Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002787

Physical Location & Seq

Genomic Coordinates Reverse (-)

20712546 .. 20715365

Gene Structure 2820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00181660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGACTCCGACGAGAGCAAGCTCTTCATAGGCGGACTAGCCTGGGACACCACCGAGGAGAAGCTCACTGAATACTTCAACCAGTACGGTGACGTCAGCCAGTCCGTCATCATGCGCGACAAGACCACCGGCCGCCCCCGCGGCTTCGGCTTCGTCGTCTTCTCTGATCCTGCCGTCCTCGACAGGGTCCTCAACGACAAGCACACCATCGACGGCCGAGCGGTGGAAGCAAAGAAGGCTTTATCAAGAGAAGAACAGCAAACTTCCAATAGAACTGGAAATTTTAATGCCACTAGAAGCTCTGGAGGTGGAGGAAATTTTAAGACCAAGAAAATATTTGTTGGAGGATTGCCTTCCACACTGACAGAAGACGGATTTCGTCAATTCTTTGAGGAGTACGGCAGTGTTACTGATGTAGTAATAATGTACGACCAGAATACTCAACGACCTCGAGGATTTGGTTTCATTACTTTTGACACTGAAGATGCAGTTGATAGAGTACTACAAAAGAACTTCCACGAGTTGAATGGTAAACTTGTAGAAGTAAAACGAGCGCTTCCCAAAGATGCAAACCCTGGCGGTGGAGGTCGTGGTGGGGGCTATCAAAGTTACAGCGCCTCTGGTGCCAGTTCCAATGCATTTGATGGCCGAATGGATGGCAATAGATATATGCAGCCTCAGTCTACGGCAGGTGGTTTCCCTCCGTATTCTGGTTATGGCGCCGCAGGTTATGGTTACAGTGGGAATACTGGTGTTGGTTATGGAGGTTATGGAAGTTACGGTGTTGGTGGTTATGGAAGTGCCAATTCTGGTTTTGGTGGTCCTGCAGGATCATATGGAAATCCAAATGCCCCTAATGCTGGTTATGTTGGTGGGACACCCGGTGCCTTGAAAAATGCTTGGAGCAGCCAAAGTCCCTCTGGCTATGGTGCTTCAGGCTATGGAGCTGCGGCTTCTTGGGCTGCTCCAGGTGGAAGTGCTCCTTCTGCTCCCAGAGGTCAATCCCCTAGTGGGGTTTCTGGTTATGGAAATCAAGGTTACGGGTATGGCAATTATGGAGGAAGTTACGGTTCTTTTCCTGGTGTGTATGGGACTTCTGGTGGACGTGGTGGAAGCACCCCAACTAGCAACAGTGGTGGTGGAGACCAACAAGGAACGCGAGGTGGCTACATGGGAAGTGTGTATGGCGACACAAATGGAAATGCAGGATATTCTAGTGCATCATGGAGAGCAGACCCTTCACAAGCCAGCGGTGGTTATGGTAGTTCTCAGTCCAGGCAGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0008187 GO:0008266 GO:0031974 GO:0031981 GO:0032991 GO:0034046 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0070717 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

428

Amino Acids

44.07

Weight (kDa)

7.7

Isoelectric Point (pI)

31.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_7	PF16367	6 - 68	2.6e-06	RNA recognition motif
RRM_1	PF00076	8 - 75	5.6e-16	RNA recognition motif
RRM_7	PF16367	110 - 177	1e-06	RNA recognition motif
RRM_1	PF00076	112 - 179	4.4e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14300 AT4G14300
fragaria_vesca	FvH4_2g20810 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320
malus_domestica	MD05G1191700.v1.1 MD13G1219200.v1.1 MD16G1224500.v1.1
prunus_persica	Prupe.1G045900_v2.0.a1 Prupe.1G045900_v2.0.a1 Prupe.8G218100_v2.0.a1
pyrus_communis	pycom05g17830 pycom05g17870 pycom10g15490 pycom13g19410 pycom16g18790
rosa_chinensis	RchiOBHm_Chr4g0394771 RchiOBHm_Chr6g0287221
rosa_laevigata	RLG00000009663 RLG00000012517
rosa_multiflora	Rmu_sc0005297.1_g000024 Rmu_sc0005356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00339810 Rroxscaffold_7G00181660
rosa_rugosa	Rorug03G0361600.1 Rorug06G0185900
rosa_samantha	Rh4AG055000 Rh4BG052900 Rh4CG059700 Rh4DG051400 Rh6AG297400 Rh6BG302800 Rh6CG307300 Rh6CG310700 Rh6DG294400
rosa_wichuraiana	Rw4G004390 Rw6G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	680
AatII	GACGTC	1 cut(s)	96
AbsI	CCTCGAGG	1 cut(s)	450
Acc36I	ACCTGC	2 cut(s)	680, 716
AccB1I	GGYRCC	3 cut(s)	623, 719, 884
AccBSI	CCGCTC	1 cut(s)	221
AccI	GTMKAC	1 cut(s)	683
AccII	CGCG	3 cut(s)	117, 141, 1159
AciI	CCGC	9 cut(s)	33, 133, 139, 141, 221, 579, 723, 950, 1251
AclWI	GGATC	2 cut(s)	161, 838
AcoI	YGGCCR	3 cut(s)	130, 214, 646
AcsI	RAATTY	2 cut(s)	280, 316
AcuI	CTGAAG	2 cut(s)	501, 918
AcyI	GRCGYC	2 cut(s)	93, 720
AdeI	CACNNNGTG	1 cut(s)	884
AfaI	GTAC	4 cut(s)	86, 398, 428, 501
AfeI	AGCGCT	1 cut(s)	555
AfiI	CCNNNNNNNGG	7 cut(s)	184, 223, 581, 710, 860, 1011, 1012
AgsI	TTSAA	3 cut(s)	79, 526, 892
AjiI	CACGTC	1 cut(s)	1106
AjnI	CCWGG	5 cut(s)	41, 574, 967, 1078, 1274
AluBI	AGCT	4 cut(s)	22, 64, 300, 947
AluI	AGCT	4 cut(s)	22, 64, 300, 947
Alw21I	GWGCWC	1 cut(s)	982
Alw26I	GTCTC	1 cut(s)	1137
AlwI	GGATC	2 cut(s)	161, 838
Ama87I	CYCGRG	1 cut(s)	450
Aor51HI	AGCGCT	1 cut(s)	555
AoxI	GGCC	3 cut(s)	130, 214, 646
ApeKI	GCWGC	4 cut(s)	673, 906, 947, 962
ApoI	RAATTY	2 cut(s)	280, 316
AspLEI	GCGC	4 cut(s)	117, 556, 617, 722
AspS9I	GGNCC	2 cut(s)	187, 821
AsuC2I	CCSGG	1 cut(s)	882
AsuHPI	GGTGA	1 cut(s)	101
AvaI	CYCGRG	1 cut(s)	450
AvaII	GGWCC	2 cut(s)	187, 821
BanI	GGYRCC	3 cut(s)	623, 719, 884
BauI	CACGAG	1 cut(s)	518
BbsI	GAAGAC	2 cut(s)	151, 375
Bbv12I	GWGCWC	1 cut(s)	982
BbvI	GCAGC	4 cut(s)	685, 918, 934, 949
BccI	CCATC	3 cut(s)	215, 638, 650
BceAI	ACGGC	4 cut(s)	158, 229, 415, 702
BciT130I	CCWGG	5 cut(s)	43, 576, 969, 1080, 1276
BcnI	CCSGG	1 cut(s)	882
BcoDI	GTCTC	1 cut(s)	1137
BfaI	CTAG	5 cut(s)	38, 294, 1008, 1125, 1215
BfmI	CTRYAG	1 cut(s)	825
BfoI	RGCGCY	3 cut(s)	557, 618, 723
BfuAI	ACCTGC	2 cut(s)	680, 716
BglI	GCCNNNNNGGC	1 cut(s)	141
BisI	GCNGC	8 cut(s)	133, 142, 674, 723, 907, 948, 951, 963
BlsI	GCNGC	8 cut(s)	134, 143, 675, 724, 908, 949, 952, 964
BmcAI	AGTACT	1 cut(s)	501
Bme1390I	CCNGG	6 cut(s)	43, 576, 882, 969, 1080, 1276
Bme18I	GGWCC	2 cut(s)	187, 821
BmeT110I	CYCGRG	1 cut(s)	450
BmgBI	CACGTC	1 cut(s)	1106
BmgT120I	GGNCC	2 cut(s)	187, 821
BmiI	GGNNCC	4 cut(s)	188, 625, 721, 886
BmrFI	CCNGG	6 cut(s)	43, 576, 882, 969, 1080, 1276
BmsI	GCATC	3 cut(s)	475, 556, 1229
BpiI	GAAGAC	2 cut(s)	151, 375
BpmI	CTGGAG	2 cut(s)	324, 951
BpuMI	CCSGG	1 cut(s)	882
BsaHI	GRCGYC	2 cut(s)	93, 720
BsaI	GGTCTC	1 cut(s)	1137
BsaJI	CCNNGG	4 cut(s)	42, 54, 139, 574
Bsc4I	CCNNNNNNNGG	7 cut(s)	184, 223, 581, 710, 860, 1011, 1012
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	5 cut(s)	82, 100, 280, 627, 754
BseBI	CCWGG	5 cut(s)	43, 576, 969, 1080, 1276
BseDI	CCNNGG	4 cut(s)	42, 54, 139, 574
BseGI	GGATG	1 cut(s)	661
BseLI	CCNNNNNNNGG	7 cut(s)	184, 223, 581, 710, 860, 1011, 1012
BseMII	CTCAG	2 cut(s)	692, 1283
BseNI	ACTGG	5 cut(s)	82, 100, 280, 627, 754
BseRI	GAGGAG	2 cut(s)	71, 407
BseX3I	CGGCCG	2 cut(s)	130, 214
BseXI	GCAGC	4 cut(s)	685, 918, 934, 949
Bsh1236I	CGCG	3 cut(s)	117, 141, 1159
Bsh1285I	CGRYCG	2 cut(s)	133, 217
BshFI	GGCC	3 cut(s)	132, 216, 648
BshNI	GGYRCC	3 cut(s)	623, 719, 884
BsiEI	CGRYCG	2 cut(s)	133, 217
BsiHKAI	GWGCWC	1 cut(s)	982
BsiHKCI	CYCGRG	1 cut(s)	450
BsiSI	CCGG	2 cut(s)	129, 882
BslFI	GGGAC	4 cut(s)	59, 889, 900, 1105
BslI	CCNNNNNNNGG	7 cut(s)	184, 223, 581, 710, 860, 1011, 1012
BsmAI	GTCTC	1 cut(s)	1137
BsmFI	GGGAC	4 cut(s)	59, 889, 900, 1105
BsnI	GGCC	3 cut(s)	132, 216, 648
Bso31I	GGTCTC	1 cut(s)	1137
BsoBI	CYCGRG	1 cut(s)	450
Bsp1286I	GDGCHC	1 cut(s)	982
Bsp143I	GATC	2 cut(s)	166, 830
BspACI	CCGC	9 cut(s)	33, 133, 139, 141, 221, 579, 723, 950, 1251
BspANI	GGCC	3 cut(s)	132, 216, 648
BspCNI	CTCAG	2 cut(s)	691, 1282
BspFNI	CGCG	3 cut(s)	117, 141, 1159
BspLI	GGNNCC	4 cut(s)	188, 625, 721, 886
BspMAI	CTGCAG	1 cut(s)	829
BspMI	ACCTGC	2 cut(s)	680, 716
BspPI	GGATC	2 cut(s)	161, 838
BspQI	GCTCTTC	1 cut(s)	29
BspT107I	GGYRCC	3 cut(s)	623, 719, 884
BspTNI	GGTCTC	1 cut(s)	1137
BsrBI	CCGCTC	1 cut(s)	221
BsrFI	RCCGGY	1 cut(s)	128
BsrI	ACTGG	5 cut(s)	82, 100, 280, 627, 754
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	4 cut(s)	42, 54, 139, 574
BssMI	GATC	2 cut(s)	166, 830
BssNI	GRCGYC	2 cut(s)	93, 720
BssSI	CACGAG	1 cut(s)	518
Bst2BI	CACGAG	1 cut(s)	518
Bst2UI	CCWGG	5 cut(s)	43, 576, 969, 1080, 1276
Bst4CI	ACNGT	5 cut(s)	89, 740, 782, 1070, 1133
Bst6I	CTCTTC	1 cut(s)	29
BstACI	GRCGYC	2 cut(s)	93, 720
BstC8I	GCNNGC	2 cut(s)	20, 1249
BstDEI	CTNAG	2 cut(s)	678, 1269
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	1 cut(s)	661
BstFNI	CGCG	3 cut(s)	117, 141, 1159
BstH2I	RGCGCY	3 cut(s)	557, 618, 723
BstHHI	GCGC	4 cut(s)	117, 556, 617, 722
BstKTI	GATC	2 cut(s)	169, 833
BstMAI	GTCTC	1 cut(s)	1137
BstMBI	GATC	2 cut(s)	166, 830
BstMCI	CGRYCG	2 cut(s)	133, 217
BstMWI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 227, 236, 623, 857, 959, 986
BstNI	CCWGG	5 cut(s)	43, 576, 969, 1080, 1276
BstSCI	CCNGG	6 cut(s)	41, 574, 880, 967, 1078, 1274
BstSFI	CTRYAG	1 cut(s)	825
BstUI	CGCG	3 cut(s)	117, 141, 1159
BstV1I	GCAGC	4 cut(s)	685, 918, 934, 949
BstV2I	GAAGAC	2 cut(s)	151, 375
BstZI	CGGCCG	2 cut(s)	130, 214
BsuRI	GGCC	3 cut(s)	132, 216, 648
BtgI	CCRYGG	1 cut(s)	139
BtrI	CACGTC	1 cut(s)	1106
BtsCI	GGATG	1 cut(s)	661
BtsI	GCAGTG	1 cut(s)	409
BtsIMutI	CAGTG	6 cut(s)	66, 359, 409, 477, 745, 1138
BveI	ACCTGC	2 cut(s)	680, 716
Cac8I	GCNNGC	2 cut(s)	20, 1249
CfoI	GCGC	4 cut(s)	117, 556, 617, 722
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	2 cut(s)	187, 821
Cfr42I	CCGCGG	1 cut(s)	142
Csp6I	GTAC	4 cut(s)	85, 397, 427, 500
CspCI	CAANNNNNGTGG	2 cut(s)	1117, 1152
CviAII	CATG	3 cut(s)	112, 1171, 1224
CviQI	GTAC	4 cut(s)	85, 397, 427, 500
DdeI	CTNAG	2 cut(s)	678, 1269
DinI	GGCGCC	1 cut(s)	721
DpnI	GATC	2 cut(s)	168, 832
DpnII	GATC	2 cut(s)	166, 830
DraIII	CACNNNGTG	1 cut(s)	884
EaeI	YGGCCR	3 cut(s)	130, 214, 646
EagI	CGGCCG	2 cut(s)	130, 214
Eam1104I	CTCTTC	1 cut(s)	29
EarI	CTCTTC	1 cut(s)	29
EciI	GGCGGA	1 cut(s)	48
EclXI	CGGCCG	2 cut(s)	130, 214
Eco31I	GGTCTC	1 cut(s)	1137
Eco47I	GGWCC	2 cut(s)	187, 821
Eco47III	AGCGCT	1 cut(s)	555
Eco52I	CGGCCG	2 cut(s)	130, 214
Eco57I	CTGAAG	2 cut(s)	501, 918
Eco88I	CYCGRG	1 cut(s)	450
EcoO109I	RGGNCCY	1 cut(s)	187
EcoRII	CCWGG	5 cut(s)	41, 574, 967, 1078, 1274
EcoT22I	ATGCAT	1 cut(s)	640
EgeI	GGCGCC	1 cut(s)	721
EheI	GGCGCC	1 cut(s)	721
FaeI	CATG	3 cut(s)	115, 1174, 1227
FalI	AAGNNNNNCTT	2 cut(s)	967, 999
FaqI	GGGAC	4 cut(s)	59, 889, 900, 1105
FatI	CATG	3 cut(s)	111, 1170, 1223
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	835
FblI	GTMKAC	1 cut(s)	683
Fnu4HI	GCNGC	8 cut(s)	133, 142, 674, 723, 907, 948, 951, 963
FokI	GGATG	1 cut(s)	668
Fsp4HI	GCNGC	8 cut(s)	133, 142, 674, 723, 907, 948, 951, 963
FspBI	CTAG	5 cut(s)	38, 294, 1008, 1125, 1215
GlaI	GCGC	4 cut(s)	116, 555, 616, 721
GluI	GCNGC	8 cut(s)	133, 142, 674, 723, 907, 948, 951, 963
GsuI	CTGGAG	2 cut(s)	324, 951
HaeII	RGCGCY	3 cut(s)	557, 618, 723
HaeIII	GGCC	3 cut(s)	132, 216, 648
HapII	CCGG	2 cut(s)	129, 882
HhaI	GCGC	4 cut(s)	117, 556, 617, 722
Hin1I	GRCGYC	2 cut(s)	93, 720
Hin1II	CATG	3 cut(s)	115, 1174, 1227
Hin6I	GCGC	4 cut(s)	115, 554, 615, 720
HinP1I	GCGC	4 cut(s)	115, 554, 615, 720
HinfI	GANTC	1 cut(s)	5
HpaII	CCGG	2 cut(s)	129, 882
HphI	GGTGA	1 cut(s)	101
Hpy166II	GTNNAC	3 cut(s)	533, 684, 1103
Hpy188I	TCNGA	2 cut(s)	10, 166
Hpy188III	TCNNGA	2 cut(s)	246, 303
Hpy8I	GTNNAC	3 cut(s)	533, 684, 1103
Hpy99I	CGWCG	3 cut(s)	14, 158, 215
HpyAV	CCTTC	4 cut(s)	229, 363, 993, 1248
HpyCH4III	ACNGT	5 cut(s)	89, 740, 782, 1070, 1133
HpyCH4IV	ACGT	2 cut(s)	93, 1105
HpyCH4V	TGCA	7 cut(s)	488, 569, 638, 673, 827, 1205, 1220
HpyF10VI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 227, 236, 623, 857, 959, 986
HpyF3I	CTNAG	2 cut(s)	678, 1269
HpySE526I	ACGT	2 cut(s)	93, 1105
Hsp92I	GRCGYC	2 cut(s)	93, 720
Hsp92II	CATG	3 cut(s)	115, 1174, 1227
HspAI	GCGC	4 cut(s)	115, 554, 615, 720
KasI	GGCGCC	1 cut(s)	719
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	2 cut(s)	166, 830
LguI	GCTCTTC	1 cut(s)	29
LmnI	GCTCC	5 cut(s)	903, 944, 970, 985, 994
Lsp1109I	GCAGC	4 cut(s)	685, 918, 934, 949
LweI	GCATC	3 cut(s)	475, 556, 1229
MaeI	CTAG	5 cut(s)	38, 294, 1008, 1125, 1215
MaeII	ACGT	2 cut(s)	93, 1105
MaeIII	GTNAC	7 cut(s)	89, 406, 608, 734, 776, 1037, 1064
MalI	GATC	2 cut(s)	168, 832
MbiI	CCGCTC	1 cut(s)	221
MboI	GATC	2 cut(s)	166, 830
MboII	GAAGA	5 cut(s)	16, 151, 263, 380, 494
MhlI	GDGCHC	1 cut(s)	982
MluCI	AATT	5 cut(s)	280, 316, 383, 805, 1051
Mly113I	GGCGCC	1 cut(s)	720
MmeI	TCCRAC	2 cut(s)	33, 322
Mph1103I	ATGCAT	1 cut(s)	640
MseI	TTAA	3 cut(s)	285, 321, 1285
MspA1I	CMGCKG	2 cut(s)	141, 1251
MspI	CCGG	2 cut(s)	129, 882
MspR9I	CCNGG	6 cut(s)	43, 576, 882, 969, 1080, 1276
MvaI	CCWGG	5 cut(s)	43, 576, 969, 1080, 1276
MvnI	CGCG	3 cut(s)	117, 141, 1159
MwoI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 227, 236, 623, 857, 959, 986
NarI	GGCGCC	1 cut(s)	720
NciI	CCSGG	1 cut(s)	882
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	2 cut(s)	166, 830
NlaIII	CATG	3 cut(s)	115, 1174, 1227
NlaIV	GGNNCC	4 cut(s)	188, 625, 721, 886
NmeAIII	GCCGAG	1 cut(s)	242
NmuCI	GTSAC	1 cut(s)	89
NsiI	ATGCAT	1 cut(s)	640
PaeR7I	CTCGAG	1 cut(s)	450
PaqCI	CACCTGC	1 cut(s)	680
PciSI	GCTCTTC	1 cut(s)	29
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PflFI	GACNNNGTC	1 cut(s)	185
PkrI	GCNGC	8 cut(s)	134, 143, 675, 724, 908, 949, 952, 964
PluTI	GGCGCC	1 cut(s)	723
PpuMI	RGGWCCY	1 cut(s)	187
Psp5II	RGGWCCY	1 cut(s)	187
Psp6I	CCWGG	5 cut(s)	41, 574, 967, 1078, 1274
PspGI	CCWGG	5 cut(s)	41, 574, 967, 1078, 1274
PspN4I	GGNNCC	4 cut(s)	188, 625, 721, 886
PspPI	GGNCC	2 cut(s)	187, 821
PspPPI	RGGWCCY	1 cut(s)	187
PspXI	VCTCGAGB	1 cut(s)	450
PstI	CTGCAG	1 cut(s)	829
PsyI	GACNNNGTC	1 cut(s)	185
RsaI	GTAC	4 cut(s)	86, 398, 428, 501
RsaNI	GTAC	4 cut(s)	85, 397, 427, 500
SacII	CCGCGG	1 cut(s)	142
SapI	GCTCTTC	1 cut(s)	29
SaqAI	TTAA	3 cut(s)	285, 321, 1285
SatI	GCNGC	8 cut(s)	133, 142, 674, 723, 907, 948, 951, 963
Sau3AI	GATC	2 cut(s)	166, 830
Sau96I	GGNCC	2 cut(s)	187, 821
SbfI	CCTGCAGG	1 cut(s)	829
ScaI	AGTACT	1 cut(s)	501
ScrFI	CCNGG	6 cut(s)	43, 576, 882, 969, 1080, 1276
SdaI	CCTGCAGG	1 cut(s)	829
SduI	GDGCHC	1 cut(s)	982
SfaNI	GCATC	3 cut(s)	475, 556, 1229
SfcI	CTRYAG	1 cut(s)	825
SfoI	GGCGCC	1 cut(s)	721
Sfr274I	CTCGAG	1 cut(s)	450
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	2 cut(s)	187, 821
SlaI	CTCGAG	1 cut(s)	450
SmlI	CTYRAG	1 cut(s)	450
SmoI	CTYRAG	1 cut(s)	450
Sse8387I	CCTGCAGG	1 cut(s)	829
Sse9I	AATT	5 cut(s)	280, 316, 383, 805, 1051
SsiI	CCGC	9 cut(s)	33, 133, 139, 141, 221, 579, 723, 950, 1251
SspDI	GGCGCC	1 cut(s)	719
SspI	AATATT	1 cut(s)	336
SspMI	CTAG	5 cut(s)	38, 294, 1008, 1125, 1215
StyD4I	CCNGG	6 cut(s)	41, 574, 880, 967, 1078, 1274
TaaI	ACNGT	5 cut(s)	89, 740, 782, 1070, 1133
TaiI	ACGT	2 cut(s)	96, 1108
TaqI	TCGA	3 cut(s)	180, 210, 451
TasI	AATT	5 cut(s)	280, 316, 383, 805, 1051
TatI	WGTACW	1 cut(s)	499
TauI	GCSGC	4 cut(s)	135, 144, 725, 953
Tru1I	TTAA	3 cut(s)	285, 321, 1285
Tru9I	TTAA	3 cut(s)	285, 321, 1285
TscAI	CASTG	6 cut(s)	73, 366, 409, 484, 745, 1138
TseFI	GTSAC	1 cut(s)	89
TseI	GCWGC	4 cut(s)	673, 906, 947, 962
Tsp45I	GTSAC	1 cut(s)	89
TspDTI	ATGAA	2 cut(s)	16, 454
TspGWI	ACGGA	3 cut(s)	94, 387, 693
TspRI	CASTG	6 cut(s)	73, 366, 409, 484, 745, 1138
Tth111I	GACNNNGTC	1 cut(s)	185
VpaK11BI	GGWCC	2 cut(s)	187, 821
XapI	RAATTY	2 cut(s)	280, 316
XcmI	CCANNNNNNNNNTGG	2 cut(s)	524, 917
XhoI	CTCGAG	1 cut(s)	450
XmiI	GTMKAC	1 cut(s)	683
XspI	CTAG	5 cut(s)	38, 294, 1008, 1125, 1215
ZraI	GACGTC	1 cut(s)	94
ZrmI	AGTACT	1 cut(s)	501
Zsp2I	ATGCAT	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.