PHD zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G50620 AT3G20280 AT3G20280 AT3G20280 AT3G20280 AT3G20280 |
| fragaria_vesca | FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 FvH4_3g23572 |
| malus_domestica | MD03G1193000.v1.1 MD11G1209200.v1.1 |
| prunus_persica | Prupe.4G224000_v2.0.a1 Prupe.4G224000_v2.0.a1 |
| pyrus_communis | pycom03g14530 pycom03g14540 pycom11g18420 |
| rosa_chinensis | RchiOBHm_Chr5g0041571 |
| rosa_laevigata | RLG00000034083 |
| rosa_multiflora | Rmu_sc0003051.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00038930 |
| rosa_rugosa | Rorug05G0193800 Rorug05G0193900 Rorug05G0193900 |
| rosa_samantha | Rh5AG279500 Rh5BG283900 Rh5BG284800 Rh5CG316800 Rh5DG293600 |
| rosa_wichuraiana | Rw5G026310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 475 |
| AccB1I | GGYRCC | 3 cut(s) | 286, 742, 916 |
| AccI | GTMKAC | 1 cut(s) | 626 |
| AccII | CGCG | 1 cut(s) | 991 |
| AciI | CCGC | 5 cut(s) | 41, 47, 164, 512, 991 |
| AclI | AACGTT | 1 cut(s) | 540 |
| AclWI | GGATC | 4 cut(s) | 12, 156, 193, 1155 |
| AcoI | YGGCCR | 1 cut(s) | 192 |
| AcsI | RAATTY | 3 cut(s) | 446, 826, 859 |
| AcyI | GRCGYC | 1 cut(s) | 287 |
| AdeI | CACNNNGTG | 1 cut(s) | 916 |
| AfaI | GTAC | 3 cut(s) | 819, 952, 1050 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 46, 128, 233 |
| AflII | CTTAAG | 1 cut(s) | 356 |
| AgsI | TTSAA | 3 cut(s) | 112, 755, 815 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| Alw21I | GWGCWC | 2 cut(s) | 763, 904 |
| Alw26I | GTCTC | 2 cut(s) | 55, 1021 |
| Alw44I | GTGCAC | 1 cut(s) | 900 |
| AlwI | GGATC | 4 cut(s) | 12, 156, 193, 1155 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 515, 1031 |
| Ama87I | CYCGRG | 1 cut(s) | 586 |
| AoxI | GGCC | 3 cut(s) | 68, 177, 192 |
| ApaLI | GTGCAC | 1 cut(s) | 900 |
| ApeKI | GCWGC | 4 cut(s) | 34, 470, 509, 986 |
| ApoI | RAATTY | 3 cut(s) | 446, 826, 859 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 724 |
| AspLEI | GCGC | 3 cut(s) | 289, 323, 991 |
| AspS9I | GGNCC | 4 cut(s) | 102, 131, 383, 782 |
| AsuC2I | CCSGG | 1 cut(s) | 380 |
| AsuHPI | GGTGA | 2 cut(s) | 476, 633 |
| AvaI | CYCGRG | 1 cut(s) | 586 |
| AvaII | GGWCC | 4 cut(s) | 102, 131, 383, 782 |
| AxyI | CCTNAGG | 1 cut(s) | 291 |
| BaeGI | GKGCMC | 1 cut(s) | 904 |
| BalI | TGGCCA | 1 cut(s) | 194 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 3 cut(s) | 286, 742, 916 |
| BbsI | GAAGAC | 1 cut(s) | 792 |
| Bbv12I | GWGCWC | 2 cut(s) | 763, 904 |
| BbvI | GCAGC | 4 cut(s) | 21, 457, 521, 973 |
| BccI | CCATC | 3 cut(s) | 424, 487, 616 |
| BceAI | ACGGC | 1 cut(s) | 645 |
| BcnI | CCSGG | 1 cut(s) | 380 |
| BcoDI | GTCTC | 2 cut(s) | 55, 1021 |
| BfaI | CTAG | 4 cut(s) | 252, 693, 705, 716 |
| BfmI | CTRYAG | 1 cut(s) | 981 |
| BfoI | RGCGCY | 2 cut(s) | 290, 324 |
| BfrI | CTTAAG | 1 cut(s) | 356 |
| BfuAI | ACCTGC | 1 cut(s) | 475 |
| BisI | GCNGC | 5 cut(s) | 35, 471, 510, 513, 987 |
| BlpI | GCTNAGC | 1 cut(s) | 351 |
| BlsI | GCNGC | 5 cut(s) | 36, 472, 511, 514, 988 |
| BmcAI | AGTACT | 1 cut(s) | 952 |
| Bme1390I | CCNGG | 1 cut(s) | 380 |
| Bme18I | GGWCC | 4 cut(s) | 102, 131, 383, 782 |
| BmeT110I | CYCGRG | 1 cut(s) | 586 |
| BmgT120I | GGNCC | 4 cut(s) | 102, 131, 383, 782 |
| BmrFI | CCNGG | 1 cut(s) | 380 |
| BmrI | ACTGGG | 1 cut(s) | 100 |
| BmsI | GCATC | 4 cut(s) | 301, 519, 689, 1059 |
| BmuI | ACTGGG | 1 cut(s) | 100 |
| BpiI | GAAGAC | 1 cut(s) | 792 |
| BpmI | CTGGAG | 1 cut(s) | 849 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 351 |
| BpuMI | CCSGG | 1 cut(s) | 380 |
| Bsa29I | ATCGAT | 1 cut(s) | 1159 |
| BsaHI | GRCGYC | 1 cut(s) | 287 |
| BsaI | GGTCTC | 1 cut(s) | 55 |
| BsaJI | CCNNGG | 7 cut(s) | 189, 202, 219, 379, 523, 585, 684 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 619, 649 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 46, 128, 233 |
| Bse118I | RCCGGY | 1 cut(s) | 43 |
| Bse1I | ACTGG | 3 cut(s) | 106, 854, 958 |
| Bse21I | CCTNAGG | 1 cut(s) | 291 |
| BseCI | ATCGAT | 1 cut(s) | 1159 |
| BseDI | CCNNGG | 7 cut(s) | 189, 202, 219, 379, 523, 585, 684 |
| BseGI | GGATG | 6 cut(s) | 316, 475, 534, 680, 841, 847 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 46, 128, 233 |
| BseMII | CTCAG | 2 cut(s) | 44, 143 |
| BseNI | ACTGG | 3 cut(s) | 106, 854, 958 |
| BseRI | GAGGAG | 2 cut(s) | 99, 169 |
| BseSI | GKGCMC | 1 cut(s) | 904 |
| BseXI | GCAGC | 4 cut(s) | 21, 457, 521, 973 |
| BsgI | GTGCAG | 2 cut(s) | 438, 456 |
| Bsh1236I | CGCG | 1 cut(s) | 991 |
| BshFI | GGCC | 3 cut(s) | 70, 179, 194 |
| BshNI | GGYRCC | 3 cut(s) | 286, 742, 916 |
| BshVI | ATCGAT | 1 cut(s) | 1159 |
| BsiHKAI | GWGCWC | 2 cut(s) | 763, 904 |
| BsiHKCI | CYCGRG | 1 cut(s) | 586 |
| BsiSI | CCGG | 3 cut(s) | 44, 227, 379 |
| BslFI | GGGAC | 3 cut(s) | 115, 144, 369 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 46, 128, 233 |
| BsmAI | GTCTC | 2 cut(s) | 55, 1021 |
| BsmFI | GGGAC | 3 cut(s) | 115, 144, 369 |
| BsnI | GGCC | 3 cut(s) | 70, 179, 194 |
| Bso31I | GGTCTC | 1 cut(s) | 55 |
| BsoBI | CYCGRG | 1 cut(s) | 586 |
| Bsp1286I | GDGCHC | 2 cut(s) | 763, 904 |
| Bsp1407I | TGTACA | 1 cut(s) | 1048 |
| Bsp143I | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 351 |
| Bsp19I | CCATGG | 3 cut(s) | 189, 523, 684 |
| BspACI | CCGC | 5 cut(s) | 41, 47, 164, 512, 991 |
| BspANI | GGCC | 3 cut(s) | 70, 179, 194 |
| BspCNI | CTCAG | 2 cut(s) | 43, 144 |
| BspDI | ATCGAT | 1 cut(s) | 1159 |
| BspFNI | CGCG | 1 cut(s) | 991 |
| BspMI | ACCTGC | 1 cut(s) | 475 |
| BspPI | GGATC | 4 cut(s) | 12, 156, 193, 1155 |
| BspT107I | GGYRCC | 3 cut(s) | 286, 742, 916 |
| BspTI | CTTAAG | 1 cut(s) | 356 |
| BspTNI | GGTCTC | 1 cut(s) | 55 |
| BsrFI | RCCGGY | 1 cut(s) | 43 |
| BsrGI | TGTACA | 1 cut(s) | 1048 |
| BsrI | ACTGG | 3 cut(s) | 106, 854, 958 |
| BssAI | RCCGGY | 1 cut(s) | 43 |
| BssECI | CCNNGG | 7 cut(s) | 189, 202, 219, 379, 523, 585, 684 |
| BssMI | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| BssNI | GRCGYC | 1 cut(s) | 287 |
| BssT1I | CCWWGG | 3 cut(s) | 189, 523, 684 |
| Bst4CI | ACNGT | 3 cut(s) | 651, 742, 765 |
| Bst6I | CTCTTC | 2 cut(s) | 416, 715 |
| BstACI | GRCGYC | 1 cut(s) | 287 |
| BstAFI | CTTAAG | 1 cut(s) | 356 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1069 |
| BstAUI | TGTACA | 1 cut(s) | 1048 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 4 cut(s) | 30, 152, 291, 351 |
| BstDSI | CCRYGG | 4 cut(s) | 189, 219, 523, 684 |
| BstF5I | GGATG | 6 cut(s) | 316, 475, 534, 680, 841, 847 |
| BstFNI | CGCG | 1 cut(s) | 991 |
| BstH2I | RGCGCY | 2 cut(s) | 290, 324 |
| BstHHI | GCGC | 3 cut(s) | 289, 323, 991 |
| BstKTI | GATC | 6 cut(s) | 7, 151, 201, 773, 1159, 1163 |
| BstMAI | GTCTC | 2 cut(s) | 55, 1021 |
| BstMBI | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 40, 223, 268, 320, 467, 629, 899, 1069 |
| BstSCI | CCNGG | 1 cut(s) | 378 |
| BstSFI | CTRYAG | 1 cut(s) | 981 |
| BstSLI | GKGCMC | 1 cut(s) | 904 |
| BstUI | CGCG | 1 cut(s) | 991 |
| BstV1I | GCAGC | 4 cut(s) | 21, 457, 521, 973 |
| BstV2I | GAAGAC | 1 cut(s) | 792 |
| BstX2I | RGATCY | 3 cut(s) | 4, 148, 198 |
| BstYI | RGATCY | 3 cut(s) | 4, 148, 198 |
| Bsu15I | ATCGAT | 1 cut(s) | 1159 |
| Bsu36I | CCTNAGG | 1 cut(s) | 291 |
| BsuRI | GGCC | 3 cut(s) | 70, 179, 194 |
| BsuTUI | ATCGAT | 1 cut(s) | 1159 |
| BtgI | CCRYGG | 4 cut(s) | 189, 219, 523, 684 |
| BtsCI | GGATG | 6 cut(s) | 316, 475, 534, 680, 841, 847 |
| BtsIMutI | CAGTG | 2 cut(s) | 861, 882 |
| BveI | ACCTGC | 1 cut(s) | 475 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| CaiI | CAGNNNCTG | 2 cut(s) | 515, 1031 |
| CfoI | GCGC | 3 cut(s) | 289, 323, 991 |
| Cfr10I | RCCGGY | 1 cut(s) | 43 |
| Cfr13I | GGNCC | 4 cut(s) | 102, 131, 383, 782 |
| ClaI | ATCGAT | 1 cut(s) | 1159 |
| CseI | GACGC | 2 cut(s) | 612, 786 |
| Csp6I | GTAC | 3 cut(s) | 818, 951, 1049 |
| CviAII | CATG | 7 cut(s) | 190, 524, 572, 620, 685, 1168, 1193 |
| CviQI | GTAC | 3 cut(s) | 818, 951, 1049 |
| DdeI | CTNAG | 4 cut(s) | 30, 152, 291, 351 |
| DinI | GGCGCC | 1 cut(s) | 288 |
| DpnI | GATC | 6 cut(s) | 6, 150, 200, 772, 1158, 1162 |
| DpnII | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| DraIII | CACNNNGTG | 1 cut(s) | 916 |
| EaeI | YGGCCR | 1 cut(s) | 192 |
| Eam1104I | CTCTTC | 2 cut(s) | 416, 715 |
| EarI | CTCTTC | 2 cut(s) | 416, 715 |
| EciI | GGCGGA | 1 cut(s) | 179 |
| Eco130I | CCWWGG | 3 cut(s) | 189, 523, 684 |
| Eco31I | GGTCTC | 1 cut(s) | 55 |
| Eco47I | GGWCC | 4 cut(s) | 102, 131, 383, 782 |
| Eco81I | CCTNAGG | 1 cut(s) | 291 |
| Eco88I | CYCGRG | 1 cut(s) | 586 |
| EcoO109I | RGGNCCY | 3 cut(s) | 102, 131, 383 |
| EcoRI | GAATTC | 1 cut(s) | 859 |
| EcoT14I | CCWWGG | 3 cut(s) | 189, 523, 684 |
| EcoT22I | ATGCAT | 1 cut(s) | 811 |
| EgeI | GGCGCC | 1 cut(s) | 288 |
| EheI | GGCGCC | 1 cut(s) | 288 |
| ErhI | CCWWGG | 3 cut(s) | 189, 523, 684 |
| FaeI | CATG | 7 cut(s) | 193, 527, 575, 623, 688, 1171, 1196 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 712, 744 |
| FaqI | GGGAC | 3 cut(s) | 115, 144, 369 |
| FatI | CATG | 7 cut(s) | 189, 523, 571, 619, 684, 1167, 1192 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FauNDI | CATATG | 1 cut(s) | 546 |
| FblI | GTMKAC | 1 cut(s) | 626 |
| Fnu4HI | GCNGC | 5 cut(s) | 35, 471, 510, 513, 987 |
| FokI | GGATG | 6 cut(s) | 323, 462, 541, 667, 828, 834 |
| Fsp4HI | GCNGC | 5 cut(s) | 35, 471, 510, 513, 987 |
| FspBI | CTAG | 4 cut(s) | 252, 693, 705, 716 |
| GlaI | GCGC | 3 cut(s) | 288, 322, 990 |
| GluI | GCNGC | 5 cut(s) | 35, 471, 510, 513, 987 |
| GsuI | CTGGAG | 1 cut(s) | 849 |
| HaeII | RGCGCY | 2 cut(s) | 290, 324 |
| HaeIII | GGCC | 3 cut(s) | 70, 179, 194 |
| HapII | CCGG | 3 cut(s) | 44, 227, 379 |
| HgaI | GACGC | 2 cut(s) | 612, 786 |
| HhaI | GCGC | 3 cut(s) | 289, 323, 991 |
| Hin1I | GRCGYC | 1 cut(s) | 287 |
| Hin1II | CATG | 7 cut(s) | 193, 527, 575, 623, 688, 1171, 1196 |
| Hin6I | GCGC | 3 cut(s) | 287, 321, 989 |
| HinP1I | GCGC | 3 cut(s) | 287, 321, 989 |
| HincII | GTYRAC | 3 cut(s) | 186, 393, 943 |
| HindII | GTYRAC | 3 cut(s) | 186, 393, 943 |
| HindIII | AAGCTT | 2 cut(s) | 353, 499 |
| HinfI | GANTC | 5 cut(s) | 437, 550, 725, 994, 1172 |
| HpaII | CCGG | 3 cut(s) | 44, 227, 379 |
| HphI | GGTGA | 2 cut(s) | 476, 633 |
| Hpy166II | GTNNAC | 5 cut(s) | 186, 393, 627, 902, 943 |
| Hpy188I | TCNGA | 8 cut(s) | 142, 153, 203, 403, 770, 775, 999, 1131 |
| Hpy188III | TCNNGA | 3 cut(s) | 588, 1032, 1154 |
| Hpy8I | GTNNAC | 5 cut(s) | 186, 393, 627, 902, 943 |
| HpyAV | CCTTC | 4 cut(s) | 83, 139, 272, 1098 |
| HpyCH4III | ACNGT | 3 cut(s) | 651, 742, 765 |
| HpyCH4IV | ACGT | 1 cut(s) | 540 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 40, 223, 268, 320, 467, 629, 899, 1069 |
| HpyF3I | CTNAG | 4 cut(s) | 30, 152, 291, 351 |
| HpySE526I | ACGT | 1 cut(s) | 540 |
| Hsp92I | GRCGYC | 1 cut(s) | 287 |
| Hsp92II | CATG | 7 cut(s) | 193, 527, 575, 623, 688, 1171, 1196 |
| HspAI | GCGC | 3 cut(s) | 287, 321, 989 |
| KasI | GGCGCC | 1 cut(s) | 286 |
| KflI | GGGWCCC | 3 cut(s) | 102, 131, 383 |
| KroI | GCCGGC | 1 cut(s) | 43 |
| KroNI | GCCGGC | 1 cut(s) | 45 |
| Kzo9I | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| LmnI | GCTCC | 2 cut(s) | 223, 268 |
| Lsp1109I | GCAGC | 4 cut(s) | 21, 457, 521, 973 |
| LweI | GCATC | 4 cut(s) | 301, 519, 689, 1059 |
| MaeI | CTAG | 4 cut(s) | 252, 693, 705, 716 |
| MaeII | ACGT | 1 cut(s) | 540 |
| MalI | GATC | 6 cut(s) | 6, 150, 200, 772, 1158, 1162 |
| MboI | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| MboII | GAAGA | 8 cut(s) | 223, 433, 439, 446, 720, 723, 732, 792 |
| MfeI | CAATTG | 2 cut(s) | 54, 315 |
| MflI | RGATCY | 3 cut(s) | 4, 148, 198 |
| MhlI | GDGCHC | 2 cut(s) | 763, 904 |
| MlsI | TGGCCA | 1 cut(s) | 194 |
| MluCI | AATT | 9 cut(s) | 54, 136, 315, 446, 579, 826, 859, 1113, 1133 |
| MluNI | TGGCCA | 1 cut(s) | 194 |
| Mly113I | GGCGCC | 1 cut(s) | 287 |
| Mox20I | TGGCCA | 1 cut(s) | 194 |
| Mph1103I | ATGCAT | 1 cut(s) | 811 |
| MreI | CGCCGGCG | 1 cut(s) | 43 |
| MroNI | GCCGGC | 1 cut(s) | 43 |
| MroXI | GAANNNNTTC | 1 cut(s) | 724 |
| MscI | TGGCCA | 1 cut(s) | 194 |
| MseI | TTAA | 5 cut(s) | 345, 357, 491, 503, 1080 |
| Msp20I | TGGCCA | 1 cut(s) | 194 |
| MspA1I | CMGCKG | 2 cut(s) | 34, 512 |
| MspCI | CTTAAG | 1 cut(s) | 356 |
| MspI | CCGG | 3 cut(s) | 44, 227, 379 |
| MspR9I | CCNGG | 1 cut(s) | 380 |
| MunI | CAATTG | 2 cut(s) | 54, 315 |
| MvnI | CGCG | 1 cut(s) | 991 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 40, 223, 268, 320, 467, 629, 899, 1069 |
| NaeI | GCCGGC | 1 cut(s) | 45 |
| NarI | GGCGCC | 1 cut(s) | 287 |
| NciI | CCSGG | 1 cut(s) | 380 |
| NcoI | CCATGG | 3 cut(s) | 189, 523, 684 |
| NdeI | CATATG | 1 cut(s) | 546 |
| NdeII | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| NgoMIV | GCCGGC | 1 cut(s) | 43 |
| NlaIII | CATG | 7 cut(s) | 193, 527, 575, 623, 688, 1171, 1196 |
| NsiI | ATGCAT | 1 cut(s) | 811 |
| PdiI | GCCGGC | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 1 cut(s) | 724 |
| PfeI | GAWTC | 5 cut(s) | 437, 550, 725, 994, 1172 |
| PkrI | GCNGC | 5 cut(s) | 36, 472, 511, 514, 988 |
| PluTI | GGCGCC | 1 cut(s) | 290 |
| PpuMI | RGGWCCY | 3 cut(s) | 102, 131, 383 |
| Psp1406I | AACGTT | 1 cut(s) | 540 |
| Psp5II | RGGWCCY | 3 cut(s) | 102, 131, 383 |
| PspPI | GGNCC | 4 cut(s) | 102, 131, 383, 782 |
| PspPPI | RGGWCCY | 3 cut(s) | 102, 131, 383 |
| PstNI | CAGNNNCTG | 2 cut(s) | 515, 1031 |
| PsuI | RGATCY | 3 cut(s) | 4, 148, 198 |
| PvuII | CAGCTG | 1 cut(s) | 34 |
| RsaI | GTAC | 3 cut(s) | 819, 952, 1050 |
| RsaNI | GTAC | 3 cut(s) | 818, 951, 1049 |
| SaqAI | TTAA | 5 cut(s) | 345, 357, 491, 503, 1080 |
| SatI | GCNGC | 5 cut(s) | 35, 471, 510, 513, 987 |
| Sau3AI | GATC | 6 cut(s) | 4, 148, 198, 770, 1156, 1160 |
| Sau96I | GGNCC | 4 cut(s) | 102, 131, 383, 782 |
| ScaI | AGTACT | 1 cut(s) | 952 |
| ScrFI | CCNGG | 1 cut(s) | 380 |
| SduI | GDGCHC | 2 cut(s) | 763, 904 |
| SfaNI | GCATC | 4 cut(s) | 301, 519, 689, 1059 |
| SfcI | CTRYAG | 1 cut(s) | 981 |
| SfoI | GGCGCC | 1 cut(s) | 288 |
| SgrAI | CRCCGGYG | 1 cut(s) | 43 |
| SinI | GGWCC | 4 cut(s) | 102, 131, 383, 782 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 9 cut(s) | 54, 136, 315, 446, 579, 826, 859, 1113, 1133 |
| SsiI | CCGC | 5 cut(s) | 41, 47, 164, 512, 991 |
| SspDI | GGCGCC | 1 cut(s) | 286 |
| SspMI | CTAG | 4 cut(s) | 252, 693, 705, 716 |
| StyD4I | CCNGG | 1 cut(s) | 378 |
| StyI | CCWWGG | 3 cut(s) | 189, 523, 684 |
| TaaI | ACNGT | 3 cut(s) | 651, 742, 765 |
| TaiI | ACGT | 1 cut(s) | 543 |
| TaqI | TCGA | 2 cut(s) | 257, 1159 |
| TasI | AATT | 9 cut(s) | 54, 136, 315, 446, 579, 826, 859, 1113, 1133 |
| TatI | WGTACW | 3 cut(s) | 817, 950, 1048 |
| TauI | GCSGC | 1 cut(s) | 515 |
| TfiI | GAWTC | 5 cut(s) | 437, 550, 725, 994, 1172 |
| Tru1I | TTAA | 5 cut(s) | 345, 357, 491, 503, 1080 |
| Tru9I | TTAA | 5 cut(s) | 345, 357, 491, 503, 1080 |
| TscAI | CASTG | 2 cut(s) | 861, 882 |
| TseI | GCWGC | 4 cut(s) | 34, 470, 509, 986 |
| TspDTI | ATGAA | 3 cut(s) | 533, 608, 1125 |
| TspGWI | ACGGA | 4 cut(s) | 236, 792, 960, 1168 |
| TspRI | CASTG | 2 cut(s) | 861, 882 |
| Vha464I | CTTAAG | 1 cut(s) | 356 |
| VneI | GTGCAC | 1 cut(s) | 900 |
| VpaK11BI | GGWCC | 4 cut(s) | 102, 131, 383, 782 |
| XapI | RAATTY | 3 cut(s) | 446, 826, 859 |
| XmiI | GTMKAC | 1 cut(s) | 626 |
| XmnI | GAANNNNTTC | 1 cut(s) | 724 |
| XspI | CTAG | 4 cut(s) | 252, 693, 705, 716 |
| ZrmI | AGTACT | 1 cut(s) | 952 |
| Zsp2I | ATGCAT | 1 cut(s) | 811 |