Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004984

Physical Location & Seq

Genomic Coordinates Forward (+)

30484138 .. 30489887

Gene Structure 5750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1209200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGGATCCGCCTCTGAACGCCCAACTCACTCAGTCGAGTCCGCCGGCGTTCTCAATTGGGGAAAAGAGGCCGATTGGGAACGGAGGAGAAGGAGATTTGGGGACCCAATTGAACAAGAAGCCCAGATTGGGACCCAATTCGGAGAAAGATCTGAGGAGGGTGGCGGAGATTGTGCTGGCCTTGTCGACTATGGCCAAGATTCGAGGGGGCAAGAAGCCCACGGAGCCGGAGATTAGGCTTATGGGGGAAGCTAGGTCGAAGCTGGTGGAGCTGTGTGAAGGGTTGGCCCCTAAGGATATTGTGGGTAGGGATGCAATTGGGGCTGTGATTGAGGATGCGGGGCTCAATGCTATGCTTAAGGAACAGAGATTAGGATTCTGGGGTCCCAAGTTGACGATTGCGGAGAAATTTTTGCAGACGAAGAGGAAAATGGAAGAATCCAAGAAATTCTCTGCACTAGCTCAACCTGCTACGCATCCCGCTCACCAATTTAAAAAAAGCTTCAATGCAGCAGCTGAAACCCATGGGATGCCGCATACTGTTCATATGATTCCTACAAGCAAACCAAGTCATGCACCAATTTCCTCAGGAGGTTTCCCTGTTACTCCGTCTCTTGTTCATGTATCCACGGCAACTCCCACACCTACACAGTATCAGTTTCCCAACAATGATGTTAGAGCATCCATGGTGTCTAGTGGTTTTCCTAGCATCCATCTAGGCAGGGATTCTACTACCCCAACAGTGCTTAGAGTTGAAAGAGCCCAGTTCAGATCAGATGGAGGACCAAATGCAAATGCATCTTCTTATGCATCTCAAGTACAAGCAAATTCGTCCTCAAATCATCCACTTCCATCAGTGAATGCTCCAGCTTGGTCAGTGCAAACTCAATCTGCCAAAAGTGGACCAGAACACAAGGTGCCAAATCATATATCCGTCAAAGTTGAAGGAAGTACTGGTATGAATATGCCACAGATGACTCCTGTAGCTGCACTGAATCAGAATACCAAGCCATTTGTCTCCCAATTAGCTTCTGGAAATCTACCCATTGTACATCAGCCCTTGCAACAGATGGACTTTGTTAAAGCTCATTCGCTTTCTAACAATCACAATGAAATTGCGAAAATTATTCAGAAATTATTGCAACCACAGCCTCCTGATCATCCTACATGGATTCCTCCATCAAGGGATTACATGAGTAAGTCTTTGGCTTGCCAGAGTTGCCAGCTTACCATCAATGAGGTAGACAATGTTCTTATTTGCGATGCCTGTGAGAGAGGATATCACATAATGTGTGCACAATCATCTAATCAGAGAGGAATTCCTAGAGGTGAGTGGCACTGCATGAGATGCCTGTCATTGAGCAACGGAAAGCCTTTGCCTCCCAAGTATGGACGTGTGATGAGAAGTAATATACAAGTAAAAGTCCCTTCTAACACAGCTGGAGTTCAAACATCCTTGGAGAATAAACTGGGAACTTTTGATCTAAAGGTCAATCAGCCGAAGACAACTGCAAAGGGAAGTTCTGTTTTGCAGAATATTGCTGGTATAGGTGGTGGGGCCAGCAATCACGTTGAGTCAGCACCAGATCTAAAGATTTTAAATGCAAAAGAATCTCAAGTAAAGAATCTCACATCAAGTATTAAAAATATGGATGAGAAACCTCTTTCTGGAAGTTACCCATCGATAGAAAGATCGGAGGAGAGATGTCCTGAATCAAAATCAGAGCCTCCTGCTGAACCAAAAGAAATTACTAGATCATCTAGAGTTGAAGAAAGACATTCTGAATCAATTGCAGAACCTCCTGCTGAATCAAATGTGGTGCGTCCTGTTGAACCAAAAGAAACTACTGAATTCTCTCGAGTTGAAGAGAGACCTTCTGAATCAAAAGCAGAACCTCCTGCTCAATCAAAAGCAGAGCCTCGTACTGAACCAAAAGAAATTATTGAATCATTTAGAGTTGATGAGATACCTTCTGAATCGAAGGCAGAACTTCCTCCTGAATCAAAAGAGGACCTTCCTGACGAATCAAATGCAGAGCCTCATGGTGAACCAAAGGAAACTACTGAATCATCTAGAGTTGAAGAGAGGCCTTCTGATTCAAAAGCAGAGCCTCCTGTTGAACCACAAGAAACTACTGAATCATCTAGAGTTGAAGAGATACGTTTTGAATCAAAAGCAGAACCTTCTGCTGATTTTTTCAACAAAGGTGTGGATAAGTCTGATCACTCCCAACCCCCTTCCAACACACAAGTTGTGGACTGTGCTGGGCTGCCCAACTGTTCAGAAGTTCCATCAATGATATTCCAGAATTCTACATTGAAAAACCCAGATACTTCTCACTTGGTAGGAAACTCTGGCTCCTCTTTAAGATATGACATCAAACAGGATGACCAAAGCGGTGCACAAGCAAATACTGGTGAAAGTTCTGTAGCTAGTGGTCGGGCTCTAGAGCATTTCAGATTTTGTTCAGATGGCTTGAAAGTTGTTGAATGGATTGGCGATGTAGTTCAAGGTGGTGATGAAAAAATATATTACCATACTTGTTGCATTGATGAGGTAACATATCAACTGCGAGATCATGCTCTTTTCCAGTCTAGTCATGGAAAATTGATACCCTCGAAGCTTCAGTCCATGTGGGAGGATAGGAAAACTGGGTCAAAGTGGGCAATTGTCAACAGGTGCTACTTTCCTGGTGACTTACCAGAGAATGTTGGTCGCCCATCTACACCTGAAAGCAATGAGGTCTATGAATCTAATCATGATAGCACTGTAATGGCTGGTTTGATTCGAGGTCCTTGTGAAGTTCTTTCTCCTGCTAAGTTCAGTGGAGAAACTGAAAGAAGGAGCCAGTTAGAACAAGAGGCAAATAATGAATTGCGGCCAATCTTCCTTTGCAAATGGATTTATGATGAGTTTAAAGGGGTATTGGAGTCTGTTCCTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH PHD

Protein Analysis

982

Amino Acids

107.35

Weight (kDa)

5.96

Isoelectric Point (pI)

56.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7797	PF25073	38 - 94	6e-23	Domain of unknown function (DUF7797)
BAH	PF01426	874 - 980	2.3e-10	BAH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50620 AT3G20280 AT3G20280 AT3G20280 AT3G20280 AT3G20280
fragaria_vesca	FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 FvH4_3g23572
malus_domestica	MD03G1193000.v1.1 MD11G1209200.v1.1
prunus_persica	Prupe.4G224000_v2.0.a1 Prupe.4G224000_v2.0.a1
pyrus_communis	pycom03g14530 pycom03g14540 pycom11g18420
rosa_chinensis	RchiOBHm_Chr5g0041571
rosa_laevigata	RLG00000034083
rosa_multiflora	Rmu_sc0003051.1_g000004
rosa_roxburghii	Rroxscaffold_1G00038930
rosa_rugosa	Rorug05G0193800 Rorug05G0193900 Rorug05G0193900
rosa_samantha	Rh5AG279500 Rh5BG283900 Rh5BG284800 Rh5CG316800 Rh5DG293600
rosa_wichuraiana	Rw5G026310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	475
AccB1I	GGYRCC	1 cut(s)	916
AccBSI	CCGCTC	1 cut(s)	482
AccI	GTMKAC	2 cut(s)	185, 1242
AciI	CCGC	9 cut(s)	8, 41, 164, 338, 401, 480, 533, 2397, 2878
AclWI	GGATC	1 cut(s)	12
AcoI	YGGCCR	2 cut(s)	192, 2879
AcsI	RAATTY	6 cut(s)	407, 446, 826, 1317, 1850, 2308
AcuI	CTGAAG	1 cut(s)	2609
AdeI	CACNNNGTG	1 cut(s)	916
AfaI	GTAC	4 cut(s)	819, 952, 1050, 1924
AfiI	CCNNNNNNNGG	3 cut(s)	128, 1388, 1667
AflII	CTTAAG	1 cut(s)	356
AflIII	ACRYGT	1 cut(s)	1393
AjiI	CACGTC	1 cut(s)	1394
AjnI	CCWGG	1 cut(s)	2689
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
Alw21I	GWGCWC	2 cut(s)	1297, 2404
Alw26I	GTCTC	3 cut(s)	615, 1021, 1864
Alw44I	GTGCAC	2 cut(s)	1293, 2400
AlwI	GGATC	1 cut(s)	12
AlwNI	CAGNNNCTG	1 cut(s)	515
Ama87I	CYCGRG	1 cut(s)	1857
AoxI	GGCC	7 cut(s)	68, 177, 192, 285, 1557, 2087, 2879
ApaLI	GTGCAC	2 cut(s)	1293, 2400
ApeKI	GCWGC	4 cut(s)	509, 512, 986, 2269
ApoI	RAATTY	6 cut(s)	407, 446, 826, 1317, 1850, 2308
ArsI	GACNNNNNNTTYG	2 cut(s)	2612, 2644
AspS9I	GGNCC	9 cut(s)	102, 131, 286, 383, 782, 902, 1557, 2011, 2792
AsuHPI	GGTGA	6 cut(s)	476, 1340, 2057, 2429, 2528, 2705
AvaI	CYCGRG	1 cut(s)	1857
AvaII	GGWCC	7 cut(s)	102, 131, 383, 782, 902, 2011, 2792
AxyI	CCTNAGG	2 cut(s)	291, 586
BaeGI	GKGCMC	2 cut(s)	1297, 2404
BalI	TGGCCA	1 cut(s)	194
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	916
BanII	GRGCYC	3 cut(s)	345, 763, 2446
BbsI	GAAGAC	1 cut(s)	1508
Bbv12I	GWGCWC	2 cut(s)	1297, 2404
BbvI	GCAGC	4 cut(s)	521, 524, 973, 2256
BceAI	ACGGC	1 cut(s)	645
BcgI	CGANNNNNNTGC	2 cut(s)	2012, 2046
BciT130I	CCWGG	1 cut(s)	2691
BciVI	GTATCC	1 cut(s)	634
BclI	TGATCA	2 cut(s)	1156, 2221
BcoDI	GTCTC	3 cut(s)	615, 1021, 1864
BfmI	CTRYAG	2 cut(s)	981, 2427
BfrI	CTTAAG	1 cut(s)	356
BfuAI	ACCTGC	1 cut(s)	475
BfuI	GTATCC	1 cut(s)	634
BglII	AGATCT	2 cut(s)	148, 1585
BisI	GCNGC	6 cut(s)	510, 513, 533, 987, 2270, 2879
BlsI	GCNGC	6 cut(s)	511, 514, 534, 988, 2271, 2880
BmcAI	AGTACT	1 cut(s)	952
Bme1390I	CCNGG	1 cut(s)	2691
Bme18I	GGWCC	7 cut(s)	102, 131, 383, 782, 902, 2011, 2792
BmeT110I	CYCGRG	1 cut(s)	1857
BmgBI	CACGTC	1 cut(s)	1394
BmgT120I	GGNCC	9 cut(s)	102, 131, 286, 383, 782, 902, 1557, 2011, 2792
BmrFI	CCNGG	1 cut(s)	2691
BmrI	ACTGGG	3 cut(s)	757, 1478, 2661
BmuI	ACTGGG	3 cut(s)	757, 1478, 2661
BpiI	GAAGAC	1 cut(s)	1508
BpmI	CTGGAG	2 cut(s)	849, 1461
BpuEI	CTTGAG	2 cut(s)	798, 1599
Bsa29I	ATCGAT	1 cut(s)	1682
BsaI	GGTCTC	1 cut(s)	1864
BsaJI	CCNNGG	5 cut(s)	219, 523, 627, 684, 1455
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 2342, 2372
Bsc4I	CCNNNNNNNGG	3 cut(s)	128, 1388, 1667
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	7 cut(s)	763, 958, 1473, 2419, 2590, 2656, 2848
Bse21I	CCTNAGG	2 cut(s)	291, 586
Bse3DI	GCAATG	1 cut(s)	2743
BseBI	CCWGG	1 cut(s)	2691
BseCI	ATCGAT	1 cut(s)	1682
BseDI	CCNNGG	5 cut(s)	219, 523, 627, 684, 1455
BseLI	CCNNNNNNNGG	3 cut(s)	128, 1388, 1667
BseMI	GCAATG	1 cut(s)	2743
BseMII	CTCAG	4 cut(s)	44, 143, 600, 2931
BseNI	ACTGG	7 cut(s)	763, 958, 1473, 2419, 2590, 2656, 2848
BseRI	GAGGAG	4 cut(s)	99, 169, 1712, 2350
BseSI	GKGCMC	2 cut(s)	1297, 2404
BseXI	GCAGC	4 cut(s)	521, 524, 973, 2256
BseYI	CCCAGC	1 cut(s)	2264
BsgI	GTGCAG	2 cut(s)	438, 972
BshFI	GGCC	7 cut(s)	70, 179, 194, 287, 1559, 2089, 2881
BshNI	GGYRCC	1 cut(s)	916
BshVI	ATCGAT	1 cut(s)	1682
BsiHKAI	GWGCWC	2 cut(s)	1297, 2404
BsiHKCI	CYCGRG	1 cut(s)	1857
BsiSI	CCGG	2 cut(s)	44, 227
BslFI	GGGAC	4 cut(s)	115, 144, 369, 1409
BslI	CCNNNNNNNGG	3 cut(s)	128, 1388, 1667
BsmAI	GTCTC	3 cut(s)	615, 1021, 1864
BsmBI	CGTCTC	1 cut(s)	615
BsmFI	GGGAC	4 cut(s)	115, 144, 369, 1409
BsmI	GAATGC	1 cut(s)	865
BsnI	GGCC	7 cut(s)	70, 179, 194, 287, 1559, 2089, 2881
Bso31I	GGTCTC	1 cut(s)	1864
BsoBI	CYCGRG	1 cut(s)	1857
Bsp1286I	GDGCHC	5 cut(s)	345, 763, 1297, 2404, 2446
Bsp1407I	TGTACA	1 cut(s)	1048
Bsp19I	CCATGG	2 cut(s)	523, 684
BspACI	CCGC	9 cut(s)	8, 41, 164, 338, 401, 480, 533, 2397, 2878
BspANI	GGCC	7 cut(s)	70, 179, 194, 287, 1559, 2089, 2881
BspCNI	CTCAG	4 cut(s)	43, 144, 599, 2932
BspDI	ATCGAT	1 cut(s)	1682
BspHI	TCATGA	1 cut(s)	2758
BspMI	ACCTGC	1 cut(s)	475
BspPI	GGATC	1 cut(s)	12
BspT107I	GGYRCC	1 cut(s)	916
BspTI	CTTAAG	1 cut(s)	356
BspTNI	GGTCTC	1 cut(s)	1864
BsrBI	CCGCTC	1 cut(s)	482
BsrDI	GCAATG	1 cut(s)	2743
BsrFI	RCCGGY	1 cut(s)	43
BsrGI	TGTACA	1 cut(s)	1048
BsrI	ACTGG	7 cut(s)	763, 958, 1473, 2419, 2590, 2656, 2848
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	5 cut(s)	219, 523, 627, 684, 1455
BssT1I	CCWWGG	3 cut(s)	523, 684, 1455
Bst2UI	CCWGG	1 cut(s)	2691
Bst4CI	ACNGT	6 cut(s)	541, 651, 742, 2261, 2279, 2770
Bst6I	CTCTTC	4 cut(s)	416, 1860, 2076, 2148
BstAFI	CTTAAG	1 cut(s)	356
BstAPI	GCANNNNNTGC	1 cut(s)	1347
BstAUI	TGTACA	1 cut(s)	1048
BstC8I	GCNNGC	5 cut(s)	45, 177, 1210, 1223, 1561
BstDEI	CTNAG	7 cut(s)	30, 152, 291, 586, 746, 2817, 2940
BstDSI	CCRYGG	4 cut(s)	219, 523, 627, 684
BstMAI	GTCTC	3 cut(s)	615, 1021, 1864
BstMWI	GCNNNNNNNGC	7 cut(s)	223, 268, 320, 467, 1147, 1218, 1347
BstNI	CCWGG	1 cut(s)	2691
BstSCI	CCNGG	1 cut(s)	2689
BstSFI	CTRYAG	2 cut(s)	981, 2427
BstSLI	GKGCMC	2 cut(s)	1297, 2404
BstV1I	GCAGC	4 cut(s)	521, 524, 973, 2256
BstV2I	GAAGAC	1 cut(s)	1508
BstX2I	RGATCY	3 cut(s)	4, 148, 1585
BstYI	RGATCY	3 cut(s)	4, 148, 1585
Bsu15I	ATCGAT	1 cut(s)	1682
Bsu36I	CCTNAGG	2 cut(s)	291, 586
BsuI	GTATCC	1 cut(s)	634
BsuRI	GGCC	7 cut(s)	70, 179, 194, 287, 1559, 2089, 2881
BsuTUI	ATCGAT	1 cut(s)	1682
BtgI	CCRYGG	4 cut(s)	219, 523, 627, 684
BtgZI	GCGATG	2 cut(s)	1275, 2514
BtrI	CACGTC	1 cut(s)	1394
BtsI	GCAGTG	1 cut(s)	1336
BtsIMutI	CAGTG	7 cut(s)	747, 861, 882, 989, 1336, 2766, 2830
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	5 cut(s)	45, 177, 1210, 1223, 1561
CaiI	CAGNNNCTG	1 cut(s)	515
CciI	TCATGA	1 cut(s)	2758
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	9 cut(s)	102, 131, 286, 383, 782, 902, 1557, 2011, 2792
ClaI	ATCGAT	1 cut(s)	1682
CseI	GACGC	1 cut(s)	1811
Csp6I	GTAC	4 cut(s)	818, 951, 1049, 1923
CviQI	GTAC	4 cut(s)	818, 951, 1049, 1923
DdeI	CTNAG	7 cut(s)	30, 152, 291, 586, 746, 2817, 2940
DraI	TTTAAA	3 cut(s)	493, 1599, 2917
DraIII	CACNNNGTG	1 cut(s)	916
EaeI	YGGCCR	2 cut(s)	192, 2879
Eam1104I	CTCTTC	4 cut(s)	416, 1860, 2076, 2148
EarI	CTCTTC	4 cut(s)	416, 1860, 2076, 2148
EciI	GGCGGA	2 cut(s)	30, 179
Eco130I	CCWWGG	3 cut(s)	523, 684, 1455
Eco147I	AGGCCT	1 cut(s)	2089
Eco24I	GRGCYC	3 cut(s)	345, 763, 2446
Eco31I	GGTCTC	1 cut(s)	1864
Eco32I	GATATC	1 cut(s)	1280
Eco47I	GGWCC	7 cut(s)	102, 131, 383, 782, 902, 2011, 2792
Eco57I	CTGAAG	1 cut(s)	2609
Eco81I	CCTNAGG	2 cut(s)	291, 586
Eco88I	CYCGRG	1 cut(s)	1857
EcoO109I	RGGNCCY	5 cut(s)	102, 131, 383, 2011, 2792
EcoRI	GAATTC	3 cut(s)	1317, 1850, 2308
EcoRII	CCWGG	1 cut(s)	2689
EcoRV	GATATC	1 cut(s)	1280
EcoT14I	CCWWGG	3 cut(s)	523, 684, 1455
EcoT22I	ATGCAT	2 cut(s)	799, 811
EcoT38I	GRGCYC	3 cut(s)	345, 763, 2446
ErhI	CCWWGG	3 cut(s)	523, 684, 1455
Esp3I	CGTCTC	1 cut(s)	615
FalI	AAGNNNNNCTT	2 cut(s)	1998, 2030
FaqI	GGGAC	4 cut(s)	115, 144, 369, 1409
FauI	CCCGC	2 cut(s)	331, 487
FauNDI	CATATG	1 cut(s)	546
FbaI	TGATCA	2 cut(s)	1156, 2221
FblI	GTMKAC	2 cut(s)	185, 1242
Fnu4HI	GCNGC	6 cut(s)	510, 513, 533, 987, 2270, 2879
FriOI	GRGCYC	3 cut(s)	345, 763, 2446
Fsp4HI	GCNGC	6 cut(s)	510, 513, 533, 987, 2270, 2879
GluI	GCNGC	6 cut(s)	510, 513, 533, 987, 2270, 2879
GsaI	CCCAGC	1 cut(s)	2268
GsuI	CTGGAG	2 cut(s)	849, 1461
HaeIII	GGCC	7 cut(s)	70, 179, 194, 287, 1559, 2089, 2881
HapII	CCGG	2 cut(s)	44, 227
HgaI	GACGC	1 cut(s)	1811
HincII	GTYRAC	3 cut(s)	186, 393, 2674
HindII	GTYRAC	3 cut(s)	186, 393, 2674
HindIII	AAGCTT	2 cut(s)	499, 2621
HpaII	CCGG	2 cut(s)	44, 227
HphI	GGTGA	6 cut(s)	476, 1340, 2057, 2429, 2528, 2705
Hpy166II	GTNNAC	9 cut(s)	186, 393, 902, 1243, 1295, 2048, 2257, 2402, 2674
Hpy8I	GTNNAC	9 cut(s)	186, 393, 902, 1243, 1295, 2048, 2257, 2402, 2674
HpyCH4III	ACNGT	6 cut(s)	541, 651, 742, 2261, 2279, 2770
HpyCH4IV	ACGT	3 cut(s)	1393, 1569, 2161
HpyF10VI	GCNNNNNNNGC	7 cut(s)	223, 268, 320, 467, 1147, 1218, 1347
HpyF3I	CTNAG	7 cut(s)	30, 152, 291, 586, 746, 2817, 2940
HpySE526I	ACGT	3 cut(s)	1393, 1569, 2161
KflI	GGGWCCC	3 cut(s)	102, 131, 383
KroI	GCCGGC	1 cut(s)	43
KroNI	GCCGGC	1 cut(s)	45
Ksp22I	TGATCA	2 cut(s)	1156, 2221
LmnI	GCTCC	5 cut(s)	223, 268, 868, 2363, 2844
Lsp1109I	GCAGC	4 cut(s)	521, 524, 973, 2256
MaeII	ACGT	3 cut(s)	1393, 1569, 2161
MaeIII	GTNAC	4 cut(s)	601, 1673, 2557, 2693
MbiI	CCGCTC	1 cut(s)	482
MboII	GAAGA	9 cut(s)	433, 446, 792, 1513, 1781, 1877, 2093, 2165, 2878
MfeI	CAATTG	5 cut(s)	54, 107, 315, 1788, 2667
MflI	RGATCY	3 cut(s)	4, 148, 1585
MhlI	GDGCHC	5 cut(s)	345, 763, 1297, 2404, 2446
MlsI	TGGCCA	1 cut(s)	194
MluNI	TGGCCA	1 cut(s)	194
MlyI	GAGTC	4 cut(s)	46, 970, 1583, 2939
MmeI	TCCRAC	1 cut(s)	2265
Mox20I	TGGCCA	1 cut(s)	194
Mph1103I	ATGCAT	2 cut(s)	799, 811
MreI	CGCCGGCG	1 cut(s)	43
MroNI	GCCGGC	1 cut(s)	43
MscI	TGGCCA	1 cut(s)	194
MseI	TTAA	7 cut(s)	357, 492, 1080, 1598, 1641, 2366, 2916
MslI	CAYNNNNRTG	1 cut(s)	2771
Msp20I	TGGCCA	1 cut(s)	194
MspA1I	CMGCKG	2 cut(s)	515, 1439
MspCI	CTTAAG	1 cut(s)	356
MspI	CCGG	2 cut(s)	44, 227
MspR9I	CCNGG	1 cut(s)	2691
MunI	CAATTG	5 cut(s)	54, 107, 315, 1788, 2667
Mva1269I	GAATGC	1 cut(s)	865
MvaI	CCWGG	1 cut(s)	2691
MwoI	GCNNNNNNNGC	7 cut(s)	223, 268, 320, 467, 1147, 1218, 1347
NaeI	GCCGGC	1 cut(s)	45
NcoI	CCATGG	2 cut(s)	523, 684
NdeI	CATATG	1 cut(s)	546
NgoMIV	GCCGGC	1 cut(s)	43
NmuCI	GTSAC	1 cut(s)	2693
NsiI	ATGCAT	2 cut(s)	799, 811
PaeR7I	CTCGAG	1 cut(s)	1857
PagI	TCATGA	1 cut(s)	2758
PceI	AGGCCT	1 cut(s)	2089
PctI	GAATGC	1 cut(s)	865
PdiI	GCCGGC	1 cut(s)	45
PkrI	GCNGC	6 cut(s)	511, 514, 534, 988, 2271, 2880
PleI	GAGTC	4 cut(s)	45, 970, 1582, 2938
PpsI	GAGTC	4 cut(s)	45, 970, 1582, 2938
PpuMI	RGGWCCY	5 cut(s)	102, 131, 383, 2011, 2792
Psp5II	RGGWCCY	5 cut(s)	102, 131, 383, 2011, 2792
Psp6I	CCWGG	1 cut(s)	2689
PspFI	CCCAGC	1 cut(s)	2264
PspGI	CCWGG	1 cut(s)	2689
PspPI	GGNCC	9 cut(s)	102, 131, 286, 383, 782, 902, 1557, 2011, 2792
PspPPI	RGGWCCY	5 cut(s)	102, 131, 383, 2011, 2792
PsrI	GAACNNNNNNTAC	2 cut(s)	1233, 1265
PstNI	CAGNNNCTG	1 cut(s)	515
PsuI	RGATCY	3 cut(s)	4, 148, 1585
PvuII	CAGCTG	2 cut(s)	515, 1439
RsaI	GTAC	4 cut(s)	819, 952, 1050, 1924
RsaNI	GTAC	4 cut(s)	818, 951, 1049, 1923
RseI	CAYNNNNRTG	1 cut(s)	2771
SalI	GTCGAC	1 cut(s)	184
SaqAI	TTAA	7 cut(s)	357, 492, 1080, 1598, 1641, 2366, 2916
SatI	GCNGC	6 cut(s)	510, 513, 533, 987, 2270, 2879
Sau96I	GGNCC	9 cut(s)	102, 131, 286, 383, 782, 902, 1557, 2011, 2792
ScaI	AGTACT	1 cut(s)	952
SchI	GAGTC	4 cut(s)	46, 970, 1583, 2939
ScrFI	CCNGG	1 cut(s)	2691
SduI	GDGCHC	5 cut(s)	345, 763, 1297, 2404, 2446
SfcI	CTRYAG	2 cut(s)	981, 2427
Sfr274I	CTCGAG	1 cut(s)	1857
SgrAI	CRCCGGYG	1 cut(s)	43
SinI	GGWCC	7 cut(s)	102, 131, 383, 782, 902, 2011, 2792
SlaI	CTCGAG	1 cut(s)	1857
SmiMI	CAYNNNNRTG	1 cut(s)	2771
SmlI	CTYRAG	4 cut(s)	356, 813, 1614, 1857
SmoI	CTYRAG	4 cut(s)	356, 813, 1614, 1857
SseBI	AGGCCT	1 cut(s)	2089
SsiI	CCGC	9 cut(s)	8, 41, 164, 338, 401, 480, 533, 2397, 2878
SspI	AATATT	1 cut(s)	1537
StuI	AGGCCT	1 cut(s)	2089
StyD4I	CCNGG	1 cut(s)	2689
StyI	CCWWGG	3 cut(s)	523, 684, 1455
TaaI	ACNGT	6 cut(s)	541, 651, 742, 2261, 2279, 2770
TaiI	ACGT	3 cut(s)	1396, 1572, 2164
TaqI	TCGA	9 cut(s)	35, 185, 202, 257, 1682, 1858, 1979, 2618, 2788
TatI	WGTACW	3 cut(s)	817, 950, 1048
TauI	GCSGC	2 cut(s)	535, 2881
Tru1I	TTAA	7 cut(s)	357, 492, 1080, 1598, 1641, 2366, 2916
Tru9I	TTAA	7 cut(s)	357, 492, 1080, 1598, 1641, 2366, 2916
TscAI	CASTG	7 cut(s)	747, 861, 882, 996, 1343, 2773, 2830
TseFI	GTSAC	1 cut(s)	2693
TseI	GCWGC	4 cut(s)	509, 512, 986, 2269
Tsp45I	GTSAC	1 cut(s)	2693
TspDTI	ATGAA	7 cut(s)	533, 608, 974, 1125, 2535, 2763, 2886
TspGWI	ACGGA	5 cut(s)	96, 236, 597, 922, 1380
TspRI	CASTG	7 cut(s)	747, 861, 882, 996, 1343, 2773, 2830
Vha464I	CTTAAG	1 cut(s)	356
VneI	GTGCAC	2 cut(s)	1293, 2400
VpaK11BI	GGWCC	7 cut(s)	102, 131, 383, 782, 902, 2011, 2792
XapI	RAATTY	6 cut(s)	407, 446, 826, 1317, 1850, 2308
XbaI	TCTAGA	4 cut(s)	1760, 2072, 2144, 2446
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1028, 2597
XhoI	CTCGAG	1 cut(s)	1857
XmiI	GTMKAC	2 cut(s)	185, 1242
ZrmI	AGTACT	1 cut(s)	952
Zsp2I	ATGCAT	2 cut(s)	799, 811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.