Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002787

Physical Location & Seq

Genomic Coordinates Reverse (-)

3704888 .. 3710167

Gene Structure 5280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g04320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGATTCGGATCAGGGGAAGCTTTTCATCGGCGGGATATCGTGGGAGACGTCGGAGGATAAGCTGAAGGAGTACTTCAGCAATTACGGCGACGTTTTGCAGACGGTGGTTATGAGAGACAAGATCACTCAGAGACCCAGAGGTTTTGGGTTCGTCGTCTTTGTGGATCCTGCTGTTCTTGATAGGGTTCTTCAGGAGAAGCATACCATCGATGGCAGGACGGTTGAAGCTAAGAGGGCCCTCTCAAGAGAGGAGCAGCAAACTTCTGTCAGAGCAGGAAATCCCAATCCTGGTAGAAATGTGGGAAGCGGTGGAAATGTTAGGACCAAGAAGATATTTGTTGGTGGGCTGCCTCCCACTCTAAATGAAGAAGAGTTCCGTGAATATTTTGAAGCTTATGGCCATGTAACAGATGTAGTTGTAATGTTTGACCAAAATACTGGACGACCTCGTGGATTTGGATTTATTTCATTTGACACTGAAGATGCAGTAGATAGGGTTTTGCACAAGACATTTCATGATTTAAGTGGTAAGCAAGTGGAAGTAAAGAGGGCTCTTCCCAAAGATGCCAACCCTGGTGGTGGTGGCCGTTCCATGGGGGGTGGTCAGGGTGGCGGTGGTGCATCTGGTGGTGGTTACCAAGGCTATGGAACATCTGGTGGGAACCCAAATGCATATGATGGTCGAATGGACTCGAACAGGTACATGCAATCTCAGAGCACTGGTGGTGGTTTTCCTCCTTATGGTTCTTCGGGGTATAGTGCACCCAGTTATGGGTATGCTCCTTCCAGTAATGGCATTGGTTATGGAGGCTATGGAGGTTATGGTGGTACCAATACTGGATATGGTGGTCCAGCCGCTGCCGCCTATGGAAACCCTAATGCCCCAAATGCTGGTTATGGTGGTGGCCCACCAGGTGCTCCTAGAAGTTCATGGAGCTCCCAAGCACCCGCAGGATATGGTGGTATGGGATACGGCAATACCGCTCCTTGGGGTGTTCAAAGCGGCAGTGCAGCTGCAGGAGGTGGTGGTCCTGGATCTGCACCTGCTGGTCAATCTCCTAGTGCAGCGGCTGGGTACGGAGCTCAAGGTTATGGTTATGGTGGGTACAGTGGAGGTGATGCATCCTATGGAAATCCATCTGCATATGGTGCAGTTGGAGGGCGTTCTGGGAGTGTCCCAAATAACAATGTTGGTGGTCCTGGTGGGGAGCAAGGTAGTGGTGGTGGATACATCGGAAGTGGCTATGGCGACTCAAATGGAAATGCAGGTTATGGAAATTCTGGTTGGAGAGCAGACCCATCACAAGCTTCTGGAAACTATGGTGGTCAGGCTAATGGCGCTCATGGCGGGCAAGTTGGCTATGGTGGGTATAGCAGTGCTCAGGCACGACAAGCCCAGCAGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010228 GO:0010467 GO:0016070 GO:0016071 GO:0022414 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0047484 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0080134 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:1901000 GO:1901360 GO:1901363 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

470

Amino Acids

47.36

Weight (kDa)

6.54

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	8 - 74	3.3e-14	RNA recognition motif
RRM_7	PF16367	110 - 176	2.2e-06	RNA recognition motif
RRM_1	PF00076	112 - 169	3.2e-16	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14300 AT4G14300
fragaria_vesca	FvH4_2g20810 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320
malus_domestica	MD05G1191700.v1.1 MD13G1219200.v1.1 MD16G1224500.v1.1
prunus_persica	Prupe.1G045900_v2.0.a1 Prupe.1G045900_v2.0.a1 Prupe.8G218100_v2.0.a1
pyrus_communis	pycom05g17830 pycom05g17870 pycom10g15490 pycom13g19410 pycom16g18790
rosa_chinensis	RchiOBHm_Chr4g0394771 RchiOBHm_Chr6g0287221
rosa_laevigata	RLG00000009663 RLG00000012517
rosa_multiflora	Rmu_sc0005297.1_g000024 Rmu_sc0005356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00339810 Rroxscaffold_7G00181660
rosa_rugosa	Rorug03G0361600.1 Rorug06G0185900
rosa_samantha	Rh4AG055000 Rh4BG052900 Rh4CG059700 Rh4DG051400 Rh6AG297400 Rh6BG302800 Rh6CG307300 Rh6CG310700 Rh6DG294400
rosa_wichuraiana	Rw4G004390 Rw6G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1054
AatII	GACGTC	1 cut(s)	53
Acc36I	ACCTGC	2 cut(s)	1054, 1259
Acc65I	GGTACC	1 cut(s)	830
AccB1I	GGYRCC	1 cut(s)	830
AccB7I	CCANNNNNTGG	1 cut(s)	893
AccBSI	CCGCTC	1 cut(s)	986
AclWI	GGATC	4 cut(s)	18, 161, 174, 1045
AcoI	YGGCCR	2 cut(s)	400, 586
AcsI	RAATTY	1 cut(s)	1279
AcuI	CTGAAG	4 cut(s)	61, 86, 176, 501
AcyI	GRCGYC	1 cut(s)	50
AdeI	CACNNNGTG	1 cut(s)	917
AfaI	GTAC	5 cut(s)	74, 704, 832, 1079, 1109
AfiI	CCNNNNNNNGG	8 cut(s)	290, 581, 595, 743, 773, 774, 893, 990
AgsI	TTSAA	3 cut(s)	227, 392, 1001
AjnI	CCWGG	5 cut(s)	289, 574, 913, 1033, 1201
AjuI	GAANNNNNNNTTGG	2 cut(s)	1270, 1302
AluBI	AGCT	8 cut(s)	22, 64, 230, 395, 939, 1016, 1085, 1310
AluI	AGCT	8 cut(s)	22, 64, 230, 395, 939, 1016, 1085, 1310
Alw21I	GWGCWC	6 cut(s)	722, 766, 922, 941, 1087, 1384
Alw26I	GTCTC	3 cut(s)	41, 111, 127
Alw44I	GTGCAC	1 cut(s)	762
AlwI	GGATC	4 cut(s)	18, 161, 174, 1045
AlwNI	CAGNNNCTG	2 cut(s)	860, 1073
AoxI	GGCC	4 cut(s)	237, 400, 586, 907
ApaI	GGGCCC	1 cut(s)	241
ApaLI	GTGCAC	1 cut(s)	762
ApeKI	GCWGC	7 cut(s)	256, 349, 860, 1013, 1016, 1067, 1402
ApoI	RAATTY	1 cut(s)	1279
Asp700I	GAANNNNTTC	1 cut(s)	23
Asp718I	GGTACC	1 cut(s)	830
AspLEI	GCGC	1 cut(s)	1343
AspS9I	GGNCC	7 cut(s)	237, 238, 324, 851, 908, 1031, 1199
AsuHPI	GGTGA	1 cut(s)	1130
AvaII	GGWCC	4 cut(s)	324, 851, 1031, 1199
BaeGI	GKGCMC	2 cut(s)	241, 766
BalI	TGGCCA	1 cut(s)	402
BamHI	GGATCC	1 cut(s)	166
BanI	GGYRCC	1 cut(s)	830
BanII	GRGCYC	4 cut(s)	241, 556, 941, 1087
BauI	CACGAG	1 cut(s)	450
Bbv12I	GWGCWC	6 cut(s)	722, 766, 922, 941, 1087, 1384
BbvI	GCAGC	6 cut(s)	268, 336, 847, 1003, 1025, 1079
BccI	CCATC	5 cut(s)	206, 215, 674, 1147, 1309
BceAI	ACGGC	3 cut(s)	103, 573, 991
BciT130I	CCWGG	5 cut(s)	291, 576, 915, 1035, 1203
BciVI	GTATCC	2 cut(s)	965, 1223
BcoDI	GTCTC	3 cut(s)	41, 111, 127
BfaI	CTAG	2 cut(s)	924, 1062
BfmI	CTRYAG	1 cut(s)	1017
BfoI	RGCGCY	1 cut(s)	1344
BfuAI	ACCTGC	2 cut(s)	1054, 1259
BfuI	GTATCC	2 cut(s)	965, 1223
BmcAI	AGTACT	1 cut(s)	74
Bme1390I	CCNGG	5 cut(s)	291, 576, 915, 1035, 1203
Bme18I	GGWCC	4 cut(s)	324, 851, 1031, 1199
BmgT120I	GGNCC	7 cut(s)	237, 238, 324, 851, 908, 1031, 1199
BmiI	GGNNCC	4 cut(s)	168, 239, 665, 832
BmrFI	CCNGG	5 cut(s)	291, 576, 915, 1035, 1203
BmrI	ACTGGG	1 cut(s)	762
BmsI	GCATC	5 cut(s)	475, 556, 632, 1111, 1133
BmuI	ACTGGG	1 cut(s)	762
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuEI	CTTGAG	2 cut(s)	229, 1071
Bsa29I	ATCGAT	1 cut(s)	210
BsaBI	GATNNNNATC	1 cut(s)	9
BsaHI	GRCGYC	1 cut(s)	50
BsaI	GGTCTC	1 cut(s)	127
BsaJI	CCNNGG	4 cut(s)	574, 594, 640, 989
Bsc4I	CCNNNNNNNGG	8 cut(s)	290, 581, 595, 743, 773, 774, 893, 990
Bse1I	ACTGG	5 cut(s)	445, 727, 768, 789, 844
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	5 cut(s)	291, 576, 915, 1035, 1203
BseCI	ATCGAT	1 cut(s)	210
BseDI	CCNNGG	4 cut(s)	574, 594, 640, 989
BseGI	GGATG	1 cut(s)	1124
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	8 cut(s)	290, 581, 595, 743, 773, 774, 893, 990
BseMII	CTCAG	3 cut(s)	143, 728, 1397
BseNI	ACTGG	5 cut(s)	445, 727, 768, 789, 844
BseRI	GAGGAG	1 cut(s)	266
BseSI	GKGCMC	2 cut(s)	241, 766
BseXI	GCAGC	6 cut(s)	268, 336, 847, 1003, 1025, 1079
BseYI	CCCAGC	2 cut(s)	1073, 1398
BsgI	GTGCAG	4 cut(s)	1026, 1032, 1086, 1173
BshFI	GGCC	4 cut(s)	239, 402, 588, 909
BshNI	GGYRCC	1 cut(s)	830
BshVI	ATCGAT	1 cut(s)	210
BsiHKAI	GWGCWC	6 cut(s)	722, 766, 922, 941, 1087, 1384
BslFI	GGGAC	1 cut(s)	1163
BslI	CCNNNNNNNGG	8 cut(s)	290, 581, 595, 743, 773, 774, 893, 990
BsmAI	GTCTC	3 cut(s)	41, 111, 127
BsmBI	CGTCTC	1 cut(s)	41
BsmFI	GGGAC	1 cut(s)	1163
BsnI	GGCC	4 cut(s)	239, 402, 588, 909
Bso31I	GGTCTC	1 cut(s)	127
Bsp120I	GGGCCC	1 cut(s)	237
Bsp1286I	GDGCHC	8 cut(s)	241, 556, 722, 766, 922, 941, 1087, 1384
Bsp143I	GATC	4 cut(s)	10, 123, 166, 1037
Bsp19I	CCATGG	1 cut(s)	594
BspANI	GGCC	4 cut(s)	239, 402, 588, 909
BspCNI	CTCAG	3 cut(s)	142, 727, 1396
BspDI	ATCGAT	1 cut(s)	210
BspHI	TCATGA	1 cut(s)	517
BspLI	GGNNCC	4 cut(s)	168, 239, 665, 832
BspMAI	CTGCAG	1 cut(s)	1021
BspMI	ACCTGC	2 cut(s)	1054, 1259
BspPI	GGATC	4 cut(s)	18, 161, 174, 1045
BspQI	GCTCTTC	1 cut(s)	561
BspT107I	GGYRCC	1 cut(s)	830
BspTNI	GGTCTC	1 cut(s)	127
BsrBI	CCGCTC	1 cut(s)	986
BsrI	ACTGG	5 cut(s)	445, 727, 768, 789, 844
BssECI	CCNNGG	4 cut(s)	574, 594, 640, 989
BssMI	GATC	4 cut(s)	10, 123, 166, 1037
BssNI	GRCGYC	1 cut(s)	50
BssSI	CACGAG	1 cut(s)	450
BssT1I	CCWWGG	3 cut(s)	594, 640, 989
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	5 cut(s)	291, 576, 915, 1035, 1203
Bst4CI	ACNGT	3 cut(s)	106, 223, 1112
Bst6I	CTCTTC	2 cut(s)	366, 561
BstACI	GRCGYC	1 cut(s)	50
BstAPI	GCANNNNNTGC	1 cut(s)	1151
BstC8I	GCNNGC	1 cut(s)	1352
BstDEI	CTNAG	4 cut(s)	129, 231, 714, 1383
BstDSI	CCRYGG	1 cut(s)	594
BstEII	GGTNACC	1 cut(s)	635
BstF5I	GGATG	1 cut(s)	1124
BstH2I	RGCGCY	1 cut(s)	1344
BstHHI	GCGC	1 cut(s)	1343
BstKTI	GATC	4 cut(s)	13, 126, 169, 1040
BstMAI	GTCTC	3 cut(s)	41, 111, 127
BstMBI	GATC	4 cut(s)	10, 123, 166, 1037
BstMWI	GCNNNNNNNGC	8 cut(s)	87, 236, 863, 890, 1151, 1340, 1347, 1394
BstNI	CCWGG	5 cut(s)	291, 576, 915, 1035, 1203
BstNSI	RCATGY	1 cut(s)	709
BstPI	GGTNACC	1 cut(s)	635
BstSCI	CCNGG	5 cut(s)	289, 574, 913, 1033, 1201
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	2 cut(s)	241, 766
BstV1I	GCAGC	6 cut(s)	268, 336, 847, 1003, 1025, 1079
BstX2I	RGATCY	2 cut(s)	166, 1037
BstXI	CCANNNNNNTGG	2 cut(s)	440, 647
BstYI	RGATCY	2 cut(s)	166, 1037
Bsu15I	ATCGAT	1 cut(s)	210
BsuI	GTATCC	2 cut(s)	965, 1223
BsuRI	GGCC	4 cut(s)	239, 402, 588, 909
BsuTUI	ATCGAT	1 cut(s)	210
BtgI	CCRYGG	1 cut(s)	594
BtsCI	GGATG	1 cut(s)	1124
BtsI	GCAGTG	2 cut(s)	1015, 1384
BtsIMutI	CAGTG	5 cut(s)	477, 720, 1015, 1117, 1384
BveI	ACCTGC	2 cut(s)	1054, 1259
Cac8I	GCNNGC	1 cut(s)	1352
CaiI	CAGNNNCTG	2 cut(s)	860, 1073
CciI	TCATGA	1 cut(s)	517
CfoI	GCGC	1 cut(s)	1343
Cfr13I	GGNCC	7 cut(s)	237, 238, 324, 851, 908, 1031, 1199
ClaI	ATCGAT	1 cut(s)	210
CsiI	ACCWGGT	1 cut(s)	913
Csp6I	GTAC	5 cut(s)	73, 703, 831, 1078, 1108
CspCI	CAANNNNNGTGG	4 cut(s)	559, 594, 1177, 1212
CviAII	CATG	6 cut(s)	404, 518, 595, 706, 933, 1346
CviQI	GTAC	5 cut(s)	73, 703, 831, 1078, 1108
DdeI	CTNAG	4 cut(s)	129, 231, 714, 1383
DpnI	GATC	4 cut(s)	12, 125, 168, 1039
DpnII	GATC	4 cut(s)	10, 123, 166, 1037
DraIII	CACNNNGTG	1 cut(s)	917
EaeI	YGGCCR	2 cut(s)	400, 586
Eam1104I	CTCTTC	2 cut(s)	366, 561
EarI	CTCTTC	2 cut(s)	366, 561
Ecl136II	GAGCTC	2 cut(s)	939, 1085
Eco130I	CCWWGG	3 cut(s)	594, 640, 989
Eco24I	GRGCYC	4 cut(s)	241, 556, 941, 1087
Eco31I	GGTCTC	1 cut(s)	127
Eco32I	GATATC	1 cut(s)	39
Eco47I	GGWCC	4 cut(s)	324, 851, 1031, 1199
Eco53kI	GAGCTC	2 cut(s)	939, 1085
Eco57I	CTGAAG	4 cut(s)	61, 86, 176, 501
Eco91I	GGTNACC	1 cut(s)	635
EcoICRI	GAGCTC	2 cut(s)	939, 1085
EcoO109I	RGGNCCY	2 cut(s)	237, 238
EcoO65I	GGTNACC	1 cut(s)	635
EcoRII	CCWGG	5 cut(s)	289, 574, 913, 1033, 1201
EcoRV	GATATC	1 cut(s)	39
EcoT14I	CCWWGG	3 cut(s)	594, 640, 989
EcoT22I	ATGCAT	2 cut(s)	676, 1126
EcoT38I	GRGCYC	4 cut(s)	241, 556, 941, 1087
ErhI	CCWWGG	3 cut(s)	594, 640, 989
Esp3I	CGTCTC	1 cut(s)	41
FaeI	CATG	6 cut(s)	407, 521, 598, 709, 936, 1349
FalI	AAGNNNNNCTT	2 cut(s)	59, 91
FaqI	GGGAC	1 cut(s)	1163
FatI	CATG	6 cut(s)	403, 517, 594, 705, 932, 1345
FauI	CCCGC	3 cut(s)	26, 958, 1343
FauNDI	CATATG	2 cut(s)	676, 1147
FokI	GGATG	1 cut(s)	1111
FriOI	GRGCYC	4 cut(s)	241, 556, 941, 1087
FspBI	CTAG	2 cut(s)	924, 1062
GlaI	GCGC	1 cut(s)	1342
GsaI	CCCAGC	2 cut(s)	1077, 1402
HaeII	RGCGCY	1 cut(s)	1344
HaeIII	GGCC	4 cut(s)	239, 402, 588, 909
HhaI	GCGC	1 cut(s)	1343
Hin1I	GRCGYC	1 cut(s)	50
Hin1II	CATG	6 cut(s)	407, 521, 598, 709, 936, 1349
Hin6I	GCGC	1 cut(s)	1341
HinP1I	GCGC	1 cut(s)	1341
HindIII	AAGCTT	3 cut(s)	20, 393, 1308
HinfI	GANTC	3 cut(s)	5, 692, 1253
HphI	GGTGA	1 cut(s)	1130
Hpy166II	GTNNAC	1 cut(s)	764
Hpy188I	TCNGA	6 cut(s)	10, 55, 132, 272, 717, 1238
Hpy188III	TCNNGA	5 cut(s)	179, 194, 246, 518, 1314
Hpy8I	GTNNAC	1 cut(s)	764
Hpy99I	CGWCG	3 cut(s)	55, 95, 158
HpyAV	CCTTC	2 cut(s)	61, 795
HpyCH4III	ACNGT	3 cut(s)	106, 223, 1112
HpyCH4IV	ACGT	2 cut(s)	50, 93
HpyF10VI	GCNNNNNNNGC	8 cut(s)	87, 236, 863, 890, 1151, 1340, 1347, 1394
HpyF3I	CTNAG	4 cut(s)	129, 231, 714, 1383
HpySE526I	ACGT	2 cut(s)	50, 93
Hsp92I	GRCGYC	1 cut(s)	50
Hsp92II	CATG	6 cut(s)	407, 521, 598, 709, 936, 1349
HspAI	GCGC	1 cut(s)	1341
KpnI	GGTACC	1 cut(s)	834
Kzo9I	GATC	4 cut(s)	10, 123, 166, 1037
LguI	GCTCTTC	1 cut(s)	561
LmnI	GCTCC	8 cut(s)	253, 787, 925, 936, 944, 991, 1082, 1210
Lsp1109I	GCAGC	6 cut(s)	268, 336, 847, 1003, 1025, 1079
LweI	GCATC	5 cut(s)	475, 556, 632, 1111, 1133
MabI	ACCWGGT	1 cut(s)	913
MaeI	CTAG	2 cut(s)	924, 1062
MaeII	ACGT	2 cut(s)	50, 93
MaeIII	GTNAC	2 cut(s)	406, 635
MalI	GATC	4 cut(s)	12, 125, 168, 1039
MbiI	CCGCTC	1 cut(s)	986
MboI	GATC	4 cut(s)	10, 123, 166, 1037
MboII	GAAGA	7 cut(s)	182, 343, 380, 383, 494, 548, 741
MflI	RGATCY	2 cut(s)	166, 1037
MhlI	GDGCHC	8 cut(s)	241, 556, 722, 766, 922, 941, 1087, 1384
MlsI	TGGCCA	1 cut(s)	402
MluCI	AATT	2 cut(s)	82, 1279
MluNI	TGGCCA	1 cut(s)	402
MlyI	GAGTC	2 cut(s)	686, 1247
MmeI	TCCRAC	3 cut(s)	33, 1138, 1268
Mox20I	TGGCCA	1 cut(s)	402
Mph1103I	ATGCAT	2 cut(s)	676, 1126
MroXI	GAANNNNTTC	1 cut(s)	23
MscI	TGGCCA	1 cut(s)	402
MseI	TTAA	1 cut(s)	524
Msp20I	TGGCCA	1 cut(s)	402
MspA1I	CMGCKG	3 cut(s)	860, 1016, 1070
MspR9I	CCNGG	5 cut(s)	291, 576, 915, 1035, 1203
MvaI	CCWGG	5 cut(s)	291, 576, 915, 1035, 1203
MwoI	GCNNNNNNNGC	8 cut(s)	87, 236, 863, 890, 1151, 1340, 1347, 1394
NcoI	CCATGG	1 cut(s)	594
NdeI	CATATG	2 cut(s)	676, 1147
NdeII	GATC	4 cut(s)	10, 123, 166, 1037
NlaIII	CATG	6 cut(s)	407, 521, 598, 709, 936, 1349
NlaIV	GGNNCC	4 cut(s)	168, 239, 665, 832
NsiI	ATGCAT	2 cut(s)	676, 1126
NspI	RCATGY	1 cut(s)	709
PagI	TCATGA	1 cut(s)	517
PaqCI	CACCTGC	1 cut(s)	1054
PciSI	GCTCTTC	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PdmI	GAANNNNTTC	1 cut(s)	23
PfeI	GAWTC	1 cut(s)	5
PflMI	CCANNNNNTGG	1 cut(s)	893
PfoI	TCCNGGA	1 cut(s)	1033
PleI	GAGTC	2 cut(s)	686, 1247
PpsI	GAGTC	2 cut(s)	686, 1247
Psp124BI	GAGCTC	2 cut(s)	941, 1087
Psp6I	CCWGG	5 cut(s)	289, 574, 913, 1033, 1201
PspEI	GGTNACC	1 cut(s)	635
PspFI	CCCAGC	2 cut(s)	1073, 1398
PspGI	CCWGG	5 cut(s)	289, 574, 913, 1033, 1201
PspN4I	GGNNCC	4 cut(s)	168, 239, 665, 832
PspOMI	GGGCCC	1 cut(s)	237
PspPI	GGNCC	7 cut(s)	237, 238, 324, 851, 908, 1031, 1199
PstI	CTGCAG	1 cut(s)	1021
PstNI	CAGNNNCTG	2 cut(s)	860, 1073
PsuI	RGATCY	2 cut(s)	166, 1037
PvuII	CAGCTG	1 cut(s)	1016
RsaI	GTAC	5 cut(s)	74, 704, 832, 1079, 1109
RsaNI	GTAC	5 cut(s)	73, 703, 831, 1078, 1108
SacI	GAGCTC	2 cut(s)	941, 1087
SapI	GCTCTTC	1 cut(s)	561
SaqAI	TTAA	1 cut(s)	524
Sau3AI	GATC	4 cut(s)	10, 123, 166, 1037
Sau96I	GGNCC	7 cut(s)	237, 238, 324, 851, 908, 1031, 1199
ScaI	AGTACT	1 cut(s)	74
SchI	GAGTC	2 cut(s)	686, 1247
ScrFI	CCNGG	5 cut(s)	291, 576, 915, 1035, 1203
SduI	GDGCHC	8 cut(s)	241, 556, 722, 766, 922, 941, 1087, 1384
SexAI	ACCWGGT	1 cut(s)	913
SfaNI	GCATC	5 cut(s)	475, 556, 632, 1111, 1133
SfcI	CTRYAG	1 cut(s)	1017
SinI	GGWCC	4 cut(s)	324, 851, 1031, 1199
SmlI	CTYRAG	2 cut(s)	244, 1086
SmoI	CTYRAG	2 cut(s)	244, 1086
Sse9I	AATT	2 cut(s)	82, 1279
SspI	AATATT	1 cut(s)	386
SspMI	CTAG	2 cut(s)	924, 1062
SstI	GAGCTC	2 cut(s)	941, 1087
StyD4I	CCNGG	5 cut(s)	289, 574, 913, 1033, 1201
StyI	CCWWGG	3 cut(s)	594, 640, 989
TaaI	ACNGT	3 cut(s)	106, 223, 1112
TaiI	ACGT	2 cut(s)	53, 96
TaqI	TCGA	3 cut(s)	210, 685, 695
TasI	AATT	2 cut(s)	82, 1279
TatI	WGTACW	1 cut(s)	72
TauI	GCSGC	4 cut(s)	860, 866, 1008, 1073
TfiI	GAWTC	1 cut(s)	5
Tru1I	TTAA	1 cut(s)	524
Tru9I	TTAA	1 cut(s)	524
TscAI	CASTG	5 cut(s)	484, 727, 1015, 1117, 1384
TseI	GCWGC	7 cut(s)	256, 349, 860, 1013, 1016, 1067, 1402
TspDTI	ATGAA	5 cut(s)	16, 381, 459, 506, 921
TspGWI	ACGGA	2 cut(s)	368, 1095
TspRI	CASTG	5 cut(s)	484, 727, 1015, 1117, 1384
Van91I	CCANNNNNTGG	1 cut(s)	893
VneI	GTGCAC	1 cut(s)	762
VpaK11BI	GGWCC	4 cut(s)	324, 851, 1031, 1199
XapI	RAATTY	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	709
XmnI	GAANNNNTTC	1 cut(s)	23
XspI	CTAG	2 cut(s)	924, 1062
ZraI	GACGTC	1 cut(s)	51
ZrmI	AGTACT	1 cut(s)	74
Zsp2I	ATGCAT	2 cut(s)	676, 1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.