pycom12g22590
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
23441057 .. 23442004
948 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g22590.2

Sequence Viewer

Length: 645 bp
ATGACCCTTTTGTCATCTCATCCCAACGTTCTCAAGCTCTTTAACGTCTTCGAGACCGAGGACTCGCTCGCGATGGTGCTCGAGCTCTGCGAGCAGGAAACACTCTACGACCGGGTCGTGGAGCGCACGCTCTCGGAGCCCGAGGCCGCCGCGATCATGAAGCAGCTGCTTGAGGCCGTCTCGCATTGCCACCGCCTCGGGGTGGTTCATAGGGATTTGAAGCCGGAGAATGTTCTGTTTGATTCGAGGAACAATTTGAAGCTCGCGGATTTCGGGTCGGCGGAGTGGGCCGGCGACGGCGGGGTCATGGAGGGCGTGGTCGGGACGCCATACTACGTTGCGCCCGAGGTGCTGATGGGCAGGGAGTACGATGAGAAGATCGATGTTTGGAGCGCCGGCGTGATGATGTACATAATGCTCAGCGGGATTCCGCCGTTTTACGGCGAGTCGGCGACGGAGATCTTCCAGGCGGTTTTGCGAGGGAATTTGAGATTTCCGCCGAAGGTCTTCCGATCTGTATCGCCGGCGGCGAAGGATCTGCTGAGGAAGATGATTTCCAGAGACGTTTCCAGAAGGCTTTCTGCTGACCAGGCACTTAGGCACCCATGGATCTTAAGTGGTGGAGAAGCAAATCCAATTGACTAA

Protein Analysis

215

Amino Acids

23.92

Weight (kDa)

5.2

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 10, 302
AccB1I GGYRCC 1 cut(s) 600
AccII CGCG 3 cut(s) 71, 152, 266
AclI AACGTT 1 cut(s) 27
AclWI GGATC 2 cut(s) 543, 617
AcsI RAATTY 1 cut(s) 484
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 2 cut(s) 368, 410
AfiI CCNNNNNNNGG 4 cut(s) 118, 199, 202, 440
AflII CTTAAG 1 cut(s) 613
AgsI TTSAA 2 cut(s) 220, 259
AjnI CCWGG 2 cut(s) 465, 588
AluBI AGCT 4 cut(s) 37, 85, 166, 262
AluI AGCT 4 cut(s) 37, 85, 166, 262
Alw21I GWGCWC 2 cut(s) 81, 87
Alw26I GTCTC 3 cut(s) 47, 184, 555
AlwI GGATC 2 cut(s) 543, 617
Ama87I CYCGRG 4 cut(s) 80, 140, 197, 344
AoxI GGCC 3 cut(s) 144, 174, 288
ApeKI GCWGC 2 cut(s) 163, 166
ApoI RAATTY 1 cut(s) 484
Asp700I GAANNNNTTC 2 cut(s) 506, 577
AspLEI GCGC 3 cut(s) 126, 343, 395
AspS9I GGNCC 1 cut(s) 288
AsuC2I CCSGG 1 cut(s) 113
AvaI CYCGRG 4 cut(s) 80, 140, 197, 344
BanI GGYRCC 1 cut(s) 600
BanII GRGCYC 2 cut(s) 87, 141
BbsI GAAGAC 2 cut(s) 40, 499
Bbv12I GWGCWC 2 cut(s) 81, 87
BbvCI CCTCAGC 1 cut(s) 542
BbvI GCAGC 2 cut(s) 153, 175
BccI CCATC 2 cut(s) 67, 349
BceAI ACGGC 4 cut(s) 161, 313, 418, 457
BcgI CGANNNNNNTGC 2 cut(s) 520, 554
BciT130I CCWGG 2 cut(s) 467, 590
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 3 cut(s) 47, 184, 555
BfoI RGCGCY 1 cut(s) 396
BfrI CTTAAG 1 cut(s) 613
BglII AGATCT 1 cut(s) 459
BisI GCNGC 5 cut(s) 147, 150, 164, 167, 528
BlpI GCTNAGC 1 cut(s) 419
BlsI GCNGC 5 cut(s) 148, 151, 165, 168, 529
Bme1390I CCNGG 3 cut(s) 113, 467, 590
BmeT110I CYCGRG 4 cut(s) 80, 140, 197, 344
BmgT120I GGNCC 1 cut(s) 288
BmiI GGNNCC 2 cut(s) 138, 602
BmrFI CCNGG 3 cut(s) 113, 467, 590
BpiI GAAGAC 2 cut(s) 40, 499
BplI GAGNNNNNCTC 2 cut(s) 164, 196
Bpu10I CCTNAGC 1 cut(s) 542
Bpu1102I GCTNAGC 1 cut(s) 419
BpuEI CTTGAG 2 cut(s) 17, 191
BpuMI CCSGG 1 cut(s) 113
Bsa29I ATCGAT 1 cut(s) 381
BsaBI GATNNNNATC 1 cut(s) 517
BsaHI GRCGYC 1 cut(s) 326
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 5 cut(s) 57, 141, 196, 345, 605
Bsc4I CCNNNNNNNGG 4 cut(s) 118, 199, 202, 440
Bse118I RCCGGY 3 cut(s) 290, 395, 523
Bse3DI GCAATG 1 cut(s) 184
Bse8I GATNNNNATC 1 cut(s) 517
BseBI CCWGG 2 cut(s) 467, 590
BseCI ATCGAT 1 cut(s) 381
BseDI CCNNGG 5 cut(s) 57, 141, 196, 345, 605
BseGI GGATG 1 cut(s) 19
BseJI GATNNNNATC 1 cut(s) 517
BseLI CCNNNNNNNGG 4 cut(s) 118, 199, 202, 440
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 2 cut(s) 433, 533
BseXI GCAGC 2 cut(s) 153, 175
Bsh1236I CGCG 3 cut(s) 71, 152, 266
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 3 cut(s) 146, 176, 290
BshNI GGYRCC 1 cut(s) 600
BshVI ATCGAT 1 cut(s) 381
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 2 cut(s) 81, 87
BsiHKCI CYCGRG 4 cut(s) 80, 140, 197, 344
BsiSI CCGG 5 cut(s) 112, 224, 291, 396, 524
BslFI GGGAC 1 cut(s) 337
BslI CCNNNNNNNGG 4 cut(s) 118, 199, 202, 440
BsmAI GTCTC 3 cut(s) 47, 184, 555
BsmBI CGTCTC 2 cut(s) 184, 555
BsmFI GGGAC 1 cut(s) 337
BsnI GGCC 3 cut(s) 146, 176, 290
Bso31I GGTCTC 1 cut(s) 47
BsoBI CYCGRG 4 cut(s) 80, 140, 197, 344
Bsp1286I GDGCHC 3 cut(s) 81, 87, 141
Bsp1407I TGTACA 1 cut(s) 408
Bsp143I GATC 6 cut(s) 153, 378, 459, 512, 535, 609
Bsp1720I GCTNAGC 1 cut(s) 419
Bsp19I CCATGG 1 cut(s) 605
Bsp68I TCGCGA 1 cut(s) 71
BspANI GGCC 3 cut(s) 146, 176, 290
BspCNI CTCAG 2 cut(s) 432, 534
BspDI ATCGAT 1 cut(s) 381
BspFNI CGCG 3 cut(s) 71, 152, 266
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 2 cut(s) 138, 602
BspPI GGATC 2 cut(s) 543, 617
BspT107I GGYRCC 1 cut(s) 600
BspTI CTTAAG 1 cut(s) 613
BspTNI GGTCTC 1 cut(s) 47
BsrDI GCAATG 1 cut(s) 184
BsrFI RCCGGY 3 cut(s) 290, 395, 523
BsrGI TGTACA 1 cut(s) 408
BssAI RCCGGY 3 cut(s) 290, 395, 523
BssECI CCNNGG 5 cut(s) 57, 141, 196, 345, 605
BssMI GATC 6 cut(s) 153, 378, 459, 512, 535, 609
BssNI GRCGYC 1 cut(s) 326
BssT1I CCWWGG 1 cut(s) 605
Bst2UI CCWGG 2 cut(s) 467, 590
BstACI GRCGYC 1 cut(s) 326
BstAFI CTTAAG 1 cut(s) 613
BstAUI TGTACA 1 cut(s) 408
BstC8I GCNNGC 7 cut(s) 69, 92, 128, 264, 292, 397, 525
BstDEI CTNAG 3 cut(s) 419, 542, 596
BstDSI CCRYGG 1 cut(s) 605
BstF5I GGATG 1 cut(s) 19
BstFNI CGCG 3 cut(s) 71, 152, 266
BstH2I RGCGCY 1 cut(s) 396
BstHHI GCGC 3 cut(s) 126, 343, 395
BstKTI GATC 6 cut(s) 156, 381, 462, 515, 538, 612
BstMAI GTCTC 3 cut(s) 47, 184, 555
BstMBI GATC 6 cut(s) 153, 378, 459, 512, 535, 609
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 5 cut(s) 91, 136, 287, 349, 590
BstNI CCWGG 2 cut(s) 467, 590
BstSCI CCNGG 3 cut(s) 111, 465, 588
BstUI CGCG 3 cut(s) 71, 152, 266
BstV1I GCAGC 2 cut(s) 153, 175
BstV2I GAAGAC 2 cut(s) 40, 499
BstX2I RGATCY 3 cut(s) 459, 535, 609
BstYI RGATCY 3 cut(s) 459, 535, 609
Bsu15I ATCGAT 1 cut(s) 381
BsuRI GGCC 3 cut(s) 146, 176, 290
BsuTUI ATCGAT 1 cut(s) 381
BtgI CCRYGG 1 cut(s) 605
BtgZI GCGATG 1 cut(s) 86
BtsCI GGATG 1 cut(s) 19
BtuMI TCGCGA 1 cut(s) 71
Cac8I GCNNGC 7 cut(s) 69, 92, 128, 264, 292, 397, 525
CciI TCATGA 1 cut(s) 156
CfoI GCGC 3 cut(s) 126, 343, 395
Cfr10I RCCGGY 3 cut(s) 290, 395, 523
Cfr13I GGNCC 1 cut(s) 288
ClaI ATCGAT 1 cut(s) 381
CseI GACGC 1 cut(s) 334
Csp6I GTAC 2 cut(s) 367, 409
CviAII CATG 3 cut(s) 157, 307, 606
CviQI GTAC 2 cut(s) 367, 409
DdeI CTNAG 3 cut(s) 419, 542, 596
DpnI GATC 6 cut(s) 155, 380, 461, 514, 537, 611
DpnII GATC 6 cut(s) 153, 378, 459, 512, 535, 609
DrdI GACNNNNNNGTC 2 cut(s) 10, 302
DseDI GACNNNNNNGTC 2 cut(s) 10, 302
EciI GGCGGA 3 cut(s) 296, 420, 486
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 605
Eco24I GRGCYC 2 cut(s) 87, 141
Eco31I GGTCTC 1 cut(s) 47
Eco53kI GAGCTC 1 cut(s) 85
Eco88I CYCGRG 4 cut(s) 80, 140, 197, 344
EcoICRI GAGCTC 1 cut(s) 85
EcoRII CCWGG 2 cut(s) 465, 588
EcoT14I CCWWGG 1 cut(s) 605
EcoT38I GRGCYC 2 cut(s) 87, 141
ErhI CCWWGG 1 cut(s) 605
Esp3I CGTCTC 2 cut(s) 184, 555
FaeI CATG 3 cut(s) 160, 310, 609
FaiI YATR 6 cut(s) 158, 210, 308, 331, 413, 607
FaqI GGGAC 1 cut(s) 337
FatI CATG 3 cut(s) 156, 306, 605
FauI CCCGC 2 cut(s) 293, 416
Fnu4HI GCNGC 5 cut(s) 147, 150, 164, 167, 528
FokI GGATG 1 cut(s) 6
FriOI GRGCYC 2 cut(s) 87, 141
Fsp4HI GCNGC 5 cut(s) 147, 150, 164, 167, 528
GlaI GCGC 3 cut(s) 125, 342, 394
GluI GCNGC 5 cut(s) 147, 150, 164, 167, 528
HaeII RGCGCY 1 cut(s) 396
HaeIII GGCC 3 cut(s) 146, 176, 290
HapII CCGG 5 cut(s) 112, 224, 291, 396, 524
HgaI GACGC 1 cut(s) 334
HhaI GCGC 3 cut(s) 126, 343, 395
Hin1I GRCGYC 1 cut(s) 326
Hin1II CATG 3 cut(s) 160, 310, 609
Hin6I GCGC 3 cut(s) 124, 341, 393
HinP1I GCGC 3 cut(s) 124, 341, 393
HinfI GANTC 4 cut(s) 62, 242, 427, 446
HpaII CCGG 5 cut(s) 112, 224, 291, 396, 524
Hpy188I TCNGA 2 cut(s) 136, 512
Hpy188III TCNNGA 6 cut(s) 52, 70, 157, 322, 558, 570
Hpy99I CGWCG 2 cut(s) 299, 457
HpyAV CCTTC 3 cut(s) 496, 526, 567
HpyCH4IV ACGT 4 cut(s) 27, 45, 336, 564
HpyF10VI GCNNNNNNNGC 5 cut(s) 91, 136, 287, 349, 590
HpyF3I CTNAG 3 cut(s) 419, 542, 596
HpySE526I ACGT 4 cut(s) 27, 45, 336, 564
Hsp92I GRCGYC 1 cut(s) 326
Hsp92II CATG 3 cut(s) 160, 310, 609
HspAI GCGC 3 cut(s) 124, 341, 393
KroI GCCGGC 3 cut(s) 290, 395, 523
KroNI GCCGGC 3 cut(s) 292, 397, 525
Kzo9I GATC 6 cut(s) 153, 378, 459, 512, 535, 609
LmnI GCTCC 3 cut(s) 121, 136, 390
Lsp1109I GCAGC 2 cut(s) 153, 175
MaeII ACGT 4 cut(s) 27, 45, 336, 564
MalI GATC 6 cut(s) 155, 380, 461, 514, 537, 611
MboI GATC 6 cut(s) 153, 378, 459, 512, 535, 609
MboII GAAGA 5 cut(s) 40, 388, 454, 499, 559
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 3 cut(s) 459, 535, 609
MhlI GDGCHC 3 cut(s) 81, 87, 141
MluCI AATT 3 cut(s) 253, 484, 636
MlyI GAGTC 2 cut(s) 56, 455
MnlI CCTC 9 cut(s) 52, 136, 166, 206, 240, 304, 340, 473, 537
MreI CGCCGGCG 2 cut(s) 395, 523
MroNI GCCGGC 3 cut(s) 290, 395, 523
MroXI GAANNNNTTC 2 cut(s) 506, 577
MseI TTAA 2 cut(s) 42, 614
MspA1I CMGCKG 2 cut(s) 166, 423
MspCI CTTAAG 1 cut(s) 613
MspI CCGG 5 cut(s) 112, 224, 291, 396, 524
MspR9I CCNGG 3 cut(s) 113, 467, 590
MunI CAATTG 1 cut(s) 636
MvaI CCWGG 2 cut(s) 467, 590
MvnI CGCG 3 cut(s) 71, 152, 266
MwoI GCNNNNNNNGC 5 cut(s) 91, 136, 287, 349, 590
NaeI GCCGGC 3 cut(s) 292, 397, 525
NciI CCSGG 1 cut(s) 113
NcoI CCATGG 1 cut(s) 605
NdeII GATC 6 cut(s) 153, 378, 459, 512, 535, 609
NgoMIV GCCGGC 3 cut(s) 290, 395, 523
NlaIII CATG 3 cut(s) 160, 310, 609
NlaIV GGNNCC 2 cut(s) 138, 602
NruI TCGCGA 1 cut(s) 71
PaeR7I CTCGAG 1 cut(s) 80
PagI TCATGA 1 cut(s) 156
PcsI WCGNNNNNNNCGW 4 cut(s) 87, 114, 342, 527
PdiI GCCGGC 3 cut(s) 292, 397, 525
PdmI GAANNNNTTC 2 cut(s) 506, 577
PfeI GAWTC 2 cut(s) 242, 427
PflFI GACNNNGTC 1 cut(s) 113
PkrI GCNGC 5 cut(s) 148, 151, 165, 168, 529
PleI GAGTC 2 cut(s) 56, 454
PpsI GAGTC 2 cut(s) 56, 454
Psp124BI GAGCTC 1 cut(s) 87
Psp1406I AACGTT 1 cut(s) 27
Psp6I CCWGG 2 cut(s) 465, 588
PspGI CCWGG 2 cut(s) 465, 588
PspN4I GGNNCC 2 cut(s) 138, 602
PspPI GGNCC 1 cut(s) 288
PspXI VCTCGAGB 1 cut(s) 80
PsuI RGATCY 3 cut(s) 459, 535, 609
PsyI GACNNNGTC 1 cut(s) 113
PvuII CAGCTG 1 cut(s) 166
RruI TCGCGA 1 cut(s) 71
RsaI GTAC 2 cut(s) 368, 410
RsaNI GTAC 2 cut(s) 367, 409
SacI GAGCTC 1 cut(s) 87
SaqAI TTAA 2 cut(s) 42, 614
SatI GCNGC 5 cut(s) 147, 150, 164, 167, 528
Sau3AI GATC 6 cut(s) 153, 378, 459, 512, 535, 609
Sau96I GGNCC 1 cut(s) 288
SchI GAGTC 2 cut(s) 56, 455
ScrFI CCNGG 3 cut(s) 113, 467, 590
SduI GDGCHC 3 cut(s) 81, 87, 141
Sfr274I CTCGAG 1 cut(s) 80
SgrAI CRCCGGYG 2 cut(s) 395, 523
SlaI CTCGAG 1 cut(s) 80
SmlI CTYRAG 4 cut(s) 32, 80, 170, 613
SmoI CTYRAG 4 cut(s) 32, 80, 170, 613
Sse9I AATT 3 cut(s) 253, 484, 636
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 3 cut(s) 111, 465, 588
StyI CCWWGG 1 cut(s) 605
TaiI ACGT 4 cut(s) 30, 48, 339, 567
TaqI TCGA 4 cut(s) 51, 81, 245, 381
TaqII GACCGA 1 cut(s) 71
TasI AATT 3 cut(s) 253, 484, 636
TatI WGTACW 1 cut(s) 408
TauI GCSGC 3 cut(s) 149, 152, 530
TfiI GAWTC 2 cut(s) 242, 427
Tru1I TTAA 2 cut(s) 42, 614
Tru9I TTAA 2 cut(s) 42, 614
TseI GCWGC 2 cut(s) 163, 166
TspDTI ATGAA 2 cut(s) 173, 197
TspGWI ACGGA 1 cut(s) 470
Tth111I GACNNNGTC 1 cut(s) 113
Vha464I CTTAAG 1 cut(s) 613
XapI RAATTY 1 cut(s) 484
XhoI CTCGAG 1 cut(s) 80
XmnI GAANNNNTTC 2 cut(s) 506, 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.