FvH4_4g03560
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
3207502 .. 3209174
1673 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03560.t1

Sequence Viewer

Length: 828 bp
ATGAGTAAGCAACTGAAACAAGACTATCAAATCTGCGACGAGATCGGCCGGGGACGATTCGGCGTCGTTTCCAAGGCCTTCAAGAACGGCGACGTCTTTGCCGTCAAGTCGGTCGAGAAGCGCCTGGCCTCCGGCGACTCGCTCGACGCGCGGTGTCTTCTAACGGAGCCGAAGATCCTCCGGCTTGTTTCTCCCCACCCCAACGTTATTGGCCTTCACGGGCTTTATGAGGATGAGGACCATCTCCATATGGTCCTCGACATGTGTGACGCACCAGATCTATTCCGACGCGTCACACTTAGGATTTTCGCCGAGCCGGAGGCTGCCTCGGTCATGTCGCAGCTCATGCAGGCCGTTGCGCACTGTCACCAGCTCGGCGTGGCTCACCGAGATATTAAGCCGGACAACATCCTGTTCGACGGCTGGGACCGGCTCCGTCTCGCTGACTTCGGATCGGCGGAGACGTTTGGCGAGGGGGAGCTGATGAGCGGAGTCGTTGGGACACCGTACTATGTGGCGCCGGAGGTTCTTGCCGGGAGGGAGTATGGGGAGAAGGTGGACGTCTGGAGCGCCGGGGTTGTTTTGTACATAATGCTTGCTGGTTTCCCTCCTTTTTACGGCGAGTCTTCGGCTGAGATCTTTGGGGCAGTGCAGAGGGCCAATTTGAGGTTTCCGGCTAGGGTTTTTCACTCCGTCTCGCCGTCGGTGAAGGAGTTGCTGAGGAGGATGCTCTGTAAAGATGTTTCTAGAAGATTCTCGGCTGAGCAAGTTCTCAGACACCCATGGATTACAAGTGGAGGAGGGGCCACAGCTGTGACTGATCATTAA

Protein Analysis

276

Amino Acids

30.5

Weight (kDa)

6.21

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 9 - 263 1.6e-70 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 11 - 258 3e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 96, 564
Acc16I TGCGCA 1 cut(s) 360
AccB1I GGYRCC 1 cut(s) 517
AccBSI CCGCTC 1 cut(s) 489
AccII CGCG 3 cut(s) 149, 151, 291
AciI CCGC 3 cut(s) 151, 458, 489
AclI AACGTT 1 cut(s) 204
AclWI GGATC 2 cut(s) 169, 460
AcoI YGGCCR 1 cut(s) 46
AcyI GRCGYC 4 cut(s) 63, 93, 518, 561
AfaI GTAC 2 cut(s) 509, 587
AfiI CCNNNNNNNGG 2 cut(s) 617, 666
AflIII ACRYGT 2 cut(s) 261, 289
AgsI TTSAA 1 cut(s) 82
AjnI CCWGG 1 cut(s) 123
AleI CACNNNNGTG 1 cut(s) 812
AluBI AGCT 4 cut(s) 343, 373, 481, 812
AluI AGCT 4 cut(s) 343, 373, 481, 812
Alw26I GTCTC 3 cut(s) 443, 455, 700
AlwI GGATC 2 cut(s) 169, 460
AoxI GGCC 7 cut(s) 46, 75, 126, 211, 351, 657, 804
ApeKI GCWGC 2 cut(s) 323, 340
AspLEI GCGC 5 cut(s) 123, 151, 361, 520, 572
AspS9I GGNCC 5 cut(s) 238, 253, 427, 657, 804
AsuC2I CCSGG 3 cut(s) 50, 535, 574
AsuHPI GGTGA 3 cut(s) 359, 377, 718
AvaII GGWCC 3 cut(s) 238, 253, 427
BanI GGYRCC 1 cut(s) 517
BbsI GAAGAC 2 cut(s) 149, 618
BbvCI CCTCAGC 1 cut(s) 719
BbvI GCAGC 2 cut(s) 310, 352
BccI CCATC 1 cut(s) 249
BceAI ACGGC 6 cut(s) 86, 103, 338, 436, 634, 685
BcgI CGANNNNNNTGC 2 cut(s) 80, 114
BciT130I CCWGG 1 cut(s) 125
BclI TGATCA 1 cut(s) 820
BcnI CCSGG 3 cut(s) 50, 535, 574
BcoDI GTCTC 3 cut(s) 443, 455, 700
BfaI CTAG 2 cut(s) 678, 747
BfoI RGCGCY 3 cut(s) 124, 521, 573
BglII AGATCT 2 cut(s) 277, 636
BisI GCNGC 2 cut(s) 324, 341
BlpI GCTNAGC 1 cut(s) 762
BlsI GCNGC 2 cut(s) 325, 342
Bme1390I CCNGG 4 cut(s) 50, 125, 535, 574
Bme18I GGWCC 3 cut(s) 238, 253, 427
BmgT120I GGNCC 5 cut(s) 238, 253, 427, 657, 804
BmiI GGNNCC 5 cut(s) 168, 428, 434, 519, 805
BmrFI CCNGG 4 cut(s) 50, 125, 535, 574
BmsI GCATC 1 cut(s) 717
BpiI GAAGAC 2 cut(s) 149, 618
BplI GAGNNNNNCTC 2 cut(s) 311, 343
BpmI CTGGAG 1 cut(s) 586
Bpu10I CCTNAGC 1 cut(s) 719
Bpu1102I GCTNAGC 1 cut(s) 762
BpuMI CCSGG 3 cut(s) 50, 535, 574
BsaHI GRCGYC 4 cut(s) 63, 93, 518, 561
BsaJI CCNNGG 5 cut(s) 49, 72, 327, 573, 782
Bsc4I CCNNNNNNNGG 2 cut(s) 617, 666
Bse118I RCCGGY 1 cut(s) 429
BseBI CCWGG 1 cut(s) 125
BseDI CCNNGG 5 cut(s) 49, 72, 327, 573, 782
BseGI GGATG 3 cut(s) 238, 408, 732
BseLI CCNNNNNNNGG 2 cut(s) 617, 666
BseMII CTCAG 4 cut(s) 624, 710, 753, 787
BseRI GAGGAG 2 cut(s) 736, 813
BseX3I CGGCCG 1 cut(s) 46
BseXI GCAGC 2 cut(s) 310, 352
BseYI CCCAGC 1 cut(s) 423
BsgI GTGCAG 1 cut(s) 671
Bsh1236I CGCG 3 cut(s) 149, 151, 291
Bsh1285I CGRYCG 2 cut(s) 49, 114
BshFI GGCC 7 cut(s) 48, 77, 128, 213, 353, 659, 806
BshNI GGYRCC 1 cut(s) 517
BsiEI CGRYCG 2 cut(s) 49, 114
BslFI GGGAC 3 cut(s) 66, 440, 514
BslI CCNNNNNNNGG 2 cut(s) 617, 666
BsmAI GTCTC 3 cut(s) 443, 455, 700
BsmBI CGTCTC 3 cut(s) 443, 455, 700
BsmFI GGGAC 3 cut(s) 66, 440, 514
BsnI GGCC 7 cut(s) 48, 77, 128, 213, 353, 659, 806
Bsp1407I TGTACA 1 cut(s) 585
Bsp143I GATC 6 cut(s) 42, 174, 277, 452, 636, 820
Bsp1720I GCTNAGC 1 cut(s) 762
Bsp19I CCATGG 1 cut(s) 782
BspACI CCGC 3 cut(s) 151, 458, 489
BspANI GGCC 7 cut(s) 48, 77, 128, 213, 353, 659, 806
BspCNI CTCAG 4 cut(s) 625, 711, 754, 786
BspFNI CGCG 3 cut(s) 149, 151, 291
BspLI GGNNCC 5 cut(s) 168, 428, 434, 519, 805
BspPI GGATC 2 cut(s) 169, 460
BspT107I GGYRCC 1 cut(s) 517
BsrBI CCGCTC 1 cut(s) 489
BsrFI RCCGGY 1 cut(s) 429
BsrGI TGTACA 1 cut(s) 585
BssAI RCCGGY 1 cut(s) 429
BssECI CCNNGG 5 cut(s) 49, 72, 327, 573, 782
BssMI GATC 6 cut(s) 42, 174, 277, 452, 636, 820
BssNI GRCGYC 4 cut(s) 63, 93, 518, 561
BssT1I CCWWGG 2 cut(s) 72, 782
Bst2UI CCWGG 1 cut(s) 125
Bst4CI ACNGT 2 cut(s) 365, 507
BstACI GRCGYC 4 cut(s) 63, 93, 518, 561
BstAPI GCANNNNNTGC 1 cut(s) 346
BstAUI TGTACA 1 cut(s) 585
BstC8I GCNNGC 2 cut(s) 351, 597
BstDEI CTNAG 5 cut(s) 299, 633, 719, 762, 773
BstDSI CCRYGG 1 cut(s) 782
BstF5I GGATG 3 cut(s) 238, 408, 732
BstFNI CGCG 3 cut(s) 149, 151, 291
BstH2I RGCGCY 3 cut(s) 124, 521, 573
BstHHI GCGC 5 cut(s) 123, 151, 361, 520, 572
BstKTI GATC 6 cut(s) 45, 177, 280, 455, 639, 823
BstMAI GTCTC 3 cut(s) 443, 455, 700
BstMBI GATC 6 cut(s) 42, 174, 277, 452, 636, 820
BstMCI CGRYCG 2 cut(s) 49, 114
BstMWI GCNNNNNNNGC 2 cut(s) 148, 346
BstNI CCWGG 1 cut(s) 125
BstNSI RCATGY 1 cut(s) 265
BstSCI CCNGG 4 cut(s) 48, 123, 533, 572
BstUI CGCG 3 cut(s) 149, 151, 291
BstV1I GCAGC 2 cut(s) 310, 352
BstV2I GAAGAC 2 cut(s) 149, 618
BstX2I RGATCY 3 cut(s) 174, 277, 636
BstYI RGATCY 3 cut(s) 174, 277, 636
BstZI CGGCCG 1 cut(s) 46
BsuRI GGCC 7 cut(s) 48, 77, 128, 213, 353, 659, 806
BtgI CCRYGG 1 cut(s) 782
BtsCI GGATG 3 cut(s) 238, 408, 732
BtsI GCAGTG 1 cut(s) 654
BtsIMutI CAGTG 2 cut(s) 361, 654
Cac8I GCNNGC 2 cut(s) 351, 597
CfoI GCGC 5 cut(s) 123, 151, 361, 520, 572
Cfr10I RCCGGY 1 cut(s) 429
Cfr13I GGNCC 5 cut(s) 238, 253, 427, 657, 804
CseI GACGC 5 cut(s) 52, 155, 278, 280, 297
Csp6I GTAC 2 cut(s) 508, 586
CviAII CATG 4 cut(s) 262, 334, 346, 783
CviQI GTAC 2 cut(s) 508, 586
DdeI CTNAG 5 cut(s) 299, 633, 719, 762, 773
DinI GGCGCC 1 cut(s) 519
DpnI GATC 6 cut(s) 44, 176, 279, 454, 638, 822
DpnII GATC 6 cut(s) 42, 174, 277, 452, 636, 820
EaeI YGGCCR 1 cut(s) 46
EagI CGGCCG 1 cut(s) 46
EciI GGCGGA 1 cut(s) 473
EclXI CGGCCG 1 cut(s) 46
Eco130I CCWWGG 2 cut(s) 72, 782
Eco147I AGGCCT 1 cut(s) 77
Eco47I GGWCC 3 cut(s) 238, 253, 427
Eco52I CGGCCG 1 cut(s) 46
EcoRII CCWGG 1 cut(s) 123
EcoT14I CCWWGG 2 cut(s) 72, 782
EgeI GGCGCC 1 cut(s) 519
EheI GGCGCC 1 cut(s) 519
ErhI CCWWGG 2 cut(s) 72, 782
Esp3I CGTCTC 3 cut(s) 443, 455, 700
FaeI CATG 4 cut(s) 265, 337, 349, 786
FaqI GGGAC 3 cut(s) 66, 440, 514
FatI CATG 4 cut(s) 261, 333, 345, 782
FauNDI CATATG 1 cut(s) 249
FbaI TGATCA 1 cut(s) 820
Fnu4HI GCNGC 2 cut(s) 324, 341
FokI GGATG 3 cut(s) 245, 395, 739
Fsp4HI GCNGC 2 cut(s) 324, 341
FspBI CTAG 2 cut(s) 678, 747
FspI TGCGCA 1 cut(s) 360
GlaI GCGC 5 cut(s) 122, 150, 360, 519, 571
GluI GCNGC 2 cut(s) 324, 341
GsaI CCCAGC 1 cut(s) 427
GsuI CTGGAG 1 cut(s) 586
HaeII RGCGCY 3 cut(s) 124, 521, 573
HaeIII GGCC 7 cut(s) 48, 77, 128, 213, 353, 659, 806
HgaI GACGC 5 cut(s) 52, 155, 278, 280, 297
HhaI GCGC 5 cut(s) 123, 151, 361, 520, 572
Hin1I GRCGYC 4 cut(s) 63, 93, 518, 561
Hin1II CATG 4 cut(s) 265, 337, 349, 786
Hin6I GCGC 5 cut(s) 121, 149, 359, 518, 570
HinP1I GCGC 5 cut(s) 121, 149, 359, 518, 570
HinfI GANTC 5 cut(s) 57, 137, 492, 623, 753
HphI GGTGA 3 cut(s) 359, 377, 718
Hpy166II GTNNAC 1 cut(s) 559
Hpy188I TCNGA 3 cut(s) 287, 452, 776
Hpy188III TCNNGA 4 cut(s) 82, 115, 565, 747
Hpy8I GTNNAC 1 cut(s) 559
Hpy99I CGWCG 7 cut(s) 41, 68, 95, 149, 291, 422, 706
HpyAV CCTTC 4 cut(s) 88, 224, 547, 703
HpyCH4III ACNGT 2 cut(s) 365, 507
HpyCH4IV ACGT 4 cut(s) 93, 204, 464, 561
HpyCH4V TGCA 2 cut(s) 349, 652
HpyF10VI GCNNNNNNNGC 2 cut(s) 148, 346
HpyF3I CTNAG 5 cut(s) 299, 633, 719, 762, 773
HpySE526I ACGT 4 cut(s) 93, 204, 464, 561
Hsp92I GRCGYC 4 cut(s) 63, 93, 518, 561
Hsp92II CATG 4 cut(s) 265, 337, 349, 786
HspAI GCGC 5 cut(s) 121, 149, 359, 518, 570
KasI GGCGCC 1 cut(s) 517
Ksp22I TGATCA 1 cut(s) 820
Kzo9I GATC 6 cut(s) 42, 174, 277, 452, 636, 820
LmnI GCTCC 4 cut(s) 166, 438, 478, 567
Lsp1109I GCAGC 2 cut(s) 310, 352
LweI GCATC 1 cut(s) 717
MaeI CTAG 2 cut(s) 678, 747
MaeII ACGT 4 cut(s) 93, 204, 464, 561
MaeIII GTNAC 4 cut(s) 266, 292, 365, 814
MalI GATC 6 cut(s) 44, 176, 279, 454, 638, 822
MbiI CCGCTC 1 cut(s) 489
MboI GATC 6 cut(s) 42, 174, 277, 452, 636, 820
MboII GAAGA 4 cut(s) 149, 184, 618, 762
MflI RGATCY 3 cut(s) 174, 277, 636
MluCI AATT 1 cut(s) 661
MluI ACGCGT 1 cut(s) 289
Mly113I GGCGCC 1 cut(s) 518
MlyI GAGTC 3 cut(s) 131, 501, 632
MmeI TCCRAC 1 cut(s) 310
MseI TTAA 2 cut(s) 396, 826
MslI CAYNNNNRTG 1 cut(s) 812
MspA1I CMGCKG 1 cut(s) 812
MspR9I CCNGG 4 cut(s) 50, 125, 535, 574
MvaI CCWGG 1 cut(s) 125
MvnI CGCG 3 cut(s) 149, 151, 291
MwoI GCNNNNNNNGC 2 cut(s) 148, 346
NarI GGCGCC 1 cut(s) 518
NciI CCSGG 3 cut(s) 50, 535, 574
NcoI CCATGG 1 cut(s) 782
NdeI CATATG 1 cut(s) 249
NdeII GATC 6 cut(s) 42, 174, 277, 452, 636, 820
NlaIII CATG 4 cut(s) 265, 337, 349, 786
NlaIV GGNNCC 5 cut(s) 168, 428, 434, 519, 805
NmeAIII GCCGAG 3 cut(s) 337, 354, 737
NmuCI GTSAC 4 cut(s) 266, 292, 365, 814
NsbI TGCGCA 1 cut(s) 360
NspI RCATGY 1 cut(s) 265
OliI CACNNNNGTG 1 cut(s) 812
PceI AGGCCT 1 cut(s) 77
PciI ACATGT 1 cut(s) 261
PcsI WCGNNNNNNNCGW 2 cut(s) 99, 461
PfeI GAWTC 2 cut(s) 57, 753
PkrI GCNGC 2 cut(s) 325, 342
PleI GAGTC 3 cut(s) 131, 500, 631
PluTI GGCGCC 1 cut(s) 521
PpsI GAGTC 3 cut(s) 131, 500, 631
PscI ACATGT 1 cut(s) 261
Psp1406I AACGTT 1 cut(s) 204
Psp6I CCWGG 1 cut(s) 123
PspFI CCCAGC 1 cut(s) 423
PspGI CCWGG 1 cut(s) 123
PspN4I GGNNCC 5 cut(s) 168, 428, 434, 519, 805
PspPI GGNCC 5 cut(s) 238, 253, 427, 657, 804
PsuI RGATCY 3 cut(s) 174, 277, 636
PvuII CAGCTG 1 cut(s) 812
RsaI GTAC 2 cut(s) 509, 587
RsaNI GTAC 2 cut(s) 508, 586
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 2 cut(s) 396, 826
SatI GCNGC 2 cut(s) 324, 341
Sau3AI GATC 6 cut(s) 42, 174, 277, 452, 636, 820
Sau96I GGNCC 5 cut(s) 238, 253, 427, 657, 804
SchI GAGTC 3 cut(s) 131, 501, 632
ScrFI CCNGG 4 cut(s) 50, 125, 535, 574
SfaNI GCATC 1 cut(s) 717
SfoI GGCGCC 1 cut(s) 519
SinI GGWCC 3 cut(s) 238, 253, 427
SmiMI CAYNNNNRTG 1 cut(s) 812
Sse9I AATT 1 cut(s) 661
SseBI AGGCCT 1 cut(s) 77
SsiI CCGC 3 cut(s) 151, 458, 489
SspDI GGCGCC 1 cut(s) 517
SspMI CTAG 2 cut(s) 678, 747
StuI AGGCCT 1 cut(s) 77
StyD4I CCNGG 4 cut(s) 48, 123, 533, 572
StyI CCWWGG 2 cut(s) 72, 782
TaaI ACNGT 2 cut(s) 365, 507
TaiI ACGT 4 cut(s) 96, 207, 467, 564
TaqI TCGA 4 cut(s) 114, 144, 258, 417
TaqII GACCGA 2 cut(s) 100, 319
TasI AATT 1 cut(s) 661
TatI WGTACW 1 cut(s) 585
TfiI GAWTC 2 cut(s) 57, 753
Tru1I TTAA 2 cut(s) 396, 826
Tru9I TTAA 2 cut(s) 396, 826
TscAI CASTG 2 cut(s) 368, 654
TseFI GTSAC 4 cut(s) 266, 292, 365, 814
TseI GCWGC 2 cut(s) 323, 340
Tsp45I GTSAC 4 cut(s) 266, 292, 365, 814
TspGWI ACGGA 3 cut(s) 179, 425, 682
TspRI CASTG 2 cut(s) 368, 654
VpaK11BI GGWCC 3 cut(s) 238, 253, 427
XbaI TCTAGA 1 cut(s) 746
XceI RCATGY 1 cut(s) 265
XspI CTAG 2 cut(s) 678, 747
ZraI GACGTC 2 cut(s) 94, 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.