Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0004984

Physical Location & Seq

Genomic Coordinates Forward (+)

26535598 .. 26541894

Gene Structure 6297 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1193000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGGATCCACCCCTGAACGCCGAGCCCACTCAGCCGCCCCCGCCGGAGGTCTCAATTGGGGAAAAGAGGCCGATTGAGAATGGAGGACAAGGAGAATTGGGGACCCAGTTGAACAAGAAGCCCAGATTGGGACCCAATTCGGAGAAGGATCTGAGGAGAGTGGCGGAGATTGTGCTGGCCTTGTCAACCATGGCCAAGATTCGAGGGGGGAAGAAGCCCACGGAGCCGGAGATTGGGCTTATGGGGGAAGCTAGGTCGAAGCTGGTGGAGCTGTGTGAAGGTTTGGCGCCTAAGGATATAGTGGGCAGGGATGCAATTGGCGCTGTGATTGAGGATTTGGGGCTTAATGCTAAGCTTAAGGAGCAGAGATTAGGGTTCCGGGGTCCCAAGTTGACGATTGCCGAGAAGTTTTCGCAGACGAAGAGGAAGATGGAAGAATCCAAGAAATTCTCTGCACAAGCTCAACCTGCTGCACATCCATCTCTCCCATTAAAAACAAGCTTAAATGCAGCGGCTGAAACCCATGGGATGCCACATAACGTTCATATGATTCCTACAAGCAAACCAAGTCATGCACCAATTTCCTCAGGAGGTTTCCCTGTTTCTCCATCTCTTTTTCATGCATCTACGGCAACTCCCGCACCTACACAGTATCAGTTTCCCAACAATGATGTTAGAGCATCCATGGTGTCTAGTGGTTTTCCTAGCAGTCATCTAGGAAGGGATTCTTCTTCCCCAAATGTGCCTAAAGTTGAAAGAGCACAGTTCAGATCAGATGGAGGACCAAATGCAAATGTGTCTTCTTATGCATTTCAAGTACAAGCAACTTCATTTGCAAATCATCCACATCCACCAGTGAATGCTCCAGCTTGGTCAGTGCAAGCTCAATCTGCTAAAAGTGGACCAGAACACAAGGTGCCAAACTATACACCTGTCAAAGTTGACGGAAGTACTGGTATCAGTATGCAACAGATGACTCCTGTAGCTGCGCGGAATCAGAATACTAAACCATTTGTCTCTCAATCAGCTTCTGGAAATCTACCCGTTGTACATCAGCCTTTGCAACAGATGCACTTCGTTAAAACTCCCTCGCTTTCTAATAATCACAATGAAATTGCAAAAGTTATTCAGAAATTATTACAACCACAGCTTCCTGATCATCCTCCATGGATTCCTCCATCAAGGGATTACATGAGTAAGACTTTGACTTGCCAGAGTTGCCAGCTTACGATCAATGAGGTGGATAATGTTCTTATTTGTGATGCGTGTGAGAGAGGATATCACATAATGTGTGCACAGTCATCTAACCAGAGAGGAATTCCTAGAGGTGAGTGGCACTGCATGAGATGCCTGTCACTGAGCAATGGAAAGCCTTTGCCTCCGAAGTATGGACGTGTGATGAGAAGTAATATACAAGTAAAAGTCCCTTCTAACACAGCTGGAGTTCAAACGTCCTCAGAGAATAAACTGGAAAATTTAGATCCAAAGGTCAACCAGCCGAAGATAGCTGCAAATGGAAGTTCTGTTTTGCAGAATACTGCTGGTATAGGTGGTGGGGGCAGCAATCACATTGAGTCAGCACCAGATCTAAGGATTTTAACTGCAAAAGAATCTCAACGGAAGAATCTCGTATCAAGCAGTAAAAATATGGATGAGAAACCTCTTTCTGGAAGTTACCCGTTAAGTGAAAGATCTGAGGAGAAATGTTCTGAATCAAAATCAGACCCTCCTTCTGAACCAAAAGAAACTACTGAATCATCTAGAGTTGAAGATTCTGAATCAATTGCAGAATCTCCTGCTGAGTCAAAAGTGGAGCATCCTGCTGAATCAAAAGCGGAGCATCCTGCTGAATCAAAAGTAGAGCCTCCTCTTGAACCAAAAGAAACTACTGAATCATCTGGAGTTGAAGAGAGACCTTCTGAATCAAAAGCAGAACCTGCTGCTGAATCAAAAGCGGAGTGCCCTGCTGAATCAAAAGCGGAGCCTCCTGCTGAACCAAAAGAAACTACTGGATCATTTAGTGTTGAAGAGATACCTGGATCAAAAGCAGAACCTCCTTCTGAATCAAAAGTGGAGCTTCCTGCTGAATCAAAAACAGATCCTCTTGCTGAACCAAAAGAAACTACTGAATCATCTAGAGTTGAAGAGAGACCTTCTGATTCAAAAGCAGAGCGTCCTGTTGAACCAAAAGAAACTACTGAATCATCTAGAGTTGAAGAGATACATTTTGAATCAAAACCAGAAGCTTCTGCTGAATTTTCCAACAAAGATACTGATAAGTCCAATCATTCCCAACCCCCTTCCAACACACAAGTTGTGGACGGTGCTGGGCTGCCCAACTCTTCAGAAGTTCCATCAATGATATTCCATGACCAGAATTCTGCATTGGAAGACCCAGATGCTTCTCACTCTGTAGGAAACTCTGGCTCCTCTTTGAGATATGACATCAAACAAAATGACCAAAGTGGTGCACAAGCAAATACTTGTGAAATTTCTGTAGTTAGTGGTAGGTCTCTAGAGCATTTCGGTTTTTTTTCAGATGGCTTGAAAGCTGTTAAATGGATTGGCGATGCAGTTCAAGGTGGTGATGAAAAAATATATTATCATACTTGTTGCATTGATGGGGTAACTTATCAACTGCGAGATCATGCCCTTTTCCAGTCTAGTCATGGAAAATTGATACCCTCGAAGCTTCAGTCCATGTGGGAGGATAGAAAAACTGGGTCAAAGTGGGCTATTGTCAACAGGTGCTACTTTCCTGGTGACTTACCAGAGAACGTTGGTCGCCCATCTACACCTGAAAGCAATGAGGTCTATGAGTCTAATCATGATAGCAATGTAATGGCTGGTTTGATTCGTGGTCCTTGTGAAGTTCTTTCTCCTGCTAAGTTCAGTGTAGAAACTGAAAGACGGAGCCAGTTAGGACATGAGGCAAATAATGAATTACAACCACTCTTCCTGTGCAAATGGATTTATGATGAGTTTAAAGGGGTATTGGAGCCTGTTCCCGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH PHD

Protein Analysis

1005

Amino Acids

108.84

Weight (kDa)

5.73

Isoelectric Point (pI)

58.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7797	PF25073	38 - 94	6e-23	Domain of unknown function (DUF7797)
BAH	PF01426	897 - 1003	1.4e-09	BAH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50620 AT3G20280 AT3G20280 AT3G20280 AT3G20280 AT3G20280
fragaria_vesca	FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 FvH4_3g23572
malus_domestica	MD03G1193000.v1.1 MD11G1209200.v1.1
prunus_persica	Prupe.4G224000_v2.0.a1 Prupe.4G224000_v2.0.a1
pyrus_communis	pycom03g14530 pycom03g14540 pycom11g18420
rosa_chinensis	RchiOBHm_Chr5g0041571
rosa_laevigata	RLG00000034083
rosa_multiflora	Rmu_sc0003051.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038930
rosa_rugosa	Rorug05G0193800 Rorug05G0193900 Rorug05G0193900
rosa_samantha	Rh5AG279500 Rh5BG283900 Rh5BG284800 Rh5CG316800 Rh5DG293600
rosa_wichuraiana	Rw5G026310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	475, 1945
AccB1I	GGYRCC	2 cut(s)	286, 916
AccII	CGCG	1 cut(s)	991
AciI	CCGC	9 cut(s)	35, 41, 164, 512, 639, 991, 1835, 1955, 1979
AclI	AACGTT	2 cut(s)	540, 2778
AclWI	GGATC	6 cut(s)	12, 156, 1475, 2020, 2047, 2093
AcoI	YGGCCR	1 cut(s)	192
AcsI	RAATTY	6 cut(s)	446, 1317, 1474, 2255, 2377, 2490
AcuI	CTGAAG	2 cut(s)	2328, 2678
AcyI	GRCGYC	1 cut(s)	287
AdeI	CACNNNGTG	1 cut(s)	916
AfaI	GTAC	3 cut(s)	819, 952, 1050
AfiI	CCNNNNNNNGG	5 cut(s)	46, 128, 233, 1388, 1667
AflII	CTTAAG	1 cut(s)	356
AflIII	ACRYGT	1 cut(s)	1393
AjiI	CACGTC	1 cut(s)	1394
AjnI	CCWGG	2 cut(s)	2035, 2758
AjuI	GAANNNNNNNTTGG	4 cut(s)	110, 142, 2369, 2401
Alw21I	GWGCWC	3 cut(s)	763, 1297, 2473
Alw26I	GTCTC	5 cut(s)	55, 1021, 1906, 2143, 2517
Alw44I	GTGCAC	2 cut(s)	1293, 2469
AlwI	GGATC	6 cut(s)	12, 156, 1475, 2020, 2047, 2093
AlwNI	CAGNNNCTG	3 cut(s)	515, 1031, 1937
Ama87I	CYCGRG	1 cut(s)	3008
AoxI	GGCC	3 cut(s)	68, 177, 192
ApaLI	GTGCAC	2 cut(s)	1293, 2469
ApeKI	GCWGC	7 cut(s)	470, 509, 986, 1508, 1560, 1940, 2332
ApoI	RAATTY	6 cut(s)	446, 1317, 1474, 2255, 2377, 2490
ArsI	GACNNNNNNTTYG	2 cut(s)	2681, 2713
Asp700I	GAANNNNTTC	1 cut(s)	724
AspLEI	GCGC	3 cut(s)	289, 323, 991
AspS9I	GGNCC	6 cut(s)	102, 131, 383, 782, 902, 2861
AsuC2I	CCSGG	1 cut(s)	380
AsuHPI	GGTGA	3 cut(s)	1340, 2597, 2774
AvaI	CYCGRG	1 cut(s)	3008
AvaII	GGWCC	6 cut(s)	102, 131, 383, 782, 902, 2861
AxyI	CCTNAGG	2 cut(s)	291, 586
BaeGI	GKGCMC	3 cut(s)	1297, 1964, 2473
BalI	TGGCCA	1 cut(s)	194
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	2 cut(s)	286, 916
BanII	GRGCYC	1 cut(s)	27
BbsI	GAAGAC	2 cut(s)	792, 2397
Bbv12I	GWGCWC	3 cut(s)	763, 1297, 2473
BbvI	GCAGC	7 cut(s)	457, 521, 973, 1495, 1572, 1927, 2319
BccI	CCATC	9 cut(s)	424, 487, 616, 770, 1186, 2362, 2534, 2615, 2797
BceAI	ACGGC	1 cut(s)	645
BciT130I	CCWGG	2 cut(s)	2037, 2760
BclI	TGATCA	1 cut(s)	1156
BcnI	CCSGG	1 cut(s)	380
BcoDI	GTCTC	5 cut(s)	55, 1021, 1906, 2143, 2517
BfmI	CTRYAG	3 cut(s)	981, 2412, 2496
BfoI	RGCGCY	2 cut(s)	290, 324
BfrI	CTTAAG	1 cut(s)	356
BfuAI	ACCTGC	2 cut(s)	475, 1945
BglII	AGATCT	2 cut(s)	1585, 1691
BisI	GCNGC	9 cut(s)	35, 471, 510, 513, 987, 1509, 1561, 1941, 2333
BlpI	GCTNAGC	1 cut(s)	351
BlsI	GCNGC	9 cut(s)	36, 472, 511, 514, 988, 1510, 1562, 1942, 2334
BmcAI	AGTACT	1 cut(s)	952
Bme1390I	CCNGG	3 cut(s)	380, 2037, 2760
Bme18I	GGWCC	6 cut(s)	102, 131, 383, 782, 902, 2861
BmeT110I	CYCGRG	1 cut(s)	3008
BmgBI	CACGTC	1 cut(s)	1394
BmgT120I	GGNCC	6 cut(s)	102, 131, 383, 782, 902, 2861
BmrFI	CCNGG	3 cut(s)	380, 2037, 2760
BmrI	ACTGGG	2 cut(s)	100, 2730
BmuI	ACTGGG	2 cut(s)	100, 2730
BpiI	GAAGAC	2 cut(s)	792, 2397
BpmI	CTGGAG	3 cut(s)	849, 1461, 1920
Bpu1102I	GCTNAGC	1 cut(s)	351
BpuMI	CCSGG	1 cut(s)	380
BsaHI	GRCGYC	1 cut(s)	287
BsaI	GGTCTC	4 cut(s)	55, 1906, 2143, 2517
BsaJI	CCNNGG	6 cut(s)	189, 219, 379, 523, 684, 1166
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 2411, 2441
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 128, 233, 1388, 1667
Bse1I	ACTGG	8 cut(s)	106, 854, 958, 1473, 2014, 2659, 2725, 2917
Bse21I	CCTNAGG	2 cut(s)	291, 586
Bse3DI	GCAATG	3 cut(s)	1369, 2812, 2842
BseBI	CCWGG	2 cut(s)	2037, 2760
BseDI	CCNNGG	6 cut(s)	189, 219, 379, 523, 684, 1166
BseLI	CCNNNNNNNGG	5 cut(s)	46, 128, 233, 1388, 1667
BseMI	GCAATG	3 cut(s)	1369, 2812, 2842
BseMII	CTCAG	7 cut(s)	44, 143, 600, 1349, 1470, 1686, 1791
BseNI	ACTGG	8 cut(s)	106, 854, 958, 1473, 2014, 2659, 2725, 2917
BseRI	GAGGAG	4 cut(s)	169, 1712, 1857, 2419
BseSI	GKGCMC	3 cut(s)	1297, 1964, 2473
BseXI	GCAGC	7 cut(s)	457, 521, 973, 1495, 1572, 1927, 2319
BseYI	CCCAGC	1 cut(s)	2327
BsgI	GTGCAG	2 cut(s)	438, 456
Bsh1236I	CGCG	1 cut(s)	991
BshFI	GGCC	3 cut(s)	70, 179, 194
BshNI	GGYRCC	2 cut(s)	286, 916
BsiHKAI	GWGCWC	3 cut(s)	763, 1297, 2473
BsiHKCI	CYCGRG	1 cut(s)	3008
BsiSI	CCGG	3 cut(s)	44, 227, 379
BslFI	GGGAC	4 cut(s)	115, 144, 369, 1409
BslI	CCNNNNNNNGG	5 cut(s)	46, 128, 233, 1388, 1667
BsmAI	GTCTC	5 cut(s)	55, 1021, 1906, 2143, 2517
BsmFI	GGGAC	4 cut(s)	115, 144, 369, 1409
BsmI	GAATGC	1 cut(s)	865
BsnI	GGCC	3 cut(s)	70, 179, 194
Bso31I	GGTCTC	4 cut(s)	55, 1906, 2143, 2517
BsoBI	CYCGRG	1 cut(s)	3008
Bsp1286I	GDGCHC	5 cut(s)	27, 763, 1297, 1964, 2473
Bsp1407I	TGTACA	1 cut(s)	1048
Bsp1720I	GCTNAGC	1 cut(s)	351
Bsp19I	CCATGG	4 cut(s)	189, 523, 684, 1166
BspACI	CCGC	9 cut(s)	35, 41, 164, 512, 639, 991, 1835, 1955, 1979
BspANI	GGCC	3 cut(s)	70, 179, 194
BspCNI	CTCAG	7 cut(s)	43, 144, 599, 1350, 1469, 1687, 1792
BspFNI	CGCG	1 cut(s)	991
BspHI	TCATGA	1 cut(s)	2827
BspMI	ACCTGC	2 cut(s)	475, 1945
BspPI	GGATC	6 cut(s)	12, 156, 1475, 2020, 2047, 2093
BspT107I	GGYRCC	2 cut(s)	286, 916
BspTI	CTTAAG	1 cut(s)	356
BspTNI	GGTCTC	4 cut(s)	55, 1906, 2143, 2517
BsrDI	GCAATG	3 cut(s)	1369, 2812, 2842
BsrGI	TGTACA	1 cut(s)	1048
BsrI	ACTGG	8 cut(s)	106, 854, 958, 1473, 2014, 2659, 2725, 2917
BssECI	CCNNGG	6 cut(s)	189, 219, 379, 523, 684, 1166
BssNI	GRCGYC	1 cut(s)	287
BssT1I	CCWWGG	4 cut(s)	189, 523, 684, 1166
Bst2UI	CCWGG	2 cut(s)	2037, 2760
Bst4CI	ACNGT	4 cut(s)	651, 765, 1299, 2324
Bst6I	CTCTTC	7 cut(s)	416, 1902, 2022, 2139, 2211, 2347, 2960
BstACI	GRCGYC	1 cut(s)	287
BstAFI	CTTAAG	1 cut(s)	356
BstAPI	GCANNNNNTGC	3 cut(s)	1069, 1347, 1937
BstAUI	TGTACA	1 cut(s)	1048
BstC8I	GCNNGC	3 cut(s)	177, 882, 1223
BstDSI	CCRYGG	5 cut(s)	189, 219, 523, 684, 1166
BstFNI	CGCG	1 cut(s)	991
BstH2I	RGCGCY	2 cut(s)	290, 324
BstHHI	GCGC	3 cut(s)	289, 323, 991
BstMAI	GTCTC	5 cut(s)	55, 1021, 1906, 2143, 2517
BstNI	CCWGG	2 cut(s)	2037, 2760
BstSCI	CCNGG	3 cut(s)	378, 2035, 2758
BstSFI	CTRYAG	3 cut(s)	981, 2412, 2496
BstSLI	GKGCMC	3 cut(s)	1297, 1964, 2473
BstUI	CGCG	1 cut(s)	991
BstV1I	GCAGC	7 cut(s)	457, 521, 973, 1495, 1572, 1927, 2319
BstV2I	GAAGAC	2 cut(s)	792, 2397
BstX2I	RGATCY	6 cut(s)	4, 148, 1480, 1585, 1691, 2098
BstYI	RGATCY	6 cut(s)	4, 148, 1480, 1585, 1691, 2098
Bsu36I	CCTNAGG	2 cut(s)	291, 586
BsuRI	GGCC	3 cut(s)	70, 179, 194
BtgI	CCRYGG	5 cut(s)	189, 219, 523, 684, 1166
BtgZI	GCGATG	1 cut(s)	2583
BtrI	CACGTC	1 cut(s)	1394
BtsI	GCAGTG	1 cut(s)	1336
BtsIMutI	CAGTG	5 cut(s)	861, 882, 1336, 1355, 2899
BveI	ACCTGC	2 cut(s)	475, 1945
Cac8I	GCNNGC	3 cut(s)	177, 882, 1223
CaiI	CAGNNNCTG	3 cut(s)	515, 1031, 1937
CciI	TCATGA	1 cut(s)	2827
CfoI	GCGC	3 cut(s)	289, 323, 991
Cfr13I	GGNCC	6 cut(s)	102, 131, 383, 782, 902, 2861
CseI	GACGC	1 cut(s)	2162
Csp6I	GTAC	3 cut(s)	818, 951, 1049
CviQI	GTAC	3 cut(s)	818, 951, 1049
DinI	GGCGCC	1 cut(s)	288
DraI	TTTAAA	1 cut(s)	2986
DraIII	CACNNNGTG	1 cut(s)	916
EaeI	YGGCCR	1 cut(s)	192
Eam1104I	CTCTTC	7 cut(s)	416, 1902, 2022, 2139, 2211, 2347, 2960
EarI	CTCTTC	7 cut(s)	416, 1902, 2022, 2139, 2211, 2347, 2960
EciI	GGCGGA	1 cut(s)	179
Eco130I	CCWWGG	4 cut(s)	189, 523, 684, 1166
Eco24I	GRGCYC	1 cut(s)	27
Eco31I	GGTCTC	4 cut(s)	55, 1906, 2143, 2517
Eco32I	GATATC	1 cut(s)	1280
Eco47I	GGWCC	6 cut(s)	102, 131, 383, 782, 902, 2861
Eco57I	CTGAAG	2 cut(s)	2328, 2678
Eco81I	CCTNAGG	2 cut(s)	291, 586
Eco88I	CYCGRG	1 cut(s)	3008
EcoO109I	RGGNCCY	3 cut(s)	102, 131, 383
EcoRI	GAATTC	2 cut(s)	1317, 2377
EcoRII	CCWGG	2 cut(s)	2035, 2758
EcoRV	GATATC	1 cut(s)	1280
EcoT14I	CCWWGG	4 cut(s)	189, 523, 684, 1166
EcoT22I	ATGCAT	2 cut(s)	625, 811
EcoT38I	GRGCYC	1 cut(s)	27
EgeI	GGCGCC	1 cut(s)	288
EheI	GGCGCC	1 cut(s)	288
ErhI	CCWWGG	4 cut(s)	189, 523, 684, 1166
FalI	AAGNNNNNCTT	4 cut(s)	712, 744, 2061, 2093
FaqI	GGGAC	4 cut(s)	115, 144, 369, 1409
FauI	CCCGC	2 cut(s)	48, 646
FauNDI	CATATG	1 cut(s)	546
FbaI	TGATCA	1 cut(s)	1156
Fnu4HI	GCNGC	9 cut(s)	35, 471, 510, 513, 987, 1509, 1561, 1941, 2333
FriOI	GRGCYC	1 cut(s)	27
Fsp4HI	GCNGC	9 cut(s)	35, 471, 510, 513, 987, 1509, 1561, 1941, 2333
GlaI	GCGC	3 cut(s)	288, 322, 990
GluI	GCNGC	9 cut(s)	35, 471, 510, 513, 987, 1509, 1561, 1941, 2333
GsaI	CCCAGC	1 cut(s)	2331
GsuI	CTGGAG	3 cut(s)	849, 1461, 1920
HaeII	RGCGCY	2 cut(s)	290, 324
HaeIII	GGCC	3 cut(s)	70, 179, 194
HapII	CCGG	3 cut(s)	44, 227, 379
HgaI	GACGC	1 cut(s)	2162
HhaI	GCGC	3 cut(s)	289, 323, 991
Hin1I	GRCGYC	1 cut(s)	287
Hin6I	GCGC	3 cut(s)	287, 321, 989
HinP1I	GCGC	3 cut(s)	287, 321, 989
HincII	GTYRAC	5 cut(s)	186, 393, 943, 1492, 2743
HindII	GTYRAC	5 cut(s)	186, 393, 943, 1492, 2743
HindIII	AAGCTT	4 cut(s)	353, 499, 2244, 2690
HpaII	CCGG	3 cut(s)	44, 227, 379
HphI	GGTGA	3 cut(s)	1340, 2597, 2774
Hpy166II	GTNNAC	9 cut(s)	186, 393, 902, 943, 1295, 1492, 2320, 2471, 2743
Hpy8I	GTNNAC	9 cut(s)	186, 393, 902, 943, 1295, 1492, 2320, 2471, 2743
HpyAV	CCTTC	9 cut(s)	139, 272, 714, 1437, 1740, 1926, 2067, 2163, 2310
HpyCH4III	ACNGT	4 cut(s)	651, 765, 1299, 2324
HpyCH4IV	ACGT	4 cut(s)	540, 1393, 1451, 2778
HpySE526I	ACGT	4 cut(s)	540, 1393, 1451, 2778
Hsp92I	GRCGYC	1 cut(s)	287
HspAI	GCGC	3 cut(s)	287, 321, 989
KasI	GGCGCC	1 cut(s)	286
KflI	GGGWCCC	3 cut(s)	102, 131, 383
Ksp22I	TGATCA	1 cut(s)	1156
Lsp1109I	GCAGC	7 cut(s)	457, 521, 973, 1495, 1572, 1927, 2319
MaeII	ACGT	4 cut(s)	540, 1393, 1451, 2778
MaeIII	GTNAC	4 cut(s)	1353, 1673, 2626, 2762
MfeI	CAATTG	3 cut(s)	54, 315, 1782
MflI	RGATCY	6 cut(s)	4, 148, 1480, 1585, 1691, 2098
MhlI	GDGCHC	5 cut(s)	27, 763, 1297, 1964, 2473
MlsI	TGGCCA	1 cut(s)	194
MluNI	TGGCCA	1 cut(s)	194
Mly113I	GGCGCC	1 cut(s)	287
MlyI	GAGTC	4 cut(s)	970, 1583, 1811, 2828
MmeI	TCCRAC	2 cut(s)	2286, 2328
Mox20I	TGGCCA	1 cut(s)	194
Mph1103I	ATGCAT	2 cut(s)	625, 811
MroXI	GAANNNNTTC	1 cut(s)	724
MscI	TGGCCA	1 cut(s)	194
MseI	TTAA	9 cut(s)	345, 357, 491, 503, 1080, 1598, 1682, 2556, 2985
Msp20I	TGGCCA	1 cut(s)	194
MspA1I	CMGCKG	2 cut(s)	512, 1439
MspCI	CTTAAG	1 cut(s)	356
MspI	CCGG	3 cut(s)	44, 227, 379
MspR9I	CCNGG	3 cut(s)	380, 2037, 2760
MunI	CAATTG	3 cut(s)	54, 315, 1782
Mva1269I	GAATGC	1 cut(s)	865
MvaI	CCWGG	2 cut(s)	2037, 2760
MvnI	CGCG	1 cut(s)	991
NarI	GGCGCC	1 cut(s)	287
NciI	CCSGG	1 cut(s)	380
NcoI	CCATGG	4 cut(s)	189, 523, 684, 1166
NdeI	CATATG	1 cut(s)	546
NmeAIII	GCCGAG	2 cut(s)	46, 427
NmuCI	GTSAC	2 cut(s)	1353, 2762
NsiI	ATGCAT	2 cut(s)	625, 811
PagI	TCATGA	1 cut(s)	2827
PctI	GAATGC	1 cut(s)	865
PdmI	GAANNNNTTC	1 cut(s)	724
PkrI	GCNGC	9 cut(s)	36, 472, 511, 514, 988, 1510, 1562, 1942, 2334
PleI	GAGTC	4 cut(s)	970, 1582, 1810, 2827
PluTI	GGCGCC	1 cut(s)	290
PpsI	GAGTC	4 cut(s)	970, 1582, 1810, 2827
PpuMI	RGGWCCY	3 cut(s)	102, 131, 383
Psp1406I	AACGTT	2 cut(s)	540, 2778
Psp5II	RGGWCCY	3 cut(s)	102, 131, 383
Psp6I	CCWGG	2 cut(s)	2035, 2758
PspFI	CCCAGC	1 cut(s)	2327
PspGI	CCWGG	2 cut(s)	2035, 2758
PspPI	GGNCC	6 cut(s)	102, 131, 383, 782, 902, 2861
PspPPI	RGGWCCY	3 cut(s)	102, 131, 383
PstNI	CAGNNNCTG	3 cut(s)	515, 1031, 1937
PsuI	RGATCY	6 cut(s)	4, 148, 1480, 1585, 1691, 2098
PvuII	CAGCTG	1 cut(s)	1439
RsaI	GTAC	3 cut(s)	819, 952, 1050
RsaNI	GTAC	3 cut(s)	818, 951, 1049
SaqAI	TTAA	9 cut(s)	345, 357, 491, 503, 1080, 1598, 1682, 2556, 2985
SatI	GCNGC	9 cut(s)	35, 471, 510, 513, 987, 1509, 1561, 1941, 2333
Sau96I	GGNCC	6 cut(s)	102, 131, 383, 782, 902, 2861
ScaI	AGTACT	1 cut(s)	952
SchI	GAGTC	4 cut(s)	970, 1583, 1811, 2828
ScrFI	CCNGG	3 cut(s)	380, 2037, 2760
SduI	GDGCHC	5 cut(s)	27, 763, 1297, 1964, 2473
SfcI	CTRYAG	3 cut(s)	981, 2412, 2496
SfoI	GGCGCC	1 cut(s)	288
SinI	GGWCC	6 cut(s)	102, 131, 383, 782, 902, 2861
SmlI	CTYRAG	1 cut(s)	356
SmoI	CTYRAG	1 cut(s)	356
SsiI	CCGC	9 cut(s)	35, 41, 164, 512, 639, 991, 1835, 1955, 1979
SspDI	GGCGCC	1 cut(s)	286
StyD4I	CCNGG	3 cut(s)	378, 2035, 2758
StyI	CCWWGG	4 cut(s)	189, 523, 684, 1166
TaaI	ACNGT	4 cut(s)	651, 765, 1299, 2324
TaiI	ACGT	4 cut(s)	543, 1396, 1454, 2781
TaqI	TCGA	3 cut(s)	202, 257, 2687
TatI	WGTACW	3 cut(s)	817, 950, 1048
TauI	GCSGC	2 cut(s)	37, 515
Tru1I	TTAA	9 cut(s)	345, 357, 491, 503, 1080, 1598, 1682, 2556, 2985
Tru9I	TTAA	9 cut(s)	345, 357, 491, 503, 1080, 1598, 1682, 2556, 2985
TscAI	CASTG	5 cut(s)	861, 882, 1343, 1362, 2899
TseFI	GTSAC	2 cut(s)	1353, 2762
TseI	GCWGC	7 cut(s)	470, 509, 986, 1508, 1560, 1940, 2332
Tsp45I	GTSAC	2 cut(s)	1353, 2762
TspDTI	ATGAA	6 cut(s)	533, 608, 819, 1125, 2604, 2955
TspGWI	ACGGA	4 cut(s)	236, 960, 1633, 2926
TspRI	CASTG	5 cut(s)	861, 882, 1343, 1362, 2899
Vha464I	CTTAAG	1 cut(s)	356
VneI	GTGCAC	2 cut(s)	1293, 2469
VpaK11BI	GGWCC	6 cut(s)	102, 131, 383, 782, 902, 2861
XapI	RAATTY	6 cut(s)	446, 1317, 1474, 2255, 2377, 2490
XbaI	TCTAGA	4 cut(s)	1760, 2135, 2207, 2515
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2666
XmnI	GAANNNNTTC	1 cut(s)	724
ZrmI	AGTACT	1 cut(s)	952
Zsp2I	ATGCAT	2 cut(s)	625, 811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.