I	CCTAGG	1 cut(s)	26
AspLEI	GCGC	3 cut(s)	59, 430, 2533
AspS9I	GGNCC	9 cut(s)	74, 75, 104, 105, 356, 842, 887, 1372, 2921
AsuHPI	GGTGA	5 cut(s)	725, 1233, 1280, 1922, 2639
AvaI	CYCGRG	2 cut(s)	1263, 2130
AvaII	GGWCC	5 cut(s)	356, 842, 887, 1372, 2921
AvrII	CCTAGG	1 cut(s)	26
AxyI	CCTNAGG	1 cut(s)	1480
BaeGI	GKGCMC	5 cut(s)	78, 108, 1237, 1586, 2575
BamHI	GGATCC	2 cut(s)	743, 1110
BanI	GGYRCC	2 cut(s)	56, 856
BanII	GRGCYC	3 cut(s)	78, 108, 2479
BarI	GAAGNNNNNNTAC	6 cut(s)	1375, 1405, 1407, 1435, 1437, 1467
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	990
Bbv12I	GWGCWC	3 cut(s)	814, 1237, 2479
BbvI	GCAGC	7 cut(s)	412, 424, 491, 575, 938, 1077, 2277
BceAI	ACGGC	1 cut(s)	70
BcgI	CGANNNNNNTGC	4 cut(s)	768, 802, 2825, 2859
BciT130I	CCWGG	3 cut(s)	666, 984, 2295
BclI	TGATCA	1 cut(s)	1096
BcoDI	GTCTC	3 cut(s)	573, 1750, 1957
BcuI	ACTAGT	1 cut(s)	2543
BfmI	CTRYAG	1 cut(s)	1464
BfoI	RGCGCY	1 cut(s)	60
BlnI	CCTAGG	1 cut(s)	26
BlpI	GCTNAGC	1 cut(s)	83
BmcAI	AGTACT	1 cut(s)	1444
Bme1390I	CCNGG	3 cut(s)	666, 984, 2295
Bme18I	GGWCC	5 cut(s)	356, 842, 887, 1372, 2921
BmeT110I	CYCGRG	2 cut(s)	1263, 2130
BmgT120I	GGNCC	9 cut(s)	74, 75, 104, 105, 356, 842, 887, 1372, 2921
BmrFI	CCNGG	3 cut(s)	666, 984, 2295
BmrI	ACTGGG	2 cut(s)	2790, 3064
BmsI	GCATC	6 cut(s)	274, 1179, 1192, 1277, 1795, 2197
BmuI	ACTGGG	2 cut(s)	2790, 3064
BoxI	GACNNNNGTC	2 cut(s)	994, 2523
BpiI	GAAGAC	1 cut(s)	990
Bpu1102I	GCTNAGC	1 cut(s)	83
BpuEI	CTTGAG	2 cut(s)	819, 1267
BsaBI	GATNNNNATC	3 cut(s)	1169, 1809, 2016
BsaHI	GRCGYC	1 cut(s)	57
BsaI	GGTCTC	2 cut(s)	1750, 1957
BsaJI	CCNNGG	5 cut(s)	26, 162, 264, 490, 2521
BsaWI	WCCGGW	1 cut(s)	802
BsaXI	ACNNNNNCTCC	6 cut(s)	580, 610, 2167, 2197, 2374, 2404
Bsc4I	CCNNNNNNNGG	9 cut(s)	101, 102, 206, 971, 1328, 1685, 2099, 2294, 2486
Bse118I	RCCGGY	2 cut(s)	59, 802
Bse21I	CCTNAGG	1 cut(s)	1480
Bse3DI	GCAATG	2 cut(s)	1309, 1635
Bse8I	GATNNNNATC	3 cut(s)	1169, 1809, 2016
BseBI	CCWGG	3 cut(s)	666, 984, 2295
BseDI	CCNNGG	5 cut(s)	26, 162, 264, 490, 2521
BseGI	GGATG	9 cut(s)	289, 412, 796, 1099, 1649, 1675, 1882, 1946, 1988
BseJI	GATNNNNATC	3 cut(s)	1169, 1809, 2016
BseLI	CCNNNNNNNGG	9 cut(s)	101, 102, 206, 971, 1328, 1685, 2099, 2294, 2486
BseMI	GCAATG	2 cut(s)	1309, 1635
BseMII	CTCAG	4 cut(s)	74, 1494, 2450, 2466
BseRI	GAGGAG	3 cut(s)	233, 561, 909
BseSI	GKGCMC	5 cut(s)	78, 108, 1237, 1586, 2575
BseXI	GCAGC	7 cut(s)	412, 424, 491, 575, 938, 1077, 2277
BseYI	CCCAGC	2 cut(s)	78, 697
BsgI	GTGCAG	1 cut(s)	591
Bsh1285I	CGRYCG	1 cut(s)	1419
BshFI	GGCC	4 cut(s)	11, 43, 76, 106
BshNI	GGYRCC	2 cut(s)	56, 856
BshTI	ACCGGT	1 cut(s)	802
BsiEI	CGRYCG	1 cut(s)	1419
BsiHKAI	GWGCWC	3 cut(s)	814, 1237, 2479
BsiHKCI	CYCGRG	2 cut(s)	1263, 2130
BsiSI	CCGG	3 cut(s)	60, 200, 803
BslFI	GGGAC	6 cut(s)	134, 342, 1358, 1388, 1433, 1858
BslI	CCNNNNNNNGG	9 cut(s)	101, 102, 206, 971, 1328, 1685, 2099, 2294, 2486
BsmAI	GTCTC	3 cut(s)	573, 1750, 1957
BsmBI	CGTCTC	1 cut(s)	573
BsmFI	GGGAC	6 cut(s)	134, 342, 1358, 1388, 1433, 1858
BsnI	GGCC	4 cut(s)	11, 43, 76, 106
Bso31I	GGTCTC	2 cut(s)	1750, 1957
BsoBI	CYCGRG	2 cut(s)	1263, 2130
Bsp120I	GGGCCC	2 cut(s)	74, 104
Bsp1286I	GDGCHC	7 cut(s)	78, 108, 814, 1237, 1586, 2479, 2575
Bsp1720I	GCTNAGC	1 cut(s)	83
Bsp19I	CCATGG	2 cut(s)	162, 490
BspANI	GGCC	4 cut(s)	11, 43, 76, 106
BspCNI	CTCAG	4 cut(s)	75, 1493, 2449, 2465
BspHI	TCATGA	1 cut(s)	2887
BspT107I	GGYRCC	2 cut(s)	56, 856
BspTNI	GGTCTC	2 cut(s)	1750, 1957
BsrDI	GCAATG	2 cut(s)	1309, 1635
BsrFI	RCCGGY	2 cut(s)	59, 802
BssAI	RCCGGY	2 cut(s)	59, 802
BssECI	CCNNGG	5 cut(s)	26, 162, 264, 490, 2521
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	5 cut(s)	26, 162, 264, 490, 2521
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	3 cut(s)	666, 984, 2295
Bst6I	CTCTTC	4 cut(s)	32, 122, 676, 2720
BstACI	GRCGYC	1 cut(s)	57
BstC8I	GCNNGC	5 cut(s)	61, 150, 1366, 2606, 2908
BstDEI	CTNAG	9 cut(s)	83, 393, 1298, 1323, 1480, 2436, 2452, 2748, 2946
BstDSI	CCRYGG	2 cut(s)	162, 490
BstF5I	GGATG	9 cut(s)	289, 412, 796, 1099, 1649, 1675, 1882, 1946, 1988
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	3 cut(s)	59, 430, 2533
BstMAI	GTCTC	3 cut(s)	573, 1750, 1957
BstMCI	CGRYCG	1 cut(s)	1419
BstMWI	GCNNNNNNNGC	9 cut(s)	196, 241, 284, 293, 434, 1087, 1158, 1167, 1287
BstNI	CCWGG	3 cut(s)	666, 984, 2295
BstNSI	RCATGY	5 cut(s)	1209, 1233, 1541, 2711, 2840
BstPAI	GACNNNNGTC	2 cut(s)	994, 2523
BstSCI	CCNGG	3 cut(s)	664, 982, 2293
BstSFI	CTRYAG	1 cut(s)	1464
BstSLI	GKGCMC	5 cut(s)	78, 108, 1237, 1586, 2575
BstV1I	GCAGC	7 cut(s)	412, 424, 491, 575, 938, 1077, 2277
BstV2I	GAAGAC	1 cut(s)	990
BstX2I	RGATCY	6 cut(s)	4, 743, 752, 1110, 1504, 2123
BstYI	RGATCY	6 cut(s)	4, 743, 752, 1110, 1504, 2123
Bsu36I	CCTNAGG	1 cut(s)	1480
BsuRI	GGCC	4 cut(s)	11, 43, 76, 106
BtgI	CCRYGG	2 cut(s)	162, 490
BtgZI	GCGATG	1 cut(s)	1978
BtsCI	GGATG	9 cut(s)	289, 412, 796, 1099, 1649, 1675, 1882, 1946, 1988
BtsI	GCAGTG	3 cut(s)	664, 1276, 1663
BtsIMutI	CAGTG	8 cut(s)	664, 918, 1047, 1276, 1663, 2569, 2653, 2959
Cac8I	GCNNGC	5 cut(s)	61, 150, 1366, 2606, 2908
CciI	TCATGA	1 cut(s)	2887
CfoI	GCGC	3 cut(s)	59, 430, 2533
Cfr10I	RCCGGY	2 cut(s)	59, 802
Cfr13I	GGNCC	9 cut(s)	74, 75, 104, 105, 356, 842, 887, 1372, 2921
CseI	GACGC	1 cut(s)	555
Csp6I	GTAC	6 cut(s)	773, 1383, 1413, 1443, 2079, 2875
CspAI	ACCGGT	1 cut(s)	802
CspCI	CAANNNNNGTGG	2 cut(s)	219, 254
CviQI	GTAC	6 cut(s)	773, 1383, 1413, 1443, 2079, 2875
DdeI	CTNAG	9 cut(s)	83, 393, 1298, 1323, 1480, 2436, 2452, 2748, 2946
DinI	GGCGCC	1 cut(s)	58
EaeI	YGGCCR	1 cut(s)	9
Eam1104I	CTCTTC	4 cut(s)	32, 122, 676, 2720
EarI	CTCTTC	4 cut(s)	32, 122, 676, 2720
EciI	GGCGGA	3 cut(s)	78, 152, 195
Ecl136II	GAGCTC	1 cut(s)	2477
Eco130I	CCWWGG	5 cut(s)	26, 162, 264, 490, 2521
Eco24I	GRGCYC	3 cut(s)	78, 108, 2479
Eco31I	GGTCTC	2 cut(s)	1750, 1957
Eco32I	GATATC	1 cut(s)	1220
Eco47I	GGWCC	5 cut(s)	356, 842, 887, 1372, 2921
Eco53kI	GAGCTC	1 cut(s)	2477
Eco57I	CTGAAG	3 cut(s)	1014, 1860, 2738
Eco81I	CCTNAGG	1 cut(s)	1480
Eco88I	CYCGRG	2 cut(s)	1263, 2130
EcoICRI	GAGCTC	1 cut(s)	2477
EcoO109I	RGGNCCY	5 cut(s)	74, 75, 104, 356, 887
EcoRI	GAATTC	2 cut(s)	940, 1257
EcoRII	CCWGG	3 cut(s)	664, 982, 2293
EcoRV	GATATC	1 cut(s)	1220
EcoT14I	CCWWGG	5 cut(s)	26, 162, 264, 490, 2521
EcoT22I	ATGCAT	2 cut(s)	766, 1207
EcoT38I	GRGCYC	3 cut(s)	78, 108, 2479
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	5 cut(s)	26, 162, 264, 490, 2521
Esp3I	CGTCTC	1 cut(s)	573
FalI	AAGNNNNNCTT	4 cut(s)	452, 484, 998, 1030
FaqI	GGGAC	6 cut(s)	134, 342, 1358, 1388, 1433, 1858
FauI	CCCGC	2 cut(s)	898, 2899
FauNDI	CATATG	1 cut(s)	2692
FbaI	TGATCA	1 cut(s)	1096
FblI	GTMKAC	2 cut(s)	158, 824
FokI	GGATG	9 cut(s)	296, 419, 783, 1086, 1636, 1682, 1889, 1933, 1975
FriOI	GRGCYC	3 cut(s)	78, 108, 2479
FspI	TGCGCA	2 cut(s)	429, 2532
GlaI	GCGC	3 cut(s)	58, 429, 2532
GsaI	CCCAGC	2 cut(s)	82, 701
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	4 cut(s)	11, 43, 76, 106
HapII	CCGG	3 cut(s)	60, 200, 803
HgaI	GACGC	1 cut(s)	555
HhaI	GCGC	3 cut(s)	59, 430, 2533
Hin1I	GRCGYC	1 cut(s)	57
Hin6I	GCGC	3 cut(s)	57, 428, 2531
HinP1I	GCGC	3 cut(s)	57, 428, 2531
HincII	GTYRAC	3 cut(s)	159, 366, 2803
HindII	GTYRAC	3 cut(s)	159, 366, 2803
HindIII	AAGCTT	3 cut(s)	466, 1023, 2750
HpaI	GTTAAC	1 cut(s)	2803
HpaII	CCGG	3 cut(s)	60, 200, 803
HphI	GGTGA	5 cut(s)	725, 1233, 1280, 1922, 2639
Hpy166II	GTNNAC	8 cut(s)	159, 366, 825, 842, 989, 1235, 2803, 2875
Hpy8I	GTNNAC	8 cut(s)	159, 366, 825, 842, 989, 1235, 2803, 2875
Hpy99I	CGWCG	1 cut(s)	196
HpyF10VI	GCNNNNNNNGC	9 cut(s)	196, 241, 284, 293, 434, 1087, 1158, 1167, 1287
HpyF3I	CTNAG	9 cut(s)	83, 393, 1298, 1323, 1480, 2436, 2452, 2748, 2946
Hsp92I	GRCGYC	1 cut(s)	57
HspAI	GCGC	3 cut(s)	57, 428, 2531
KasI	GGCGCC	1 cut(s)	56
KflI	GGGWCCC	1 cut(s)	356
KroI	GCCGGC	1 cut(s)	59
KroNI	GCCGGC	1 cut(s)	61
Ksp22I	TGATCA	1 cut(s)	1096
KspAI	GTTAAC	1 cut(s)	2803
LmnI	GCTCC	7 cut(s)	196, 241, 817, 1496, 2474, 2482, 2973
Lsp1109I	GCAGC	7 cut(s)	412, 424, 491, 575, 938, 1077, 2277
LweI	GCATC	6 cut(s)	274, 1179, 1192, 1277, 1795, 2197
MaeIII	GTNAC	6 cut(s)	592, 913, 1293, 2686, 2697, 2822
MflI	RGATCY	6 cut(s)	4, 743, 752, 1110, 1504, 2123
MhlI	GDGCHC	7 cut(s)	78, 108, 814, 1237, 1586, 2479, 2575
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	1 cut(s)	910
MmeI	TCCRAC	2 cut(s)	839, 2223
Mph1103I	ATGCAT	2 cut(s)	766, 1207
MreI	CGCCGGCG	1 cut(s)	59
MroNI	GCCGGC	1 cut(s)	59
MroXI	GAANNNNTTC	3 cut(s)	685, 2057, 2934
MseI	TTAA	9 cut(s)	318, 458, 728, 1358, 1596, 1700, 2030, 2802, 2912
MspA1I	CMGCKG	5 cut(s)	82, 437, 482, 893, 1090
MspI	CCGG	3 cut(s)	60, 200, 803
MspR9I	CCNGG	3 cut(s)	666, 984, 2295
MvaI	CCWGG	3 cut(s)	666, 984, 2295
MwoI	GCNNNNNNNGC	9 cut(s)	196, 241, 284, 293, 434, 1087, 1158, 1167, 1287
NaeI	GCCGGC	1 cut(s)	61
NarI	GGCGCC	1 cut(s)	57
NcoI	CCATGG	2 cut(s)	162, 490
NdeI	CATATG	1 cut(s)	2692
NgoMIV	GCCGGC	1 cut(s)	59
NmuCI	GTSAC	3 cut(s)	913, 1293, 2822
NsbI	TGCGCA	2 cut(s)	429, 2532
NsiI	ATGCAT	2 cut(s)	766, 1207
NspI	RCATGY	5 cut(s)	1209, 1233, 1541, 2711, 2840
PaeR7I	CTCGAG	2 cut(s)	1263, 2130
PagI	TCATGA	1 cut(s)	2887
PciI	ACATGT	2 cut(s)	1229, 1537
PcsI	WCGNNNNNNNCGW	1 cut(s)	164
PdiI	GCCGGC	1 cut(s)	61
PdmI	GAANNNNTTC	3 cut(s)	685, 2057, 2934
PflMI	CCANNNNNTGG	2 cut(s)	971, 2486
PfoI	TCCNGGA	1 cut(s)	2293
PinAI	ACCGGT	1 cut(s)	802
PleI	GAGTC	1 cut(s)	910
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	1 cut(s)	910
PpuMI	RGGWCCY	2 cut(s)	356, 887
PscI	ACATGT	2 cut(s)	1229, 1537
PshAI	GACNNNNGTC	2 cut(s)	994, 2523
Psp124BI	GAGCTC	1 cut(s)	2479
Psp5II	RGGWCCY	2 cut(s)	356, 887
Psp6I	CCWGG	3 cut(s)	664, 982, 2293
PspFI	CCCAGC	2 cut(s)	78, 697
PspGI	CCWGG	3 cut(s)	664, 982, 2293
PspOMI	GGGCCC	2 cut(s)	74, 104
PspPI	GGNCC	9 cut(s)	74, 75, 104, 105, 356, 842, 887, 1372, 2921
PspPPI	RGGWCCY	2 cut(s)	356, 887
PspXI	VCTCGAGB	1 cut(s)	1263
PsrI	GAACNNNNNNTAC	2 cut(s)	1173, 1205
PsuI	RGATCY	6 cut(s)	4, 743, 752, 1110, 1504, 2123
PvuII	CAGCTG	3 cut(s)	82, 482, 1090
RsaI	GTAC	6 cut(s)	774, 1384, 1414, 1444, 2080, 2876
RsaNI	GTAC	6 cut(s)	773, 1383, 1413, 1443, 2079, 2875
SacI	GAGCTC	1 cut(s)	2479
SalI	GTCGAC	1 cut(s)	157
SaqAI	TTAA	9 cut(s)	318, 458, 728, 1358, 1596, 1700, 2030, 2802, 2912
Sau96I	GGNCC	9 cut(s)	74, 75, 104, 105, 356, 842, 887, 1372, 2921
ScaI	AGTACT	1 cut(s)	1444
SchI	GAGTC	1 cut(s)	910
ScrFI	CCNGG	3 cut(s)	666, 984, 2295
SduI	GDGCHC	7 cut(s)	78, 108, 814, 1237, 1586, 2479, 2575
SfaNI	GCATC	6 cut(s)	274, 1179, 1192, 1277, 1795, 2197
SfcI	CTRYAG	1 cut(s)	1464
SfoI	GGCGCC	1 cut(s)	58
Sfr274I	CTCGAG	2 cut(s)	1263, 2130
SgrAI	CRCCGGYG	1 cut(s)	59
SinI	GGWCC	5 cut(s)	356, 842, 887, 1372, 2921
SlaI	CTCGAG	2 cut(s)	1263, 2130
SmlI	CTYRAG	4 cut(s)	834, 1263, 1282, 2130
SmoI	CTYRAG	4 cut(s)	834, 1263, 1282, 2130
SpeI	ACTAGT	1 cut(s)	2543
SspDI	GGCGCC	1 cut(s)	56
SspI	AATATT	2 cut(s)	1594, 2026
SstI	GAGCTC	1 cut(s)	2479
StyD4I	CCNGG	3 cut(s)	664, 982, 2293
StyI	CCWWGG	5 cut(s)	26, 162, 264, 490, 2521
TaqI	TCGA	5 cut(s)	158, 175, 1264, 2131, 2467
TatI	WGTACW	4 cut(s)	772, 1382, 1442, 2078
TauI	GCSGC	3 cut(s)	14, 25, 262
Tru1I	TTAA	9 cut(s)	318, 458, 728, 1358, 1596, 1700, 2030, 2802, 2912
Tru9I	TTAA	9 cut(s)	318, 458, 728, 1358, 1596, 1700, 2030, 2802, 2912
TscAI	CASTG	8 cut(s)	664, 918, 1054, 1283, 1663, 2569, 2653, 2959
TseFI	GTSAC	3 cut(s)	913, 1293, 2822
TseI	GCWGC	7 cut(s)	425, 437, 479, 563, 926, 1090, 2265
Tsp45I	GTSAC	3 cut(s)	913, 1293, 2822
TspGWI	ACGGA	4 cut(s)	209, 1682, 1889, 2986
TspRI	CASTG	8 cut(s)	664, 918, 1054, 1283, 1663, 2569, 2653, 2959
Van91I	CCANNNNNTGG	2 cut(s)	971, 2486
VneI	GTGCAC	1 cut(s)	1233
VpaK11BI	GGWCC	5 cut(s)	356, 842, 887, 1372, 2921
XapI	RAATTY	7 cut(s)	171, 781, 940, 1257, 1884, 2220, 2494
XbaI	TCTAGA	1 cut(s)	2156
XceI	RCATGY	5 cut(s)	1209, 1233, 1541, 2711, 2840
XcmI	CCANNNNNNNNNTGG	2 cut(s)	271, 2726
XhoI	CTCGAG	2 cut(s)	1263, 2130
XmaJI	CCTAGG	1 cut(s)	26
XmiI	GTMKAC	2 cut(s)	158, 824
XmnI	GAANNNNTTC	3 cut(s)	685, 2057, 2934
ZrmI	AGTACT	1 cut(s)	1444
Zsp2I	ATGCAT	2 cut(s)	766, 1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.